Pregenerated sensors for LINC01344 (Homo sapiens)
Ensembl gene IDs: ENSG00000228918Ensembl transcript IDs: ENST00000420760.1, ENST00000449842.2, ENST00000608183.1, ENST00000653755.1, ENST00000658912.1, ENST00000663078.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGTGGCTTGGGGGTGAACCTTGCTGGTGCACACAGGGCTGGAGTTaGGGAGCTGGAGGTCACCCTGACCCCTGCTCCTGGAGCCATCAC | + |
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Preference number: 5 (lower is better) Translates to: WWLGGEPCWCTQGWS*GAGGHPDPCSWSHH Trigger: GTGATGGCTCCAGGAGCAGGGGTCAGGGTGACCTCCAGCTCCTCAACTCCAGCCCTGTGTGCACCAGCAAGGTTCACCCCCAAGCCACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449842.2 |
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| CDS CCA 90 bp | TGTTTGATTCCAGGCCTGAGTGGGGCTGCGGCTTACATAACAGTTTaGCAGGGAGATGCAGCCAGGCGGAAGCACGCGGGTTTCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: CLIPGLSGAAAYITV*QGDAARRKHAGFQQ Trigger: CTGCTGGAAACCCGCGTGCTTCCGCCTGGCTGCATCTCCCTGCCAAACTGTTATGTAAGCCGCAGCCCCACTCAGGCCTGGAATCAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS GCA 90 bp | CTGGAGTCCCACTGGTGCACATTACTGCTAATGGGGCTTTGCGCCTaGCAACCCAAAAGGAAGAACAGGTCCGCGGTGCATCTGTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LESHWCTLLLMGLCA*QPKRKNRSAVHLWP Trigger: AGGCCACAGATGCACCGCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTGGGACTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
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| CDS GCA 90 bp | CTCTCCCTGGAGTCCCACTGGTGCACATTACTGCTAATGGGGCTTTaGGCCTGCCAACCCAAAAGGAAGAACAGGTCCGCGGTGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: LSLESHWCTLLLMGL*ACQPKRKNRSAVHL Trigger: CAGATGCACCGCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTGGGACTCCAGGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
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| CDS GCA 90 bp | AGGCCTGAGTGGGGCTGCGGCTTACATAACAGTTTGGCAGGGAGATaGAGCCAGGCGGAAGCACGCGGGTTTCCAGCAGCGTATAATCAT | + |
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Preference number: 5 (lower is better) Translates to: RPEWGCGLHNSLAGR*SQAEARGFPAAYNH Trigger: ATGATTATACGCTGCTGGAAACCCGCGTGCTTCCGCCTGGCTGCATCTCCCTGCCAAACTGTTATGTAAGCCGCAGCCCCACTCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CCA 90 bp | ATGGAAAAGCCACTTTGCCAGCCACAGAGCATGCATGGCCCTCCCTaGGCAGGTCTACTCCAGGTGAGACACGGTTTGAGCCAGGCTACA | + |
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Preference number: 5 (lower is better) Translates to: MEKPLCQPQSMHGPP*AGLLQVRHGLSQAT Trigger: TGTAGCCTGGCTCAAACCGTGTCTCACCTGGAGTAGACCTGCCCAGGGAGGGCCATGCATGCTCTGTGGCTGGCAAAGTGGCTTTTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CCA 90 bp | TTGGGGACATGGTGGCAGCAGCGTTGGCAGACATCAGCACCCTCATaGGGCAGAGTCCATGCGGGATCATGTGGGCACATGCAAAAGATT | + |
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Preference number: 5 (lower is better) Translates to: LGTWWQQRWQTSAPS*GRVHAGSCGHMQKI Trigger: AATCTTTTGCATGTGCCCACATGATCCCGCATGGACTCTGCCCCATGAGGGTGCTGATGTCTGCCAACGCTGCTGCCACCATGTCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS CCA 90 bp | TCACTTTGGAAGGGGATTTTGGTGGTGGGAGTCTATACCCTGGAGTaGAGCCGGCTTGGGTACTTCAGACATCAGCGGGCTCCTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLWKGILVVGVYTLE*SRLGYFRHQRAPPL Trigger: CAAGGGAGGAGCCCGCTGATGTCTGAAGTACCCAAGCCGGCTCCACTCCAGGGTATAGACTCCCACCACCAAAATCCCCTTCCAAAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS CCA 90 bp | AAGGGTCACTTTGGAAGGGGATTTTGGTGGTGGGAGTCTATACCCTaGAGTGGAGCCGGCTTGGGTACTTCAGACATCAGCGGGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: KGHFGRGFWWWESIP*SGAGLGTSDISGLL Trigger: GAGGAGCCCGCTGATGTCTGAAGTACCCAAGCCGGCTCCACTCCAGGGTATAGACTCCCACCACCAAAATCCCCTTCCAAAGTGACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS GCA 90 bp | ACTCCAGCCCTTTCAGCTTTCTTCCTCTCCCTGGAGTCCCACTGGTaGACATTACTGCTAATGGGGCTTTGCGCCTGCCAACCCAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: TPALSAFFLSLESHW*TLLLMGLCACQPKR Trigger: CCTTTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTGGGACTCCAGGGAGAGGAAGAAAGCTGAAAGGGCTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
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| CDS CCA 90 bp | GGAACTCCAGCCCTTTCAGCTTTCTTCCTCTCCCTGGAGTCCCACTaGTGCACATTACTGCTAATGGGGCTTTGCGCCTGCCAACCCAAA | + |
