Pregenerated sensors for LINC01335 (Homo sapiens)
Ensembl gene IDs: ENSG00000248942Ensembl transcript IDs: ENST00000507890.2, ENST00000651573.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATGAAGTCCTCTTGTCCTGCCACTCTGTGCGAGGAGCAGTGTCTCTaGGGTGCCAAGGCCAGAAGATGCCATTTTGGTCCTTTGACATCC | + |
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Preference number: 5 (lower is better) Translates to: MKSSCPATLCEEQCL*GAKARRCHFGPLTS Trigger: GGATGTCAAAGGACCAAAATGGCATCTTCTGGCCTTGGCACCTCAGAGACACTGCTCCTCGCACAGAGTGGCAGGACAAGAGGACTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507890.2 |
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| CDS GCA 90 bp | GTCCTCTTGTCCTGCCACTCTGTGCGAGGAGCAGTGTCTCTGAGGTaGCAAGGCCAGAAGATGCCATTTTGGTCCTTTGACATCCTAATC | + |
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Preference number: 5 (lower is better) Translates to: VLLSCHSVRGAVSLR*QGQKMPFWSFDILI Trigger: GATTAGGATGTCAAAGGACCAAAATGGCATCTTCTGGCCTTGGCACCTCAGAGACACTGCTCCTCGCACAGAGTGGCAGGACAAGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507890.2 |
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| CDS GCA 90 bp | ACATCTCAGCACTGCCTCTGGACATCTGTGCAACCATGTACAAGTTaGCCAGCCTCTCTGTGTACAAGTCTCTTCTCACGCTGCTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: TSQHCLWTSVQPCTS*PASLCTSLFSRCSQ Trigger: TTGGGAGCAGCGTGAGAAGAGACTTGTACACAGAGAGGCTGGGCAACTTGTACATGGTTGCACAGATGTCCAGAGGCAGTGCTGAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 90 bp | CCAGTCTTCCTGTGTTCACATCTCAGCACTGCCTCTGGACATCTGTaGAACCATGTACAAGTTGCCCAGCCTCTCTGTGTACAAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVFLCSHLSTASGHL*NHVQVAQPLCVQVS Trigger: AGAGACTTGTACACAGAGAGGCTGGGCAACTTGTACATGGTTGCACAGATGTCCAGAGGCAGTGCTGAGATGTGAACACAGGAAGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 90 bp | AGCACAGATGCTGAATCCAGTCTTCCTGTGTTCACATCTCAGCACTaGCTCTGGACATCTGTGCAACCATGTACAAGTTGCCCAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: STDAESSLPVFTSQH*LWTSVQPCTSCPAS Trigger: AGAGGCTGGGCAACTTGTACATGGTTGCACAGATGTCCAGAGGCAGTGCTGAGATGTGAACACAGGAAGACTGGATTCAGCATCTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 90 bp | CAGATGTGTTGGCATCCAGAATACACTCCCATTCTCTACCTGCAATaGCCTGCCCTCTATTTCCAAACATCCAACTCCTACCGGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QMCWHPEYTPILYLQ*PALYFQTSNSYRFL Trigger: GAGGAACCGGTAGGAGTTGGATGTTTGGAAATAGAGGGCAGGGCATTGCAGGTAGAGAATGGGAGTGTATTCTGGATGCCAACACATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 90 bp | GATACAGACCATCTATTCCTGATCTTAGGACCGCCACAGATGTGTTaGCATCCAGAATACACTCCCATTCTCTACCTGCAATGCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: DTDHLFLILGPPQMC*HPEYTPILYLQCPA Trigger: GGCAGGGCATTGCAGGTAGAGAATGGGAGTGTATTCTGGATGCCAACACATCTGTGGCGGTCCTAAGATCAGGAATAGATGGTCTGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS TCA 90 bp | ACAGGAGCTGGCTCCCCTTCACCTTTTGCCATGAGTGGAAACTTCTaGGATCTTCACCAGAAGACAACCACAGTTTGGTGTCATGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TGAGSPSPFAMSGNF*DLHQKTTTVWCHAS Trigger: AGAAGCATGACACCAAACTGTGGTTGTCTTCTGGTGAAGATCTCAGAAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 90 bp | TGTACAAGTTGCCCAGCCTCTCTGTGTACAAGTCTCTTCTCACGCTaGTCCCAAGCCAATGGGAGATCCTCTTTAGAAGCAGTAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: CTSCPASLCTSLFSR*SQANGRSSLEAVGN Trigger: ATTTCCTACTGCTTCTAAAGAGGATCTCCCATTGGCTTGGGAGCAGCGTGAGAAGAGACTTGTACACAGAGAGGCTGGGCAACTTGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 90 bp | CTCTCTCCCTCTCACTTCCTCTTGCCATGTAATCTTTACAGGAGCTaGCTCCCCTTCACCTTTTGCCATGAGTGGAAACTTCTGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: LSPSHFLLPCNLYRS*LPFTFCHEWKLLRS Trigger: AGATCTCAGAAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGTAAAGATTACATGGCAAGAGGAAGTGAGAGGGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 90 bp | CTCTTGCCATGTAATCTTTACAGGAGCTGGCTCCCCTTCACCTTTTaGCATGAGTGGAAACTTCTGAGATCTTCACCAGAAGACAACCAC | + |
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Preference number: 5 (lower is better) Translates to: LLPCNLYRSWLPFTF*HEWKLLRSSPEDNH Trigger: GTGGTTGTCTTCTGGTGAAGATCTCAGAAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGTAAAGATTACATGGCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 90 bp | CATTGTGATTTCACTTGTATCTCCTCTCTCCCTCTCACTTCCTCTTaGCATGTAATCTTTACAGGAGCTGGCTCCCCTTCACCTTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: HCDFTCISSLPLTSS*HVIFTGAGSPSPFA Trigger: GGCAAAAGGTGAAGGGGAGCCAGCTCCTGTAAAGATTACATGGCAAGAGGAAGTGAGAGGGAGAGAGGAGATACAAGTGAAATCACAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 90 bp | TGTAATCTTTACAGGAGCTGGCTCCCCTTCACCTTTTGCCATGAGTaGAAACTTCTGAGATCTTCACCAGAAGACAACCACAGTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: CNLYRSWLPFTFCHE*KLLRSSPEDNHSLV Trigger: CACCAAACTGTGGTTGTCTTCTGGTGAAGATCTCAGAAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGTAAAGATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS TCA 90 bp | AGGGGTGGAACTGCACAGGAACAAAGGTCATCTTATTATGCAAATTaGGTCCCACAGGTAATCTCTTGGAGCTGCTCTCAGGAGAATAGA | + |
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Preference number: 5 (lower is better) Translates to: RGGTAQEQRSSYYAN*VPQVISWSCSQENR Trigger: TCTATTCTCCTGAGAGCAGCTCCAAGAGATTACCTGTGGGACTCAATTTGCATAATAAGATGACCTTTGTTCCTGTGCAGTTCCACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 90 bp | AAGCATGCATCTCCAAAATGTGTGTGTATTCTGTCATGGTTTGTATaGTGGATCCTTTCTCCTGGCTTCACGGCAGATTTGGCCTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: KHASPKCVCILSWFV*WILSPGFTADLAFN Trigger: GTTAAAGGCCAAATCTGCCGTGAAGCCAGGAGAAAGGATCCAGCATACAAACCATGACAGAATACACACACATTTTGGAGATGCATGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CCA 90 bp | CTCCTGGCTTCACGGCAGATTTGGCCTTTAACTATATGGCAGATTTaGCCTTTAACTCTACCATTAAACCAACTGAGTATGATTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LLASRQIWPLTIWQI*PLTLPLNQLSMISG Trigger: CCCAGAAATCATACTCAGTTGGTTTAATGGTAGAGTTAAAGGCCAAATCTGCCATATAGTTAAAGGCCAAATCTGCCGTGAAGCCAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CCA 90 bp | CATGCATCTCCAAAATGTGTGTGTATTCTGTCATGGTTTGTATGCTaGATCCTTTCTCCTGGCTTCACGGCAGATTTGGCCTTTAACTAT | + |
