Pregenerated sensors for LINC01345 (Homo sapiens)
Ensembl gene IDs: ENSG00000226374Ensembl transcript IDs: ENST00000425194.2, ENST00000635127.1, ENST00000635247.1, ENST00000671015.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCACAGTGTGGAGTTCACTGTTCTGTGGCTCTGGGCCTTTGTGTCTaGGCGCCCGTAGTCCTGAGCCCTGCACGGTGGGGAGAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: AQCGVHCSVALGLCV*APVVLSPARWGEVR Trigger: CCTCACCTCTCCCCACCGTGCAGGGCTCAGGACTACGGGCGCCCAGACACAAAGGCCCAGAGCCACAGAACAGTGAACTCCACACTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS TCA 90 bp | GCAGAGGGGAGTGCTCGGCTCCACACCTGGGCCGTGGGACCGGTGTaGGTTCAGGTAAAGCCACACGGATGGAGAAACCACTTCATACAC | + |
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Preference number: 5 (lower is better) Translates to: AEGSARLHTWAVGPV*VQVKPHGWRNHFIH Trigger: GTGTATGAAGTGGTTTCTCCATCCGTGTGGCTTTACCTGAACTCACACCGGTCCCACGGCCCAGGTGTGGAGCCGAGCACTCCCCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS TCA 90 bp | CCGAGAAGTGCACATTCCCTCCACCCGGCATCGTCATCATCGTGTTaGTCTCCTTCTGGAGCGTCCACAGCGCTCCCGACAATGCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: PRSAHSLHPASSSSC*SPSGASTALPTMRV Trigger: GACTCGCATTGTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATCAACACGATGATGACGATGCCGGGTGGAGGGAATGTGCACTTCTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 90 bp | AGAAATGGGACTCTGGTCTCTCTCCCCGCCCCTCCCGCCAACAGCTaGACAGTGTGGAGTTCACTGTTCTGTGGCTCTGGGCCTTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: RNGTLVSLPAPPANS*TVWSSLFCGSGPLC Trigger: ACACAAAGGCCCAGAGCCACAGAACAGTGAACTCCACACTGTGCAGCTGTTGGCGGGAGGGGCGGGGAGAGAGACCAGAGTCCCATTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CCA 90 bp | TCAACAGCCTCTCTGCCCCTCAGTCTTCTCCTCCGCAGAGTGGGCTaGAAGGTCAGTGCTTGCTGGAACTGTCATCTCTGTGCTCAATGG | + |
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Preference number: 5 (lower is better) Translates to: STASLPLSLLLRRVG*KVSACWNCHLCAQW Trigger: CCATTGAGCACAGAGATGACAGTTCCAGCAAGCACTGACCTTCCAGCCCACTCTGCGGAGGAGAAGACTGAGGGGCAGAGAGGCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CCA 90 bp | ACATTCCCTCCACCCGGCATCGTCATCATCGTGTTGATCTCCTTCTaGAGCGTCCACAGCGCTCCCGACAATGCGAGTCTTCCCCAAATG | + |
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Preference number: 5 (lower is better) Translates to: TFPPPGIVIIVLISF*SVHSAPDNASLPQM Trigger: CATTTGGGGAAGACTCGCATTGTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATCAACACGATGATGACGATGCCGGGTGGAGGGAATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS TCA 90 bp | AGGATGCCAGAGATCTGGAGCTTTGGCGGTGGATGGACCTGGGTGTaGGTCATGGCTCAGCCATTTGCCAGCTGTGCAAACTCAGACAAG | + |