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Preference number: 5 (lower is better) Translates to: GTPALSAFFLSLESH*CTLLLMGLCACQPK Trigger: TTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTGGGACTCCAGGGAGAGGAAGAAAGCTGAAAGGGCTGGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
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| CDS CCA 90 bp | TTCTTCACCACAAGGACCTCATACAGGAGAGCTCTGGCTGGCGTTTaGGGGGTACCCCTCTGGGATGAAGCTTCTAGAGGAAGGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: FFTTRTSYRRALAGV*GVPLWDEASRGRNR Trigger: CCTGTTCCTTCCTCTAGAAGCTTCATCCCAGAGGGGTACCCCCCAAACGCCAGCCAGAGCTCTCCTGTATGAGGTCCTTGTGGTGAAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS CCA 90 bp | CCCAAAACAAATGGAAAAGCCACTTTGCCAGCCACAGAGCATGCATaGCCCTCCCTGGGCAGGTCTACTCCAGGTGAGACACGGTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: PKTNGKATLPATEHA*PSLGRSTPGETRFE Trigger: CTCAAACCGTGTCTCACCTGGAGTAGACCTGCCCAGGGAGGGCCATGCATGCTCTGTGGCTGGCAAAGTGGCTTTTCCATTTGTTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS TCA 90 bp | GGAAGGAACAGGCAGCAATCTTTGCTGTTCTGCAGCCTCCGCTGGTaGTACCCAGGCAAACAGGATCTGGAGTGGATCTCCAGCAAACTC | + |
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Preference number: 5 (lower is better) Translates to: GRNRQQSLLFCSLRW*YPGKQDLEWISSKL Trigger: GAGTTTGCTGGAGATCCACTCCAGATCCTGTTTGCCTGGGTATCACCAGCGGAGGCTGCAGAACAGCAAAGATTGCTGCCTGTTCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS TCA 90 bp | AAAGATGGTCCTTCAGCCTGGTGGTGCAGTGCCGGCTCGCATCTGTaGGAGATAGCAATGGACAGACTTGACAGGCTCTCCAACTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: KDGPSAWWCSAGSHL*EIAMDRLDRLSNSE Trigger: CTCAGAGTTGGAGAGCCTGTCAAGTCTGTCCATTGCTATCTCTCACAGATGCGAGCCGGCACTGCACCACCAGGCTGAAGGACCATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS GCA 90 bp | GGGAAAGGAGAGAGGGAAATCCCAAAACAAATGGAAAAGCCACTTTaGCAGCCACAGAGCATGCATGGCCCTCCCTGGGCAGGTCTACTC | + |
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Preference number: 5 (lower is better) Translates to: GKGEREIPKQMEKPL*QPQSMHGPPWAGLL Trigger: GAGTAGACCTGCCCAGGGAGGGCCATGCATGCTCTGTGGCTGGCAAAGTGGCTTTTCCATTTGTTTTGGGATTTCCCTCTCTCCTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS TCA 90 bp | GACATGACAATAAAGTTTTTCCATTTGGCACTGGTGGCTTGGGGGTaGACCTTGCTGGTGCACACAGGGCTGGAGTTGAGGAGCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: DMTIKFFHLALVAWG*TLLVHTGLELRSWR Trigger: CCTCCAGCTCCTCAACTCCAGCCCTGTGTGCACCAGCAAGGTTCACCCCCAAGCCACCAGTGCCAAATGGAAAAACTTTATTGTCATGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000449842.2 |
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| CDS TCA 90 bp | AGCCAGGCGGAAGCACGCGGGTTTCCAGCAGCGTATAATCATCTTTaGTTTCTCTGTTTGCTCAGCAGCTTTCATGTGGTGGGGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SQAEARGFPAAYNHL*FLCLLSSFHVVGEA Trigger: TGCCTCCCCCACCACATGAAAGCTGCTGAGCAAACAGAGAAATCAAAGATGATTATACGCTGCTGGAAACCCGCGTGCTTCCGCCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CCA 90 bp | TACCCAGGCAAACAGGATCTGGAGTGGATCTCCAGCAAACTCCAGTaGACCTGTAGCAGAGGGGTCCAACTGCCTCTGCTCATATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: YPGKQDLEWISSKLQ*TCSRGVQLPLLISS Trigger: TGAAGATATGAGCAGAGGCAGTTGGACCCCTCTGCTACAGGTCCACTGGAGTTTGCTGGAGATCCACTCCAGATCCTGTTTGCCTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS TCA 90 bp | GGGCAGAGTCCATGCGGGATCATGTGGGCACATGCAAAAGATTCCTaGGGATTCCTGATGAAACCTAAAGGAGAGATCTCACAGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GQSPCGIMWAHAKDS*GFLMKPKGEISQRG Trigger: CCCTCTCTGTGAGATCTCTCCTTTAGGTTTCATCAGGAATCCTCAGGAATCTTTTGCATGTGCCCACATGATCCCGCATGGACTCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS TCA 90 bp | CACCAACCTAGATCCTTCTGCCTTCTGCCATGGGATCACGCAGCATaGAAATCCTCACCAGATGTAGACTCCTCAACCTTGGACTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HQPRSFCLLPWDHAA*KSSPDVDSSTLDFS Trigger: TGAGAAGTCCAAGGTTGAGGAGTCTACATCTGGTGAGGATTTTCATGCTGCGTGATCCCATGGCAGAAGGCAGAAGGATCTAGGTTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS TCA 90 bp | AGGCGTTATCTGACTCCAAAGTTCAGGCCTCTTCTACTTGAGATCTaGGTCCCTCACACTGGAGCATGGTCAGTTAAGGCTGCAAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: RRYLTPKFRPLLLEI*VPHTGAWSVKAAKG Trigger: CCCTTTTGCAGCCTTAACTGACCATGCTCCAGTGTGAGGGACTCAGATCTCAAGTAGAAGAGGCCTGAACTTTGGAGTCAGATAACGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CCA 90 bp | CAAAGTAAACGCCTGGTCCTGACCCATCCATACCTCTGTGCTGGATaGGAAAGGAGAGAGGGAAATCCCAAAACAAATGGAAAAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: QSKRLVLTHPYLCAG*ERREGNPKTNGKAT