Pregenerated sensors for LINC01333 (Homo sapiens)
Ensembl gene IDs: ENSG00000249343Ensembl transcript IDs: ENST00000508083.2, ENST00000512458.2, ENST00000651656.1, ENST00000654284.1, ENST00000654749.1, ENST00000655255.1, ENST00000657940.1, ENST00000657950.1, ENST00000659118.1, ENST00000659684.1, ENST00000662472.1, ENST00000665644.1, ENST00000667290.1, ENST00000667820.1, ENST00000669685.1, ENST00000671086.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTGCCCTGGGCTGCACTGGTGAGATTCTCCCTGGCTCTGGGGTCATaGACGAGAATAACCGGCAGAAGAGCACCAAGGGCAGAGCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: VPWAALVRFSLALGS*TRITGRRAPRAERL Trigger: CAAACGCTCTGCCCTTGGTGCTCTTCTGCCGGTTATTCTCGTCCATGACCCCAGAGCCAGGGAGAATCTCACCAGTGCAGCCCAGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000657940.1 ENST00000659118.1 ENST00000665644.1 ENST00000667290.1 ENST00000669685.1 |
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| CDS TCA 90 bp | GTGAAGCAGGTTGTGGCTCCCCCAACACTTCGATCCTGTCCTGGGTaGGAGGTGGGGCATGGGAGGTGTATCAATCATTATCTGGACAGG | + |
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Preference number: 5 (lower is better) Translates to: VKQVVAPPTLRSCPG*EVGHGRCINHYLDR Trigger: CCTGTCCAGATAATGATTGATACACCTCCCATGCCCCACCTCTCACCCAGGACAGGATCGAAGTGTTGGGGGAGCCACAACCTGCTTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655255.1 ENST00000665644.1 |
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| CDS GCA 90 bp | CTACTGAGAGCGGTGGTACCCTTAGCATGTCTTCCTGCACTTACATaGAGCCAGGAAACTCCAGGCCATTCTCCATGGTGCGCACCTTCG | + |
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Preference number: 5 (lower is better) Translates to: LLRAVVPLACLPALT*SQETPGHSPWCAPS Trigger: CGAAGGTGCGCACCATGGAGAATGGCCTGGAGTTTCCTGGCTGCATGTAAGTGCAGGAAGACATGCTAAGGGTACCACCGCTCTCAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 90 bp | GTGAAGCAGGTTGTGGCTCCCCCAACACTTCGATCCTGTCCTGGGTaGGAGGTGGGGCATGGGAGGTGTATCAATCATTATCTAGACAGA | + |
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Preference number: 5 (lower is better) Translates to: VKQVVAPPTLRSCPG*EVGHGRCINHYLDR Trigger: TCTGTCTAGATAATGATTGATACACCTCCCATGCCCCACCTCTCACCCAGGACAGGATCGAAGTGTTGGGGGAGCCACAACCTGCTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508083.2 |
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| CDS TCA 90 bp | GTGAAGCAGGTTGTGGCTCCCCCAACACTTCGATCCTGTCCTGGGTaGGAGGTGGGGCATGGGAGGTGTATCAATCATTATCTTGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: VKQVVAPPTLRSCPG*EVGHGRCINHYLEV Trigger: CACTTCAAGATAATGATTGATACACCTCCCATGCCCCACCTCTCACCCAGGACAGGATCGAAGTGTTGGGGGAGCCACAACCTGCTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000659118.1 ENST00000662472.1 ENST00000671086.1 |
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| CDS GCA 90 bp | TCTTCTCCTTCACTCTGCTCAGATGTTATCAGAAGTGCCCTGGGCTaGACTGGTGAGATTCTCCCTGGCTCTGGGGTCATGGACGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: SSPSLCSDVIRSALG*TGEILPGSGVMDEN Trigger: ATTCTCGTCCATGACCCCAGAGCCAGGGAGAATCTCACCAGTGCAGCCCAGGGCACTTCTGATAACATCTGAGCAGAGTGAAGGAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000657940.1 ENST00000659118.1 ENST00000665644.1 ENST00000667290.1 ENST00000669685.1 |