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Preference number: 5 (lower is better) Translates to: HASPKCVCILSWFVC*ILSPGFTADLAFNY Trigger: ATAGTTAAAGGCCAAATCTGCCGTGAAGCCAGGAGAAAGGATCCAGCATACAAACCATGACAGAATACACACACATTTTGGAGATGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 90 bp | CAGTTAATATGTCTTCATGATGGTCCTCAGAGCTTTGAGAAAGCATaGATCTCCAAAATGTGTGTGTATTCTGTCATGGTTTGTATGCTG | + |
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Preference number: 5 (lower is better) Translates to: QLICLHDGPQSFEKA*ISKMCVYSVMVCML Trigger: CAGCATACAAACCATGACAGAATACACACACATTTTGGAGATGCATGCTTTCTCAAAGCTCTGAGGACCATCATGAAGACATATTAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS TCA 90 bp | TTCAAATGGAGATTAAGTCTTACACTCAGAAACATTAAGTCATACTaGAGATACAGACCATCTATTCCTGATCTTAGGACCGCCACAGAT | + |
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Preference number: 5 (lower is better) Translates to: FKWRLSLTLRNIKSY*RYRPSIPDLRTATD Trigger: ATCTGTGGCGGTCCTAAGATCAGGAATAGATGGTCTGTATCTTCAGTATGACTTAATGTTTCTGAGTGTAAGACTTAATCTCCATTTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CAA 90 bp | TGTCCCCTCCCACAAAATCTGGACCCATGGCAGGATGAAGTCCTCTaGTCCTGCCACTCTGTGCGAGGAGCAGTGTCTCTGAGGTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: CPLPQNLDPWQDEVL*SCHSVRGAVSLRCQ Trigger: TTGGCACCTCAGAGACACTGCTCCTCGCACAGAGTGGCAGGACAAGAGGACTTCATCCTGCCATGGGTCCAGATTTTGTGGGAGGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507890.2 |
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| CDS TCA 72 bp | GAATCTAAGCCCTGCACCCTGGAGTGGAGGCATGAGTaGGTCACTCTGCTAGGAGGGAAACTGCCACCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ESKPCTLEWRHE*VTLLGGKLPPS Trigger: AGAGGGTGGCAGTTTCCCTCCTAGCAGAGTGACTCACTCATGCCTCCACTCCAGGGTGCAGGGCTTAGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 72 bp | TCCTGCCACTCTGTGCGAGGAGCAGTGTCTCTGAGGTaGCAAGGCCAGAAGATGCCATTTTGGTCCTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: SCHSVRGAVSLR*QGQKMPFWSFD Trigger: GTCAAAGGACCAAAATGGCATCTTCTGGCCTTGGCACCTCAGAGACACTGCTCCTCGCACAGAGTGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507890.2 |
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| CDS CAA 72 bp | CCACAAAATCTGGACCCATGGCAGGATGAAGTCCTCTaGTCCTGCCACTCTGTGCGAGGAGCAGTGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PQNLDPWQDEVL*SCHSVRGAVSL Trigger: CAGAGACACTGCTCCTCGCACAGAGTGGCAGGACAAGAGGACTTCATCCTGCCATGGGTCCAGATTTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507890.2 |
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| CDS GCA 72 bp | GTGAGTCACTCTGCTAGGAGGGAAACTGCCACCCTCTaGATCTCAACATTGCCTTGTGGTTCTCTGCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VSHSARRETATL*ISTLPCGSLLV Trigger: GACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGGTGGCAGTTTCCCTCCTAGCAGAGTGACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 72 bp | TGCCCAGCCTCTCTGTGTACAAGTCTCTTCTCACGCTaGTCCCAAGCCAATGGGAGATCCTCTTTAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: CPASLCTSLFSR*SQANGRSSLEA Trigger: TGCTTCTAAAGAGGATCTCCCATTGGCTTGGGAGCAGCGTGAGAAGAGACTTGTACACAGAGAGGCTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 72 bp | CACTGCCTCTGGACATCTGTGCAACCATGTACAAGTTaGCCAGCCTCTCTGTGTACAAGTCTCTTCTCACGC | + |
