Pregenerated sensors for LINC01343 (Homo sapiens)
Ensembl gene IDs: ENSG00000237290Ensembl transcript IDs: ENST00000431311.1, ENST00000649079.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCCTCTGGACCCCACCCGAGTGCCCGGTGCTGCGGTCCGTCTCCTaGGCTCAGCAAGCACACTCACCATCGCCACCCCGTCTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: LLWTPPECPVLRSVS*AQQAHSPSPPRLQD Trigger: GTCCTGGAGACGGGGTGGCGATGGTGAGTGTGCTTGCTGAGCCCAGGAGACGGACCGCAGCACCGGGCACTCGGGTGGGGTCCAGAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649079.1 |
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| CDS CCA 90 bp | CTGGCGGAGGCCAGATGCCATGCAGGTGGGGAGGAAGGGACTCCCTaGGAGTGCCCAGCCTGGGATTTGGTAACAGAGTCCCCTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LAEARCHAGGEEGTP*ECPAWDLVTESPPS Trigger: AGAGGGAGGGGACTCTGTTACCAAATCCCAGGCTGGGCACTCCCAGGGAGTCCCTTCCTCCCCACCTGCATGGCATCTGGCCTCCGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 90 bp | GTGGAGAGGAGCCACAGCTGGTATATCTGGCAGCCAGGCAGGAGCTaGCGGAGGCCAGATGCCATGCAGGTGGGGAGGAAGGGACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: VERSHSWYIWQPGRS*RRPDAMQVGRKGLP Trigger: AGGGAGTCCCTTCCTCCCCACCTGCATGGCATCTGGCCTCCGCCAGCTCCTGCCTGGCTGCCAGATATACCAGCTGTGGCTCCTCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 90 bp | TTATACCTGGCAGAACTGAGTCTGTCCCAGGGCTCTTTGAGCACCTaGGGATGCAGAAGCTGGCGGGGTGGGAGGTGGCGGGGACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LYLAELSLSQGSLST*GCRSWRGGRWRGLW Trigger: CCACAGTCCCCGCCACCTCCCACCCCGCCAGCTTCTGCATCCCCAGGTGCTCAAAGAGCCCTGGGACAGACTCAGTTCTGCCAGGTATAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS TCA 90 bp | ACAGCAACCAGCACAGCCCTTGTGTGGTGGAGGTGCCGGGCATACTaGGATGCATCTGTCAGCATCTGCCTCCTGGTACCTTGGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: TATSTALVWWRCRAY*DASVSICLLVPWAC Trigger: GCAGGCCCAAGGTACCAGGAGGCAGATGCTGACAGATGCATCTCAGTATGCCCGGCACCTCCACCACACAAGGGCTGTGCTGGTTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 90 bp | GGCCTGGGTCCAGCGTGGTCACCAGCTCATTCACGCGCCTTTCATTaGTCTCCTCCCCTTCCCAGTCTCACTTCTCCACTCCCTACTGGA | + |
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Preference number: 5 (lower is better) Translates to: GLGPAWSPAHSRAFH*SPPLPSLTSPLPTG Trigger: TCCAGTAGGGAGTGGAGAAGTGAGACTGGGAAGGGGAGGAGAGCAATGAAAGGCGCGTGAATGAGCTGGTGACCACGCTGGACCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 90 bp | AACCAGCACAGCCCTTGTGTGGTGGAGGTGCCGGGCATACTGAGATaGATCTGTCAGCATCTGCCTCCTGGTACCTTGGGCCTGCATGTC | + |
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Preference number: 5 (lower is better) Translates to: NQHSPCVVEVPGILR*ICQHLPPGTLGLHV Trigger: GACATGCAGGCCCAAGGTACCAGGAGGCAGATGCTGACAGATGCATCTCAGTATGCCCGGCACCTCCACCACACAAGGGCTGTGCTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 90 bp | CCACAGTCACCGGACCGTGCTGCCGCCCTGGTGGGAGGATGTGTCTaGCTGCACAGGTTGAACAATCTCAAGACACCTTGCTGGAATTGG | + |
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Preference number: 5 (lower is better) Translates to: PQSPDRAAALVGGCV*LHRLNNLKTPCWNW Trigger: CCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCAGACACATCCTCCCACCAGGGCGGCAGCACGGTCCGGTGACTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 90 bp | TCCTGGAGAGGACACCTGGCCTGGAGCCAACCTTCCTCTCCTCGCTaGCAAAGCTCTGCTCTCTGGGTTCTGGCACTGTCTGAAAATTCC | + |