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| CDS GCA 90 bp | TGTGCTTGCTCTACTGAGAGCGGTGGTACCCTTAGCATGTCTTCCTaGACTTACATGCAGCCAGGAAACTCCAGGCCATTCTCCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: CACSTESGGTLSMSS*TYMQPGNSRPFSMV Trigger: CACCATGGAGAATGGCCTGGAGTTTCCTGGCTGCATGTAAGTGCAGGAAGACATGCTAAGGGTACCACCGCTCTCAGTAGAGCAAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS CCA 90 bp | AGGTTGTGGCTCCCCCAACACTTCGATCCTGTCCTGGGTGAGAGGTaGGGCATGGGAGGTGTATCAATCATTATCTTGAAGTGTCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: RLWLPQHFDPVLGER*GMGGVSIIILKCLR Trigger: ACGAAGACACTTCAAGATAATGATTGATACACCTCCCATGCCCCACCTCTCACCCAGGACAGGATCGAAGTGTTGGGGGAGCCACAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659118.1 ENST00000662472.1 ENST00000671086.1 |
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| CDS GCA 90 bp | GGCTTGACCCAGAGGAGCACTTCCATAAATGAGATGCCTGCCTCGTaGGTTTCTTCTCCTTCACTCTGCTCAGATGTTATCAGAAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: GLTQRSTSINEMPAS*VSSPSLCSDVIRSA Trigger: GGCACTTCTGATAACATCTGAGCAGAGTGAAGGAGAAGAAACGCACGAGGCAGGCATCTCATTTATGGAAGTGCTCCTCTGGGTCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000657940.1 ENST00000659118.1 ENST00000665644.1 ENST00000667290.1 ENST00000669685.1 |
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| CDS TCA 90 bp | AAAATTATTGGCAGAGGGCTTGACCCAGAGGAGCACTTCCATAAATaGGATGCCTGCCTCGTGCGTTTCTTCTCCTTCACTCTGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: KIIGRGLDPEEHFHK*DACLVRFFSFTLLR Trigger: TCTGAGCAGAGTGAAGGAGAAGAAACGCACGAGGCAGGCATCTCATTTATGGAAGTGCTCCTCTGGGTCAAGCCCTCTGCCAATAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000657940.1 ENST00000659118.1 ENST00000665644.1 ENST00000667290.1 ENST00000669685.1 |
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| CDS TCA 90 bp | CAAGCCGAAGCCCTCCCCATAAACAACCCCCTACTGGTTGAATACTaGGGTGACACACTCAGTTGCATCAGCTCTAAGATTCAGGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: QAEALPINNPLLVEY*GDTLSCISSKIQVN Trigger: ATTGACCTGAATCTTAGAGCTGATGCAACTGAGTGTGTCACCTCAGTATTCAACCAGTAGGGGGTTGTTTATGGGGAGGGCTTCGGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654749.1 |
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| CDS TCA 90 bp | GGCAGGTTTTCTTTCTTAAGTGATGACAAAGGTGGCCCTTGCCAGTaGAAGGCCACACTGTTGGCCACCCCTTCTGAAATAGTCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: GRFSFLSDDKGGPCQ*KATLLATPSEIVLL Trigger: CAACAAGACTATTTCAGAAGGGGTGGCCAACAGTGTGGCCTTTCACTGGCAAGGGCCACCTTTGTCATCACTTAAGAAAGAAAACCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657950.1 ENST00000659684.1 |
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| CDS TCA 90 bp | AAAGCTCTTTCTTGGCAGTGGGTTGGTGTGCGAGGTGTGATTACTTaGATTCAGGAAAGAGCCCGAGAGAAGTGTGCTTGCTCTACTGAG | + |
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Preference number: 5 (lower is better) Translates to: KALSWQWVGVRGVIT*IQERAREKCACSTE Trigger: CTCAGTAGAGCAAGCACACTTCTCTCGGGCTCTTTCCTGAATTCAAGTAATCACACCTCGCACACCAACCCACTGCCAAGAAAGAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 90 bp | AGGTGGGGCATGGGAGGTGTATCAATCATTATCTGGACAGGTTCCTaGCTAGTCATCCACTGCTGTCAGGACTTAAGGATGATGCTTATC | + |
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Preference number: 5 (lower is better) Translates to: RWGMGGVSIIIWTGS*LVIHCCQDLRMMLI Trigger: GATAAGCATCATCCTTAAGTCCTGACAGCAGTGGATGACTAGTCAGGAACCTGTCCAGATAATGATTGATACACCTCCCATGCCCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655255.1 ENST00000665644.1 |