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Preference number: 5 (lower is better) Translates to: RMPEIWSFGGGWTWV*VMAQPFASCANSDK Trigger: CTTGTCTGAGTTTGCACAGCTGGCAAATGGCTGAGCCATGACTCACACCCAGGTCCATCCACCGCCAAAGCTCCAGATCTCTGGCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 90 bp | TCTGCCCCTCAGTCTTCTCCTCCGCAGAGTGGGCTGGAAGGTCAGTaGTTGCTGGAACTGTCATCTCTGTGCTCAATGGTGATTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SAPQSSPPQSGLEGQ*LLELSSLCSMVIAV Trigger: CACTGCAATCACCATTGAGCACAGAGATGACAGTTCCAGCAAGCACTGACCTTCCAGCCCACTCTGCGGAGGAGAAGACTGAGGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 90 bp | GGGAAATTAGGGTCAGAGTCAACTGCAGCAAATCAACAGCCTCTCTaGCCCTCAGTCTTCTCCTCCGCAGAGTGGGCTGGAAGGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: GKLGSESTAANQQPL*PSVFSSAEWAGRSV Trigger: CACTGACCTTCCAGCCCACTCTGCGGAGGAGAAGACTGAGGGGCAGAGAGGCTGTTGATTTGCTGCAGTTGACTCTGACCCTAATTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 90 bp | CCTGCAGAGTCGGCTGCATCAACAAGGTGCATGGATCTGGCATGTTaGTGGCTACAAAGCCCCTTTGGTGCCTCTTCTGCACCTTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: PAESAASTRCMDLAC*WLQSPFGASSAPCC Trigger: GCAACAAGGTGCAGAAGAGGCACCAAAGGGGCTTTGTAGCCAGCAACATGCCAGATCCATGCACCTTGTTGATGCAGCCGACTCTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS GCA 90 bp | AGGTCAGTGCTTGCTGGAACTGTCATCTCTGTGCTCAATGGTGATTaGAGTGACTGGCGTGAACAGCCTTCAAACGGGTCCTTGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RSVLAGTVISVLNGD*SDWREQPSNGSLAG Trigger: CCCTGCCAAGGACCCGTTTGAAGGCTGTTCACGCCAGTCACTGCAATCACCATTGAGCACAGAGATGACAGTTCCAGCAAGCACTGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 90 bp | CTGATGAGTTTGAGTCAGCGCCGGGAAATTAGGGTCAGAGTCAACTaGAGCAAATCAACAGCCTCTCTGCCCCTCAGTCTTCTCCTCCGC | + |
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Preference number: 5 (lower is better) Translates to: LMSLSQRREIRVRVN*SKSTASLPLSLLLR Trigger: GCGGAGGAGAAGACTGAGGGGCAGAGAGGCTGTTGATTTGCTGCAGTTGACTCTGACCCTAATTTCCCGGCGCTGACTCAAACTCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CCA 90 bp | CAGAGATCTGGAGCTTTGGCGGTGGATGGACCTGGGTGTGAGTCATaGCTCAGCCATTTGCCAGCTGTGCAAACTCAGACAAGCTGCTTA | + |
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Preference number: 5 (lower is better) Translates to: QRSGALAVDGPGCES*LSHLPAVQTQTSCL Trigger: TAAGCAGCTTGTCTGAGTTTGCACAGCTGGCAAATGGCTGAGCCATGACTCACACCCAGGTCCATCCACCGCCAAAGCTCCAGATCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CCA 90 bp | CTTGCTGGAACTGTCATCTCTGTGCTCAATGGTGATTGCAGTGACTaGCGTGAACAGCCTTCAAACGGGTCCTTGGCAGGGGTGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: LAGTVISVLNGDCSD*REQPSNGSLAGVGK Trigger: CTTTCCCACCCCTGCCAAGGACCCGTTTGAAGGCTGTTCACGCCAGTCACTGCAATCACCATTGAGCACAGAGATGACAGTTCCAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 90 bp | CATCGTGTTGATCTCCTTCTGGAGCGTCCACAGCGCTCCCGACAATaGGAGTCTTCCCCAAATGGCATCTCTTTCATAAAGCGAGACACA | + |
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Preference number: 5 (lower is better) Translates to: HRVDLLLERPQRSRQ*ESSPNGISFIKRDT Trigger: TGTGTCTCGCTTTATGAAAGAGATGCCATTTGGGGAAGACTCGCATTGTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATCAACACGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CCA 90 bp | TTTCACTCCACATGCAGGGACTCTGACAGCTTGAAGGGACTGTCGTaGTGTGCAGTGAGCATGGCTTGTTTTCCACACGGCACAAAACAC | + |