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Preference number: 5 (lower is better) Translates to: SWRGHLAWSQPSSPR*QSSALWVLALSENS Trigger: GGAATTTTCAGACAGTGCCAGAACCCAGAGAGCAGAGCTTTGGCAGCGAGGAGAGGAAGGTTGGCTCCAGGCCAGGTGTCCTCTCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 90 bp | ACAAGACCCCACAAGAAGAGGAGGAGTTGCTTTCTTGAACTGCTGTaGTTTTACCCACAGTCACCGGACCGTGCTGCCGCCCTGGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: TRPHKKRRSCFLELL*FYPQSPDRAAALVG Trigger: TCCCACCAGGGCGGCAGCACGGTCCGGTGACTGTGGGTAAAACCACAGCAGTTCAAGAAAGCAACTCCTCCTCTTCTTGTGGGGTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS TCA 90 bp | ACCGTGCTGCCGCCCTGGTGGGAGGATGTGTCTGCCTGCACAGGTTaGACAATCTCAAGACACCTTGCTGGAATTGGCAGAACATTGAGC | + |
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Preference number: 5 (lower is better) Translates to: TVLPPWWEDVSACTG*TISRHLAGIGRTLS Trigger: GCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCAGACACATCCTCCCACCAGGGCGGCAGCACGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 90 bp | GGCAGTCCTGCCCTGCCCTCTAGAACCGAAAGTCTGGACAGGGAGTaGCAGTTAAATGTGGGGCAGAATGAGATCAATGTCTCCAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: GSPALPSRTESLDRE*QLNVGQNEINVSKG Trigger: CCCCTTGGAGACATTGATCTCATTCTGCCCCACATTTAACTGCCACTCCCTGTCCAGACTTTCGGTTCTAGAGGGCAGGGCAGGACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 90 bp | TTGTGTTTGCTGTCTTCTCCCTCCAGCATTATCCGTTTTGTGCCCTaGAGCATTCCCACAGCAACCAGCACAGCCCTTGTGTGGTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LCLLSSPSSIIRFVP*SIPTATSTALVWWR Trigger: CCTCCACCACACAAGGGCTGTGCTGGTTGCTGTGGGAATGCTGCAGGGCACAAAACGGATAATGCTGGAGGGAGAAGACAGCAAACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 90 bp | GAGCCTTGTGTTTGCTGTCTTCTCCCTCCAGCATTATCCGTTTTGTaGCCTGCAGCATTCCCACAGCAACCAGCACAGCCCTTGTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: EPCVCCLLPPALSVL*PAAFPQQPAQPLCG Trigger: ACCACACAAGGGCTGTGCTGGTTGCTGTGGGAATGCTGCAGGGCACAAAACGGATAATGCTGGAGGGAGAAGACAGCAAACACAAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS TCA 90 bp | AACCGAAAGTCTGGACAGGGAGTGGCAGTTAAATGTGGGGCAGAATaGGATCAATGTCTCCAAGGGGTAACCCTGTCATCCTCTCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: NRKSGQGVAVKCGAE*DQCLQGVTLSSSPL Trigger: CAAGGGAGAGGATGACAGGGTTACCCCTTGGAGACATTGATCTCATTCTGCCCCACATTTAACTGCCACTCCCTGTCCAGACTTTCGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS TCA 90 bp | TGGGTAGGTCACTCAATGAGACGCCAAGCCTCAGTTTCCTCATCTTaGCTGTCCCATTTAAAAGTGCACCCCGACATTCTGCATGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: WVGHSMRRQASVSSS*LSHLKVHPDILHGG Trigger: GCCACCATGCAGAATGTCGGGGTGCACTTTTAAATGGGACAGTCAAGATGAGGAAACTGAGGCTTGGCGTCTCATTGAGTGACCTACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649079.1 |
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| CDS GCA 90 bp | GGAGGATGTGTCTGCCTGCACAGGTTGAACAATCTCAAGACACCTTaGTGGAATTGGCAGAACATTGAGCTCATTCGGTCACTACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GGCVCLHRLNNLKTP*WNWQNIELIRSLPG Trigger: CCCTGGTAGTGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCAGACACATCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 90 bp | GTCTGCCTGCACAGGTTGAACAATCTCAAGACACCTTGCTGGAATTaGCAGAACATTGAGCTCATTCGGTCACTACCAGGGCTATCAGGC | + |
