Pregenerated sensors for LINC01331 (Homo sapiens)
Ensembl gene IDs: ENSG00000248673Ensembl transcript IDs: ENST00000507781.1, ENST00000657957.1, ENST00000663633.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCACAATAGCTGGTCGAGCTTCCCCCTCCACCCTGAGTTCCAATaGGAGGCCCCCATTCCGTTCCCAGTGTGGCCAGGGCCATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GHNSWSSFPLHPEFQ*EAPIPFPVWPGPSS Trigger: ACTGGATGGCCCTGGCCACACTGGGAACGGAATGGGGGCCTCCCATTGGAACTCAGGGTGGAGGGGGAAGCTCGACCAGCTATTGTGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | ATTCAGTTTCTTGCAGCTGTAGAATGCAGGTCCCTGCTTTCTTGCTaGCTGTCAGCCAGGGCTGCTCTCGGCATCTACAGGCCCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: IQFLAAVECRSLLSC*LSARAALGIYRPPL Trigger: CAGAGGGGGCCTGTAGATGCCGAGAGCAGCCCTGGCTGACAGCCAGCAAGAAAGCAGGGACCTGCATTCTACAGCTGCAAGAAACTGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 90 bp | ACAGATCTGCATTTCTTTGTCAATGGAAGTGGGGGCCACAATAGCTaGTCGAGCTTCCCCCTCCACCCTGAGTTCCAATGGGAGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: TDLHFFVNGSGGHNS*SSFPLHPEFQWEAP Trigger: GGGGGCCTCCCATTGGAACTCAGGGTGGAGGGGGAAGCTCGACCAGCTATTGTGGCCCCCACTTCCATTGACAAAGAAATGCAGATCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS GCA 90 bp | GAATGGCCTTCTCTCCTTGATGCTGGGCTAGCCCACACTAGACCATaGTCCCCAAGCTTCCAGTTGGTCAGCATAGCCCTCCTTATGGAG | + |
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Preference number: 5 (lower is better) Translates to: EWPSLLDAGLAHTRP*SPSFQLVSIALLME Trigger: CTCCATAAGGAGGGCTATGCTGACCAACTGGAAGCTTGGGGAGCATGGTCTAGTGTGGGCTAGCCCAGCATCAAGGAGAGAAGGCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS GCA 90 bp | CCTGGGAAAGTCGCTTCAATGTCAACTTCCTGGCATGCCTCCCACTaGTCCTCTGGCTTTGCTTGGTGGCCTCTGAGTAAACTAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: PGKVASMSTSWHASH*SSGFAWWPLSKLDR Trigger: CCTGTCTAGTTTACTCAGAGGCCACCAAGCAAAGCCAGAGGAGCAGTGGGAGGCATGCCAGGAAGTTGACATTGAAGCGACTTTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS GCA 90 bp | GTCAGCATAGCCCTCCTTATGGAGAGGATGGGCTCACCTGATTGTTaGCTCTGGAGCCTGGGAAAGTCGCTTCAATGTCAACTTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: VSIALLMERMGSPDC*LWSLGKSLQCQLPG Trigger: GCCAGGAAGTTGACATTGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCTCCATAAGGAGGGCTATGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | TCCTTATGGAGAGGATGGGCTCACCTGATTGTTGCCTCTGGAGCCTaGGAAAGTCGCTTCAATGTCAACTTCCTGGCATGCCTCCCACTG | + |
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Preference number: 5 (lower is better) Translates to: SLWRGWAHLIVASGA*ESRFNVNFLACLPL Trigger: CAGTGGGAGGCATGCCAGGAAGTTGACATTGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCTCCATAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS TCA 90 bp | GGCCCCCTCTGTTCCTTGCATGTGGCCCTCTCCCAGGTCCACTCATaGTATGTCAGCCTACTTCTTCAAGGCCAGCAAAAGAATCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GPLCSLHVALSQVHS*YVSLLLQGQQKNLL Trigger: CAAGAGATTCTTTTGCTGGCCTTGAAGAAGTAGGCTGACATATCATGAGTGGACCTGGGAGAGGGCCACATGCAAGGAACAGAGGGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 90 bp | CCAGTTGGTCAGCATAGCCCTCCTTATGGAGAGGATGGGCTCACCTaGTTGTTGCCTCTGGAGCCTGGGAAAGTCGCTTCAATGTCAACT | + |