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| CDS CCA 90 bp | CTAGAATCAGCCAAGAAAGTGCTAGAATCAGCCAAGACTTCTAATTaGCAAGCCGAAGCCCTCCCCATAAACAACCCCCTACTGGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LESAKKVLESAKTSN*QAEALPINNPLLVE Trigger: TTCAACCAGTAGGGGGTTGTTTATGGGGAGGGCTTCGGCTTGCCAATTAGAAGTCTTGGCTGATTCTAGCACTTTCTTGGCTGATTCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654749.1 |
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| CDS GCA 90 bp | CTGCCACTAAAGCCAGGCCATCAGATATGGCAAACCTCAGGGTGCTaGCAAATCTTACAGACCAAATTCTTTTCACCTGGGAATTTTACC | + |
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Preference number: 5 (lower is better) Translates to: LPLKPGHQIWQTSGC*QILQTKFFSPGNFT Trigger: GGTAAAATTCCCAGGTGAAAAGAATTTGGTCTGTAAGATTTGGCAGCACCCTGAGGTTTGCCATATCTGATGGCCTGGCTTTAGTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000508083.2 ENST00000651656.1 ENST00000654284.1 ENST00000654749.1 ENST00000657950.1 ENST00000659118.1 ENST00000662472.1 ENST00000667290.1 ENST00000667820.1 |
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| CDS GCA 90 bp | GTGCTGCCACTAAAGCCAGGCCATCAGATATGGCAAACCTCAGGGTaGTGCCAAATCTTACAGACCAAATTCTTTTCACCTGGGAATTTT | + |
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Preference number: 5 (lower is better) Translates to: VLPLKPGHQIWQTSG*CQILQTKFFSPGNF Trigger: AAAATTCCCAGGTGAAAAGAATTTGGTCTGTAAGATTTGGCAGCACCCTGAGGTTTGCCATATCTGATGGCCTGGCTTTAGTGGCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000508083.2 ENST00000651656.1 ENST00000654284.1 ENST00000654749.1 ENST00000657950.1 ENST00000659118.1 ENST00000662472.1 ENST00000667290.1 ENST00000667820.1 |
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| CDS CCA 90 bp | TCTCTACCTCCTGAGTCAAATAAAAGCTCTTTCTTGGCAGTGGGTTaGTGTGCGAGGTGTGATTACTTGAATTCAGGAAAGAGCCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: SLPPESNKSSFLAVG*CARCDYLNSGKSPR Trigger: TCTCGGGCTCTTTCCTGAATTCAAGTAATCACACCTCGCACACCAACCCACTGCCAAGAAAGAGCTTTTATTTGACTCAGGAGGTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 90 bp | TGTTTCTTCAATGCTTATTGTGCTGGATATTCCTGGACAGGTTCCTaGCTAGTCATCCACTGCTGTCAGGACTTAAGGATGATGCTTATC | + |
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Preference number: 5 (lower is better) Translates to: CFFNAYCAGYSWTGS*LVIHCCQDLRMMLI Trigger: GATAAGCATCATCCTTAAGTCCTGACAGCAGTGGATGACTAGTCAGGAACCTGTCCAGGAATATCCAGCACAATAAGCATTGAAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669685.1 |
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| CDS GCA 90 bp | CTGTTGGCCACCCCTTCTGAAATAGTCTTGTTGACTAAAGTTCTGTaGAGGATTTTATTGGCACCTATAAATAGACAAATTGGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLATPSEIVLLTKVL*RILLAPINRQIGSS Trigger: GGAGCTGCCAATTTGTCTATTTATAGGTGCCAATAAAATCCTGCACAGAACTTTAGTCAACAAGACTATTTCAGAAGGGGTGGCCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657950.1 ENST00000659684.1 |
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| CDS GCA 90 bp | TTGAAGAGTCAGTTCATAATGGCTTGGAATTCTTTAAGCTTGCGTTaGCATTTGTTTCTTCAATGCTTATTGTGCTGGATATTCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LKSQFIMAWNSLSLR*HLFLQCLLCWIFLD Trigger: GTCCAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAAAGAATTCCAAGCCATTATGAACTGACTCTTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669685.1 |