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Preference number: 6 (lower is better) Translates to: HCLWTSVQPCTS*PASLCTSLFSR Trigger: GCGTGAGAAGAGACTTGTACACAGAGAGGCTGGGCAACTTGTACATGGTTGCACAGATGTCCAGAGGCAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CAA 72 bp | GCTAGGAGGGAAACTGCCACCCTCTGCATCTCAACATaGCCTTGTGGTTCTCTGCTTGTCATTTCGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: ARRETATLCIST*PCGSLLVISEA Trigger: TGCCTCCGAAATGACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGGTGGCAGTTTCCCTCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 72 bp | CTGTGTTCACATCTCAGCACTGCCTCTGGACATCTGTaGAACCATGTACAAGTTGCCCAGCCTCTCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: LCSHLSTASGHL*NHVQVAQPLCV Trigger: TACACAGAGAGGCTGGGCAACTTGTACATGGTTGCACAGATGTCCAGAGGCAGTGCTGAGATGTGAACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CAA 90 bp | AGTCACTCTGCTAGGAGGGAAACTGCCACCCTCTGCATCTCAACATaGCCTTGTGGTTCTCTGCTTGTCATTTCGGAGGCAAAAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: SHSARRETATLCIST*PCGSLLVISEAKTL Trigger: GAGAGTTTTTGCCTCCGAAATGACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGGTGGCAGTTTCCCTCCTAGCAGAGTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 72 bp | GCTGAATCCAGTCTTCCTGTGTTCACATCTCAGCACTaGCTCTGGACATCTGTGCAACCATGTACAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: AESSLPVFTSQH*LWTSVQPCTSC Trigger: GCAACTTGTACATGGTTGCACAGATGTCCAGAGGCAGTGCTGAGATGTGAACACAGGAAGACTGGATTCAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 72 bp | TACAGGAGCTGGCTCCCCTTCACCTTTTGCCATGAGTaGAAACTTCTGAGATCTTCACCAGAAGACAACCAC | + |
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Preference number: 6 (lower is better) Translates to: YRSWLPFTFCHE*KLLRSSPEDNH Trigger: GTGGTTGTCTTCTGGTGAAGATCTCAGAAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CAA 72 bp | GAGGGAAACTGCCACCCTCTGCATCTCAACATTGCCTaGTGGTTCTCTGCTTGTCATTTCGGAGGCAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: EGNCHPLHLNIA*WFSACHFGGKN Trigger: GTTTTTGCCTCCGAAATGACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGGTGGCAGTTTCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CAA 90 bp | AGATACAGACCATCTATTCCTGATCTTAGGACCGCCACAGATGTGTaGGCATCCAGAATACACTCCCATTCTCTACCTGCAATGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RYRPSIPDLRTATDV*ASRIHSHSLPAMPC Trigger: GCAGGGCATTGCAGGTAGAGAATGGGAGTGTATTCTGGATGCCAACACATCTGTGGCGGTCCTAAGATCAGGAATAGATGGTCTGTATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS TCA 72 bp | CAGGTAATCTCTTGGAGCTGCTCTCAGGAGAATAGATaGAAAGTCTGTCTGGGCAGGGTGAAGATTCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: QVISWSCSQENR*KVCLGRVKIPS Trigger: ACTGGGAATCTTCACCCTGCCCAGACAGACTTTTCATCTATTCTCCTGAGAGCAGCTCCAAGAGATTACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 72 bp | TGGCATCCAGAATACACTCCCATTCTCTACCTGCAATaGCCTGCCCTCTATTTCCAAACATCCAACTCCTAC | + |