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Preference number: 5 (lower is better) Translates to: PVGQHSPPYGEDGLT*LLPLEPGKVASMST Trigger: AGTTGACATTGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCTCCATAAGGAGGGCTATGCTGACCAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | ATAGCCCTCCTTATGGAGAGGATGGGCTCACCTGATTGTTGCCTCTaGAGCCTGGGAAAGTCGCTTCAATGTCAACTTCCTGGCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: IALLMERMGSPDCCL*SLGKSLQCQLPGMP Trigger: AGGCATGCCAGGAAGTTGACATTGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCTCCATAAGGAGGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | GGTCCTCTGCTCGGAGTCTCACAAGGGTGCTATCAAGATGTTGGCTaGCTGCATTTCTTTCTGGGTCTTGAGATCCTCTTCAAAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GPLLGVSQGCYQDVG*LHFFLGLEILFKAQ Trigger: CTGAGCTTTGAAGAGGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGATAGCACCCTTGTGAGACTCCGAGCAGAGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 90 bp | TCAACTTCCTGGCATGCCTCCCACTGCTCCTCTGGCTTTGCTTGGTaGCCTCTGAGTAAACTAGACAGGCTACATCTGAACAATTCCATC | + |
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Preference number: 5 (lower is better) Translates to: STSWHASHCSSGFAW*PLSKLDRLHLNNSI Trigger: GATGGAATTGTTCAGATGTAGCCTGTCTAGTTTACTCAGAGGCCACCAAGCAAAGCCAGAGGAGCAGTGGGAGGCATGCCAGGAAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | ATGTCAACTTCCTGGCATGCCTCCCACTGCTCCTCTGGCTTTGCTTaGTGGCCTCTGAGTAAACTAGACAGGCTACATCTGAACAATTCC | + |
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Preference number: 5 (lower is better) Translates to: MSTSWHASHCSSGFA*WPLSKLDRLHLNNS Trigger: GGAATTGTTCAGATGTAGCCTGTCTAGTTTACTCAGAGGCCACCAAGCAAAGCCAGAGGAGCAGTGGGAGGCATGCCAGGAAGTTGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | GCACAATGGAGTCAAGGTGCACATATTTCACATGCTACCCTAGAATaGCCTTCTCTCCTTGATGCTGGGCTAGCCCACACTAGACCATGC | + |
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Preference number: 5 (lower is better) Translates to: AQWSQGAHISHATLE*PSLLDAGLAHTRPC Trigger: GCATGGTCTAGTGTGGGCTAGCCCAGCATCAAGGAGAGAAGGCCATTCTAGGGTAGCATGTGAAATATGTGCACCTTGACTCCATTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS TCA 90 bp | GGTAGAAGGGCAAACATAGAAAACACCACCCTAGCCAGGTTGCCCTaGATGGCCCCAGTGTCTAGCATAGTGCTTTATGCACACAATAGC | + |
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Preference number: 5 (lower is better) Translates to: GRRANIENTTLARLP*MAPVSSIVLYAHNS Trigger: GCTATTGTGTGCATAAAGCACTATGCTAGACACTGGGGCCATTCAGGGCAACCTGGCTAGGGTGGTGTTTTCTATGTTTGCCCTTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS TCA 90 bp | AGAGAGGCACTCTGCTCTCCTCACAGAACTGGACAGTTTTCTGTTTaGTATAGGCACCAGGTCTTCAAATGGGGGAGGCAAAGTAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: REALCSPHRTGQFSV*YRHQVFKWGRQSRG Trigger: ACCTCTACTTTGCCTCCCCCATTTGAAGACCTGGTGCCTATATCAAACAGAAAACTGTCCAGTTCTGTGAGGAGAGCAGAGTGCCTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 90 bp | AGGGTGCTATCAAGATGTTGGCTGGCTGCATTTCTTTCTGGGTCTTaGGATCCTCTTCAAAGCTCAGGGGGTTGCTGGCAGAATTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RVLSRCWLAAFLSGS*DPLQSSGGCWQNSV Trigger: AACTGAATTCTGCCAGCAACCCCCTGAGCTTTGAAGAGGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGATAGCACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 90 bp | AGTTACTCTCAAGAGTGGCTGGGTGTTGACTGGGAAGGGGCCAAGTaGGCCTTCTGGAGTTTGTGGGAATGTTTATATCTTGATCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: SYSQEWLGVDWEGAK*AFWSLWECLYLDLG Trigger: ACCCAGATCAAGATATAAACATTCCCACAAACTCCAGAAGGCTCACTTGGCCCCTTCCCAGTCAACACCCAGCCACTCTTGAGAGTAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | TCTGCAGTGATAGATGTTAGGATAGAAGTTACTCTCAAGAGTGGCTaGGTGTTGACTGGGAAGGGGCCAAGTGAGCCTTCTGGAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: SAVIDVRIEVTLKSG*VLTGKGPSEPSGVC Trigger: ACAAACTCCAGAAGGCTCACTTGGCCCCTTCCCAGTCAACACCCAGCCACTCTTGAGAGTAACTTCTATCCTAACATCTATCACTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS TCA 90 bp | GTTTCAACCAAGCCAGTTTCTGGCAGGCTTCTGCTTCTGTCTTCTTaGGATGGCACCATGCCTTGGTTTCTAGTTCTTTCGAAGCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: VSTKPVSGRLLLLSS*DGTMPWFLVLSKQV Trigger: CACTTGCTTCGAAAGAACTAGAAACCAAGGCATGGTGCCATCTCAAGAAGACAGAAGCAGAAGCCTGCCAGAAACTGGCTTGGTTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 90 bp | GATATAGGCACCAGGTCTTCAAATGGGGGAGGCAAAGTAGAGGTATaGCATATGAGGAAAGCTACACCGGTTATTCTCGGTTCTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: DIGTRSSNGGGKVEV*HMRKATPVILGSLH Trigger: ATGGAGAGAACCGAGAATAACCGGTGTAGCTTTCCTCATATGTCATACCTCTACTTTGCCTCCCCCATTTGAAGACCTGGTGCCTATATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS GCA 90 bp | AATATCTGGAAGATCTCAAGAAGTGAACCTTGGCTGACCCACTTGTaGACATCTTTAAAATCCCTCCCTTCCGCACTTTCTGTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: NIWKISRSEPWLTHL*TSLKSLPSALSVEP Trigger: TGGCTCCACAGAAAGTGCGGAAGGGAGGGATTTTAAAGATGTGCACAAGTGGGTCAGCCAAGGTTCACTTCTTGAGATCTTCCAGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | AACCAAGCCAGTTTCTGGCAGGCTTCTGCTTCTGTCTTCTTGAGATaGCACCATGCCTTGGTTTCTAGTTCTTTCGAAGCAAGTGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: NQASFWQASASVFLR*HHALVSSSFEASAK Trigger: TTTTGCACTTGCTTCGAAAGAACTAGAAACCAAGGCATGGTGCCATCTCAAGAAGACAGAAGCAGAAGCCTGCCAGAAACTGGCTTGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 90 bp | ATTCCTCCAGCAATGAATGTAGAGCCAAGCTGTGAACCCAAAGACTaGAGCCCTACACACCTCCCCAGCTTTTACTGTAGAAATCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: IPPAMNVEPSCEPKD*SPTHLPSFYCRNLY Trigger: ATAAAGATTTCTACAGTAAAAGCTGGGGAGGTGTGTAGGGCTCCAGTCTTTGGGTTCACAGCTTGGCTCTACATTCATTGCTGGAGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507781.1 ENST00000663633.1 |
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| CDS TCA 90 bp | TATGTTAGTGAGAAGTTAGGGAAAATGGCTAGCTTCCTGATGCTTTaGACCAGAGTTTCAACCAAGCCAGTTTCTGGCAGGCTTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: YVSEKLGKMASFLML*TRVSTKPVSGRLLL Trigger: AAGCAGAAGCCTGCCAGAAACTGGCTTGGTTGAAACTCTGGTTCAAAGCATCAGGAAGCTAGCCATTTTCCCTAACTTCTCACTAACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 90 bp | CATGAACTCCTAATAAATATCTGGAAGATCTCAAGAAGTGAACCTTaGCTGACCCACTTGTGCACATCTTTAAAATCCCTCCCTTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: HELLINIWKISRSEP*LTHLCTSLKSLPSA Trigger: TGCGGAAGGGAGGGATTTTAAAGATGTGCACAAGTGGGTCAGCCAAGGTTCACTTCTTGAGATCTTCCAGATATTTATTAGGAGTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | TCTACAGAAATGAACATCCCCTCCCATGAACTCCTAATAAATATCTaGAAGATCTCAAGAAGTGAACCTTGGCTGACCCACTTGTGCACA | + |
