RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01322 (Homo sapiens)

Ensembl gene IDs: ENSG00000244128

Ensembl transcript IDs: ENST00000470138.5, ENST00000494915.2, ENST00000496693.1, ENST00000498616.6, ENST00000651449.1, ENST00000652830.1, ENST00000653747.1, ENST00000653773.1, ENST00000653864.1, ENST00000653967.1, ENST00000654069.1, ENST00000654261.1, ENST00000654580.1, ENST00000654990.1, ENST00000655586.1, ENST00000656293.1, ENST00000657326.1, ENST00000659430.1, ENST00000660780.1, ENST00000661151.1, ENST00000661419.1, ENST00000661555.1, ENST00000663897.1, ENST00000664292.1, ENST00000664927.1, ENST00000665240.1, ENST00000665369.1, ENST00000666398.1, ENST00000666522.1, ENST00000668542.1, ENST00000669761.1, ENST00000670150.1, ENST00000670338.1, ENST00000670403.1, ENST00000670463.1, ENST00000670918.1, ENST00000670998.1

Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCGCGAGTCCAGAAACCCATCTCTGAGCCGCGCGGGATTAAGCCCTaGGGCTCCAAGCTCATTCTCTCCAGCAGCTGGCAACTGGCCGGT +
Preference number: 5 (lower is better)
Translates to: SRVQKPISEPRGIKP*GSKLILSSSWQLAG
Trigger: ACCGGCCAGTTGCCAGCTGCTGGAGAGAATGAGCTTGGAGCCGCAGGGCTTAATCCCGCGCGGCTCAGAGATGGGTTTCTGGACTCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665369.1
CDS GCA 90 bp GAGATATGGGTGTCTGAGCTCAGCCTCTCCTTGGGCGGGGCTTACTaGAGCTGCTGTAGGGGATGGGAGTGTGGTTCCCAGTCCAATGGA +
Preference number: 5 (lower is better)
Translates to: EIWVSELSLSLGGAY*SCCRGWECGSQSNG
Trigger: TCCATTGGACTGGGAACCACACTCCCATCCCCTACAGCAGCTGCAGTAAGCCCCGCCCAAGGAGAGGCTGAGCTCAGACACCCATATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 90 bp CTACCAGGATGGGTAGAGACAGATCACCAAGTGGGGGCAGAGATATaGGTGTCTGAGCTCAGCCTCTCCTTGGGCGGGGCTTACTGCAGC +
Preference number: 5 (lower is better)
Translates to: LPGWVETDHQVGAEI*VSELSLSLGGAYCS
Trigger: GCTGCAGTAAGCCCCGCCCAAGGAGAGGCTGAGCTCAGACACCCATATCTCTGCCCCCACTTGGTGATCTGTCTCTACCCATCCTGGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS TCA 90 bp CACTGTGCTTCCCCAACACCACCAAGTCTATTTCCAGGTAGCCAGTaGCCAGGGCTGAGAACTTGCCCCAGTCCACAAGCCTCCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HCASPTPPSLFPGSQ*PGLRTCPSPQASLL
Trigger: CAGCAGGGAGGCTTGTGGACTGGGGCAAGTTCTCAGCCCTGGTCACTGGCTACCTGGAAATAGACTTGGTGGTGTTGGGGAAGCACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 90 bp GGGGAAAGCCAGCAGTCACAGGCTTCACCCTGCTCCTATGCAGCCTaGAGTCCTAAAGGGTGTTCTCAGTCCCACTGTGCTTCCCCAACA +
Preference number: 5 (lower is better)
Translates to: GESQQSQASPCSYAA*SPKGCSQSHCASPT
Trigger: TGTTGGGGAAGCACAGTGGGACTGAGAACACCCTTTAGGACTGCAGGCTGCATAGGAGCAGGGTGAAGCCTGTGACTGCTGGCTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 90 bp GTGATTATGGCTGCCTCTGCTGAGTCATACAGGTCACCAGGCAAGTaGGGGAAAGCCAGCAGTCACAGGCTTCACCCTGCTCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: VIMAASAESYRSPGK*GKASSHRLHPAPMQ
Trigger: CTGCATAGGAGCAGGGTGAAGCCTGTGACTGCTGGCTTTCCCCCACTTGCCTGGTGACCTGTATGACTCAGCAGAGGCAGCCATAATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 90 bp CATGATTTCACAGGAAGTCCTGCCGGTTTGTTGAGTTCCATAGGCTaGACAGGAAGCATGGCTAGGAGGCCTCAGGAACCTCATGATCAG +
Preference number: 5 (lower is better)
Translates to: HDFTGSPAGLLSSIG*TGSMARRPQEPHDQ
Trigger: CTGATCATGAGGTTCCTGAGGCCTCCTAGCCATGCTTCCTGTGCAGCCTATGGAACTCAACAAACCGGCAGGACTTCCTGTGAAATCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000498616.6
ENST00000652830.1
ENST00000655586.1
ENST00000661151.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670918.1
CDS CCA 90 bp AGCAGGCTTGAGAGCCGGGAAAAGCTGACGTTTAGTTTGAGTCTGTaGTTTCCTGTGGTTTGCTTTGGCTCTCAGGTGCTTAGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: SRLESREKLTFSLSL*FPVVCFGSQVLRGR
Trigger: CCTACCTCTAAGCACCTGAGAGCCAAAGCAAACCACAGGAAACCACAGACTCAAACTAAACGTCAGCTTTTCCCGGCTCTCAAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000653747.1
ENST00000654990.1
ENST00000656293.1
ENST00000666522.1
ENST00000670338.1
CDS TCA 90 bp TGTCCATCAGCTTCCATCTGGAAACCATTGCTTTCTCTGGGGCACTaGCACCCCGCTATACATGCAATGAAGGAGCCTCTCTTCTCTACA +
Preference number: 5 (lower is better)
Translates to: CPSASIWKPLLSLGH*HPAIHAMKEPLFST
Trigger: TGTAGAGAAGAGAGGCTCCTTCATTGCATGTATAGCGGGGTGTCAGTGCCCCAGAGAAAGCAATGGTTTCCAGATGGAAGCTGATGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS TCA 90 bp GCAGACTCACAAGTTTTCTTCAGCATCTCAGGGAGCCTGCGGTGGTaGTCAAGATCCTTCTGTGGATTCTCTCAGCTTTCCTGGTATGGT +
Preference number: 5 (lower is better)
Translates to: ADSQVFFSISGSLRW*SRSFCGFSQLSWYG
Trigger: ACCATACCAGGAAAGCTGAGAGAATCCACAGAAGGATCTTGATCACCACCGCAGGCTCCCTGAGATGCTGAAGAAAACTTGTGAGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 90 bp CAGGTACCTCAGTTGGAAATGCAGAAATCACCCATCTTGTACATCTaGGAGCTGCAGACCAGAGCTGTTCCTATTTGGCCATCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: QVPQLEMQKSPILYI*ELQTRAVPIWPSEV
Trigger: CACCTCAGATGGCCAAATAGGAACAGCTCTGGTCTGCAGCTCCCAGATGTACAAGATGGGTGATTTCTGCATTTCCAACTGAGGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS TCA 90 bp TCAGTAAGCTGGAGTTCCGGAAGAGTCAATGCTGTAGTTCCAGTCTaGCTCCAAAGGCCATGCCAGACTGTATTTGGGAGACACTTCATC +
Preference number: 5 (lower is better)
Translates to: SVSWSSGRVNAVVPV*LQRPCQTVFGRHFI
Trigger: GATGAAGTGTCTCCCAAATACAGTCTGGCATGGCCTTTGGAGTCAGACTGGAACTACAGCATTGACTCTTCCGGAACTCCAGCTTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494915.2
ENST00000664927.1
ENST00000668542.1
CDS GCA 90 bp GGAAGCATGGCTAGGAGGCCTCAGGAACCTCATGATCAGCTCGGCTaGCCAGGATCCATTCTGCCTTTAAATACTACAAAGCAATTTACA +
Preference number: 5 (lower is better)
Translates to: GSMARRPQEPHDQLG*PGSILPLNTTKQFT
Trigger: TGTAAATTGCTTTGTAGTATTTAAAGGCAGAATGGATCCTGGGCAGCCGAGCTGATCATGAGGTTCCTGAGGCCTCCTAGCCATGCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000494915.2
ENST00000498616.6
ENST00000652830.1
ENST00000653864.1
ENST00000653967.1
ENST00000655586.1
ENST00000656293.1
ENST00000661151.1
ENST00000668542.1
ENST00000670150.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670918.1
CDS CCA 90 bp CAGTCCAAATCTGAAGGCCAGAGATCCAGAAGAACTGATCAGTGTTaGAATTTCCAGTCCAAGGTCGAAGGCTCGACAATTGAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: QSKSEGQRSRRTDQC*NFQSKVEGSTIEWG
Trigger: TCCCCACTCAATTGTCGAGCCTTCGACCTTGGACTGGAAATTCCAACACTGATCAGTTCTTCTGGATCTCTGGCCTTCAGATTTGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 90 bp GGATGTTGGCTTCTAACCTCAGGTTTTACCCTTCCTGGAACAAGATaGCTGCAGCAGTGCCAAGCTTCACATTCTTACACAACAGTGTCC +