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Preference number: 5 (lower is better) Translates to: FHSTCRDSDSLKGLS*CAVSMACFPHGTKH Trigger: GTGTTTTGTGCCGTGTGGAAAACAAGCCATGCTCACTGCACACCACGACAGTCCCTTCAAGCTGTCAGAGTCCCTGCATGTGGAGTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CCA 90 bp | TGTAACATGTTCCTGGAGCACTTCCTCACCGTCTGTCTCCCTAGCTaGATTATCACTCCACTCCGAGAGAGGGGTTCCAATTTGCAATTG | + |
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Preference number: 5 (lower is better) Translates to: CNMFLEHFLTVCLPS*IITPLRERGSNLQL Trigger: CAATTGCAAATTGGAACCCCTCTCTCGGAGTGGAGTGATAATCCAGCTAGGGAGACAGACGGTGAGGAAGTGCTCCAGGAACATGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS GCA 90 bp | GAAGACATAGCAACCAGGATGTGTGCTTTCTCTGAGCAGTGGCTTTaGTCTGTGGTGTCCACAGCTTGTACACTAATTTTGAGGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: EDIATRMCAFSEQWL*SVVSTACTLILRTW Trigger: CCAGGTCCTCAAAATTAGTGTACAAGCTGTGGACACCACAGAGCAAAGCCACTGCTCAGAGAAAGCACACATCCTGGTTGCTATGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671015.1 |
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| CDS CCA 90 bp | TACTGGTCTTTTCTTGATGCTGGAGACATTCAGATTATTCTTTTCTaGCTCCCGAGAAGTGCACATTCCCTCCACCCGGCATCGTCATCA | + |
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Preference number: 5 (lower is better) Translates to: YWSFLDAGDIQIILF*LPRSAHSLHPASSS Trigger: TGATGACGATGCCGGGTGGAGGGAATGTGCACTTCTCGGGAGCCAGAAAAGAATAATCTGAATGTCTCCAGCATCAAGAAAAGACCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000425194.2 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 72 bp | GGGCCTTTGTGTCTGGGCGCCCGTAGTCCTGAGCCCTaGACGGTGGGGAGAGGTGAGGGCAGAGACAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: GPLCLGARSPEP*TVGRGEGRDKS Trigger: ACTCTTGTCTCTGCCCTCACCTCTCCCCACCGTGCAGGGCTCAGGACTACGGGCGCCCAGACACAAAGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CCA 72 bp | CCTCAGCGTCCCTCCAGGAGCCCCTCAAGGTTGGAATaGCAGGCACCAGGTCCTTCCTGGAGCCTCTCGTCT | + |
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Preference number: 6 (lower is better) Translates to: PQRPSRSPSRLE*QAPGPSWSLSS Trigger: AGACGAGAGGCTCCAGGAAGGACCTGGTGCCTGCCATTCCAACCTTGAGGGGCTCCTGGAGGGACGCTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CCA 72 bp | GGAGTTCACTGTTCTGTGGCTCTGGGCCTTTGTGTCTaGGCGCCCGTAGTCCTGAGCCCTGCACGGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GVHCSVALGLCV*APVVLSPARWG Trigger: TCCCCACCGTGCAGGGCTCAGGACTACGGGCGCCCAGACACAAAGGCCCAGAGCCACAGAACAGTGAACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS GCA 72 bp | ACTCTGGTCTCTCTCCCCGCCCCTCCCGCCAACAGCTaGACAGTGTGGAGTTCACTGTTCTGTGGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: TLVSLPAPPANS*TVWSSLFCGSG Trigger: CCCAGAGCCACAGAACAGTGAACTCCACACTGTGCAGCTGTTGGCGGGAGGGGCGGGGAGAGAGACCAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CCA 72 bp | CTTGTCCTCAGCGTCCCTCCAGGAGCCCCTCAAGGTTaGAATGGCAGGCACCAGGTCCTTCCTGGAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LVLSVPPGAPQG*NGRHQVLPGAS