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Preference number: 6 (lower is better) Translates to: WHPEYTPILYLQ*PALYFQTSNSY Trigger: GTAGGAGTTGGATGTTTGGAAATAGAGGGCAGGGCATTGCAGGTAGAGAATGGGAGTGTATTCTGGATGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 72 bp | GGAAACTGCCACCCTCTGCATCTCAACATTGCCTTGTaGTTCTCTGCTTGTCATTTCGGAGGCAAAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: GNCHPLHLNIAL*FSACHFGGKNS Trigger: AGAGTTTTTGCCTCCGAAATGACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGGTGGCAGTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS TCA 72 bp | TCTTTACAGGAGCTGGCTCCCCTTCACCTTTTGCCATaGGTGGAAACTTCTGAGATCTTCACCAGAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: SLQELAPLHLLP*VETSEIFTRRQ Trigger: TTGTCTTCTGGTGAAGATCTCAGAAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGTAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS GCA 72 bp | CCACCCTCTGCATCTCAACATTGCCTTGTGGTTCTCTaGTTGTCATTTCGGAGGCAAAAACTCTCTTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: PPSASQHCLVVL*LSFRRQKLSLC Trigger: ACACAAAGAGAGTTTTTGCCTCCGAAATGACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CCA 72 bp | TCTCACTTCCTCTTGCCATGTAATCTTTACAGGAGCTaGCTCCCCTTCACCTTTTGCCATGAGTGGAAACTT | + |
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Preference number: 6 (lower is better) Translates to: SHFLLPCNLYRS*LPFTFCHEWKL Trigger: AAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGTAAAGATTACATGGCAAGAGGAAGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 72 bp | CATCTATTCCTGATCTTAGGACCGCCACAGATGTGTTaGCATCCAGAATACACTCCCATTCTCTACCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: HLFLILGPPQMC*HPEYTPILYLQ Trigger: TTGCAGGTAGAGAATGGGAGTGTATTCTGGATGCCAACACATCTGTGGCGGTCCTAAGATCAGGAATAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CAA 90 bp | AAACTGCCACCCTCTGCATCTCAACATTGCCTTGTGGTTCTCTGCTaGTCATTTCGGAGGCAAAAACTCTCTTTGTGTTTCACTTCAACC | + |
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Preference number: 6 (lower is better) Translates to: KLPPSASQHCLVVLC*SFRRQKLSLCFTST Trigger: GGTTGAAGTGAAACACAAAGAGAGTTTTTGCCTCCGAAATGACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGGTGGCAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 72 bp | GGGTGGAACTGCACAGGAACAAAGGTCATCTTATTATaGAAATTGAGTCCCACAGGTAATCTCTTGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GWNCTGTKVILL*KLSPTGNLLEL Trigger: CAGCTCCAAGAGATTACCTGTGGGACTCAATTTGCATAATAAGATGACCTTTGTTCCTGTGCAGTTCCACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS GCA 72 bp | TGTAATCTTTACAGGAGCTGGCTCCCCTTCACCTTTTaGCATGAGTGGAAACTTCTGAGATCTTCACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: CNLYRSWLPFTF*HEWKLLRSSPE Trigger: TTCTGGTGAAGATCTCAGAAGTTTCCACTCATGGCAAAAGGTGAAGGGGAGCCAGCTCCTGTAAAGATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 72 bp | GTGTACAAGTCTCTTCTCACGCTGCTCCCAAGCCAATaGGAGATCCTCTTTAGAAGCAGTAGGAAATATCTT | + |
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Preference number: 6 (lower is better) Translates to: VYKSLLTLLPSQ*EILFRSSRKYL Trigger: AAGATATTTCCTACTGCTTCTAAAGAGGATCTCCCATTGGCTTGGGAGCAGCGTGAGAAGAGACTTGTACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CAA 72 bp | CCCTCTGCATCTCAACATTGCCTTGTGGTTCTCTGCTaGTCATTTCGGAGGCAAAAACTCTCTTTGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSASQHCLVVLC*SFRRQKLSLCF Trigger: GAAACACAAAGAGAGTTTTTGCCTCCGAAATGACAAGCAGAGAACCACAAGGCAATGTTGAGATGCAGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CAA 72 bp | GTATGCTGGATCCTTTCTCCTGGCTTCACGGCAGATTaGGCCTTTAACTATATGGCAGATTTGGCCTTTAAC | + |