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| CDS TCA 90 bp | ACCCATTCATCAGACCCAATATTTCTCCTAAGTCAGGAGACACGATaGGAATTTTATCAAATCAATTCTGCAGTTAGTAACTTGACTACC | + |
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Preference number: 5 (lower is better) Translates to: THSSDPIFLLSQETR*EFYQINSAVSNLTT Trigger: GGTAGTCAAGTTACTAACTGCAGAATTGATTTGATAAAATTCTCATCGTGTCTCCTGACTTAGGAGAAATATTGGGTCTGATGAATGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000508083.2 ENST00000651656.1 ENST00000654284.1 ENST00000654749.1 ENST00000657950.1 ENST00000659118.1 ENST00000662472.1 ENST00000667290.1 ENST00000667820.1 |
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| CDS GCA 90 bp | TTGAAGAGTCAGTTCATAATGGCTTGGAATTCTTTAAGCTTGCGTTaGCATTTGTTTCTTCAATGCTTATTGTGCTGGATATTCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LKSQFIMAWNSLSLR*HLFLQCLLCWIFLA Trigger: AGCAAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAAAGAATTCCAAGCCATTATGAACTGACTCTTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000655255.1 ENST00000659118.1 |
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| CDS GCA 90 bp | TTGAAGAGTCAGTTCATAATGGCTTGGAATTCTTTAAGCTTGCGTTaGCATTTGTTTCTTCAATGCTTATTGTGCTGGATATTCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LKSQFIMAWNSLSLR*HLFLQCLLCWIFLE Trigger: TTCAAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAAAGAATTCCAAGCCATTATGAACTGACTCTTCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654284.1 |
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| CDS GCA 72 bp | TCACTCTGCTCAGATGTTATCAGAAGTGCCCTGGGCTaGACTGGTGAGATTCTCCCTGGCTCTGGGGTCATG | + |
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Preference number: 6 (lower is better) Translates to: SLCSDVIRSALG*TGEILPGSGVM Trigger: CATGACCCCAGAGCCAGGGAGAATCTCACCAGTGCAGCCCAGGGCACTTCTGATAACATCTGAGCAGAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000657940.1 ENST00000659118.1 ENST00000665644.1 ENST00000667290.1 ENST00000669685.1 |
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| CDS GCA 72 bp | GCGGTGGTACCCTTAGCATGTCTTCCTGCACTTACATaGAGCCAGGAAACTCCAGGCCATTCTCCATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: AVVPLACLPALT*SQETPGHSPWC Trigger: GCACCATGGAGAATGGCCTGGAGTTTCCTGGCTGCATGTAAGTGCAGGAAGACATGCTAAGGGTACCACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 72 bp | GGCAGAGGGCTTGACCCAGAGGAGCACTTCCATAAATaGGATGCCTGCCTCGTGCGTTTCTTCTCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: GRGLDPEEHFHK*DACLVRFFSFT Trigger: AGTGAAGGAGAAGAAACGCACGAGGCAGGCATCTCATTTATGGAAGTGCTCCTCTGGGTCAAGCCCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000657940.1 ENST00000659118.1 ENST00000665644.1 ENST00000667290.1 ENST00000669685.1 |
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| CDS GCA 72 bp | TCTACTGAGAGCGGTGGTACCCTTAGCATGTCTTCCTaGACTTACATGCAGCCAGGAAACTCCAGGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: STESGGTLSMSS*TYMQPGNSRPF Trigger: GAATGGCCTGGAGTTTCCTGGCTGCATGTAAGTGCAGGAAGACATGCTAAGGGTACCACCGCTCTCAGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 72 bp | TCTTGGCAGTGGGTTGGTGTGCGAGGTGTGATTACTTaGATTCAGGAAAGAGCCCGAGAGAAGTGTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SWQWVGVRGVIT*IQERAREKCAC Trigger: GCAAGCACACTTCTCTCGGGCTCTTTCCTGAATTCAAGTAATCACACCTCGCACACCAACCCACTGCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS CCA 72 bp | GCCAAGAAAGTGCTAGAATCAGCCAAGACTTCTAATTaGCAAGCCGAAGCCCTCCCCATAAACAACCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: AKKVLESAKTSN*QAEALPINNPL Trigger: TAGGGGGTTGTTTATGGGGAGGGCTTCGGCTTGCCAATTAGAAGTCTTGGCTGATTCTAGCACTTTCTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654749.1 |