Preference number: 5 (lower is better)
Translates to: GCWLLTSGFTLPGTR*LQQCQASHSYTTVS
Trigger: GGACACTGTTGTGTAAGAATGTGAAGCTTGGCACTGCTGCAGCCATCTTGTTCCAGGAAGGGTAAAACCTGAGGTTAGAAGCCAACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000655586.1
ENST00000656293.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS TCA 90 bp GCTTTCCTGGTATGGTCCTGCAGTAGTTCTTGGAGCAAAAGTTCATaGTGTGAGTCTCCACACACTGGTCTGTCTGTCTCAGTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: AFLVWSCSSSWSKSS*CESPHTGLSVSVEV
Trigger: AACTTCCACTGAGACAGACAGACCAGTGTGTGGAGACTCACATCATGAACTTTTGCTCCAAGAACTACTGCAGGACCATACCAGGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000652830.1
ENST00000666398.1
ENST00000670150.1
CDS TCA 90 bp TCTTCAGTCCTGAAAACAACCGCAGGGCATCATGGTTGTGGAAGCTaGAAAGTTCCAAGATCTGTAGTCAGTAAGCTGGAGTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: SSVLKTTAGHHGCGS*KVPRSVVSKLEFRK
Trigger: CTTCCGGAACTCCAGCTTACTGACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGATGCCCTGCGGTTGTTTTCAGGACTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS GCA 90 bp TATTTGGGTAGACTATGTCGATGGGAAGCTCTGGGATTCAAGGTCTaGTGTTCAGATTCTTTTGTCCCTCGGGGTGCTTCCTTAATGTGG +
Preference number: 5 (lower is better)
Translates to: YLGRLCRWEALGFKV*CSDSFVPRGASLMW
Trigger: CCACATTAAGGAAGCACCCCGAGGGACAAAAGAATCTGAACAGCAGACCTTGAATCCCAGAGCTTCCCATCGACATAGTCTACCCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 90 bp CCCATCTTGTACATCTGGGAGCTGCAGACCAGAGCTGTTCCTATTTaGCCATCTGAGGTGAATTCATTTTCAGTTTGGGTGCCAAGACAT +
Preference number: 5 (lower is better)
Translates to: PILYIWELQTRAVPI*PSEVNSFSVWVPRH
Trigger: ATGTCTTGGCACCCAAACTGAAAATGAATTCACCTCAGATGGCCAAATAGGAACAGCTCTGGTCTGCAGCTCCCAGATGTACAAGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS TCA 90 bp TCTGGGAGCTGCAGACCAGAGCTGTTCCTATTTGGCCATCTGAGGTaGATTCATTTTCAGTTTGGGTGCCAAGACATTATTTCAACAGGG +
Preference number: 5 (lower is better)
Translates to: SGSCRPELFLFGHLR*IHFQFGCQDIISTG
Trigger: CCCTGTTGAAATAATGTCTTGGCACCCAAACTGAAAATGAATTCACCTCAGATGGCCAAATAGGAACAGCTCTGGTCTGCAGCTCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS TCA 90 bp TATGAGGCCAGCATCATCCTGATACCAAAGCATGGTTGTGGAAGCTaGAAAGTTCCAAGATCTGTAGTCAGTAAGCTGGAGTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: YEASIILIPKHGCGS*KVPRSVVSKLEFRK
Trigger: CTTCCGGAACTCCAGCTTACTGACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGCTTTGGTATCAGGATGATGCTGGCCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654069.1
ENST00000654580.1
ENST00000670150.1
CDS TCA 90 bp CTGGGAAGAGATCACAATTATACCTGTTTTGGCTCCCAAGTTGTGTaGTCCCAAGACAGAGCCAGGTGGGTACATATCAGCCTTCATTAC +
Preference number: 5 (lower is better)
Translates to: LGRDHNYTCFGSQVV*SQDRARWVHISLHY
Trigger: GTAATGAAGGCTGATATGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000654990.1
ENST00000657326.1
ENST00000665369.1
CDS TCA 90 bp TCTAGCTTCCCAGCAGGCCCCCAGTCAATAATAACACAGCACTCCTaGGATAATGGTCCCGGAATTTTAATACACGTTGCCTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SSFPAGPQSIITQHS*DNGPGILIHVAFLS
Trigger: AGAGAGAAAGGCAACGTGTATTAAAATTCCGGGACCATTATCTCAGGAGTGCTGTGTTATTATTGACTGGGGGCCTGCTGGGAAGCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000670403.1
CDS GCA 90 bp CCAGGAATAAGGTTTAAAAATACAACAGTGATCAGTTCCATAGGCTaGACAGGAAGCATGGCTAGGAGGCCTCAGGAACCTCATGATCAG +
Preference number: 5 (lower is better)
Translates to: PGIRFKNTTVISSIG*TGSMARRPQEPHDQ
Trigger: CTGATCATGAGGTTCCTGAGGCCTCCTAGCCATGCTTCCTGTGCAGCCTATGGAACTGATCACTGTTGTATTTTTAAACCTTATTCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000494915.2
ENST00000653864.1
ENST00000653967.1
ENST00000656293.1
ENST00000670150.1
ENST00000670463.1
CDS GCA 90 bp TTCTTCCAAACTCATTCACATGCCTTTTGGATGACCTCAGGTCCTTaGTGGATCCCGGCTGAAAACATCAGTTCTTTGACATGTGTGCAC +
Preference number: 5 (lower is better)
Translates to: FFQTHSHAFWMTSGP*WIPAENISSLTCVH
Trigger: GTGCACACATGTCAAAGAACTGATGTTTTCAGCCGGGATCCAGCAAGGACCTGAGGTCATCCAAAAGGCATGTGAATGAGTTTGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS CCA 90 bp TTCCAAACTCATTCACATGCCTTTTGGATGACCTCAGGTCCTTGCTaGATCCCGGCTGAAAACATCAGTTCTTTGACATGTGTGCACCTT +
Preference number: 5 (lower is better)
Translates to: FQTHSHAFWMTSGPC*IPAENISSLTCVHL
Trigger: AAGGTGCACACATGTCAAAGAACTGATGTTTTCAGCCGGGATCCAGCAAGGACCTGAGGTCATCCAAAAGGCATGTGAATGAGTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS TCA 90 bp AAGAGGGAATCCTCCCTGACTCATTTTATGAGGCCAGCATCATCCTaGTACCAAAGCATGGTTGTGGAAGCTGAAAAGTTCCAAGATCTG +
Preference number: 5 (lower is better)
Translates to: KRESSLTHFMRPASS*YQSMVVEAEKFQDL
Trigger: CAGATCTTGGAACTTTTCAGCTTCCACAACCATGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTCAGGGAGGATTCCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000654069.1
ENST00000654580.1
ENST00000670150.1
CDS GCA 90 bp CCAGGAATAAGGTTTAAAAATACAACAGTGATCAGTTCCATAGGCTaGACAGGAAGCATGGCTAGGAGGCCTCAGGAACCTCATGATTGT +
Preference number: 5 (lower is better)
Translates to: PGIRFKNTTVISSIG*TGSMARRPQEPHDC
Trigger: ACAATCATGAGGTTCCTGAGGCCTCCTAGCCATGCTTCCTGTGCAGCCTATGGAACTGATCACTGTTGTATTTTTAAACCTTATTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000653773.1
CDS CCA 90 bp CAGAAGTTACATTCACCATTATATGCATTCTCTCCTAGCTGCTGGTaGTTGCTGGCAATCCTTGGTGTTCCTGGGCTTGTAGATACTTGT +
Preference number: 5 (lower is better)
Translates to: QKLHSPLYAFSPSCW*LLAILGVPGLVDTC
Trigger: ACAAGTATCTACAAGCCCAGGAACACCAAGGATTGCCAGCAACCACCAGCAGCTAGGAGAGAATGCATATAATGGTGAATGTAACTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 90 bp AATCAAGAACTAGGAGCAGAAGGTGAGCAGAGGATGGGCAGAAGATaGATGTCCCAGCTCAAGAAGAGAGAGCAAATTCATTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: NQELGAEGEQRMGRR*MSQLKKREQIHSFS
Trigger: AGAGAAAGAATGAATTTGCTCTCTCTTCTTGAGCTGGGACATCCATCTTCTGCCCATCCTCTGCTCACCTTCTGCTCCTAGTTCTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 90 bp AGTCTCATTCTTTTTCCTGGGAAGAGATCACAATTATACCTGTTTTaGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCAGGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: SLILFPGKRSQLYLF*LPSCVIPRQSQVGT
Trigger: TGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAGAATGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS CCA 90 bp GATCATTACCTTTTTCCTGGGAAGAGATCACAATTATACCTGTTTTaGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCAGGTGGGTACA +
Preference number: 5 (lower is better)