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Preference number: 5 (lower is better) Translates to: STEMNIPSHELLINI*KISRSEPWLTHLCT Trigger: TGTGCACAAGTGGGTCAGCCAAGGTTCACTTCTTGAGATCTTCCAGATATTTATTAGGAGTTCATGGGAGGGGATGTTCATTTCTGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 90 bp | GCTTCCTCCTTAGAGCGCTGCCTTCACTTTCAATCTTGTTCACCTTaGGGTTTTATTTCTCACAATGGTGTTACATATTCTAGTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ASSLERCLHFQSCSP*GFISHNGVTYSSSS Trigger: AGAAGAACTAGAATATGTAACACCATTGTGAGAAATAAAACCCCAAGGTGAACAAGATTGAAAGTGAAGGCAGCGCTCTAAGGAGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507781.1 |
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| CDS CCA 90 bp | GCTTCCTCCTTAGAGCGCTGCCTTCACTTTCAATCTTGTTCACCTTaGGGTTTTATTTCTCACAATGGTGTTACATATTCTGAATATGAA | + |
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Preference number: 5 (lower is better) Translates to: ASSLERCLHFQSCSP*GFISHNGVTYSEYE Trigger: TTCATATTCAGAATATGTAACACCATTGTGAGAAATAAAACCCCAAGGTGAACAAGATTGAAAGTGAAGGCAGCGCTCTAAGGAGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS GCA 90 bp | TGTTTATATCTTGATCTGGGTGGTGGTTGTATGGGTATATACATTTaGAAAAATCCACTGAATCATGTGCTTGAGATTAGTGCACTCACT | + |
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Preference number: 5 (lower is better) Translates to: CLYLDLGGGCMGIYI*KNPLNHVLEISALT Trigger: AGTGAGTGCACTAATCTCAAGCACATGATTCAGTGGATTTTTGCAAATGTATATACCCATACAACCACCACCCAGATCAAGATATAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS GCA 72 bp | CAGGTCCCTGCTTTCTTGCTGGCTGTCAGCCAGGGCTaGTCTCGGCATCTACAGGCCCCCTCTGTTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: QVPAFLLAVSQG*SRHLQAPSVPC Trigger: GCAAGGAACAGAGGGGGCCTGTAGATGCCGAGAGCAGCCCTGGCTGACAGCCAGCAAGAAAGCAGGGACCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 72 bp | CTTGCAGCTGTAGAATGCAGGTCCCTGCTTTCTTGCTaGCTGTCAGCCAGGGCTGCTCTCGGCATCTACAGG | + |
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Preference number: 6 (lower is better) Translates to: LAAVECRSLLSC*LSARAALGIYR Trigger: CCTGTAGATGCCGAGAGCAGCCCTGGCTGACAGCCAGCAAGAAAGCAGGGACCTGCATTCTACAGCTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 90 bp | CAGAATTCAGTTTCTTGCAGCTGTAGAATGCAGGTCCCTGCTTTCTaGCTGGCTGTCAGCCAGGGCTGCTCTCGGCATCTACAGGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: QNSVSCSCRMQVPAF*LAVSQGCSRHLQAP Trigger: GGGGGCCTGTAGATGCCGAGAGCAGCCCTGGCTGACAGCCAGCAAGAAAGCAGGGACCTGCATTCTACAGCTGCAAGAAACTGAATTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 72 bp | CTGGAGCCTGGGAAAGTCGCTTCAATGTCAACTTCCTaGCATGCCTCCCACTGCTCCTCTGGCTTTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LEPGKVASMSTS*HASHCSSGFAW Trigger: CCAAGCAAAGCCAGAGGAGCAGTGGGAGGCATGCCAGGAAGTTGACATTGAAGCGACTTTCCCAGGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS TCA 72 bp | CAGCATAGCCCTCCTTATGGAGAGGATGGGCTCACCTaGTTGTTGCCTCTGGAGCCTGGGAAAGTCGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QHSPPYGEDGLT*LLPLEPGKVAS Trigger: TGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCTCCATAAGGAGGGCTATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS GCA 72 bp | TTTCTTGCAGCTGTAGAATGCAGGTCCCTGCTTTCTTaGTGGCTGTCAGCCAGGGCTGCTCTCGGCATCTAC | + |