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| CDS CAA 72 bp | TTCTTGGCAGTGGGTTGGTGTGCGAGGTGTGATTACTaGAATTCAGGAAAGAGCCCGAGAGAAGTGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FLAVGWCARCDY*NSGKSPREVCL Trigger: CAAGCACACTTCTCTCGGGCTCTTTCCTGAATTCAAGTAATCACACCTCGCACACCAACCCACTGCCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 72 bp | GAGACTTGCTCTTGGATGCTGTCAGGAAGTATCATCTaGCTGCGTTTGCTACCCTTGCTGAGCATCTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: ETCSWMLSGSII*LRLLPLLSIFC Trigger: GCAAAAGATGCTCAGCAAGGGTAGCAAACGCAGTCAGATGATACTTCCTGACAGCATCCAAGAGCAAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000508083.2 ENST00000657950.1 ENST00000659684.1 ENST00000662472.1 ENST00000671086.1 |
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| CDS TCA 72 bp | GCCCTCCCCATAAACAACCCCCTACTGGTTGAATACTaGGGTGACACACTCAGTTGCATCAGCTCTAAGATT | + |
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Preference number: 6 (lower is better) Translates to: ALPINNPLLVEY*GDTLSCISSKI Trigger: AATCTTAGAGCTGATGCAACTGAGTGTGTCACCTCAGTATTCAACCAGTAGGGGGTTGTTTATGGGGAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654749.1 |
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| CDS TCA 72 bp | TCTTTCTTAAGTGATGACAAAGGTGGCCCTTGCCAGTaGAAGGCCACACTGTTGGCCACCCCTTCTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: SFLSDDKGGPCQ*KATLLATPSEI Trigger: TATTTCAGAAGGGGTGGCCAACAGTGTGGCCTTTCACTGGCAAGGGCCACCTTTGTCATCACTTAAGAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657950.1 ENST00000659684.1 |
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| CDS GCA 72 bp | AAGCCAGGCCATCAGATATGGCAAACCTCAGGGTGCTaGCAAATCTTACAGACCAAATTCTTTTCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KPGHQIWQTSGC*QILQTKFFSPG Trigger: CCCAGGTGAAAAGAATTTGGTCTGTAAGATTTGGCAGCACCCTGAGGTTTGCCATATCTGATGGCCTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000508083.2 ENST00000651656.1 ENST00000654284.1 ENST00000654749.1 ENST00000657950.1 ENST00000659118.1 ENST00000662472.1 ENST00000667290.1 ENST00000667820.1 |
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| CDS TCA 72 bp | GAGACTTGCTCTTGGATGCTGTCAGGAAGTATCATCTaGCTGCGTTTGCTACCCTTGAAGTGTCTTCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ETCSWMLSGSII*LRLLPLKCLRL Trigger: CAAACGAAGACACTTCAAGGGTAGCAAACGCAGTCAGATGATACTTCCTGACAGCATCCAAGAGCAAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667820.1 |
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| CDS TCA 72 bp | ATGGGAGGTGTATCAATCATTATCTGGACAGGTTCCTaGCTAGTCATCCACTGCTGTCAGGACTTAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: MGGVSIIIWTGS*LVIHCCQDLRM Trigger: CATCCTTAAGTCCTGACAGCAGTGGATGACTAGTCAGGAACCTGTCCAGATAATGATTGATACACCTCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655255.1 ENST00000665644.1 |
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| CDS TCA 72 bp | AATGCTTATTGTGCTGGATATTCCTGGACAGGTTCCTaGCTAGTCATCCACTGCTGTCAGGACTTAAGGATG | + |
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Preference number: 6 (lower is better) Translates to: NAYCAGYSWTGS*LVIHCCQDLRM Trigger: CATCCTTAAGTCCTGACAGCAGTGGATGACTAGTCAGGAACCTGTCCAGGAATATCCAGCACAATAAGCATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669685.1 |