Translates to: DHYLFPGKRSQLYLF*LPSCVIPRQSQVGT
Trigger: TGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAGGTAATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS TCA 90 bp TTACACAACAGTGTCCAGCTGATTGTTGAGAGGTTAGGTCTTGTTTaGCACCTCCCCATCCTCACCTTATTTCACAAGTTCCCATATGTG +
Preference number: 5 (lower is better)
Translates to: LHNSVQLIVERLGLV*HLPILTLFHKFPYV
Trigger: CACATATGGGAACTTGTGAAATAAGGTGAGGATGGGGAGGTGTCAAACAAGACCTAACCTCTCAACAATCAGCTGGACACTGTTGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656293.1
CDS TCA 90 bp TCAGTAAGCTGGAGTTCCGGAAGAGTCAATGCTGTAGTTCCAGTCTaGCTCCAAAGGCCTTTTTCTTTTTGTAGCCAAGTCTTACTTCTG +
Preference number: 5 (lower is better)
Translates to: SVSWSSGRVNAVVPV*LQRPFSFCSQVLLL
Trigger: CAGAAGTAAGACTTGGCTACAAAAAGAAAAAGGCCTTTGGAGTCAGACTGGAACTACAGCATTGACTCTTCCGGAACTCCAGCTTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000664292.1
CDS TCA 90 bp GTATTCTTATGCAAAGATACATCGTGGAGCTGTTGTCTTCAGTCCTaGAAACAACCGCAGGGCATCATGGTTGTGGAAGCTGAAAAGTTC +
Preference number: 5 (lower is better)
Translates to: VFLCKDTSWSCCLQS*KQPQGIMVVEAEKF
Trigger: GAACTTTTCAGCTTCCACAACCATGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCATAAGAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS GCA 90 bp TCTGTCTGTCTCAGTGGAAGTTGCAGATTAGTCCTGCCTCCGATCTaGCATCATGATTTTCTCTACTTCCAGAGTAACATAAATTTGCCC +
Preference number: 5 (lower is better)
Translates to: SVCLSGSCRLVLPPI*HHDFLYFQSNINLP
Trigger: GGGCAAATTTATGTTACTCTGGAAGTAGAGAAAATCATGATGGCAGATCGGAGGCAGGACTAATCTGCAACTTCCACTGAGACAGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000652830.1
ENST00000666398.1
ENST00000670150.1
CDS GCA 90 bp AAATCACTCTCATCTCTGCCTCCGTCTTCACATGGACTTCTTCCTTaGATATCTTCCCATGACCTTATGGTTGTGGAAGCTGAAAAGTTC +
Preference number: 5 (lower is better)
Translates to: KSLSSLPPSSHGLLP*ISSHDLMVVEAEKF
Trigger: GAACTTTTCAGCTTCCACAACCATAAGGTCATGGGAAGATATGCAAGGAAGAAGTCCATGTGAAGACGGAGGCAGAGATGAGAGTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 90 bp TTCCCAAGAGATTATGATTATGATTTTTGTCTTCAGCTACCAGGATaGGTAGAGACAGATCACCAAGTGGGGGCAGAGATATGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: FPRDYDYDFCLQLPG*VETDHQVGAEIWVS
Trigger: AGACACCCATATCTCTGCCCCCACTTGGTGATCTGTCTCTACCCATCCTGGTAGCTGAAGACAAAAATCATAATCATAATCTCTTGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 90 bp CACAAGTCCTTCAGGGTCTTAAGACTCTTAGGAAAACAGTTGCTTTaGCTTCTGGCATTCAGCCTGTCATTTTCCATCAGAAGTAATCAC +
Preference number: 5 (lower is better)
Translates to: HKSFRVLRLLGKQLL*LLAFSLSFSIRSNH
Trigger: GTGATTACTTCTGATGGAAAATGACAGGCTGAATGCCAGAAGGCAAAGCAACTGTTTTCCTAAGAGTCTTAAGACCCTGAAGGACTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS CCA 90 bp CCTGCCGGTTTGTTGCTGCCAGGTTACTGTGATTTTTGGCATCATTaGCATACAGCGATAGTTTGGCCAAATATTGTTTCTATTACTACC +
Preference number: 5 (lower is better)
Translates to: PAGLLLPGYCDFWHH*HTAIVWPNIVSITT
Trigger: GGTAGTAATAGAAACAATATTTGGCCAAACTATCGCTGTATGCCAATGATGCCAAAAATCACAGTAACCTGGCAGCAACAAACCGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000494915.2
ENST00000653773.1
ENST00000653864.1
ENST00000653967.1
ENST00000656293.1
ENST00000670150.1
ENST00000670463.1
CDS CCA 90 bp GATGGAGAAGATGTGATTTGTTATGGAAACTGGTTTTCACGGTTATaGAGGCTAATTCCCACAATATGCTATCTGCATGCTAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: DGEDVICYGNWFSRL*RLIPTICYLHARQP
Trigger: TGGCTGTCTAGCATGCAGATAGCATATTGTGGGAATTAGCCTCCATAACCGTGAAAACCAGTTTCCATAACAAATCACATCTTCTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS TCA 90 bp TCTTCTCAGTTCTGTTTTCCATCCAATAATTATCTCTCCTTCCTGTaGAGCCCTGTGTCTTCAGGAGAATCTATCTCAAGCACAATTCTC +
Preference number: 5 (lower is better)
Translates to: SSQFCFPSNNYLSFL*SPVSSGESISSTIL
Trigger: GAGAATTGTGCTTGAGATAGATTCTCCTGAAGACACAGGGCTTCACAGGAAGGAGAGATAATTATTGGATGGAAAACAGAACTGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496693.1
ENST00000651449.1
CDS GCA 90 bp TTTCTCTCCATTCTAAAAGATTGCCAGTTACTCCAGTACTCACCATaGCAGACTGTATTTGGGAGACACTTCATCAGGTCTAAAAGAGTT +
Preference number: 5 (lower is better)
Translates to: FLSILKDCQLLQYSP*QTVFGRHFIRSKRV
Trigger: AACTCTTTTAGACCTGATGAAGTGTCTCCCAAATACAGTCTGGCATGGTGAGTACTGGAGTAACTGGCAATCTTTTAGAATGGAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000653967.1
CDS CCA 90 bp AGAATTGTTTTTCTGGTTCCTTCTTATTTGGGTAGACTATGTCGATaGGAAGCTCTGGGATTCAAGGTCTGCTGTTCAGATTCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: RIVFLVPSYLGRLCR*EALGFKVCCSDSFV
Trigger: GACAAAAGAATCTGAACAGCAGACCTTGAATCCCAGAGCTTCCCATCGACATAGTCTACCCAAATAAGAAGGAACCAGAAAAACAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS TCA 90 bp ATGTTTGCTCTAGAGAAGAATATCGTGGTTGATAAGGCCATTTTGTaGGCCAGGACAACTGAGTTCAGACACCACAGTTTAATCATATGT +
Preference number: 5 (lower is better)
Translates to: MFALEKNIVVDKAIL*ARTTEFRHHSLIIC
Trigger: ACATATGATTAAACTGTGGTGTCTGAACTCAGTTGTCCTGGCTCACAAAATGGCCTTATCAACCACGATATTCTTCTCTAGAGCAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666522.1
CDS CCA 90 bp AGAGCTGTTCCTATTTGGCCATCTGAGGTGAATTCATTTTCAGTTTaGGTGCCAAGACATTATTTCAACAGGGAAAGAATATCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: RAVPIWPSEVNSFSV*VPRHYFNRERISFS
Trigger: TGAAAAGGATATTCTTTCCCTGTTGAAATAATGTCTTGGCACCCAAACTGAAAATGAATTCACCTCAGATGGCCAAATAGGAACAGCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS CCA 90 bp CCAGGTTACTGTGATTTTTGGCATCATTGGCATACAGCGATAGTTTaGCCAAATATTGTTTCTATTACTACCATTTCATTCCCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: PGYCDFWHHWHTAIV*PNIVSITTISFPEV
Trigger: TACCTCTGGGAATGAAATGGTAGTAATAGAAACAATATTTGGCCAAACTATCGCTGTATGCCAATGATGCCAAAAATCACAGTAACCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000494915.2
ENST00000653773.1
ENST00000653864.1
ENST00000653967.1
ENST00000656293.1
ENST00000670150.1
ENST00000670463.1
CDS CCA 90 bp CAATTCAGGCATATATATCTTGTTCCAGGATCATTACCTTTTTCCTaGGAAGAGATCACAATTATACCTGTTTTGGCTCCCAAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: QFRHIYLVPGSLPFS*EEITIIPVLAPKLC
Trigger: ACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAGGTAATGATCCTGGAACAAGATATATATGCCTGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS GCA 90 bp AATTCATCTCCACCTCCTGGGAGCACAGTATCTCCATATGTTATTTaGAATTCAGGCATATATATCTTGTTCCAGGATCATTACCTTTTT +
Preference number: 5 (lower is better)
Translates to: NSSPPPGSTVSPYVI*NSGIYILFQDHYLF
