RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01324 (Homo sapiens)

Ensembl gene IDs: ENSG00000241767

Ensembl transcript IDs: ENST00000463978.1, ENST00000497379.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GGTATTCTTCCTGTGTGTCAGTCTCTGTGTCCAAACTGCACCACTTaGTTAGTTTCTCCAGTGAAGCCAACACGCATGCAGGAACCCCGC +
Preference number: 5 (lower is better)
Translates to: GILPVCQSLCPNCTT*LVSPVKPTRMQEPR
Trigger: GCGGGGTTCCTGCATGCGTGTTGGCTTCACTGGAGAAACTAATCAAGTGGTGCAGTTTGGACACAGAGACTGACACACAGGAAGAATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463978.1
CDS GCA 90 bp TTCCAGGCCATTCTCCTAGCTTCTGGTAGCTCCTTGGCTTCTCTATaGAAAACTCCAGTCTTCACATGGTATTCTTCCTGTGTGTCAGTC +
Preference number: 5 (lower is better)
Translates to: FQAILLASGSSLASL*KTPVFTWYSSCVSV
Trigger: GACTGACACACAGGAAGAATACCATGTGAAGACTGGAGTTTTGCATAGAGAAGCCAAGGAGCTACCAGAAGCTAGGAGAATGGCCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463978.1
ENST00000497379.2
CDS CCA 90 bp TCTGGTAGCTCCTTGGCTTCTCTATGCAAAACTCCAGTCTTCACATaGTATTCTTCCTGTGTGTCAGTCTCTGTGTCCAAACTGCACCAC +
Preference number: 5 (lower is better)
Translates to: SGSSLASLCKTPVFT*YSSCVSVSVSKLHH
Trigger: GTGGTGCAGTTTGGACACAGAGACTGACACACAGGAAGAATACCATGTGAAGACTGGAGTTTTGCATAGAGAAGCCAAGGAGCTACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463978.1
CDS GCA 90 bp TCTTCACATGGTATTCTTCCTGTGTGTCAGTCTCTGTGTCCAAACTaGACCTTCCACCGCCTGTCAATATGTAGCTGTTGCACTTTAGTC +
Preference number: 5 (lower is better)
Translates to: SSHGILPVCQSLCPN*TFHRLSICSCCTLV
Trigger: GACTAAAGTGCAACAGCTACATATTGACAGGCGGTGGAAGGTGCAGTTTGGACACAGAGACTGACACACAGGAAGAATACCATGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497379.2
CDS CCA 90 bp TCTGGTAGCTCCTTGGCTTCTCTATGCAAAACTCCAGTCTTCACATaGTATTCTTCCTGTGTGTCAGTCTCTGTGTCCAAACTGCACCTT +
Preference number: 5 (lower is better)
Translates to: SGSSLASLCKTPVFT*YSSCVSVSVSKLHL
Trigger: AAGGTGCAGTTTGGACACAGAGACTGACACACAGGAAGAATACCATGTGAAGACTGGAGTTTTGCATAGAGAAGCCAAGGAGCTACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497379.2
CDS GCA 90 bp CTGTGTCCAAACTGCACCTTCCACCGCCTGTCAATATGTAGCTGTTaGACTTTAGTCAGGCAGTATGAAAATACCGTCAAAAGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LCPNCTFHRLSICSC*TLVRQYENTVKSFR
Trigger: TCTGAAGCTTTTGACGGTATTTTCATACTGCCTGACTAAAGTGCAACAGCTACATATTGACAGGCGGTGGAAGGTGCAGTTTGGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497379.2
CDS CCA 90 bp ATTTATCTCACAATTCAGGATGCTGGAAGTCTGAGATCAAGATGTTaGCAGCGCCATGCTCTCTCTGAAGGCACTAAGGAAAGGTCTGTT +
Preference number: 5 (lower is better)
Translates to: IYLTIQDAGSLRSRC*QRHALSEGTKERSV
Trigger: AACAGACCTTTCCTTAGTGCCTTCAGAGAGAGCATGGCGCTGCCAACATCTTGATCTCAGACTTCCAGCATCCTGAATTGTGAGATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463978.1