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| CDS GCA 72 bp | CTAAAGCCAGGCCATCAGATATGGCAAACCTCAGGGTaGTGCCAAATCTTACAGACCAAATTCTTTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: LKPGHQIWQTSG*CQILQTKFFSP Trigger: AGGTGAAAAGAATTTGGTCTGTAAGATTTGGCAGCACCCTGAGGTTTGCCATATCTGATGGCCTGGCTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000508083.2 ENST00000651656.1 ENST00000654284.1 ENST00000654749.1 ENST00000657950.1 ENST00000659118.1 ENST00000662472.1 ENST00000667290.1 ENST00000667820.1 |
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| CDS CAA 72 bp | CTTTCTCTACCTCCTGAGTCAAATAAAAGCTCTTTCTaGGCAGTGGGTTGGTGTGCGAGGTGTGATTACTTG | + |
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Preference number: 6 (lower is better) Translates to: LSLPPESNKSSF*AVGWCARCDYL Trigger: CAAGTAATCACACCTCGCACACCAACCCACTGCCAAGAAAGAGCTTTTATTTGACTCAGGAGGTAGAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 72 bp | ATCTCAAATGATAGGCTGAACTCACTCTGCCTCTTTTaGGTGACCACTGTGCTCAACAGAAGCACTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: ISNDRLNSLCLF*VTTVLNRSTDV Trigger: AACATCAGTGCTTCTGTTGAGCACAGTGGTCACTCAAAAGAGGCAGAGTGAGTTCAGCCTATCATTTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000651656.1 ENST00000657950.1 ENST00000662472.1 |
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| CDS TCA 72 bp | CATAAAAGGAATCCATCAGCCCCTTGGAGCCATGTGTaGTATGCAAGGTCCCAAATGAGAAATTCTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HKRNPSAPWSHV*YARSQMRNSLE Trigger: TTCCAGAGAATTTCTCATTTGGGACCTTGCATATCACACATGGCTCCAAGGGGCTGATGGATTCCTTTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657940.1 ENST00000669685.1 |
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| CDS CAA 90 bp | TCAGTGAAACTTTCTCTACCTCCTGAGTCAAATAAAAGCTCTTTCTaGGCAGTGGGTTGGTGTGCGAGGTGTGATTACTTGAATTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SVKLSLPPESNKSSF*AVGWCARCDYLNSG Trigger: TCCTGAATTCAAGTAATCACACCTCGCACACCAACCCACTGCCAAGAAAGAGCTTTTATTTGACTCAGGAGGTAGAGAAAGTTTCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657940.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS TCA 72 bp | GTTTCTTCAATGCTTATTGTGCTGGATATTCCTTGCTaGGCATCTTTTGCACTTTCTCCTTTTGAGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: VSSMLIVLDIPC*ASFALSPFEWA Trigger: TGCCCACTCAAAAGGAGAAAGTGCAAAAGATGCTCAGCAAGGAATATCCAGCACAATAAGCATTGAAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000655255.1 ENST00000659118.1 |
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| CDS CAA 72 bp | TTAAGCTTGCGTTGCCATTTGTTTCTTCAATGCTTATaGTGCTGGATATTCCTGGACAGGTTCCTGACTAGT | + |
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Preference number: 6 (lower is better) Translates to: LSLRCHLFLQCL*CWIFLDRFLTS Trigger: ACTAGTCAGGAACCTGTCCAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669685.1 |
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| CDS CAA 72 bp | TTAAGCTTGCGTTGCCATTTGTTTCTTCAATGCTTATaGTGCTGGATATTCCTTGCTGAGCATCTTTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LSLRCHLFLQCL*CWIFLAEHLLH Trigger: GTGCAAAAGATGCTCAGCAAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000655255.1 ENST00000659118.1 |