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Preference number: 5 (lower is better) Translates to: VCLHRLNNLKTPCWN*QNIELIRSLPGLSG Trigger: GCCTGATAGCCCTGGTAGTGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 90 bp | GGATGTGTCTGCCTGCACAGGTTGAACAATCTCAAGACACCTTGCTaGAATTGGCAGAACATTGAGCTCATTCGGTCACTACCAGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: GCVCLHRLNNLKTPC*NWQNIELIRSLPGL Trigger: TAGCCCTGGTAGTGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCAGACACATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 90 bp | TGCATGTCCTCTTCTTACATACTGGAGTTTCTTGAGCCTTGTGTTTaGTGTCTTCTCCCTCCAGCATTATCCGTTTTGTGCCCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CMSSSYILEFLEPCV*CLLPPALSVLCPAA Trigger: TGCTGCAGGGCACAAAACGGATAATGCTGGAGGGAGAAGACAGCAAACACAAGGCTCAAGAAACTCCAGTATGTAAGAAGAGGACATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 90 bp | ACTCCAGCTCACTGTCTTTACTGCCACAGCCACTGCTTCTACATTTaGTATCTCATTGGATCATGGCGCCTTGAACAAAAGTGTCCTTAC | + |
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Preference number: 5 (lower is better) Translates to: TPAHCLYCHSHCFYI*YLIGSWRLEQKCPY Trigger: GTAAGGACACTTTTGTTCAAGGCGCCATGATCCAATGAGATAGCAAATGTAGAAGCAGTGGCTGTGGCAGTAAAGACAGTGAGCTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS TCA 90 bp | CCCTCTTCCATTGTGCATGTCCTCTTCTTACATACTGGAGTTTCTTaGGCCTTGTGTTTGCTGTCTTCTCCCTCCAGCATTATCCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: PSSIVHVLFLHTGVS*ALCLLSSPSSIIRF Trigger: AAAACGGATAATGCTGGAGGGAGAAGACAGCAAACACAAGGCTCAAGAAACTCCAGTATGTAAGAAGAGGACATGCACAATGGAAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 90 bp | CTGCTCTCTGGGTTCTGGCACTGTCTGAAAATTCCTCCGTTGGTCTaGTCTCGGCAGAGCATAGATTATCACTCTTGTGCTAATTATTTT | + |
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Preference number: 5 (lower is better) Translates to: LLSGFWHCLKIPPLV*SRQSIDYHSCANYF Trigger: AAAATAATTAGCACAAGAGTGATAATCTATGCTCTGCCGAGAGCAGACCAACGGAGGAATTTTCAGACAGTGCCAGAACCCAGAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 72 bp | ACCCCACCCGAGTGCCCGGTGCTGCGGTCCGTCTCCTaGGCTCAGCAAGCACACTCACCATCGCCACCCCGT | + |
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Preference number: 6 (lower is better) Translates to: TPPECPVLRSVS*AQQAHSPSPPR Trigger: ACGGGGTGGCGATGGTGAGTGTGCTTGCTGAGCCCAGGAGACGGACCGCAGCACCGGGCACTCGGGTGGGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649079.1 |
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| CDS CCA 72 bp | GGTGGGGAGGAAGGGACTCCCTGGGAGTGCCCAGCCTaGGATTTGGTAACAGAGTCCCCTCCCTCTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GGEEGTPWECPA*DLVTESPPSLL Trigger: GAGCAGAGAGGGAGGGGACTCTGTTACCAAATCCCAGGCTGGGCACTCCCAGGGAGTCCCTTCCTCCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 90 bp | CCACACGGCTTATACCTGGCAGAACTGAGTCTGTCCCAGGGCTCTTaGAGCACCTGGGGATGCAGAAGCTGGCGGGGTGGGAGGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PHGLYLAELSLSQGS*STWGCRSWRGGRWR Trigger: CCGCCACCTCCCACCCCGCCAGCTTCTGCATCCCCAGGTGCTCAAAGAGCCCTGGGACAGACTCAGTTCTGCCAGGTATAAGCCGTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 72 bp | ACTGCTGTGGTTTTACCCACAGTCACCGGACCGTGCTaGCGCCCTGGTGGGAGGATGTGTCTGCCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: TAVVLPTVTGPC*RPGGRMCLPAQ Trigger: CTGTGCAGGCAGACACATCCTCCCACCAGGGCGGCAGCACGGTCCGGTGACTGTGGGTAAAACCACAGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 