Trigger: AAAAAGGTAATGATCCTGGAACAAGATATATATGCCTGAATTGCAAATAACATATGGAGATACTGTGCTCCCAGGAGGTGGAGATGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS TCA 90 bp ATCTGTGTTGTTTTTCTCCTGATTAGACCAGAATTATCAGTCATTTaGAATAATACCACAGAGGGAAATGCCTTTCTCATCACATCATAC +
Preference number: 5 (lower is better)
Translates to: ICVVFLLIRPELSVI*NNTTEGNAFLITSY
Trigger: GTATGATGTGATGAGAAAGGCATTTCCCTCTGTGGTATTATTTCAAATGACTGATAATTCTGGTCTAATCAGGAGAAAAACAACACAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000657326.1
ENST00000665369.1
CDS TCA 90 bp GTTATTCTGACTGGAAATAAACACCTGCAGTTACTCCTGATCCCATaGCAAAATCTTTTTGTGAGTGAGAATTGTGTATTGTTATCAGAA +
Preference number: 5 (lower is better)
Translates to: VILTGNKHLQLLLIP*QNLFVSENCVLLSE
Trigger: TTCTGATAACAATACACAATTCTCACTCACAAAAAGATTTTGTCATGGGATCAGGAGTAACTGCAGGTGTTTATTTCCAGTCAGAATAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS CCA 90 bp AGTAGGATGTATATACAGAGAGAGACTTATTTATTAGAAAGGAATTaGCTTACATGGTTGTGGAAGCTGAAAAGTTCCAAGATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SRMYIQRETYLLERN*LTWLWKLKSSKICS
Trigger: ACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGTAAGCCAATTCCTTTCTAATAAATAAGTCTCTCTCTGTATATACATCCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666522.1
CDS GCA 72 bp GTGTCTGAGCTCAGCCTCTCCTTGGGCGGGGCTTACTaGAGCTGCTGTAGGGGATGGGAGTGTGGTTCCCAG +
Preference number: 6 (lower is better)
Translates to: VSELSLSLGGAY*SCCRGWECGSQ
Trigger: CTGGGAACCACACTCCCATCCCCTACAGCAGCTGCAGTAAGCCCCGCCCAAGGAGAGGCTGAGCTCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 72 bp TGCCCTTCCTGGGTGAGGCAATGCCCCACCCTGTTTTaGATCGCCCTCTGTGGGCTGCACCCACTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: CPSWVRQCPTLF*IALCGLHPLSN
Trigger: GTTGGACAGTGGGTGCAGCCCACAGAGGGCGATCCAAAACAGGGTGGGGCATTGCCTCACCCAGGAAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS CCA 72 bp GGGCAGAGATATGGGTGTCTGAGCTCAGCCTCTCCTTaGGCGGGGCTTACTGCAGCTGCTGTAGGGGATGGG +
Preference number: 6 (lower is better)
Translates to: GQRYGCLSSASP*AGLTAAAVGDG
Trigger: CCCATCCCCTACAGCAGCTGCAGTAAGCCCCGCCCAAGGAGAGGCTGAGCTCAGACACCCATATCTCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 72 bp GAGCTCAGCCTCTCCTTGGGCGGGGCTTACTGCAGCTaGTGTAGGGGATGGGAGTGTGGTTCCCAGTCCAAT +
Preference number: 6 (lower is better)
Translates to: ELSLSLGGAYCS*CRGWECGSQSN
Trigger: ATTGGACTGGGAACCACACTCCCATCCCCTACAGCAGCTGCAGTAAGCCCCGCCCAAGGAGAGGCTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 72 bp GTGGTCATGATTTCACAGGAAGTCCTGCCGGTTTGTTaGCAGGTGTGGGGGCAAGCGCCTGCAGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VVMISQEVLPVC*QVWGQAPAVPA
Trigger: AGCTGGGACTGCAGGCGCTTGCCCCCACACCTGGCAACAAACCGGCAGGACTTCCTGTGAAATCATGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659430.1
CDS CCA 72 bp TGGGTAGAGACAGATCACCAAGTGGGGGCAGAGATATaGGTGTCTGAGCTCAGCCTCTCCTTGGGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: WVETDHQVGAEI*VSELSLSLGGA
Trigger: AGCCCCGCCCAAGGAGAGGCTGAGCTCAGACACCCATATCTCTGCCCCCACTTGGTGATCTGTCTCTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS TCA 72 bp TCCCCAACACCACCAAGTCTATTTCCAGGTAGCCAGTaGCCAGGGCTGAGAACTTGCCCCAGTCCACAAGCC +
Preference number: 6 (lower is better)
Translates to: SPTPPSLFPGSQ*PGLRTCPSPQA
Trigger: GGCTTGTGGACTGGGGCAAGTTCTCAGCCCTGGTCACTGGCTACCTGGAAATAGACTTGGTGGTGTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 72 bp ACAGGAAGTCCTGCCGGTTTGTTGAGTTCCATAGGCTaGACAGGAAGCATGGCTAGGAGGCCTCAGGAACCT +
Preference number: 6 (lower is better)
Translates to: TGSPAGLLSSIG*TGSMARRPQEP
Trigger: AGGTTCCTGAGGCCTCCTAGCCATGCTTCCTGTGCAGCCTATGGAACTCAACAAACCGGCAGGACTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000498616.6
ENST00000652830.1
ENST00000655586.1
ENST00000661151.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670918.1
CDS TCA 72 bp CTCCCCATCCTCACCTGTTTTGGCTCCCAAGTTGTGTaGTCCCAAGACAGAGCCAGGTGGGTACATATCAGC +
Preference number: 6 (lower is better)
Translates to: LPILTCFGSQVV*SQDRARWVHIS
Trigger: GCTGATATGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTGAGGATGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000655586.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS CCA 72 bp CTCAGGGAGCCTGCGGTGGTGATCAAGATCCTTCTGTaGATTCTCTCAGCTTTCCTGGTATGGTCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: LREPAVVIKILL*ILSAFLVWSCS
Trigger: ACTGCAGGACCATACCAGGAAAGCTGAGAGAATCCACAGAAGGATCTTGATCACCACCGCAGGCTCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000652830.1
ENST00000666398.1
ENST00000670150.1
CDS CAA 72 bp GACACCTCCCCATCCTCACCTGTTTTGGCTCCCAAGTaGTGTGATCCCAAGACAGAGCCAGGTGGGTACATA +
Preference number: 6 (lower is better)
Translates to: DTSPSSPVLAPK*CDPKTEPGGYI
Trigger: TATGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTGAGGATGGGGAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000655586.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS CAA 90 bp AGAGCACATGGTGGTCATGATTTCACAGGAAGTCCTGCCGGTTTGTaGAGTTCCATAGGCTGCACAGGAAGCATGGCTAGGAGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: RAHGGHDFTGSPAGL*SSIGCTGSMARRPQ
Trigger: CTGAGGCCTCCTAGCCATGCTTCCTGTGCAGCCTATGGAACTCAACAAACCGGCAGGACTTCCTGTGAAATCATGACCACCATGTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000498616.6
ENST00000652830.1
ENST00000655586.1
ENST00000661151.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670918.1
CDS TCA 72 bp GCTTCCATCTGGAAACCATTGCTTTCTCTGGGGCACTaGCACCCCGCTATACATGCAATGAAGGAGCCTCTC +
Preference number: 6 (lower is better)
Translates to: ASIWKPLLSLGH*HPAIHAMKEPL
Trigger: GAGAGGCTCCTTCATTGCATGTATAGCGGGGTGTCAGTGCCCCAGAGAAAGCAATGGTTTCCAGATGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS TCA 72 bp ATACCAGCACCTGCTCTGGTGGAGGTAGCAGGGGAGTaGAGTGGACTTTGTGAGGGACTTTGGTCGTGTTTT +
Preference number: 6 (lower is better)
Translates to: IPAPALVEVAGE*SGLCEGLWSCF
Trigger: AAAACACGACCAAAGTCCCTCACAAAGTCCACTTCACTCCCCTGCTACCTCCACCAGAGCAGGTGCTGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 72 bp AGGTCTTGTTTGACACCTCCCCATCCTCACCTGTTTTaGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: RSCLTPPHPHLF*LPSCVIPRQSQ
Trigger: CTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTGAGGATGGGGAGGTGTCAAACAAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000655586.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS CAA 72 bp GGTGGTCATGATTTCACAGGAAGTCCTGCCGGTTTGTaGAGTTCCATAGGCTGCACAGGAAGCATGGCTAGG +
Preference number: 6 (lower is better)