Trigger: AGTGGCTTTTCCATTTGTTTTGGGATTTCCCTCTCTCCTTTCCCATCCAGCACAGAGGTATGGATGGGTCAGGACCAGGCGTTTACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CCA 90 bp | ATAGCAATGGACAGACTTGACAGGCTCTCCAACTCTGAGATTTTGTaGTTCCCGGCTCTTGTCCATCTTTCCTATGTACAGGTGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: IAMDRLDRLSNSEIL*FPALVHLSYVQVRS Trigger: GGACCTCACCTGTACATAGGAAAGATGGACAAGAGCCGGGAACCACAAAATCTCAGAGTTGGAGAGCCTGTCAAGTCTGTCCATTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS CCA 90 bp | TTCCCGGCTCTTGTCCATCTTTCCTATGTACAGGTGAGGTCCTTGTaGAGACAGGCCTTCTACAAGAGCTTTCTTCTCATGTTTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FPALVHLSYVQVRSL*RQAFYKSFLLMFFH Trigger: GTGGAAAAACATGAGAAGAAAGCTCTTGTAGAAGGCCTGTCTCCACAAGGACCTCACCTGTACATAGGAAAGATGGACAAGAGCCGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS TCA 90 bp | AAATTAGTGGCCTACAACATGATAGTGTACAGTCCATACACAGCATaGGCTGGCCACCTTGAGCTAGAGGCCTTGGTCTTTCCTAACCTA | + |
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Preference number: 5 (lower is better) Translates to: KLVAYNMIVYSPYTA*AGHLELEALVFPNL Trigger: TAGGTTAGGAAAGACCAAGGCCTCTAGCTCAAGGTGGCCAGCTCATGCTGTGTATGGACTGTACACTATCATGTTGTAGGCCACTAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS TCA 90 bp | GCTTCTGTGCTAATCCTGCAGCATTTGGGGGATCTTGAATTCTTCTaGGACTGTAACTATCTATATCTTTGGGGACATGGTGGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ASVLILQHLGDLEFF*DCNYLYLWGHGGSS Trigger: GCTGCTGCCACCATGTCCCCAAAGATATAGATAGTTACAGTCTCAGAAGAATTCAAGATCCCCCAAATGCTGCAGGATTAGCACAGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS CCA 90 bp | CTGAGAGGACATGAGTACCCGCCTCTCAAACTCCCAGAGGTAAACTaGCATTATGAAGGAACAATAGCCCAAGTTTATGTTTGGAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LRGHEYPPLKLPEVN*HYEGTIAQVYVWRE Trigger: TTCCCTCCAAACATAAACTTGGGCTATTGTTCCTTCATAATGCCAGTTTACCTCTGGGAGTTTGAGAGGCGGGTACTCATGTCCTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS TCA 90 bp | ATAGGCTCTGAAAGACTAAGCTATAGCTCCAATACAGGCGTTATCTaGCTCCAAAGTTCAGGCCTCTTCTACTTGAGATCTGAGTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: IGSERLSYSSNTGVI*LQSSGLFYLRSESL Trigger: GAGGGACTCAGATCTCAAGTAGAAGAGGCCTGAACTTTGGAGTCAGATAACGCCTGTATTGGAGCTATAGCTTAGTCTTTCAGAGCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS TCA 90 bp | CTGTTCACCCTTTCCATACTGGAACAAGTGAGAGGTGGAGGATGGTaGATCATTTTCCAAAGCCAGAATTGGCCCTCTTGGAATCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LFTLSILEQVRGGGW*IIFQSQNWPSWNLC Trigger: ACAAAGATTCCAAGAGGGCCAATTCTGGCTTTGGAAAATGATTCACCATCCTCCACCTCTCACTTGTTCCAGTATGGAAAGGGTGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CCA 90 bp | TCTAGGTTGTGCTCTGACTTTTCCCAAACTCTGGACAAACAGGCATaGACTCTATGTAGGGTAACAACTTCTATGGCAGGCTTGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: SRLCSDFSQTLDKQA*TLCRVTTSMAGLDL Trigger: CAAATCCAAGCCTGCCATAGAAGTTGTTACCCTACATAGAGTCCATGCCTGTTTGTCCAGAGTTTGGGAAAAGTCAGAGCACAACCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420760.1 |
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| CDS TCA 90 bp | AGAGGACAAACTAGAGACAGCAACAGCTCATCCAGTGTACCACGCTaGGTGAAAACAAATTCCGCAGTTCCTTTTCAAACTTCCAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: RGQTRDSNSSSSVPR*VKTNSAVPFQTSKV Trigger: GACTTTGGAAGTTTGAAAAGGAACTGCGGAATTTGTTTTCACTCAGCGTGGTACACTGGATGAGCTGTTGCTGTCTCTAGTTTGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS TCA 90 bp | GGTCAGTTAAGGCTGCAAAAGGGAGAGAGTAATGGAGGTCAGCGTTaGATAGATACGAATATAAACTCTTGGGCACTGTTAACGCCAAAC | + |
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Preference number: 5 (lower is better) Translates to: GQLRLQKGESNGGQR*IDTNINSWALLTPN Trigger: GTTTGGCGTTAACAGTGCCCAAGAGTTTATATTCGTATCTATTCAACGCTGACCTCCATTACTCTCTCCCTTTTGCAGCCTTAACTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS TCA 90 bp | TTTTGGATGGTGGTCATTTCAGCCTTTCTAATCAGCTTCTGGAGGTaGCATTTAAGAGGACAAACTAGAGACAGCAACAGCTCATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: FWMVVISAFLISFWR*HLRGQTRDSNSSSS Trigger: ACTGGATGAGCTGTTGCTGTCTCTAGTTTGTCCTCTTAAATGTCACCTCCAGAAGCTGATTAGAAAGGCTGAAATGACCACCATCCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS TCA 90 bp | CATGGTGGACTTTTTGCTTCCAGGAGATCAAATAATTTTCCAGTGTaGTTGATGCCTCTCCTCACTTCAACTCAGAAGAATAGTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HGGLFASRRSNNFPV*LMPLLTSTQKNSLQ Trigger: CTGAAGACTATTCTTCTGAGTTGAAGTGAGGAGAGGCATCAATCACACTGGAAAATTATTTGATCTCCTGGAAGCAAAAAGTCCACCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449842.2 |