72 bp | CTCTGCTCCCAGCCTAGGACTCAGCGGAGAGCCCCTTaGTACCATCCGAACATCTGGCCTCTGGAAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LCSQPRTQRRAP*YHPNIWPLEEA Trigger: GGCCTCTTCCAGAGGCCAGATGTTCGGATGGTACCAAGGGGCTCTCCGCTGAGTCCTAGGCTGGGAGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 72 bp | GGGCTATCAGGCACAGAGGATGAGGCAGTCCTGCCCTaGCCTCTAGAACCGAAAGTCTGGACAGGGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GLSGTEDEAVLP*PLEPKVWTGSG Trigger: GCCACTCCCTGTCCAGACTTTCGGTTCTAGAGGGCAGGGCAGGACTGCCTCATCCTCTGTGCCTGATAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 72 bp | CCGGACCGTGCTGCCGCCCTGGTGGGAGGATGTGTCTaGCTGCACAGGTTGAACAATCTCAAGACACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PDRAAALVGGCV*LHRLNNLKTPC Trigger: GCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCAGACACATCCTCCCACCAGGGCGGCAGCACGGTCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 90 bp | AGGCCTGGGTCCAGCGTGGTCACCAGCTCATTCACGCGCCTTTCATaGCTCTCCTCCCCTTCCCAGTCTCACTTCTCCACTCCCTACTGG | + |
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Preference number: 6 (lower is better) Translates to: RPGSSVVTSSFTRLS*LSSPSQSHFSTPYW Trigger: CCAGTAGGGAGTGGAGAAGTGAGACTGGGAAGGGGAGGAGAGCAATGAAAGGCGCGTGAATGAGCTGGTGACCACGCTGGACCCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 72 bp | GCATCTGTCAGCATCTGCCTCCTGGTACCTTGGGCCTaGATGTCTGGCAGGCAGGTAGAAGAACACGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASVSICLLVPWA*MSGRQVEEHAG Trigger: GCCAGCGTGTTCTTCTACCTGCCTGCCAGACATGCAGGCCCAAGGTACCAGGAGGCAGATGCTGACAGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 72 bp | AGCCCTTGTGTGGTGGAGGTGCCGGGCATACTGAGATaGATCTGTCAGCATCTGCCTCCTGGTACCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SPCVVEVPGILR*ICQHLPPGTLG Trigger: GCCCAAGGTACCAGGAGGCAGATGCTGACAGATGCATCTCAGTATGCCCGGCACCTCCACCACACAAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CAA 90 bp | CCGGGCATACTGAGATGCATCTGTCAGCATCTGCCTCCTGGTACCTaGGGCCTGCATGTCTGGCAGGCAGGTAGAAGAACACGCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGILRCICQHLPPGT*GLHVWQAGRRTRWP Trigger: TGGCCAGCGTGTTCTTCTACCTGCCTGCCAGACATGCAGGCCCAAGGTACCAGGAGGCAGATGCTGACAGATGCATCTCAGTATGCCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CAA 90 bp | TCCGTTTTGTGCCCTGCAGCATTCCCACAGCAACCAGCACAGCCCTaGTGTGGTGGAGGTGCCGGGCATACTGAGATGCATCTGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SVLCPAAFPQQPAQP*CGGGAGHTEMHLSA Trigger: TGCTGACAGATGCATCTCAGTATGCCCGGCACCTCCACCACACAAGGGCTGTGCTGGTTGCTGTGGGAATGCTGCAGGGCACAAAACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS TCA 72 bp | AGCACAGCCCTTGTGTGGTGGAGGTGCCGGGCATACTaGGATGCATCTGTCAGCATCTGCCTCCTGGTACCT | + |
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Preference number: 6 (lower is better) Translates to: STALVWWRCRAY*DASVSICLLVP Trigger: AGGTACCAGGAGGCAGATGCTGACAGATGCATCTCAGTATGCCCGGCACCTCCACCACACAAGGGCTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CCA 72 bp | CAGCATCTGCCTCCTGGTACCTTGGGCCTGCATGTCTaGCAGGCAGGTAGAAGAACACGCTGGCCATTTCAA | + |