Translates to: GGHDFTGSPAGL*SSIGCTGSMAR
Trigger: CCTAGCCATGCTTCCTGTGCAGCCTATGGAACTCAACAAACCGGCAGGACTTCCTGTGAAATCATGACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000498616.6
ENST00000652830.1
ENST00000655586.1
ENST00000661151.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670918.1
CDS CAA 90 bp GAAAGAGCACATGGTGGTCATGATTTCACAGGAAGTCCTGCCGGTTaGTTGAGTTCCATAGGCTGCACAGGAAGCATGGCTAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: ERAHGGHDFTGSPAG*LSSIGCTGSMARRP
Trigger: AGGCCTCCTAGCCATGCTTCCTGTGCAGCCTATGGAACTCAACAAACCGGCAGGACTTCCTGTGAAATCATGACCACCATGTGCTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000498616.6
ENST00000652830.1
ENST00000655586.1
ENST00000661151.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670918.1
CDS CAA 90 bp GTGCTGCTTTTGTCTTTGTTGGCCTCTAGCCAGGAGGTGGCACTTTaGAGAGTGCATCAGCTGCAGCCCTATAAGGAAATGCGAACTTGC +
Preference number: 6 (lower is better)
Translates to: VLLLSLLASSQEVAL*RVHQLQPYKEMRTC
Trigger: GCAAGTTCGCATTTCCTTATAGGGCTGCAGCTGATGCACTCTCAAAAGTGCCACCTCCTGGCTAGAGGCCAACAAAGACAAAAGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS TCA 72 bp TGTCTTTGTTGGCCTCTAGCCAGGAGGTGGCACTTTTaGGAGTGCATCAGCTGCAGCCCTATAAGGAAATGC +
Preference number: 6 (lower is better)
Translates to: CLCWPLARRWHF*ECISCSPIRKC
Trigger: GCATTTCCTTATAGGGCTGCAGCTGATGCACTCTCAAAAGTGCCACCTCCTGGCTAGAGGCCAACAAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 72 bp CACTGTCCAACCAGTCCCAGGTACCTCAGTTGGAAATaGAGAAATCACCCATCTTGTACATCTGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: HCPTSPRYLSWK*RNHPSCTSGSC
Trigger: GCAGCTCCCAGATGTACAAGATGGGTGATTTCTGCATTTCCAACTGAGGTACCTGGGACTGGTTGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS GCA 72 bp GCTAGGAGGCCTCAGGAACCTCATGATCAGCTCGGCTaGCCAGGATCCATTCTGCCTTTAAATACTACAAAG +
Preference number: 6 (lower is better)
Translates to: ARRPQEPHDQLG*PGSILPLNTTK
Trigger: CTTTGTAGTATTTAAAGGCAGAATGGATCCTGGGCAGCCGAGCTGATCATGAGGTTCCTGAGGCCTCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000494915.2
ENST00000498616.6
ENST00000652830.1
ENST00000653864.1
ENST00000653967.1
ENST00000655586.1
ENST00000656293.1
ENST00000661151.1
ENST00000668542.1
ENST00000670150.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670918.1
CDS GCA 72 bp GTCTCCACACACTGGTCTGTCTGTCTCAGTGGAAGTTaGAGATTAGTCCTGCCTCCGATCTGCCATCATGAT +
Preference number: 6 (lower is better)
Translates to: VSTHWSVCLSGS*RLVLPPICHHD
Trigger: ATCATGATGGCAGATCGGAGGCAGGACTAATCTGCAACTTCCACTGAGACAGACAGACCAGTGTGTGGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000652830.1
ENST00000666398.1
ENST00000670150.1
CDS GCA 72 bp AGACTATGTCGATGGGAAGCTCTGGGATTCAAGGTCTaGTGTTCAGATTCTTTTGTCCCTCGGGGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: RLCRWEALGFKV*CSDSFVPRGAS
Trigger: GGAAGCACCCCGAGGGACAAAAGAATCTGAACAGCAGACCTTGAATCCCAGAGCTTCCCATCGACATAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 72 bp TGCACCCACTGTCCAACCAGTCCCAGGTACCTCAGTTaGAAATGCAGAAATCACCCATCTTGTACATCTGGG +
Preference number: 6 (lower is better)
Translates to: CTHCPTSPRYLS*KCRNHPSCTSG
Trigger: CCCAGATGTACAAGATGGGTGATTTCTGCATTTCCAACTGAGGTACCTGGGACTGGTTGGACAGTGGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS CAA 72 bp CATGGTGGTCATGATTTCACAGGAAGTCCTGCCGGTTaGTTGAGTTCCATAGGCTGCACAGGAAGCATGGCT +
Preference number: 6 (lower is better)
Translates to: HGGHDFTGSPAG*LSSIGCTGSMA
Trigger: AGCCATGCTTCCTGTGCAGCCTATGGAACTCAACAAACCGGCAGGACTTCCTGTGAAATCATGACCACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000498616.6
ENST00000652830.1
ENST00000655586.1
ENST00000661151.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670918.1
CDS CAA 90 bp TTTGCTCTCAGAAATGGAAATACTTATACAGTGAGTGATGCCTTGTaGCAGCTGCTTCGCGAGTCCAGAAACCCATCTCTGAGCCGCGCG +
Preference number: 6 (lower is better)
Translates to: FALRNGNTYTVSDAL*QLLRESRNPSLSRA
Trigger: CGCGCGGCTCAGAGATGGGTTTCTGGACTCGCGAAGCAGCTGCAACAAGGCATCACTCACTGTATAAGTATTTCCATTTCTGAGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000470138.5
ENST00000498616.6
ENST00000653747.1
ENST00000653864.1
ENST00000653967.1
ENST00000654261.1
ENST00000654990.1
ENST00000655586.1
ENST00000656293.1
ENST00000660780.1
ENST00000661151.1
ENST00000664927.1
ENST00000665369.1
ENST00000666398.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670998.1
CDS CAA 90 bp AACCAGTCCCAGGTACCTCAGTTGGAAATGCAGAAATCACCCATCTaGTACATCTGGGAGCTGCAGACCAGAGCTGTTCCTATTTGGCCA +
Preference number: 6 (lower is better)
Translates to: NQSQVPQLEMQKSPI*YIWELQTRAVPIWP
Trigger: TGGCCAAATAGGAACAGCTCTGGTCTGCAGCTCCCAGATGTACAAGATGGGTGATTTCTGCATTTCCAACTGAGGTACCTGGGACTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS CAA 90 bp TCAGGGACCAGCAGGCTTGAGAGCCGGGAAAAGCTGACGTTTAGTTaGAGTCATGCCAGACTGTATTTGGGAGACACTTCATCAGGTCTA +
Preference number: 6 (lower is better)
Translates to: SGTSRLESREKLTFS*SHARLYLGDTSSGL
Trigger: TAGACCTGATGAAGTGTCTCCCAAATACAGTCTGGCATGACTCAAACTAAACGTCAGCTTTTCCCGGCTCTCAAGCCTGCTGGTCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000653864.1
ENST00000654261.1
ENST00000655586.1
ENST00000659430.1
ENST00000665369.1
CDS TCA 72 bp TTTCTCTGGGGCACTGACACCCCGCTATACATGCAATaGAGGAGCCTCTCTTCTCTACAGATCTCAGTGTTC +
Preference number: 6 (lower is better)
Translates to: FLWGTDTPLYMQ*RSLSSLQISVF
Trigger: GAACACTGAGATCTGTAGAGAAGAGAGGCTCCTTCATTGCATGTATAGCGGGGTGTCAGTGCCCCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS TCA 72 bp TGGAGTTCCGGAAGAGTCAATGCTGTAGTTCCAGTCTaGCTCCAAAGGCCATGCCAGACTGTATTTGGGAGA +
Preference number: 6 (lower is better)
Translates to: WSSGRVNAVVPV*LQRPCQTVFGR
Trigger: TCTCCCAAATACAGTCTGGCATGGCCTTTGGAGTCAGACTGGAACTACAGCATTGACTCTTCCGGAACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000494915.2
ENST00000664927.1
ENST00000668542.1
CDS TCA 72 bp AGTGTCCAGCTGATTGTTGAGAGGTTAGGTCTTGTTTaGCACCTCCCCATCCTCACCTGTTTTGGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: SVQLIVERLGLV*HLPILTCFGSQ
Trigger: TTGGGAGCCAAAACAGGTGAGGATGGGGAGGTGTCAAACAAGACCTAACCTCTCAACAATCAGCTGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000655586.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS GCA 72 bp ATTGCTTTCTCTGGGGCACTGACACCCCGCTATACATaGAATGAAGGAGCCTCTCTTCTCTACAGATCTCAG +
Preference number: 6 (lower is better)
Translates to: IAFSGALTPRYT*NEGASLLYRSQ