Trigger: AGAGGCTCCAGGAAGGACCTGGTGCCTGCCATTCCAACCTTGAGGGGCTCCTGGAGGGACGCTGAGGACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CAA 90 bp | AACAGCTGCACAGTGTGGAGTTCACTGTTCTGTGGCTCTGGGCCTTaGTGTCTGGGCGCCCGTAGTCCTGAGCCCTGCACGGTGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: NSCTVWSSLFCGSGP*CLGARSPEPCTVGR Trigger: TCTCCCCACCGTGCAGGGCTCAGGACTACGGGCGCCCAGACACAAAGGCCCAGAGCCACAGAACAGTGAACTCCACACTGTGCAGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS TCA 72 bp | AGTGCTCGGCTCCACACCTGGGCCGTGGGACCGGTGTaGGTTCAGGTAAAGCCACACGGATGGAGAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: SARLHTWAVGPV*VQVKPHGWRNH Trigger: GTGGTTTCTCCATCCGTGTGGCTTTACCTGAACTCACACCGGTCCCACGGCCCAGGTGTGGAGCCGAGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 72 bp | ACAGTGTGGAGTTCACTGTTCTGTGGCTCTGGGCCTTaGTGTCTGGGCGCCCGTAGTCCTGAGCCCTGCACG | + |
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Preference number: 6 (lower is better) Translates to: TVWSSLFCGSGP*CLGARSPEPCT Trigger: CGTGCAGGGCTCAGGACTACGGGCGCCCAGACACAAAGGCCCAGAGCCACAGAACAGTGAACTCCACACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS TCA 72 bp | GCACATTCCCTCCACCCGGCATCGTCATCATCGTGTTaGTCTCCTTCTGGAGCGTCCACAGCGCTCCCGACA | + |
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Preference number: 6 (lower is better) Translates to: AHSLHPASSSSC*SPSGASTALPT Trigger: TGTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATCAACACGATGATGACGATGCCGGGTGGAGGGAATGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 72 bp | TGCACATTCCCTCCACCCGGCATCGTCATCATCGTGTaGATCTCCTTCTGGAGCGTCCACAGCGCTCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: CTFPPPGIVIIV*ISFWSVHSAPD Trigger: GTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATCAACACGATGATGACGATGCCGGGTGGAGGGAATGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 90 bp | CCCGAGAAGTGCACATTCCCTCCACCCGGCATCGTCATCATCGTGTaGATCTCCTTCTGGAGCGTCCACAGCGCTCCCGACAATGCGAGT | + |
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Preference number: 6 (lower is better) Translates to: PEKCTFPPPGIVIIV*ISFWSVHSAPDNAS Trigger: ACTCGCATTGTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATCAACACGATGATGACGATGCCGGGTGGAGGGAATGTGCACTTCTCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 72 bp | GGGTCAGAGTCAACTGCAGCAAATCAACAGCCTCTCTaGCCCTCAGTCTTCTCCTCCGCAGAGTGGGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GSESTAANQQPL*PSVFSSAEWAG Trigger: TCCAGCCCACTCTGCGGAGGAGAAGACTGAGGGGCAGAGAGGCTGTTGATTTGCTGCAGTTGACTCTGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 72 bp | GTGAGTAGGAGGCTCCTGCACCCCTGCAGAGTCGGCTaGATCAACAAGGTGCATGGATCTGGCATGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSRRLLHPCRVG*INKVHGSGMLL Trigger: CAGCAACATGCCAGATCCATGCACCTTGTTGATGCAGCCGACTCTGCAGGGGTGCAGGAGCCTCCTACTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635127.1 |