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Preference number: 6 (lower is better) Translates to: QHLPPGTLGLHV*QAGRRTRWPFQ Trigger: TTGAAATGGCCAGCGTGTTCTTCTACCTGCCTGCCAGACATGCAGGCCCAAGGTACCAGGAGGCAGATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 72 bp | CTGTCTTCTCCCTCCAGCATTATCCGTTTTGTGCCCTaGAGCATTCCCACAGCAACCAGCACAGCCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSSPSSIIRFVP*SIPTATSTALV Trigger: CACAAGGGCTGTGCTGGTTGCTGTGGGAATGCTGCAGGGCACAAAACGGATAATGCTGGAGGGAGAAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CCA 72 bp | CCTCTCCTCGCTGCCAAAGCTCTGCTCTCTGGGTTCTaGCACTGTCTGAAAATTCCTCCGTTGGTCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PLLAAKALLSGF*HCLKIPPLVCS Trigger: AGAGCAGACCAACGGAGGAATTTTCAGACAGTGCCAGAACCCAGAGAGCAGAGCTTTGGCAGCGAGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 72 bp | CACAAGAAGAGGAGGAGTTGCTTTCTTGAACTGCTGTaGTTTTACCCACAGTCACCGGACCGTGCTGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: HKKRRSCFLELL*FYPQSPDRAAA Trigger: GGCGGCAGCACGGTCCGGTGACTGTGGGTAAAACCACAGCAGTTCAAGAAAGCAACTCCTCCTCTTCTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 72 bp | CTGAGATGCATCTGTCAGCATCTGCCTCCTGGTACCTaGGGCCTGCATGTCTGGCAGGCAGGTAGAAGAACA | + |
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Preference number: 6 (lower is better) Translates to: LRCICQHLPPGT*GLHVWQAGRRT Trigger: TGTTCTTCTACCTGCCTGCCAGACATGCAGGCCCAAGGTACCAGGAGGCAGATGCTGACAGATGCATCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CAA 90 bp | CTTGAGCCTTGTGTTTGCTGTCTTCTCCCTCCAGCATTATCCGTTTaGTGCCCTGCAGCATTCCCACAGCAACCAGCACAGCCCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LEPCVCCLLPPALSV*CPAAFPQQPAQPLC Trigger: ACACAAGGGCTGTGCTGGTTGCTGTGGGAATGCTGCAGGGCACAAAACGGATAATGCTGGAGGGAGAAGACAGCAAACACAAGGCTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CCA 72 bp | GCCCTGCCCTCTAGAACCGAAAGTCTGGACAGGGAGTaGCAGTTAAATGTGGGGCAGAATGAGATCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: ALPSRTESLDRE*QLNVGQNEINV Trigger: GACATTGATCTCATTCTGCCCCACATTTAACTGCCACTCCCTGTCCAGACTTTCGGTTCTAGAGGGCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 72 bp | CGTCCACACCCTCTTCTCAGCACTACCGTATTCCCCTaGGAGGCAGGTCCTGTAAGAGTAAGGGAATTAATC | + |
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Preference number: 6 (lower is better) Translates to: RPHPLLSTTVFP*EAGPVRVRELI Trigger: GATTAATTCCCTTACTCTTACAGGACCTGCCTCCCAGGGGAATACGGTAGTGCTGAGAAGAGGGTGTGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649079.1 |
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| CDS CAA 72 bp | TGTGTTTGCTGTCTTCTCCCTCCAGCATTATCCGTTTaGTGCCCTGCAGCATTCCCACAGCAACCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: CVCCLLPPALSV*CPAAFPQQPAQ Trigger: CTGTGCTGGTTGCTGTGGGAATGCTGCAGGGCACAAAACGGATAATGCTGGAGGGAGAAGACAGCAAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CAA 90 bp | GCTCCAGCTGATACTTTAATGCTGTTCCCCTCTCCAAATGCAGACTaGGGAGCACCCCAAGTGTCTAAAGGAAGGCCGGAGACCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: APADTLMLFPSPNAD*GAPQVSKGRPETRI Trigger: AATCCTGGTCTCCGGCCTTCCTTTAGACACTTGGGGTGCTCCCAAGTCTGCATTTGGAGAGGGGAACAGCATTAAAGTATCAGCTGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS TCA 72 bp | TCTGGACAGGGAGTGGCAGTTAAATGTGGGGCAGAATaGGATCAATGTCTCCAAGGGGTAACCCTGTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SGQGVAVKCGAE*DQCLQGVTLSS Trigger: GGATGACAGGGTTACCCCTTGGAGACATTGATCTCATTCTGCCCCACATTTAACTGCCACTCCCTGTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS TCA 72 bp | TACAAGACCCCACAAGAAGAGGAGGAGTTGCTTTCTTaGACTGCTGTGGTTTTACCCACAGTCACCGGACCG | + |