Trigger: CTGAGATCTGTAGAGAAGAGAGGCTCCTTCATTGCATGTATAGCGGGGTGTCAGTGCCCCAGAGAAAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS GCA 72 bp GGTTTTACCCTTCCTGGAACAAGATGGCTGCAGCAGTaGCAAGCTTCACATTCTTACACAACAGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GFTLPGTRWLQQ*QASHSYTTVSS
Trigger: GCTGGACACTGTTGTGTAAGAATGTGAAGCTTGGCACTGCTGCAGCCATCTTGTTCCAGGAAGGGTAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000655586.1
ENST00000656293.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS CCA 72 bp CTAGGAGCAGAAGGTGAGCAGAGGATGGGCAGAAGATaGATGTCCCAGCTCAAGAAGAGAGAGCAAATTCAT +
Preference number: 6 (lower is better)
Translates to: LGAEGEQRMGRR*MSQLKKREQIH
Trigger: ATGAATTTGCTCTCTCTTCTTGAGCTGGGACATCCATCTTCTGCCCATCCTCTGCTCACCTTCTGCTCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CAA 72 bp TTGTCTTTGTTGGCCTCTAGCCAGGAGGTGGCACTTTaGAGAGTGCATCAGCTGCAGCCCTATAAGGAAATG +
Preference number: 6 (lower is better)
Translates to: LSLLASSQEVAL*RVHQLQPYKEM
Trigger: CATTTCCTTATAGGGCTGCAGCTGATGCACTCTCAAAAGTGCCACCTCCTGGCTAGAGGCCAACAAAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CAA 72 bp CAGCGTGGTGGTTCTGGCTCAACATCTCTCAGGAAATaGTACGCCAGTGTCGCAATTATCTCAGAGCACAAC +
Preference number: 6 (lower is better)
Translates to: QRGGSGSTSLRK*YASVAIISEHN
Trigger: GTTGTGCTCTGAGATAATTGCGACACTGGCGTACAATTTCCTGAGAGATGTTGAGCCAGAACCACCACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS TCA 72 bp TGGTGTTCTGCTCCTTCCCCTAGGAATGGGGCTTCCTaGGAGCTAAACTGTAGTGATTGTTTCCACTCTTCT +
Preference number: 6 (lower is better)
Translates to: WCSAPSPRNGAS*ELNCSDCFHSS
Trigger: AGAAGAGTGGAAACAATCACTACAGTTTAGCTCTCAGGAAGCCCCATTCCTAGGGGAAGGAGCAGAACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS TCA 72 bp TGCAAAGATACATCGTGGAGCTGTTGTCTTCAGTCCTaGAAACAACCGCAGGGCATCATGGTTGTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: CKDTSWSCCLQS*KQPQGIMVVEA
Trigger: AGCTTCCACAACCATGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS TCA 72 bp CCAGCAGGCCCCCAGTCAATAATAACACAGCACTCCTaGGATAATGGTCCCGGAATTTTAATACACGTTGCC +
Preference number: 6 (lower is better)
Translates to: PAGPQSIITQHS*DNGPGILIHVA
Trigger: GGCAACGTGTATTAAAATTCCGGGACCATTATCTCAGGAGTGCTGTGTTATTATTGACTGGGGGCCTGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000670403.1
CDS GCA 72 bp AAATGCAGAAATCACCCATCTTGTACATCTGGGAGCTaGAGACCAGAGCTGTTCCTATTTGGCCATCTGAGG +
Preference number: 6 (lower is better)
Translates to: KCRNHPSCTSGS*RPELFLFGHLR
Trigger: CCTCAGATGGCCAAATAGGAACAGCTCTGGTCTGCAGCTCCCAGATGTACAAGATGGGTGATTTCTGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS GCA 72 bp TGTGAGGGACTTTGGTCGTGTTTTTATTTAGGGTGCTaGTTTTGTCTTTGTTGGCCTCTAGCCAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: CEGLWSCFYLGC*FCLCWPLARRW
Trigger: CCACCTCCTGGCTAGAGGCCAACAAAGACAAAAGCAGCACCCTAAATAAAAACACGACCAAAGTCCCTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CCA 72 bp CAGTTGGAAATGCAGAAATCACCCATCTTGTACATCTaGGAGCTGCAGACCAGAGCTGTTCCTATTTGGCCA +
Preference number: 6 (lower is better)
Translates to: QLEMQKSPILYI*ELQTRAVPIWP
Trigger: TGGCCAAATAGGAACAGCTCTGGTCTGCAGCTCCCAGATGTACAAGATGGGTGATTTCTGCATTTCCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS CCA 72 bp CATTCACCATTATATGCATTCTCTCCTAGCTGCTGGTaGTTGCTGGCAATCCTTGGTGTTCCTGGGCTTGTA +
Preference number: 6 (lower is better)
Translates to: HSPLYAFSPSCW*LLAILGVPGLV
Trigger: TACAAGCCCAGGAACACCAAGGATTGCCAGCAACCACCAGCAGCTAGGAGAGAATGCATATAATGGTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 72 bp AGGTCAGGAATCTTGTTTTGCTCAGCGTGGTGGTTCTaGCTCAACATCTCTCAGGAAATTGTACGCCAGTGT +
Preference number: 6 (lower is better)
Translates to: RSGILFCSAWWF*LNISQEIVRQC
Trigger: ACACTGGCGTACAATTTCCTGAGAGATGTTGAGCCAGAACCACCACGCTGAGCAAAACAAGATTCCTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS CCA 72 bp TCTCTCAGGTCAGGAATCTTGTTTTGCTCAGCGTGGTaGTTCTGGCTCAACATCTCTCAGGAAATTGTACGC +
Preference number: 6 (lower is better)
Translates to: SLRSGILFCSAW*FWLNISQEIVR
Trigger: GCGTACAATTTCCTGAGAGATGTTGAGCCAGAACCACCACGCTGAGCAAAACAAGATTCCTGACCTGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS CAA 72 bp GGGACTTTGGTCGTGTTTTTATTTAGGGTGCTGCTTTaGTCTTTGTTGGCCTCTAGCCAGGAGGTGGCACTT +
Preference number: 6 (lower is better)
Translates to: GTLVVFLFRVLL*SLLASSQEVAL
Trigger: AAGTGCCACCTCCTGGCTAGAGGCCAACAAAGACAAAAGCAGCACCCTAAATAAAAACACGACCAAAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CAA 90 bp TTTTCCTGGGAAGAGATCACAATTATACCTGTTTTGGCTCCCAAGTaGTGTGATCCCAAGACAGAGCCAGGTGGGTACATATCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: FSWEEITIIPVLAPK*CDPKTEPGGYISAF
Trigger: GAAGGCTGATATGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000654990.1
ENST00000657326.1
ENST00000665369.1
CDS CAA 90 bp GGATCATTACCTTTTTCCTGGGAAGAGATCACAATTATACCTGTTTaGGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCAGGTGGGTAC +
Preference number: 6 (lower is better)
Translates to: GSLPFSWEEITIIPV*APKLCDPKTEPGGY
Trigger: GTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAGGTAATGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS TCA 72 bp GTATGGTCCTGCAGTAGTTCTTGGAGCAAAAGTTCATaGTGTGAGTCTCCACACACTGGTCTGTCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: VWSCSSSWSKSS*CESPHTGLSVS
Trigger: TGAGACAGACAGACCAGTGTGTGGAGACTCACATCATGAACTTTTGCTCCAAGAACTACTGCAGGACCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000652830.1
ENST00000666398.1
ENST00000670150.1
CDS TCA 72 bp GATCACAATTATACCTGTTTTGGCTCCCAAGTTGTGTaGTCCCAAGACAGAGCCAGGTGGGTACATATCAGC +
Preference number: 6 (lower is better)
Translates to: DHNYTCFGSQVV*SQDRARWVHIS
Trigger: GCTGATATGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000654990.1
ENST00000657326.1
ENST00000665369.1
CDS TCA 72 bp CTGAAAACAACCGCAGGGCATCATGGTTGTGGAAGCTaGAAAGTTCCAAGATCTGTAGTCAGTAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LKTTAGHHGCGS*KVPRSVVSKLE
Trigger: CTCCAGCTTACTGACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGATGCCCTGCGGTTGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS GCA 72 bp AGGTTTAAAAATACAACAGTGATCAGTTCCATAGGCTaGACAGGAAGCATGGCTAGGAGGCCTCAGGAACCT +
Preference number: 6 (lower is better)
Translates to: RFKNTTVISSIG*TGSMARRPQEP
Trigger: AGGTTCCTGAGGCCTCCTAGCCATGCTTCCTGTGCAGCCTATGGAACTGATCACTGTTGTATTTTTAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000494915.2
ENST00000653773.1
ENST00000653864.1