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| CDS CCA 72 bp | CCACCCGGCATCGTCATCATCGTGTTGATCTCCTTCTaGAGCGTCCACAGCGCTCCCGACAATGCGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PPGIVIIVLISF*SVHSAPDNASL Trigger: AAGACTCGCATTGTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATCAACACGATGATGACGATGCCGGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS TCA 72 bp | GAGATCTGGAGCTTTGGCGGTGGATGGACCTGGGTGTaGGTCATGGCTCAGCCATTTGCCAGCTGTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: EIWSFGGGWTWV*VMAQPFASCAN Trigger: GTTTGCACAGCTGGCAAATGGCTGAGCCATGACTCACACCCAGGTCCATCCACCGCCAAAGCTCCAGATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 72 bp | TGCTTCTCAGCGCCTTTTGAATCCAGTGATCCCTCCTaGACCCCTGCAGAGTCGGCTGCATCAACAAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: CFSAPFESSDPS*TPAESAASTRC Trigger: GCACCTTGTTGATGCAGCCGACTCTGCAGGGGTGCAGGAGGGATCACTGGATTCAAAAGGCGCTGAGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635247.1 |
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| CDS CCA 72 bp | GGAGCTTTGGCGGTGGATGGACCTGGGTGTGAGTCATaGCTCAGCCATTTGCCAGCTGTGCAAACTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: GALAVDGPGCES*LSHLPAVQTQT Trigger: TGTCTGAGTTTGCACAGCTGGCAAATGGCTGAGCCATGACTCACACCCAGGTCCATCCACCGCCAAAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CCA 72 bp | TCTCTGCCCCTCAGTCTTCTCCTCCGCAGAGTGGGCTaGAAGGTCAGTGCTTGCTGGAACTGTCATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SLPLSLLLRRVG*KVSACWNCHLC Trigger: ACAGAGATGACAGTTCCAGCAAGCACTGACCTTCCAGCCCACTCTGCGGAGGAGAAGACTGAGGGGCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 90 bp | GCCCCTCAGTCTTCTCCTCCGCAGAGTGGGCTGGAAGGTCAGTGCTaGCTGGAACTGTCATCTCTGTGCTCAATGGTGATTGCAGTGACT | + |
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Preference number: 6 (lower is better) Translates to: APQSSPPQSGLEGQC*LELSSLCSMVIAVT Trigger: AGTCACTGCAATCACCATTGAGCACAGAGATGACAGTTCCAGCAAGCACTGACCTTCCAGCCCACTCTGCGGAGGAGAAGACTGAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 90 bp | CCCTGCAGAGTCGGCTGCATCAACAAGGTGCATGGATCTGGCATGTaGCTGGCTACAAAGCCCCTTTGGTGCCTCTTCTGCACCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PCRVGCINKVHGSGM*LATKPLWCLFCTLL Trigger: CAACAAGGTGCAGAAGAGGCACCAAAGGGGCTTTGTAGCCAGCAACATGCCAGATCCATGCACCTTGTTGATGCAGCCGACTCTGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS GCA 72 bp | CAGTCTTCTCCTCCGCAGAGTGGGCTGGAAGGTCAGTaGTTGCTGGAACTGTCATCTCTGTGCTCAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: QSSPPQSGLEGQ*LLELSSLCSMV Trigger: CACCATTGAGCACAGAGATGACAGTTCCAGCAAGCACTGACCTTCCAGCCCACTCTGCGGAGGAGAAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 72 bp | TGCCTCGAACACACCAGGGCGCCTTTCATAGGCATCTaGCCCGCAGACAGCTTCACTGCTGAATTCTACCAA | + |
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Preference number: 6 (lower is better) Translates to: CLEHTRAPFIGI*PADSFTAEFYQ Trigger: TTGGTAGAATTCAGCAGTGAAGCTGTCTGCGGGGCAGATGCCTATGAAAGGCGCCCTGGTGTGTTCGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635247.1 |