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Preference number: 6 (lower is better) Translates to: FLAAVECRSLLS*WLSARAALGIY Trigger: GTAGATGCCGAGAGCAGCCCTGGCTGACAGCCAGCAAGAAAGCAGGGACCTGCATTCTACAGCTGCAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS GCA 72 bp | GTCGCTTCAATGTCAACTTCCTGGCATGCCTCCCACTaGTCCTCTGGCTTTGCTTGGTGGCCTCTGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: VASMSTSWHASH*SSGFAWWPLSK Trigger: TTTACTCAGAGGCCACCAAGCAAAGCCAGAGGAGCAGTGGGAGGCATGCCAGGAAGTTGACATTGAAGCGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS GCA 72 bp | GCCCTCCTTATGGAGAGGATGGGCTCACCTGATTGTTaGCTCTGGAGCCTGGGAAAGTCGCTTCAATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: ALLMERMGSPDC*LWSLGKSLQCQ Trigger: TTGACATTGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCTCCATAAGGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 72 bp | AGAGGATGGGCTCACCTGATTGTTGCCTCTGGAGCCTaGGAAAGTCGCTTCAATGTCAACTTCCTGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: RGWAHLIVASGA*ESRFNVNFLAC Trigger: GCATGCCAGGAAGTTGACATTGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS GCA 72 bp | GTTGCTGGCAGAATTCAGTTTCTTGCAGCTGTAGAATaGAGGTCCCTGCTTTCTTGCTGGCTGTCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VAGRIQFLAAVE*RSLLSCWLSAR Trigger: CCTGGCTGACAGCCAGCAAGAAAGCAGGGACCTGCATTCTACAGCTGCAAGAAACTGAATTCTGCCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 72 bp | TGTTCCTTGCATGTGGCCCTCTCCCAGGTCCACTCATaGTATGTCAGCCTACTTCTTCAAGGCCAGCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: CSLHVALSQVHS*YVSLLLQGQQK Trigger: CTTTTGCTGGCCTTGAAGAAGTAGGCTGACATATCATGAGTGGACCTGGGAGAGGGCCACATGCAAGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 72 bp | TCAAGATGTTGGCTGGCTGCATTTCTTTCTGGGTCTTaGGATCCTCTTCAAAGCTCAGGGGGTTGCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SRCWLAAFLSGS*DPLQSSGGCWQ Trigger: CTGCCAGCAACCCCCTGAGCTTTGAAGAGGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS GCA 72 bp | CCAGAGTTTCAACCAAGCCAGTTTCTGGCAGGCTTCTaGTTCTGTCTTCTTGAGATGGCACCATGCCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: PEFQPSQFLAGF*FCLLEMAPCLG Trigger: ACCAAGGCATGGTGCCATCTCAAGAAGACAGAAGCAGAAGCCTGCCAGAAACTGGCTTGGTTGAAACTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS GCA 72 bp | CAAAGCTCAGGGGGTTGCTGGCAGAATTCAGTTTCTTaGAGCTGTAGAATGCAGGTCCCTGCTTTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: QSSGGCWQNSVS*SCRMQVPAFLL Trigger: CAGCAAGAAAGCAGGGACCTGCATTCTACAGCTGCAAGAAACTGAATTCTGCCAGCAACCCCCTGAGCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 72 bp | GGATTATTCAAGGGTGTATCCACCCCACTCAGGCCTTaGACCATTGTCAGCACACCACTACTTCCTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: GLFKGVSTPLRP*TIVSTPLLPDH Trigger: GTGATCAGGAAGTAGTGGTGTGCTGACAATGGTCCAAGGCCTGAGTGGGGTGGATACACCCTTGAATAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 72 bp | CTTATGGAGAGGATGGGCTCACCTGATTGTTGCCTCTaGAGCCTGGGAAAGTCGCTTCAATGTCAACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LMERMGSPDCCL*SLGKSLQCQLP Trigger: AGGAAGTTGACATTGAAGCGACTTTCCCAGGCTCCAGAGGCAACAATCAGGTGAGCCCATCCTCTCCATAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CAA 72 bp | CTCTGCTCGGAGTCTCACAAGGGTGCTATCAAGATGTaGGCTGGCTGCATTTCTTTCTGGGTCTTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: LCSESHKGAIKM*AGCISFWVLRS Trigger: GGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGATAGCACCCTTGTGAGACTCCGAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 72 bp | CAAGAGTGGCTGGGTGTTGACTGGGAAGGGGCCAAGTaGGCCTTCTGGAGTTTGTGGGAATGTTTATATCTT | + |