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Preference number: 6 (lower is better) Translates to: YKTPQEEEELLS*TAVVLPTVTGP Trigger: CGGTCCGGTGACTGTGGGTAAAACCACAGCAGTTCAAGAAAGCAACTCCTCCTCTTCTTGTGGGGTCTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 72 bp | AAGGCAATGCGAGGTAAAGACAGAAGTGGCTTTATGTaGTCCTCTCGTCAGCTTTGCTGTCCCTGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KAMRGKDRSGFM*SSRQLCCPCRR Trigger: CCTCCTGCAGGGACAGCAAAGCTGACGAGAGGACAACATAAAGCCACTTCTGTCTTTACCTCGCATTGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649079.1 |
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| CDS CAA 90 bp | TTGGGTAGGTCACTCAATGAGACGCCAAGCCTCAGTTTCCTCATCTaGACTGTCCCATTTAAAAGTGCACCCCGACATTCTGCATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LGRSLNETPSLSFLI*TVPFKSAPRHSAWW Trigger: CCACCATGCAGAATGTCGGGGTGCACTTTTAAATGGGACAGTCAAGATGAGGAAACTGAGGCTTGGCGTCTCATTGAGTGACCTACCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649079.1 |
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| CDS TCA 72 bp | GAAGTTGCCCCCTTGGCGTCCACGTTAATTAATAAATaGGACTCTCCGTGGAGAGGAGCCACAGCTGGTATA | + |
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Preference number: 6 (lower is better) Translates to: EVAPLASTLINK*DSPWRGATAGI Trigger: TATACCAGCTGTGGCTCCTCTCCACGGAGAGTCTCATTTATTAATTAACGTGGACGCCAAGGGGGCAACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS TCA 72 bp | CAATCTCAAGACACCTTGCTGGAATTGGCAGAACATTaGGCTCATTCGGTCACTACCAGGGCTATCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QSQDTLLELAEH*AHSVTTRAIRH Trigger: GTGCCTGATAGCCCTGGTAGTGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 72 bp | GGGTTCTGGCACTGTCTGAAAATTCCTCCGTTGGTCTaGTCTCGGCAGAGCATAGATTATCACTCTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GFWHCLKIPPLV*SRQSIDYHSCA Trigger: AGCACAAGAGTGATAATCTATGCTCTGCCGAGAGCAGACCAACGGAGGAATTTTCAGACAGTGCCAGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 72 bp | CTCTCTGGGTTCTGGCACTGTCTGAAAATTCCTCCGTaGGTCTGCTCTCGGCAGAGCATAGATTATCACTCT | + |
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Preference number: 6 (lower is better) Translates to: LSGFWHCLKIPP*VCSRQSIDYHS Trigger: AGAGTGATAATCTATGCTCTGCCGAGAGCAGACCAACGGAGGAATTTTCAGACAGTGCCAGAACCCAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS GCA 72 bp | CCCGACATTCTGCATGGTGGCTTCCCTCTTCCATTGTaGATGTCCTCTTCTTACATACTGGAGTTTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PDILHGGFPLPL*MSSSYILEFLE Trigger: CTCAAGAAACTCCAGTATGTAAGAAGAGGACATGCACAATGGAAGAGGGAAGCCACCATGCAGAATGTCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 72 bp | GTCTGCCTGCACAGGTTGAACAATCTCAAGACACCTTaGTGGAATTGGCAGAACATTGAGCTCATTCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: VCLHRLNNLKTP*WNWQNIELIRS Trigger: TGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCAGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 72 bp | CACAGGTTGAACAATCTCAAGACACCTTGCTGGAATTaGCAGAACATTGAGCTCATTCGGTCACTACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HRLNNLKTPCWN*QNIELIRSLPG Trigger: CCCTGGTAGTGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 72 bp | ACAATCTCAAGACACCTTGCTGGAATTGGCAGAACATaGAGCTCATTCGGTCACTACCAGGGCTATCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TISRHLAGIGRT*SSFGHYQGYQA Trigger: TGCCTGATAGCCCTGGTAGTGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 90 bp | AAAGCTCTGCTCTCTGGGTTCTGGCACTGTCTGAAAATTCCTCCGTaGGTCTGCTCTCGGCAGAGCATAGATTATCACTCTTGTGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: KALLSGFWHCLKIPP*VCSRQSIDYHSCAN Trigger: ATTAGCACAAGAGTGATAATCTATGCTCTGCCGAGAGCAGACCAACGGAGGAATTTTCAGACAGTGCCAGAACCCAGAGAGCAGAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CCA 72 bp | TGCCTGCACAGGTTGAACAATCTCAAGACACCTTGCTaGAATTGGCAGAACATTGAGCTCATTCGGTCACTA | + |
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Preference number: 6 (lower is better) Translates to: CLHRLNNLKTPC*NWQNIELIRSL Trigger: TAGTGACCGAATGAGCTCAATGTTCTGCCAATTCCAGCAAGGTGTCTTGAGATTGTTCAACCTGTGCAGGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 90 bp | TCCCTCTTCCATTGTGCATGTCCTCTTCTTACATACTGGAGTTTCTaGAGCCTTGTGTTTGCTGTCTTCTCCCTCCAGCATTATCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLFHCACPLLTYWSF*SLVFAVFSLQHYPF Trigger: AAACGGATAATGCTGGAGGGAGAAGACAGCAAACACAAGGCTCAAGAAACTCCAGTATGTAAGAAGAGGACATGCACAATGGAAGAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 72 bp | CACTGTCTTTACTGCCACAGCCACTGCTTCTACATTTaGTATCTCATTGGATCATGGCGCCTTGAACAAAAG | + |
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Preference number: 6 (lower is better) Translates to: HCLYCHSHCFYI*YLIGSWRLEQK Trigger: CTTTTGTTCAAGGCGCCATGATCCAATGAGATAGCAAATGTAGAAGCAGTGGCTGTGGCAGTAAAGACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 72 bp | CATTGTGCATGTCCTCTTCTTACATACTGGAGTTTCTaGAGCCTTGTGTTTGCTGTCTTCTCCCTCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HCACPLLTYWSF*SLVFAVFSLQH Trigger: ATGCTGGAGGGAGAAGACAGCAAACACAAGGCTCAAGAAACTCCAGTATGTAAGAAGAGGACATGCACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS TCA 72 bp | ATTGTGCATGTCCTCTTCTTACATACTGGAGTTTCTTaGGCCTTGTGTTTGCTGTCTTCTCCCTCCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: IVHVLFLHTGVS*ALCLLSSPSSI Trigger: AATGCTGGAGGGAGAAGACAGCAAACACAAGGCTCAAGAAACTCCAGTATGTAAGAAGAGGACATGCACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS GCA 72 bp | TCTTCTTACATACTGGAGTTTCTTGAGCCTTGTGTTTaGTGTCTTCTCCCTCCAGCATTATCCGTTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSYILEFLEPCV*CLLPPALSVLC Trigger: GCACAAAACGGATAATGCTGGAGGGAGAAGACAGCAAACACAAGGCTCAAGAAACTCCAGTATGTAAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431311.1 ENST00000649079.1 |
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| CDS CAA 72 bp | TATAGTAATGCTCTACATAGCTGCCAGGATGATCCCTaGACTGTCCCATTTAAAAGTGCACCCCGACATTCT | + |
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Preference number: 6 (lower is better) Translates to: YSNALHSCQDDP*TVPFKSAPRHS Trigger: AGAATGTCGGGGTGCACTTTTAAATGGGACAGTCAAGGGATCATCCTGGCAGCTATGTAGAGCATTACTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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| CDS CAA 72 bp | GCTTCTACATTTGCTATCTCATTGGATCATGGCGCCTaGAACAAAAGTGTCCTTACTCATTATCTAATTGAA | + |
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Preference number: 6 (lower is better) Translates to: ASTFAISLDHGA*NKSVLTHYLIE Trigger: TTCAATTAGATAATGAGTAAGGACACTTTTGTTCAAGGCGCCATGATCCAATGAGATAGCAAATGTAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431311.1 |
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