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| CDS CCA 72 bp | ACATGCAGGGACTCTGACAGCTTGAAGGGACTGTCGTaGTGTGCAGTGAGCATGGCTTGTTTTCCACACGGC | + |
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Preference number: 6 (lower is better) Translates to: TCRDSDSLKGLS*CAVSMACFPHG Trigger: GCCGTGTGGAAAACAAGCCATGCTCACTGCACACCACGACAGTCCCTTCAAGCTGTCAGAGTCCCTGCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CAA 72 bp | GTCGGCTGCATCAACAAGGTGCATGGATCTGGCATGTaGCTGGCTACAAAGCCCCTTTGGTGCCTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VGCINKVHGSGM*LATKPLWCLFC Trigger: GCAGAAGAGGCACCAAAGGGGCTTTGTAGCCAGCAACATGCCAGATCCATGCACCTTGTTGATGCAGCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS GCA 72 bp | AGGGAAGGTAGATGGGGGATCAGATATCGTACAGGGTaGATGGCCCTTAGGAGTGTCTGGTCCATAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: REGRWGIRYRTG*MALRSVWSIVR Trigger: CCTCACTATGGACCAGACACTCCTAAGGGCCATGCACCCTGTACGATATCTGATCCCCCATCTACCTTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671015.1 |
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| CDS CCA 72 bp | ACTGTCATCTCTGTGCTCAATGGTGATTGCAGTGACTaGCGTGAACAGCCTTCAAACGGGTCCTTGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TVISVLNGDCSD*REQPSNGSLAG Trigger: CCCTGCCAAGGACCCGTTTGAAGGCTGTTCACGCCAGTCACTGCAATCACCATTGAGCACAGAGATGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CCA 72 bp | TTCCTGGAGCACTTCCTCACCGTCTGTCTCCCTAGCTaGATTATCACTCCACTCCGAGAGAGGGGTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: FLEHFLTVCLPS*IITPLRERGSN Trigger: ATTGGAACCCCTCTCTCGGAGTGGAGTGATAATCCAGCTAGGGAGACAGACGGTGAGGAAGTGCTCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CAA 72 bp | TTTCTGACCTTAGAAGGATGCCAGAGATCTGGAGCTTaGGCGGTGGATGGACCTGGGTGTGAGTCATGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FLTLEGCQRSGA*AVDGPGCESWL Trigger: GAGCCATGACTCACACCCAGGTCCATCCACCGCCAAAGCTCCAGATCTCTGGCATCCTTCTAAGGTCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 72 bp | GCATGGATCTGGCATGTTGCTGGCTACAAAGCCCCTTaGGTGCCTCTTCTGCACCTTGTTGCAGGGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: AWIWHVAGYKAP*VPLLHLVAGLI Trigger: GATCAACCCTGCAACAAGGTGCAGAAGAGGCACCAAAGGGGCTTTGTAGCCAGCAACATGCCAGATCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS GCA 72 bp | TTGAGTCAGCGCCGGGAAATTAGGGTCAGAGTCAACTaGAGCAAATCAACAGCCTCTCTGCCCCTCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSQRREIRVRVN*SKSTASLPLSL Trigger: AAGACTGAGGGGCAGAGAGGCTGTTGATTTGCTGCAGTTGACTCTGACCCTAATTTCCCGGCGCTGACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 72 bp | GATCTCCTTCTGGAGCGTCCACAGCGCTCCCGACAATaGGAGTCTTCCCCAAATGGCATCTCTTTCATAAAG | + |
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Preference number: 6 (lower is better) Translates to: DLLLERPQRSRQ*ESSPNGISFIK Trigger: CTTTATGAAAGAGATGCCATTTGGGGAAGACTCGCATTGTCGGGAGCGCTGTGGACGCTCCAGAAGGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 72 bp | TCTTCTCCTCCGCAGAGTGGGCTGGAAGGTCAGTGCTaGCTGGAACTGTCATCTCTGTGCTCAATGGTGATT | + |