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| CDS TCA 90 bp | GTGGACTTTTTGCTTCCAGGAGATCAAATAATTTTCCAGTGTGATTaGTGCCTCTCCTCACTTCAACTCAGAAGAATAGTCTTCAGTTTA | + |
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Preference number: 5 (lower is better) Translates to: VDFLLPGDQIIFQCD*CLSSLQLRRIVFSL Trigger: TAAACTGAAGACTATTCTTCTGAGTTGAAGTGAGGAGAGGCATCAATCACACTGGAAAATTATTTGATCTCCTGGAAGCAAAAAGTCCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449842.2 |
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| CDS CCA 72 bp | CCAGGCCTGAGTGGGGCTGCGGCTTACATAACAGTTTaGCAGGGAGATGCAGCCAGGCGGAAGCACGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: PGLSGAAAYITV*QGDAARRKHAG Trigger: ACCCGCGTGCTTCCGCCTGGCTGCATCTCCCTGCCAAACTGTTATGTAAGCCGCAGCCCCACTCAGGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS GCA 72 bp | TGGGGCTGCGGCTTACATAACAGTTTGGCAGGGAGATaGAGCCAGGCGGAAGCACGCGGGTTTCCAGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: WGCGLHNSLAGR*SQAEARGFPAA Trigger: CGCTGCTGGAAACCCGCGTGCTTCCGCCTGGCTGCATCTCCCTGCCAAACTGTTATGTAAGCCGCAGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CCA 72 bp | GGTGGTGGGAGTCTATACCCTGGAGTGGAGCCGGCTTaGGTACTTCAGACATCAGCGGGCTCCTCCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GGGSLYPGVEPA*VLQTSAGSSLG Trigger: GCCAAGGGAGGAGCCCGCTGATGTCTGAAGTACCCAAGCCGGCTCCACTCCAGGGTATAGACTCCCACCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS CAA 72 bp | TGGTGGTGGGAGTCTATACCCTGGAGTGGAGCCGGCTaGGGTACTTCAGACATCAGCGGGCTCCTCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WWWESIPWSGAG*GTSDISGLLPW Trigger: CCAAGGGAGGAGCCCGCTGATGTCTGAAGTACCCAAGCCGGCTCCACTCCAGGGTATAGACTCCCACCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS TCA 72 bp | ACTCCAGGTGAGACACGGTTTGAGCCAGGCTACAGGTaGGGAGCGGGTCACGGGAGGGCTCTAAATGGCATC | + |
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Preference number: 6 (lower is better) Translates to: TPGETRFEPGYR*GAGHGRALNGI Trigger: GATGCCATTTAGAGCCCTCCCGTGACCCGCTCCTCACCTGTAGCCTGGCTCAAACCGTGTCTCACCTGGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CAA 90 bp | CTGTTTGATTCCAGGCCTGAGTGGGGCTGCGGCTTACATAACAGTTaGGCAGGGAGATGCAGCCAGGCGGAAGCACGCGGGTTTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LFDSRPEWGCGLHNS*AGRCSQAEARGFPA Trigger: TGCTGGAAACCCGCGTGCTTCCGCCTGGCTGCATCTCCCTGCCAAACTGTTATGTAAGCCGCAGCCCCACTCAGGCCTGGAATCAAACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CAA 90 bp | AGGGGATTTTGGTGGTGGGAGTCTATACCCTGGAGTGGAGCCGGCTaGGGTACTTCAGACATCAGCGGGCTCCTCCCTTGGCTCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: RGFWWWESIPWSGAG*GTSDISGLLPWLQV Trigger: TACCTGGAGCCAAGGGAGGAGCCCGCTGATGTCTGAAGTACCCAAGCCGGCTCCACTCCAGGGTATAGACTCCCACCACCAAAATCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS CAA 90 bp | CCTCTCCCTGGAGTCCCACTGGTGCACATTACTGCTAATGGGGCTTaGCGCCTGCCAACCCAAAAGGAAGAACAGGTCCGCGGTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PLPGVPLVHITANGA*RLPTQKEEQVRGAS Trigger: AGATGCACCGCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTGGGACTCCAGGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
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| CDS TCA 72 bp | CCTTCAGCCTGGTGGTGCAGTGCCGGCTCGCATCTGTaGGAGATAGCAATGGACAGACTTGACAGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSAWWCSAGSHL*EIAMDRLDRLS Trigger: GGAGAGCCTGTCAAGTCTGTCCATTGCTATCTCTCACAGATGCGAGCCGGCACTGCACCACCAGGCTGAAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS CAA 90 bp | CAGGTGAGGAGCGGGTCACGGGAGGGCTCTAAATGGCATCTCTGTTaGATTCCAGGCCTGAGTGGGGCTGCGGCTTACATAACAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: QVRSGSREGSKWHLC*IPGLSGAAAYITVW Trigger: CCAAACTGTTATGTAAGCCGCAGCCCCACTCAGGCCTGGAATCAAACAGAGATGCCATTTAGAGCCCTCCCGTGACCCGCTCCTCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS GCA 72 bp | GAGTCCCACTGGTGCACATTACTGCTAATGGGGCTTTaGGCCTGCCAACCCAAAAGGAAGAACAGGTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: ESHWCTLLLMGL*ACQPKRKNRSA Trigger: CGCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTGGGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