ENST00000653967.1
ENST00000656293.1
ENST00000670150.1
ENST00000670463.1
CDS GCA 72 bp CTTTGTGAGGGACTTTGGTCGTGTTTTTATTTAGGGTaGTGCTTTTGTCTTTGTTGGCCTCTAGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LCEGLWSCFYLG*CFCLCWPLARR
Trigger: CCTCCTGGCTAGAGGCCAACAAAGACAAAAGCAGCACCCTAAATAAAAACACGACCAAAGTCCCTCACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS GCA 72 bp ACTCATTCACATGCCTTTTGGATGACCTCAGGTCCTTaGTGGATCCCGGCTGAAAACATCAGTTCTTTGACA +
Preference number: 6 (lower is better)
Translates to: THSHAFWMTSGP*WIPAENISSLT
Trigger: TGTCAAAGAACTGATGTTTTCAGCCGGGATCCAGCAAGGACCTGAGGTCATCCAAAAGGCATGTGAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS CCA 72 bp CCTGCCGGTTTGTTGCTGCCAGGTTACTGTGATTTTTaGCATCATTGGCATACAGCGATAGTTTGGCCAAAT +
Preference number: 6 (lower is better)
Translates to: PAGLLLPGYCDF*HHWHTAIVWPN
Trigger: ATTTGGCCAAACTATCGCTGTATGCCAATGATGCCAAAAATCACAGTAACCTGGCAGCAACAAACCGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000494915.2
ENST00000653773.1
ENST00000653864.1
ENST00000653967.1
ENST00000656293.1
ENST00000670150.1
ENST00000670463.1
CDS CCA 72 bp TCTGAAGGCCAGAGATCCAGAAGAACTGATCAGTGTTaGAATTTCCAGTCCAAGGTCGAAGGCTCGACAATT +
Preference number: 6 (lower is better)
Translates to: SEGQRSRRTDQC*NFQSKVEGSTI
Trigger: AATTGTCGAGCCTTCGACCTTGGACTGGAAATTCCAACACTGATCAGTTCTTCTGGATCTCTGGCCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 72 bp CTTCTAACCTCAGGTTTTACCCTTCCTGGAACAAGATaGCTGCAGCAGTGCCAAGCTTCACATTCTTACACA +
Preference number: 6 (lower is better)
Translates to: LLTSGFTLPGTR*LQQCQASHSYT
Trigger: TGTGTAAGAATGTGAAGCTTGGCACTGCTGCAGCCATCTTGTTCCAGGAAGGGTAAAACCTGAGGTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000655586.1
ENST00000656293.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS CCA 72 bp CATTCACATGCCTTTTGGATGACCTCAGGTCCTTGCTaGATCCCGGCTGAAAACATCAGTTCTTTGACATGT +
Preference number: 6 (lower is better)
Translates to: HSHAFWMTSGPC*IPAENISSLTC
Trigger: ACATGTCAAAGAACTGATGTTTTCAGCCGGGATCCAGCAAGGACCTGAGGTCATCCAAAAGGCATGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS CAA 72 bp GTCTTCAGTCCTGAAAACAACCGCAGGGCATCATGGTaGTGGAAGCTGAAAAGTTCCAAGATCTGTAGTCAG +
Preference number: 6 (lower is better)
Translates to: VFSPENNRRASW*WKLKSSKICSQ
Trigger: CTGACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGATGCCCTGCGGTTGTTTTCAGGACTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS CAA 90 bp AAGTCTCATTCTTTTTCCTGGGAAGAGATCACAATTATACCTGTTTaGGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCAGGTGGGTAC +
Preference number: 6 (lower is better)
Translates to: KSHSFSWEEITIIPV*APKLCDPKTEPGGY
Trigger: GTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAGAATGAGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS CAA 90 bp AGGAGGCACAAGTCCTTCAGGGTCTTAAGACTCTTAGGAAAACAGTaGCTTTGCCTTCTGGCATTCAGCCTGTCATTTTCCATCAGAAGT +
Preference number: 6 (lower is better)
Translates to: RRHKSFRVLRLLGKQ*LCLLAFSLSFSIRS
Trigger: ACTTCTGATGGAAAATGACAGGCTGAATGCCAGAAGGCAAAGCAACTGTTTTCCTAAGAGTCTTAAGACCCTGAAGGACTTGTGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS TCA 72 bp GCTTTGGTTTCATCGTGGAGCTGTTGTCTTCAGTCCTaGAAACAACCGCAGGGCATCCTTATTTCACAAGTT +
Preference number: 6 (lower is better)
Translates to: ALVSSWSCCLQS*KQPQGILISQV
Trigger: AACTTGTGAAATAAGGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGAAACCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498616.6
ENST00000668542.1
CDS TCA 72 bp TCCTCCCTGACTCATTTTATGAGGCCAGCATCATCCTaGTACCAAAGCATGGTTGTGGAAGCTGAAAAGTTC +
Preference number: 6 (lower is better)
Translates to: SSLTHFMRPASS*YQSMVVEAEKF
Trigger: GAACTTTTCAGCTTCCACAACCATGCTTTGGTATCAGGATGATGCTGGCCTCATAAAATGAGTCAGGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000654069.1
ENST00000654580.1
ENST00000670150.1
CDS TCA 72 bp CTTCACATTCTTACACAACAGTGTCCAGCTGATTGTTaGGAGGTTAGGTCTTGTTTGACACCTCCCCATCCT +
Preference number: 6 (lower is better)
Translates to: LHILTQQCPADC*EVRSCLTPPHP
Trigger: AGGATGGGGAGGTGTCAAACAAGACCTAACCTCTCAACAATCAGCTGGACACTGTTGTGTAAGAATGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000655586.1
ENST00000656293.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS TCA 72 bp AAGATTTCTTCCAAACTCATTCACATGCCTTTTGGATaGCCTCAGGTCCTTGCTGGATCCCGGCTGAAAACA +
Preference number: 6 (lower is better)
Translates to: KISSKLIHMPFG*PQVLAGSRLKT
Trigger: TGTTTTCAGCCGGGATCCAGCAAGGACCTGAGGTCATCCAAAAGGCATGTGAATGAGTTTGGAAGAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS TCA 72 bp TGGAGTTCCGGAAGAGTCAATGCTGTAGTTCCAGTCTaGCTCCAAAGGCCTTTTTCTTTTTGTAGCCAAGTC +
Preference number: 6 (lower is better)
Translates to: WSSGRVNAVVPV*LQRPFSFCSQV
Trigger: GACTTGGCTACAAAAAGAAAAAGGCCTTTGGAGTCAGACTGGAACTACAGCATTGACTCTTCCGGAACTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000664292.1
CDS GCA 72 bp TGGTTTTCACGGTTATGGAGGCTAATTCCCACAATATaGTATCTGCATGCTAGACAGCCAGGAAAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: WFSRLWRLIPTI*YLHARQPGKLL
Trigger: CAACAGCTTTCCTGGCTGTCTAGCATGCAGATAGCATATTGTGGGAATTAGCCTCCATAACCGTGAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 72 bp TACTTTGTTTCTAAAGCAGTACTGTATTGCGGGATCTaGCCAGCAACCCGCAATGCAATGGGACTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: YFVSKAVLYCGI*PATRNAMGLFL
Trigger: AAGAAAGAGTCCCATTGCATTGCGGGTTGCTGGCCAGATCCCGCAATACAGTACTGCTTTAGAAACAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS CCA 72 bp ATCAGGTCTAAAAGAGTTAGTACCTGTGGTTTCCTGTaGTTTGCTTTGGCTCTCAGGTGCTTAGAGGTAGGA +
Preference number: 6 (lower is better)
Translates to: IRSKRVSTCGFL*FALALRCLEVG
Trigger: TCCTACCTCTAAGCACCTGAGAGCCAAAGCAAACCACAGGAAACCACAGGTACTAACTCTTTTAGACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000494915.2
ENST00000653864.1
ENST00000653967.1
ENST00000654261.1
ENST00000655586.1
ENST00000659430.1
ENST00000660780.1
ENST00000661151.1
ENST00000664927.1
ENST00000665369.1
ENST00000666398.1
ENST00000668542.1
ENST00000670998.1
CDS CCA 72 bp CTTTTTCCTGGGAAGAGATCACAATTATACCTGTTTTaGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: LFPGKRSQLYLF*LPSCVIPRQSQ
Trigger: CTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000654990.1
ENST00000657326.1
ENST00000665369.1
CDS CCA 72 bp GTTGTCTTCAGTCCTGAAAACAACCGCAGGGCATCATaGTTGTGGAAGCTGAAAAGTTCCAAGATCTGTAGT +
Preference number: 6 (lower is better)