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| CDS CAA 72 bp | TTAAGCTTGCGTTGCCATTTGTTTCTTCAATGCTTATaGTGCTGGATATTCCTTGAAGTGTCTTCGTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LSLRCHLFLQCL*CWIFLEVSSFV Trigger: GACAAACGAAGACACTTCAAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654284.1 |
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| CDS CAA 72 bp | ATAGTCTTGTTGACTAAAGTTCTGTGCAGGATTTTATaGGCACCTATAAATAGACAAATTGGCAGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: IVLLTKVLCRIL*APINRQIGSSL Trigger: CAAGGAGCTGCCAATTTGTCTATTTATAGGTGCCAATAAAATCCTGCACAGAACTTTAGTCAACAAGACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657950.1 ENST00000659684.1 |
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| CDS CAA 72 bp | ATAATGGCTTGGAATTCTTTAAGCTTGCGTTGCCATTaGTTTCTTCAATGCTTATTGTGCTGGATATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: IMAWNSLSLRCH*FLQCLLCWIFL Trigger: CAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAAAGAATTCCAAGCCATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669685.1 |
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| CDS CAA 90 bp | AAGTTAATCCAGAAACTCCCTGGTTATGTGAAAATAAGCACTTATTaGAAGAGTCAGTTCATAATGGCTTGGAATTCTTTAAGCTTGCGT | + |
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Preference number: 6 (lower is better) Translates to: KLIQKLPGYVKISTY*KSQFIMAWNSLSLR Trigger: ACGCAAGCTTAAAGAATTCCAAGCCATTATGAACTGACTCTTCAAATAAGTGCTTATTTTCACATAACCAGGGAGTTTCTGGATTAACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000659118.1 ENST00000669685.1 |
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| CDS CAA 90 bp | CCTTCTGAAATAGTCTTGTTGACTAAAGTTCTGTGCAGGATTTTATaGGCACCTATAAATAGACAAATTGGCAGCTCCTTGTTTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PSEIVLLTKVLCRIL*APINRQIGSSLFSF Trigger: AAAAGAAAACAAGGAGCTGCCAATTTGTCTATTTATAGGTGCCAATAAAATCCTGCACAGAACTTTAGTCAACAAGACTATTTCAGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657950.1 ENST00000659684.1 |
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| CDS TCA 72 bp | TCAGACCCAATATTTCTCCTAAGTCAGGAGACACGATaGGAATTTTATCAAATCAATTCTGCAGTTAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SDPIFLLSQETR*EFYQINSAVSN Trigger: GTTACTAACTGCAGAATTGATTTGATAAAATTCTCATCGTGTCTCCTGACTTAGGAGAAATATTGGGTCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000508083.2 ENST00000651656.1 ENST00000654284.1 ENST00000654749.1 ENST00000657950.1 ENST00000659118.1 ENST00000662472.1 ENST00000667290.1 ENST00000667820.1 |
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| CDS CAA 72 bp | ATAATGGCTTGGAATTCTTTAAGCTTGCGTTGCCATTaGTTTCTTCAATGCTTATTGTGCTGGATATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IMAWNSLSLRCH*FLQCLLCWIFL Trigger: AAGGAATATCCAGCACAATAAGCATTGAAGAAACAAATGGCAACGCAAGCTTAAAGAATTCCAAGCCATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000659118.1 |
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| CDS CAA 72 bp | CAGAAACTCCCTGGTTATGTGAAAATAAGCACTTATTaGAAGAGTCAGTTCATAATGGCTTGGAATTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: QKLPGYVKISTY*KSQFIMAWNSL Trigger: TAAAGAATTCCAAGCCATTATGAACTGACTCTTCAAATAAGTGCTTATTTTCACATAACCAGGGAGTTTCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000512458.2 ENST00000651656.1 ENST00000654284.1 ENST00000655255.1 ENST00000659118.1 ENST00000669685.1 |
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