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| CDS GCA 72 bp | GCGCCTGCCAACCCAAAAGGAAGAACAGGTCCGCGGTaGATCTGTGGCCTAATGAGGAGCTATTCCCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: APANPKGRTGPR*ICGLMRSYSPL Trigger: TAGAGGGGAATAGCTCCTCATTAGGCCACAGATGCACCGCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS CCA 72 bp | ACAAGGACCTCATACAGGAGAGCTCTGGCTGGCGTTTaGGGGGTACCCCTCTGGGATGAAGCTTCTAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TRTSYRRALAGV*GVPLWDEASRG Trigger: TCCTCTAGAAGCTTCATCCCAGAGGGGTACCCCCCAAACGCCAGCCAGAGCTCTCCTGTATGAGGTCCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS CCA 72 bp | AATGGAAAAGCCACTTTGCCAGCCACAGAGCATGCATaGCCCTCCCTGGGCAGGTCTACTCCAGGTGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: NGKATLPATEHA*PSLGRSTPGET Trigger: TGTCTCACCTGGAGTAGACCTGCCCAGGGAGGGCCATGCATGCTCTGTGGCTGGCAAAGTGGCTTTTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
||
| CDS CCA 72 bp | AAGGGGATTTTGGTGGTGGGAGTCTATACCCTGGAGTaGAGCCGGCTTGGGTACTTCAGACATCAGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KGILVVGVYTLE*SRLGYFRHQRA Trigger: AGCCCGCTGATGTCTGAAGTACCCAAGCCGGCTCCACTCCAGGGTATAGACTCCCACCACCAAAATCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CAA 72 bp | GGAGTCCCACTGGTGCACATTACTGCTAATGGGGCTTaGCGCCTGCCAACCCAAAAGGAAGAACAGGTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GVPLVHITANGA*RLPTQKEEQVR Trigger: GCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTGGGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
||
| CDS TCA 72 bp | AGGCAGCAATCTTTGCTGTTCTGCAGCCTCCGCTGGTaGTACCCAGGCAAACAGGATCTGGAGTGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQQSLLFCSLRW*YPGKQDLEWIS Trigger: GGAGATCCACTCCAGATCCTGTTTGCCTGGGTATCACCAGCGGAGGCTGCAGAACAGCAAAGATTGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS GCA 72 bp | CACTGGTGCACATTACTGCTAATGGGGCTTTGCGCCTaGCAACCCAAAAGGAAGAACAGGTCCGCGGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HWCTLLLMGLCA*QPKRKNRSAVH Trigger: ATGCACCGCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGCAAAGCCCCATTAGCAGTAATGTGCACCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449842.2 ENST00000608183.1 |
||
| CDS CCA 72 bp | AAACAGGATCTGGAGTGGATCTCCAGCAAACTCCAGTaGACCTGTAGCAGAGGGGTCCAACTGCCTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KQDLEWISSKLQ*TCSRGVQLPLL Trigger: GAGCAGAGGCAGTTGGACCCCTCTGCTACAGGTCCACTGGAGTTTGCTGGAGATCCACTCCAGATCCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS CAA 90 bp | GAGACTGTAACTATCTATATCTTTGGGGACATGGTGGCAGCAGCGTaGGCAGACATCAGCACCCTCATGGGGCAGAGTCCATGCGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: ETVTIYIFGDMVAAA*ADISTLMGQSPCGI Trigger: GATCCCGCATGGACTCTGCCCCATGAGGGTGCTGATGTCTGCCAACGCTGCTGCCACCATGTCCCCAAAGATATAGATAGTTACAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CAA 90 bp | GAGTGGAGCCGGCTTGGGTACTTCAGACATCAGCGGGCTCCTCCCTaGGCTCCAGGTAAAAAGAAACTGTACACTGAAGCTGCAATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EWSRLGYFRHQRAPP*APGKKKLYTEAAIA Trigger: GGCTATTGCAGCTTCAGTGTACAGTTTCTTTTTACCTGGAGCCAAGGGAGGAGCCCGCTGATGTCTGAAGTACCCAAGCCGGCTCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS GCA 72 bp | GCGCCTGCCAACCCAAAAGGAAGAACAGGTCCGCGGTaGATCTGTGGCCTAATGAGGAGCCTTTTCAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: APANPKGRTGPR*ICGLMRSLFKL Trigger: AAGTTTGAAAAGGCTCCTCATTAGGCCACAGATGCACCGCGGACCTGTTCTTCCTTTTGGGTTGGCAGGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS GCA 72 bp | ATGGCATCTCTGTTTGATTCCAGGCCTGAGTGGGGCTaGGGCTTACATAACAGTTTGGCAGGGAGATGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: MASLFDSRPEWG*GLHNSLAGRCS Trigger: GCTGCATCTCCCTGCCAAACTGTTATGTAAGCCGCAGCCCCACTCAGGCCTGGAATCAAACAGAGATGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
||
| CDS CCA 72 bp | CTATCTATATCTTTGGGGACATGGTGGCAGCAGCGTTaGCAGACATCAGCACCCTCATGGGGCAGAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LSISLGTWWQQR*QTSAPSWGRVH Trigger: ATGGACTCTGCCCCATGAGGGTGCTGATGTCTGCCAACGCTGCTGCCACCATGTCCCCAAAGATATAGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CCA 72 bp | TTTGGAAGGGGATTTTGGTGGTGGGAGTCTATACCCTaGAGTGGAGCCGGCTTGGGTACTTCAGACATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FGRGFWWWESIP*SGAGLGTSDIS Trigger: GCTGATGTCTGAAGTACCCAAGCCGGCTCCACTCCAGGGTATAGACTCCCACCACCAAAATCCCCTTCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CAA 72 bp | GCTGGGGAGGGAAGCAAAGATCGGTGCACTCAGGGCTaGGTGGGCCAAAGTAAAAATGAGCATCGAGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: AGEGSKDRCTQG*VGQSKNEHRGL Trigger: AAGTCCTCGATGCTCATTTTTACTTTGGCCCACCAAGCCCTGAGTGCACCGATCTTTGCTTCCCTCCCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS TCA 72 bp | ATAAAGTTTTTCCATTTGGCACTGGTGGCTTGGGGGTaGACCTTGCTGGTGCACACAGGGCTGGAGTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IKFFHLALVAWG*TLLVHTGLELR Trigger: CCTCAACTCCAGCCCTGTGTGCACCAGCAAGGTTCACCCCCAAGCCACCAGTGCCAAATGGAAAAACTTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS CCA 72 bp | CTGGGGAGGGAAGCAAAGATCGGTGCACTCAGGGCTTaGTGGGCCAAAGTAAAAATGAGCATCGAGGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGREAKIGALRA*WAKVKMSIEDF Trigger: AAAGTCCTCGATGCTCATTTTTACTTTGGCCCACCAAGCCCTGAGTGCACCGATCTTTGCTTCCCTCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS CCA 72 bp | GGCTTGGGTACTTCAGACATCAGCGGGCTCCTCCCTTaGCTCCAGGTAAAAAGAAACTGTACACTGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLGTSDISGLLP*LQVKRNCTLKL Trigger: CAGCTTCAGTGTACAGTTTCTTTTTACCTGGAGCCAAGGGAGGAGCCCGCTGATGTCTGAAGTACCCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CAA 72 bp | CGGCTTGGGTACTTCAGACATCAGCGGGCTCCTCCCTaGGCTCCAGGTAAAAAGAAACTGTACACTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLGYFRHQRAPP*APGKKKLYTEA Trigger: AGCTTCAGTGTACAGTTTCTTTTTACCTGGAGCCAAGGGAGGAGCCCGCTGATGTCTGAAGTACCCAAGCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CAA 72 bp | CATGACAATAAAGTTTTTCCATTTGGCACTGGTGGCTaGGGGGTGAACCTTGCTGGTGCACACAGGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HDNKVFPFGTGG*GVNLAGAHRAG Trigger: TCCAGCCCTGTGTGCACCAGCAAGGTTCACCCCCAAGCCACCAGTGCCAAATGGAAAAACTTTATTGTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS CAA 90 bp | GTTCAAAGACATGACAATAAAGTTTTTCCATTTGGCACTGGTGGCTaGGGGGTGAACCTTGCTGGTGCACACAGGGCTGGAGTTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VQRHDNKVFPFGTGG*GVNLAGAHRAGVEE Trigger: CTCCTCAACTCCAGCCCTGTGTGCACCAGCAAGGTTCACCCCCAAGCCACCAGTGCCAAATGGAAAAACTTTATTGTCATGTCTTTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS CAA 90 bp | TGCCCCCGACCGTGTCTCTTTCTTGTAGCCCACATGCAGCTGGTGTaGTACAGAGTACTAAAAGGCACAATCTGCAAGGAATTCAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPRPCLFLVAHMQLV*YRVLKGTICKEFKG Trigger: GCCTTTGAATTCCTTGCAGATTGTGCCTTTTAGTACTCTGTACAACACCAGCTGCATGTGGGCTACAAGAAAGAGACACGGTCGGGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS TCA 72 bp | GCCTACAACATGATAGTGTACAGTCCATACACAGCATaGGCTGGCCACCTTGAGCTAGAGGCCTTGGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AYNMIVYSPYTA*AGHLELEALVF Trigger: AAAGACCAAGGCCTCTAGCTCAAGGTGGCCAGCTCATGCTGTGTATGGACTGTACACTATCATGTTGTAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS TCA 72 bp | GCGTTATCTGACTCCAAAGTTCAGGCCTCTTCTACTTaGGATCTGAGTCCCTCACACTGGAGCATGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALSDSKVQASST*DLSPSHWSMVS Trigger: ACTGACCATGCTCCAGTGTGAGGGACTCAGATCTCAAGTAGAAGAGGCCTGAACTTTGGAGTCAGATAACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653755.1 |
||
| CDS CCA 72 bp | CAACCCAAAAGGAAGAACAGGTCCGCGGTGCATCTGTaGCCTAATGAGGAGCCTTTTCAAACTTCCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPKRKNRSAVHL*PNEEPFQTSKV Trigger: GACTTTGGAAGTTTGAAAAGGCTCCTCATTAGGCCACAGATGCACCGCGGACCTGTTCTTCCTTTTGGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS CAA 90 bp | GAGATAGCAATGGACAGACTTGACAGGCTCTCCAACTCTGAGATTTaGTGGTTCCCGGCTCTTGTCCATCTTTCCTATGTACAGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EIAMDRLDRLSNSEI*WFPALVHLSYVQVR Trigger: CCTCACCTGTACATAGGAAAGATGGACAAGAGCCGGGAACCACAAAATCTCAGAGTTGGAGAGCCTGTCAAGTCTGTCCATTGCTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS CCA 72 bp | GACAGACTTGACAGGCTCTCCAACTCTGAGATTTTGTaGTTCCCGGCTCTTGTCCATCTTTCCTATGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: DRLDRLSNSEIL*FPALVHLSYVQ Trigger: CTGTACATAGGAAAGATGGACAAGAGCCGGGAACCACAAAATCTCAGAGTTGGAGAGCCTGTCAAGTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS CAA 90 bp | GCCAGAGCAGATGACATGAGATGCCTACTTTTGGATGGAAACACCTaGCATGATCTCTGCTTCTTCATTCATGGGGTGGAGCTAAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARADDMRCLLLDGNT*HDLCFFIHGVELRS Trigger: AGACCTTAGCTCCACCCCATGAATGAAGAAGCAGAGATCATGCAAGGTGTTTCCATCCAAAAGTAGGCATCTCATGTCATCTGCTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS CAA 90 bp | TGGTTCCCGGCTCTTGTCCATCTTTCCTATGTACAGGTGAGGTCCTaGTGGAGACAGGCCTTCTACAAGAGCTTTCTTCTCATGTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WFPALVHLSYVQVRS*WRQAFYKSFLLMFF Trigger: GAAAAACATGAGAAGAAAGCTCTTGTAGAAGGCCTGTCTCCACAAGGACCTCACCTGTACATAGGAAAGATGGACAAGAGCCGGGAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS CAA 90 bp | GCCAGAGCAGATGACATGAGATGCCTACTTTTGGATGGAAACACCTaGCATGATCTCTGCTTCTTCATTCCAGATAGGTCTCTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARADDMRCLLLDGNT*HDLCFFIPDRSLFR Trigger: CCTGAACAGAGACCTATCTGGAATGAAGAAGCAGAGATCATGCAAGGTGTTTCCATCCAAAAGTAGGCATCTCATGTCATCTGCTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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| CDS TCA 72 bp | AGGGTTTCCTGTTCACCCTTTCCATACTGGAACAAGTaGGAGGTGGAGGATGGTGAATCATTTTCCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RVSCSPFPYWNK*EVEDGESFSKA Trigger: GGCTTTGGAAAATGATTCACCATCCTCCACCTCTCACTTGTTCCAGTATGGAAAGGGTGAACAGGAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
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| CDS TCA 72 bp | CCATGCGGGATCATGTGGGCACATGCAAAAGATTCCTaGGGATTCCTGATGAAACCTAAAGGAGAGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCGIMWAHAKDS*GFLMKPKGEIS Trigger: TGAGATCTCTCCTTTAGGTTTCATCAGGAATCCTCAGGAATCTTTTGCATGTGCCCACATGATCCCGCATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658912.1 |
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| CDS TCA 72 bp | CCCGCCTCTCAAACTCCCAGAGGTAAACTGGCATTATaGAGGAACAATAGCCCAAGTTTATGTTTGGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PASQTPRGKLAL*RNNSPSLCLEG Trigger: TCCCTCCAAACATAAACTTGGGCTATTGTTCCTTCATAATGCCAGTTTACCTCTGGGAGTTTGAGAGGCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CCA 72 bp | TGCTCTGACTTTTCCCAAACTCTGGACAAACAGGCATaGACTCTATGTAGGGTAACAACTTCTATGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CSDFSQTLDKQA*TLCRVTTSMAG Trigger: GCCTGCCATAGAAGTTGTTACCCTACATAGAGTCCATGCCTGTTTGTCCAGAGTTTGGGAAAAGTCAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420760.1 |
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| CDS CCA 72 bp | CTTGTCCATCTTTCCTATGTACAGGTGAGGTCCTTGTaGAGACAGGCCTTCTACAAGAGCTTTCTTCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LVHLSYVQVRSL*RQAFYKSFLLM Trigger: CATGAGAAGAAAGCTCTTGTAGAAGGCCTGTCTCCACAAGGACCTCACCTGTACATAGGAAAGATGGACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663078.1 |
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| CDS CAA 72 bp | CCGTGTCTCTTTCTTGTAGCCCACATGCAGCTGGTGTaGTACAGAGTACTAAAAGGCACAATCTGCAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PCLFLVAHMQLV*YRVLKGTICKE Trigger: TTCCTTGCAGATTGTGCCTTTTAGTACTCTGTACAACACCAGCTGCATGTGGGCTACAAGAAAGAGACACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS CAA 72 bp | ATGGACAGACTTGACAGGCTCTCCAACTCTGAGATTTaGTGGTTCCCGGCTCTTGTCCATCTTTCCTATGTA | + |
|
Preference number: 6 (lower is better) Translates to: MDRLDRLSNSEI*WFPALVHLSYV Trigger: TACATAGGAAAGATGGACAAGAGCCGGGAACCACAAAATCTCAGAGTTGGAGAGCCTGTCAAGTCTGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663078.1 |
||
| CDS CAA 90 bp | GCCAGAGCAGATGACATGAGATGCCTACTTTTGGATGGAAACACCTaGCATGATCTCTGCTTCTTCATTCCTGATCACTCAGAAAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ARADDMRCLLLDGNT*HDLCFFIPDHSEKA Trigger: GGCTTTTTCTGAGTGATCAGGAATGAAGAAGCAGAGATCATGCAAGGTGTTTCCATCCAAAAGTAGGCATCTCATGTCATCTGCTCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS TCA 72 bp | GTCATACATGTAAGCCTTTTCTCTACAGTTAGGCTATaGGAGCCTTGGAGAGAATGGGCATCCCCAAAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VIHVSLFSTVRL*EPWREWASPKY Trigger: GTACTTTGGGGATGCCCATTCTCTCCAAGGCTCTCATAGCCTAACTGTAGAGAAAAGGCTTACATGTATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS CAA 72 bp | GATGACATGAGATGCCTACTTTTGGATGGAAACACCTaGCATGATCTCTGCTTCTTCATTCATGGGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DDMRCLLLDGNT*HDLCFFIHGVE Trigger: CTCCACCCCATGAATGAAGAAGCAGAGATCATGCAAGGTGTTTCCATCCAAAAGTAGGCATCTCATGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653755.1 |
||
| CDS TCA 72 bp | ACTAGAGACAGCAACAGCTCATCCAGTGTACCACGCTaGGTGAAAACAAATTCCGCAGTTCCTTTTCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: TRDSNSSSSVPR*VKTNSAVPFQT Trigger: AGTTTGAAAAGGAACTGCGGAATTTGTTTTCACTCAGCGTGGTACACTGGATGAGCTGTTGCTGTCTCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS TCA 72 bp | GTGGTCATTTCAGCCTTTCTAATCAGCTTCTGGAGGTaGCATTTAAGAGGACAAACTAGAGACAGCAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VVISAFLISFWR*HLRGQTRDSNS Trigger: GCTGTTGCTGTCTCTAGTTTGTCCTCTTAAATGTCACCTCCAGAAGCTGATTAGAAAGGCTGAAATGACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608183.1 |
||
| CDS GCA 72 bp | ACAATAGATTTGTTCTTGTTTCCTCCTGATACCTGGTaGAGTGCTTTGGTGATTGTGCTGAGAGGACATGAG | + |