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Preference number: 6 (lower is better) Translates to: QEWLGVDWEGAK*AFWSLWECLYL Trigger: AAGATATAAACATTCCCACAAACTCCAGAAGGCTCACTTGGCCCCTTCCCAGTCAACACCCAGCCACTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 72 bp | GGTGCTATCAAGATGTTGGCTGGCTGCATTTCTTTCTaGGTCTTGAGATCCTCTTCAAAGCTCAGGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GAIKMLAGCISF*VLRSSSKLRGL Trigger: CAACCCCCTGAGCTTTGAAGAGGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGATAGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 72 bp | CTCGGAGTCTCACAAGGGTGCTATCAAGATGTTGGCTaGCTGCATTTCTTTCTGGGTCTTGAGATCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LGVSQGCYQDVG*LHFFLGLEILF Trigger: GAAGAGGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGATAGCACCCTTGTGAGACTCCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 72 bp | AGTCAAGGTGCACATATTTCACATGCTACCCTAGAATaGCCTTCTCTCCTTGATGCTGGGCTAGCCCACACT | + |
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Preference number: 6 (lower is better) Translates to: SQGAHISHATLE*PSLLDAGLAHT Trigger: AGTGTGGGCTAGCCCAGCATCAAGGAGAGAAGGCCATTCTAGGGTAGCATGTGAAATATGTGCACCTTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CAA 72 bp | AGTGTGGCCAGGGCCATCCAGTCATGTGTGGGAAACTaGAGTGTTTCCAAGTCAGGGAGTTCTTACTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SVARAIQSCVGN*SVSKSGSSYSS Trigger: ACTTGAGTAAGAACTCCCTGACTTGGAAACACTCAAGTTTCCCACACATGACTGGATGGCCCTGGCCACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507781.1 ENST00000663633.1 |
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| CDS CAA 72 bp | ATCAAGATGTTGGCTGGCTGCATTTCTTTCTGGGTCTaGAGATCCTCTTCAAAGCTCAGGGGGTTGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: IKMLAGCISFWV*RSSSKLRGLLA Trigger: TGCCAGCAACCCCCTGAGCTTTGAAGAGGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 90 bp | TCCGTTCCCAGTGTGGCCAGGGCCATCCAGTCATGTGTGGGAAACTaGAGTGTTTCCAAGTCAGGGAGTTCTTACTCAAGTTTGGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SVPSVARAIQSCVGN*SVSKSGSSYSSLVK Trigger: TTTAACCAAACTTGAGTAAGAACTCCCTGACTTGGAAACACTCAAGTTTCCCACACATGACTGGATGGCCCTGGCCACACTGGGAACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507781.1 ENST00000663633.1 |
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| CDS TCA 72 bp | AAGCCAGTTTCTGGCAGGCTTCTGCTTCTGTCTTCTTaGGATGGCACCATGCCTTGGTTTCTAGTTCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: KPVSGRLLLLSS*DGTMPWFLVLS Trigger: CGAAAGAACTAGAAACCAAGGCATGGTGCCATCTCAAGAAGACAGAAGCAGAAGCCTGCCAGAAACTGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 72 bp | CTCTGCTCTCCTCACAGAACTGGACAGTTTTCTGTTTaGTATAGGCACCAGGTCTTCAAATGGGGGAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LCSPHRTGQFSV*YRHQVFKWGRQ Trigger: TTGCCTCCCCCATTTGAAGACCTGGTGCCTATATCAAACAGAAAACTGTCCAGTTCTGTGAGGAGAGCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 72 bp | CCCTTCCGCACTTTCTGTGGAGCCAGGCGAAGGGTCTaGAAACCCTTGAACACTTTTGTGAACTGTAAATTC | + |
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Preference number: 6 (lower is better) Translates to: PFRTFCGARRRV*KPLNTFVNCKF Trigger: GAATTTACAGTTCACAAAAGTGTTCAAGGGTTTTCAGACCCTTCGCCTGGCTCCACAGAAAGTGCGGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 72 bp | ATAGATGTTAGGATAGAAGTTACTCTCAAGAGTGGCTaGGTGTTGACTGGGAAGGGGCCAAGTGAGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IDVRIEVTLKSG*VLTGKGPSEPS Trigger: AGAAGGCTCACTTGGCCCCTTCCCAGTCAACACCCAGCCACTCTTGAGAGTAACTTCTATCCTAACATCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CAA 