ENST00000497379.2
CDS GCA 90 bp AAATTATATGGTTTAAACAGCAGAAATTTATCTCACAATTCAGGATaGTGGAAGTCTGAGATCAAGATGTTGGCAGCGCCATGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KLYGLNSRNLSHNSG*WKSEIKMLAAPCSL
Trigger: GAGAGAGCATGGCGCTGCCAACATCTTGATCTCAGACTTCCAGCATCCTGAATTGTGAGATAAATTTCTGCTGTTTAAACCATATAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463978.1
ENST00000497379.2
CDS TCA 72 bp CCTGTGTGTCAGTCTCTGTGTCCAAACTGCACCACTTaGTTAGTTTCTCCAGTGAAGCCAACACGCATGCAG +
Preference number: 6 (lower is better)
Translates to: PVCQSLCPNCTT*LVSPVKPTRMQ
Trigger: CTGCATGCGTGTTGGCTTCACTGGAGAAACTAATCAAGTGGTGCAGTTTGGACACAGAGACTGACACACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463978.1
CDS GCA 72 bp GGTATTCTTCCTGTGTGTCAGTCTCTGTGTCCAAACTaGACCTTCCACCGCCTGTCAATATGTAGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: GILPVCQSLCPN*TFHRLSICSCC
Trigger: GCAACAGCTACATATTGACAGGCGGTGGAAGGTGCAGTTTGGACACAGAGACTGACACACAGGAAGAATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497379.2
CDS TCA 72 bp CAGAAATTTATCTCACAATTCAGGATGCTGGAAGTCTaGGATCAAGATGTTGGCAGCGCCATGCTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: QKFISQFRMLEV*DQDVGSAMLSL
Trigger: CAGAGAGAGCATGGCGCTGCCAACATCTTGATCTCAGACTTCCAGCATCCTGAATTGTGAGATAAATTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463978.1
ENST00000497379.2
CDS GCA 72 bp ATTCTCCTAGCTTCTGGTAGCTCCTTGGCTTCTCTATaGAAAACTCCAGTCTTCACATGGTATTCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: ILLASGSSLASL*KTPVFTWYSSC
Trigger: ACAGGAAGAATACCATGTGAAGACTGGAGTTTTGCATAGAGAAGCCAAGGAGCTACCAGAAGCTAGGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463978.1
ENST00000497379.2
CDS GCA 72 bp AACTGCACCTTCCACCGCCTGTCAATATGTAGCTGTTaGACTTTAGTCAGGCAGTATGAAAATACCGTCAAA +
Preference number: 6 (lower is better)
Translates to: NCTFHRLSICSC*TLVRQYENTVK
Trigger: TTTGACGGTATTTTCATACTGCCTGACTAAAGTGCAACAGCTACATATTGACAGGCGGTGGAAGGTGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497379.2
CDS GCA 72 bp GGTTTAAACAGCAGAAATTTATCTCACAATTCAGGATaGTGGAAGTCTGAGATCAAGATGTTGGCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: GLNSRNLSHNSG*WKSEIKMLAAP
Trigger: TGGCGCTGCCAACATCTTGATCTCAGACTTCCAGCATCCTGAATTGTGAGATAAATTTCTGCTGTTTAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463978.1
ENST00000497379.2
CDS CCA 72 bp TTAAACAGCAGAAATTTATCTCACAATTCAGGATGCTaGAAGTCTGAGATCAAGATGTTGGCAGCGCCATGC +
Preference number: 6 (lower is better)
Translates to: LNSRNLSHNSGC*KSEIKMLAAPC
Trigger: GCATGGCGCTGCCAACATCTTGATCTCAGACTTCCAGCATCCTGAATTGTGAGATAAATTTCTGCTGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463978.1
ENST00000497379.2