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Preference number: 6 (lower is better) Translates to: VCWILSPGFTAD*AFNYMADLAFN Trigger: GTTAAAGGCCAAATCTGCCATATAGTTAAAGGCCAAATCTGCCGTGAAGCCAGGAGAAAGGATCCAGCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS TCA 72 bp | ACTGCACAGGAACAAAGGTCATCTTATTATGCAAATTaGGTCCCACAGGTAATCTCTTGGAGCTGCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TAQEQRSSYYAN*VPQVISWSCSQ Trigger: CTGAGAGCAGCTCCAAGAGATTACCTGTGGGACTCAATTTGCATAATAAGATGACCTTTGTTCCTGTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CCA 72 bp | TATGCTGGATCCTTTCTCCTGGCTTCACGGCAGATTTaGCCTTTAACTATATGGCAGATTTGGCCTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: YAGSFLLASRQI*PLTIWQIWPLT Trigger: AGTTAAAGGCCAAATCTGCCATATAGTTAAAGGCCAAATCTGCCGTGAAGCCAGGAGAAAGGATCCAGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CCA 72 bp | AGCAGTAGGAAATATCTTGAAGGAAGGCACTTAAGGTaGCTGAGCAAGGTGGGAAAATCGGAGACTTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SSRKYLEGRHLR*LSKVGKSETFH Trigger: ATGAAAAGTCTCCGATTTTCCCACCTTGCTCAGCCACCTTAAGTGCCTTCCTTCAAGATATTTCCTACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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| CDS CCA 72 bp | CCCAGTCTCTTCTCTTCTCAGGTGATTAATCTTTCCTaGTTATTTGATGAGGTCCCTGTCATGAATCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: PSLFSSQVINLS*LFDEVPVMNLS Trigger: GCTTAGATTCATGACAGGGACCTCATCAAATAACCAGGAAAGATTAATCACCTGAGAAGAGAAGAGACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CAA 72 bp | AACTGCACAGGAACAAAGGTCATCTTATTATGCAAATaGAGTCCCACAGGTAATCTCTTGGAGCTGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: NCTGTKVILLCK*SPTGNLLELLS Trigger: TGAGAGCAGCTCCAAGAGATTACCTGTGGGACTCAATTTGCATAATAAGATGACCTTTGTTCCTGTGCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CAA 90 bp | TCTCCTGGCTTCACGGCAGATTTGGCCTTTAACTATATGGCAGATTaGGCCTTTAACTCTACCATTAAACCAACTGAGTATGATTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPGFTADLAFNYMAD*AFNSTIKPTEYDFW Trigger: CCAGAAATCATACTCAGTTGGTTTAATGGTAGAGTTAAAGGCCAAATCTGCCATATAGTTAAAGGCCAAATCTGCCGTGAAGCCAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS CAA 72 bp | TTCACGGCAGATTTGGCCTTTAACTATATGGCAGATTaGGCCTTTAACTCTACCATTAAACCAACTGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: FTADLAFNYMAD*AFNSTIKPTEY Trigger: ATACTCAGTTGGTTTAATGGTAGAGTTAAAGGCCAAATCTGCCATATAGTTAAAGGCCAAATCTGCCGTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507890.2 ENST00000651573.1 |
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| CDS TCA 72 bp | AGATTAAGTCTTACACTCAGAAACATTAAGTCATACTaGAGATACAGACCATCTATTCCTGATCTTAGGACC | + |
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Preference number: 6 (lower is better) Translates to: RLSLTLRNIKSY*RYRPSIPDLRT Trigger: GGTCCTAAGATCAGGAATAGATGGTCTGTATCTTCAGTATGACTTAATGTTTCTGAGTGTAAGACTTAATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651573.1 |
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