90 bp | AGTTTCAACCAAGCCAGTTTCTGGCAGGCTTCTGCTTCTGTCTTCTaGAGATGGCACCATGCCTTGGTTTCTAGTTCTTTCGAAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: SFNQASFWQASASVF*RWHHALVSSSFEAS Trigger: ACTTGCTTCGAAAGAACTAGAAACCAAGGCATGGTGCCATCTCAAGAAGACAGAAGCAGAAGCCTGCCAGAAACTGGCTTGGTTGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 72 bp | ACCAGGTCTTCAAATGGGGGAGGCAAAGTAGAGGTATaGCATATGAGGAAAGCTACACCGGTTATTCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: TRSSNGGGKVEV*HMRKATPVILG Trigger: ACCGAGAATAACCGGTGTAGCTTTCCTCATATGTCATACCTCTACTTTGCCTCCCCCATTTGAAGACCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS GCA 72 bp | GAGTCTCACAAGGGTGCTATCAAGATGTTGGCTGGCTaGATTTCTTTCTGGGTCTTGAGATCCTCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ESHKGAIKMLAG*ISFWVLRSSSK Trigger: CTTTGAAGAGGATCTCAAGACCCAGAAAGAAATGCAGCCAGCCAACATCTTGATAGCACCCTTGTGAGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CCA 72 bp | ACAGGAGTGACATCCATCACCTTCACGGTACTCAACTaGCTAGAAGCCAGTCACAATTTCCACTCATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TGVTSITFTVLN*LEASHNFHSFS Trigger: TGAGAATGAGTGGAAATTGTGACTGGCTTCTAGCCAGTTGAGTACCGTGAAGGTGATGGATGTCACTCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 72 bp | TGGAAGATCTCAAGAAGTGAACCTTGGCTGACCCACTaGTGCACATCTTTAAAATCCCTCCCTTCCGCACTT | + |
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Preference number: 6 (lower is better) Translates to: WKISRSEPWLTH*CTSLKSLPSAL Trigger: AAGTGCGGAAGGGAGGGATTTTAAAGATGTGCACAAGTGGGTCAGCCAAGGTTCACTTCTTGAGATCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CAA 90 bp | TTCTGGCAGGCTTCTGCTTCTGTCTTCTTGAGATGGCACCATGCCTaGGTTTCTAGTTCTTTCGAAGCAAGTGCAAAATTGAGAACAACA | + |
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Preference number: 6 (lower is better) Translates to: FWQASASVFLRWHHA*VSSSFEASAKLRTT Trigger: TGTTGTTCTCAATTTTGCACTTGCTTCGAAAGAACTAGAAACCAAGGCATGGTGCCATCTCAAGAAGACAGAAGCAGAAGCCTGCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 90 bp | ATAAATATCTGGAAGATCTCAAGAAGTGAACCTTGGCTGACCCACTaGTGCACATCTTTAAAATCCCTCCCTTCCGCACTTTCTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: INIWKISRSEPWLTH*CTSLKSLPSALSVE Trigger: CTCCACAGAAAGTGCGGAAGGGAGGGATTTTAAAGATGTGCACAAGTGGGTCAGCCAAGGTTCACTTCTTGAGATCTTCCAGATATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 72 bp | ATGAACATCCCCTCCCATGAACTCCTAATAAATATCTaGAAGATCTCAAGAAGTGAACCTTGGCTGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: MNIPSHELLINI*KISRSEPWLTH Trigger: GTGGGTCAGCCAAGGTTCACTTCTTGAGATCTTCCAGATATTTATTAGGAGTTCATGGGAGGGGATGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CAA 72 bp | GCTTCTGCTTCTGTCTTCTTGAGATGGCACCATGCCTaGGTTTCTAGTTCTTTCGAAGCAAGTGCAAAATTG | + |
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Preference number: 6 (lower is better) Translates to: ASASVFLRWHHA*VSSSFEASAKL Trigger: CAATTTTGCACTTGCTTCGAAAGAACTAGAAACCAAGGCATGGTGCCATCTCAAGAAGACAGAAGCAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS GCA 72 bp | CAGGCTACATCTGAACAATTCCATCATCAGCAGACATaGTTATCTCAGTCTAGCCATAGACTTAAAAGTACC | + |
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Preference number: 6 (lower is better) Translates to: QATSEQFHHQQT*LSQSSHRLKST Trigger: GGTACTTTTAAGTCTATGGCTAGACTGAGATAAGCATGTCTGCTGATGATGGAATTGTTCAGATGTAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 72 bp | GGAAAGCTACACCGGTTATTCTCGGTTCTCTCCATCTaGCTTAGAATTATTGTCAGTTTCTTCAAAATGCTG | + |