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Preference number: 6 (lower is better) Translates to: SSPPQSGLEGQC*LELSSLCSMVI Trigger: AATCACCATTGAGCACAGAGATGACAGTTCCAGCAAGCACTGACCTTCCAGCCCACTCTGCGGAGGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 72 bp | CTTGAAGGGACTGTCGTGGTGTGCAGTGAGCATGGCTaGTTTTCCACACGGCACAAAACACATTCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LEGTVVVCSEHG*FSTRHKTHSLW Trigger: CCAGAGGGAATGTGTTTTGTGCCGTGTGGAAAACAAGCCATGCTCACTGCACACCACGACAGTCCCTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000635127.1 ENST00000635247.1 |
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| CDS CAA 90 bp | TTCTTTCCCTTTCTGACCTTAGAAGGATGCCAGAGATCTGGAGCTTaGGCGGTGGATGGACCTGGGTGTGAGTCATGGCTCAGCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: FFPFLTLEGCQRSGA*AVDGPGCESWLSHL Trigger: CAAATGGCTGAGCCATGACTCACACCCAGGTCCATCCACCGCCAAAGCTCCAGATCTCTGGCATCCTTCTAAGGTCAGAAAGGGAAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS GCA 72 bp | CTCAGCCATTTGCCAGCTGTGCAAACTCAGACAAGCTaGTTAAGCCGCGTCACACTTTCTGTAAAGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSHLPAVQTQTS*LSRVTLSVKGR Trigger: CCTTCCCTTTACAGAAAGTGTGACGCGGCTTAAGCAGCTTGTCTGAGTTTGCACAGCTGGCAAATGGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671015.1 |
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| CDS GCA 72 bp | AGACATTCAGATTATTCTTTTCTGGCTCCCGAGAAGTaGACATTCCCTCCACCCGGCATCGTCATCATCGTG | + |
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Preference number: 6 (lower is better) Translates to: RHSDYSFLAPEK*TFPPPGIVIIV Trigger: CACGATGATGACGATGCCGGGTGGAGGGAATGTGCACTTCTCGGGAGCCAGAAAAGAATAATCTGAATGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000425194.2 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 90 bp | AGAAACCACTTCATACACTCAGTGAAAGCAGTGTTCCTGATGAGTTaGAGTCAGCGCCGGGAAATTAGGGTCAGAGTCAACTGCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RNHFIHSVKAVFLMS*SQRREIRVRVNCSK Trigger: TTTGCTGCAGTTGACTCTGACCCTAATTTCCCGGCGCTGACTCAAACTCATCAGGAACACTGCTTTCACTGAGTGTATGAAGTGGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 72 bp | TTCATACACTCAGTGAAAGCAGTGTTCCTGATGAGTTaGAGTCAGCGCCGGGAAATTAGGGTCAGAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: FIHSVKAVFLMS*SQRREIRVRVN Trigger: GTTGACTCTGACCCTAATTTCCCGGCGCTGACTCAAACTCATCAGGAACACTGCTTTCACTGAGTGTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000425194.2 ENST00000635127.1 ENST00000635247.1 ENST00000671015.1 |
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| CDS CAA 72 bp | ATTAAGGCATCCATCACCTTCAATACTGGTCTTTTCTaGATGCTGGAGACATTCAGATTATTCTTTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: IKASITFNTGLF*MLETFRLFFSG Trigger: GCCAGAAAAGAATAATCTGAATGTCTCCAGCATCAAGAAAAGACCAGTATTGAAGGTGATGGATGCCTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425194.2 ENST00000671015.1 |
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