|
Preference number: 6 (lower is better) Translates to: TIDLFLFPPDTW*SALVIVLRGHE Trigger: CTCATGTCCTCTCAGCACAATCACCAAAGCACTGCACCAGGTATCAGGAGGAAACAAGAACAAATCTATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS CCA 72 bp | CATGAGTACCCGCCTCTCAAACTCCCAGAGGTAAACTaGCATTATGAAGGAACAATAGCCCAAGTTTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: HEYPPLKLPEVN*HYEGTIAQVYV Trigger: AACATAAACTTGGGCTATTGTTCCTTCATAATGCCAGTTTACCTCTGGGAGTTTGAGAGGCGGGTACTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS TCA 72 bp | TTTCTCAAGGTTAAATACTGGCCAGAGCAGATGACATaGGATGCCTACTTTTGGATGGAAACACCTTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: FLKVKYWPEQMT*DAYFWMETPCM Trigger: CATGCAAGGTGTTTCCATCCAAAAGTAGGCATCTCATGTCATCTGCTCTGGCCAGTATTTAACCTTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000449842.2 ENST00000608183.1 ENST00000653755.1 ENST00000663078.1 |
||
| CDS TCA 72 bp | AGGCTGCAAAAGGGAGAGAGTAATGGAGGTCAGCGTTaGATAGATACGAATATAAACTCTTGGGCACTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RLQKGESNGGQR*IDTNINSWALL Trigger: TAACAGTGCCCAAGAGTTTATATTCGTATCTATTCAACGCTGACCTCCATTACTCTCTCCCTTTTGCAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653755.1 |
||
| CDS TCA 72 bp | GAAAGACTAAGCTATAGCTCCAATACAGGCGTTATCTaGCTCCAAAGTTCAGGCCTCTTCTACTTGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: ERLSYSSNTGVI*LQSSGLFYLRS Trigger: AGATCTCAAGTAGAAGAGGCCTGAACTTTGGAGTCAGATAACGCCTGTATTGGAGCTATAGCTTAGTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653755.1 |
||
| CDS CAA 72 bp | GATGACATGAGATGCCTACTTTTGGATGGAAACACCTaGCATGATCTCTGCTTCTTCATTCCTGATCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: DDMRCLLLDGNT*HDLCFFIPDHS Trigger: TGAGTGATCAGGAATGAAGAAGCAGAGATCATGCAAGGTGTTTCCATCCAAAAGTAGGCATCTCATGTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449842.2 |
||
| CDS CAA 72 bp | TGGAGGTCAGCGTTGAATAGATACGAATATAAACTCTaGGGCACTGTTAACGCCAAACAGCCTGACATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: WRSALNRYEYKL*GTVNAKQPDIL Trigger: TAAGATGTCAGGCTGTTTGGCGTTAACAGTGCCCAAGAGTTTATATTCGTATCTATTCAACGCTGACCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653755.1 |
||
| CDS TCA 72 bp | CTTCTTTTCTCAAGGTTAAATACTGGCCAGAGCAGATaGCATGAGATGCCTACTTTTGGATGGAAACACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLFSRLNTGQSR*HEMPTFGWKHL Trigger: AAGGTGTTTCCATCCAAAAGTAGGCATCTCATGTCATCTGCTCTGGCCAGTATTTAACCTTGAGAAAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000449842.2 ENST00000608183.1 ENST00000653755.1 ENST00000663078.1 |
||
| CDS TCA 72 bp | CTAATCCTGCAGCATTTGGGGGATCTTGAATTCTTCTaGGACTGTAACTATCTATATCTTTGGGGACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LILQHLGDLEFF*DCNYLYLWGHG Trigger: ACCATGTCCCCAAAGATATAGATAGTTACAGTCTCAGAAGAATTCAAGATCCCCCAAATGCTGCAGGATTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658912.1 |
||
| CDS TCA 72 bp | TTGCTTCCAGGAGATCAAATAATTTTCCAGTGTGATTaGTGCCTCTCCTCACTTCAACTCAGAAGAATAGTC | + |
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Preference number: 6 (lower is better) Translates to: LLPGDQIIFQCD*CLSSLQLRRIV Trigger: GACTATTCTTCTGAGTTGAAGTGAGGAGAGGCATCAATCACACTGGAAAATTATTTGATCTCCTGGAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449842.2 |
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| CDS CAA 72 bp | GAAGTCCATGGCAAGAACAACTTCATGGTGGACTTTTaGCTTCCAGGAGATCAAATAATTTTCCAGTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: EVHGKNNFMVDF*LPGDQIIFQCD Trigger: ATCACACTGGAAAATTATTTGATCTCCTGGAAGCAAAAAGTCCACCATGAAGTTGTTCTTGCCATGGACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449842.2 |
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| CDS TCA 72 bp | CTTTTTGCTTCCAGGAGATCAAATAATTTTCCAGTGTaGTTGATGCCTCTCCTCACTTCAACTCAGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: LFASRRSNNFPV*LMPLLTSTQKN Trigger: ATTCTTCTGAGTTGAAGTGAGGAGAGGCATCAATCACACTGGAAAATTATTTGATCTCCTGGAAGCAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449842.2 |
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| CDS TCA 72 bp | AGAAAGTCCTTGCTGAGGAGGTTATTAGATTGTTTCTaGACAATAAGAAGGAATGAACCACGTGAAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RKSLLRRLLDCF*TIRRNEPREKP Trigger: TGGCTTTTCACGTGGTTCATTCCTTCTTATTGTTCAGAAACAATCTAATAACCTCCTCAGCAAGGACTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608183.1 |
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