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Preference number: 6 (lower is better) Translates to: GKLHRLFSVLSI*LRIIVSFFKML Trigger: CAGCATTTTGAAGAAACTGACAATAATTCTAAGCCAGATGGAGAGAACCGAGAATAACCGGTGTAGCTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 90 bp | GGGTCATTTCATCATTGTCCATTCCCAAGGGTTTACATATGTTCTTaGTCTGTATCCCTACAGATCTGCATTTCTTTGTCAATGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GSFHHCPFPRVYICS*SVSLQICISLSMEV Trigger: CACTTCCATTGACAAAGAAATGCAGATCTGTAGGGATACAGACAAAGAACATATGTAAACCCTTGGGAATGGACAATGATGAAATGACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CCA 72 bp | CTAATAAATATCTGGAAGATCTCAAGAAGTGAACCTTaGCTGACCCACTTGTGCACATCTTTAAAATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LINIWKISRSEP*LTHLCTSLKSL Trigger: GAGGGATTTTAAAGATGTGCACAAGTGGGTCAGCCAAGGTTCACTTCTTGAGATCTTCCAGATATTTATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CAA 90 bp | AGCTACACCGGTTATTCTCGGTTCTCTCCATCTGGCTTAGAATTATaGTCAGTTTCTTCAAAATGCTGGAATTTGGTTGTTAGTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: SYTGYSRFSPSGLEL*SVSSKCWNLVVSHF Trigger: AAAATGACTAACAACCAAATTCCAGCATTTTGAAGAAACTGACAATAATTCTAAGCCAGATGGAGAGAACCGAGAATAACCGGTGTAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS TCA 72 bp | TTAAATTTTTCTCCAAAGAATGCATATACCTCTGACTaGTTTAGGAAAAGGGCCGCAAACAAGAGATTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LNFSPKNAYTSD*FRKRAANKRFW Trigger: CCAGAATCTCTTGTTTGCGGCCCTTTTCCTAAATCAGTCAGAGGTATATGCATTCTTTGGAGAAAAATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663633.1 |
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| CDS CAA 72 bp | ATAACTTTCCCGTTTTCGCACAACTCAAATCACAGGTaGCCTAACTCCATAGTTCTTTCTATCACATTATAC | + |
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Preference number: 6 (lower is better) Translates to: ITFPFSHNSNHR*PNSIVLSITLY Trigger: GTATAATGTGATAGAAAGAACTATGGAGTTAGGCAACCTGTGATTTGAGTTGTGCGAAAACGGGAAAGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 72 bp | TTATTATCTCACTTGATGGAAGTGGAAACAGAGGCTTaGACTAAACAAATAACTTTCCCGTTTTCGCACAAC | + |
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Preference number: 6 (lower is better) Translates to: LLSHLMEVETEA*TKQITFPFSHN Trigger: GTTGTGCGAAAACGGGAAAGTTATTTGTTTAGTCAAAGCCTCTGTTTCCACTTCCATCAAGTGAGATAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 72 bp | GGTTATTCTCGGTTCTCTCCATCTGGCTTAGAATTATaGTCAGTTTCTTCAAAATGCTGGAATTTGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: GYSRFSPSGLEL*SVSSKCWNLVV Trigger: AACAACCAAATTCCAGCATTTTGAAGAAACTGACAATAATTCTAAGCCAGATGGAGAGAACCGAGAATAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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| CDS CAA 90 bp | AAGTACATATTATTATCTCACTTGATGGAAGTGGAAACAGAGGCTTaGACTAAACAAATAACTTTCCCGTTTTCGCACAACTCAAATCAC | + |
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Preference number: 6 (lower is better) Translates to: KYILLSHLMEVETEA*TKQITFPFSHNSNH Trigger: GTGATTTGAGTTGTGCGAAAACGGGAAAGTTATTTGTTTAGTCAAAGCCTCTGTTTCCACTTCCATCAAGTGAGATAATAATATGTACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657957.1 |
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