Translates to: VVFSPENNRRAS*LWKLKSSKICS
Trigger: ACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS CAA 72 bp AGAAATGGAAATACTTATACAGTGAGTGATGCCTTGTaGCAGCTGCTTCGCGAGTCCAGAAACCCATCTCTG +
Preference number: 6 (lower is better)
Translates to: RNGNTYTVSDAL*QLLRESRNPSL
Trigger: CAGAGATGGGTTTCTGGACTCGCGAAGCAGCTGCAACAAGGCATCACTCACTGTATAAGTATTTCCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000470138.5
ENST00000498616.6
ENST00000653747.1
ENST00000653773.1
ENST00000653864.1
ENST00000653967.1
ENST00000654261.1
ENST00000654990.1
ENST00000655586.1
ENST00000656293.1
ENST00000660780.1
ENST00000661151.1
ENST00000664927.1
ENST00000665369.1
ENST00000666398.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670998.1
CDS CAA 72 bp CTCAGAAATGGAAATACTTATACAGTGAGTGATGCCTaGTTGCAGCTGCTTCGCGAGTCCAGAAACCCATCT +
Preference number: 6 (lower is better)
Translates to: LRNGNTYTVSDA*LQLLRESRNPS
Trigger: AGATGGGTTTCTGGACTCGCGAAGCAGCTGCAACAAGGCATCACTCACTGTATAAGTATTTCCATTTCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 25 transcripts:
ENST00000470138.5
ENST00000494915.2
ENST00000498616.6
ENST00000653747.1
ENST00000653773.1
ENST00000653864.1
ENST00000653967.1
ENST00000654261.1
ENST00000654990.1
ENST00000655586.1
ENST00000656293.1
ENST00000659430.1
ENST00000660780.1
ENST00000661151.1
ENST00000664927.1
ENST00000665240.1
ENST00000665369.1
ENST00000666398.1
ENST00000668542.1
ENST00000670150.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670918.1
ENST00000670998.1
CDS CAA 72 bp GAAGAGATCACAATTATACCTGTTTTGGCTCCCAAGTaGTGTGATCCCAAGACAGAGCCAGGTGGGTACATA +
Preference number: 6 (lower is better)
Translates to: EEITIIPVLAPK*CDPKTEPGGYI
Trigger: TATGTACCCACCTGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000654990.1
ENST00000657326.1
ENST00000665369.1
CDS CAA 72 bp CTTGAAAGTCTTGAGGCATACTGGGCAGGTGTCCTGTaGAAAGTCTCCAATGGATCTGTGTTGTTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: LESLEAYWAGVL*KVSNGSVLFFS
Trigger: GGAGAAAAACAACACAGATCCATTGGAGACTTTCAACAGGACACCTGCCCAGTATGCCTCAAGACTTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000657326.1
ENST00000665369.1
CDS CAA 72 bp CTGGTTCTCTTTGTCTTCTCTGCCATCATTAGGATGTaGGCTTCTAACCTCAGGTTTTACCCTTCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: LVLFVFSAIIRM*ASNLRFYPSWN
Trigger: GTTCCAGGAAGGGTAAAACCTGAGGTTAGAAGCCAACATCCTAATGATGGCAGAGAAGACAAAGAGAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000655586.1
ENST00000656293.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS CAA 72 bp CCTTTTTCCTGGGAAGAGATCACAATTATACCTGTTTaGGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: PFSWEEITIIPV*APKLCDPKTEP
Trigger: TGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS CAA 90 bp CAATTCTCAGGTGTGGGCATTGATTCTAACCAGTCATTCCCTTCCTaGACTAGCATCAGGATCACTCGGAATAAGACCTCTTCATATGCT +
Preference number: 6 (lower is better)
Translates to: QFSGVGIDSNQSFPS*TSIRITRNKTSSYA
Trigger: AGCATATGAAGAGGTCTTATTCCGAGTGATCCTGATGCTAGTCAAGGAAGGGAATGACTGGTTAGAATCAATGCCCACACCTGAGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496693.1
ENST00000651449.1
CDS TCA 72 bp TGCAAAGATACATCGTGGAGCTGTTGTCTTCAGTCCTaGAAACAACCGCAGGGCATCCTTATTTCACAAGTT +
Preference number: 6 (lower is better)
Translates to: CKDTSWSCCLQS*KQPQGILISQV
Trigger: AACTTGTGAAATAAGGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000653747.1
ENST00000653773.1
ENST00000653864.1
ENST00000654069.1
ENST00000654261.1
ENST00000654580.1
ENST00000661151.1
ENST00000661555.1
ENST00000664927.1
ENST00000665240.1
ENST00000666398.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670918.1
CDS TCA 72 bp CAGGCTGGTACTGAGGAGTGTTTTCAAGGAGTTTTGTaGTGTGATCTATCTTCAGGTCTTGCAGCCATAGAT +
Preference number: 6 (lower is better)
Translates to: QAGTEECFQGVL*CDLSSGLAAID
Trigger: ATCTATGGCTGCAAGACCTGAAGATAGATCACATCACAAAACTCCTTGAAAACACTCCTCAGTACCAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS TCA 72 bp CAAATTCATTCTTTCTCTCCCTTCTTGTTCTCTAGGTaGGGCCTCAAGGGATTAGATGACACTTGCCCATAC +
Preference number: 6 (lower is better)
Translates to: QIHSFSPFLFSR*GLKGLDDTCPY
Trigger: GTATGGGCAAGTGTCATCTAATCCCTTGAGGCCTCACCTAGAGAACAAGAAGGGAGAGAAAGAATGAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS TCA 72 bp TTGAAAGTCTTGAGGCATACTGGGCAGGTGTCCTGTTaGAAGTCTCCAATGGATCTGTGTTGTTTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: LKVLRHTGQVSC*KSPMDLCCFSP
Trigger: AGGAGAAAAACAACACAGATCCATTGGAGACTTTCAACAGGACACCTGCCCAGTATGCCTCAAGACTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000657326.1
ENST00000665369.1
CDS TCA 72 bp GTCCTTGCTGGATCCCGGCTGAAAACATCAGTTCTTTaGCATGTGTGCACCTTAAAACACTGTAGCTTGATT +
Preference number: 6 (lower is better)
Translates to: VLAGSRLKTSVL*HVCTLKHCSLI
Trigger: AATCAAGCTACAGTGTTTTAAGGTGCACACATGTCAAAGAACTGATGTTTTCAGCCGGGATCCAGCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660780.1
ENST00000670998.1
CDS GCA 72 bp CTCAGTGGAAGTTGCAGATTAGTCCTGCCTCCGATCTaGCATCATGATTTTCTCTACTTCCAGAGTAACATA +
Preference number: 6 (lower is better)
Translates to: LSGSCRLVLPPI*HHDFLYFQSNI
Trigger: TATGTTACTCTGGAAGTAGAGAAAATCATGATGGCAGATCGGAGGCAGGACTAATCTGCAACTTCCACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000652830.1
ENST00000666398.1
ENST00000670150.1
CDS CCA 72 bp AAGACCAGCTTGGGCAACAAGGTGAAACCCCTTATATaGTTGTGGAAGCTGAAAAGTTCCAAGATCTGTAGT +
Preference number: 6 (lower is better)
Translates to: KTSLGNKVKPLI*LWKLKSSKICS
Trigger: ACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATATAAGGGGTTTCACCTTGTTGCCCAAGCTGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470138.5
CDS CCA 72 bp TTTCTGGTTCCTTCTTATTTGGGTAGACTATGTCGATaGGAAGCTCTGGGATTCAAGGTCTGCTGTTCAGAT +
Preference number: 6 (lower is better)
Translates to: FLVPSYLGRLCR*EALGFKVCCSD
Trigger: ATCTGAACAGCAGACCTTGAATCCCAGAGCTTCCCATCGACATAGTCTACCCAAATAAGAAGGAACCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CAA 72 bp AAGTGTATTCTTATGCAAAGATACATCGTGGAGCTGTaGTCTTCAGTCCTGAAAACAACCGCAGGGCATCCT +
Preference number: 6 (lower is better)
Translates to: KCILMQRYIVEL*SSVLKTTAGHP
Trigger: AGGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCATAAGAATACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000653747.1
ENST00000653773.1
ENST00000653864.1
ENST00000654069.1
ENST00000654261.1
ENST00000654580.1
ENST00000661151.1
ENST00000661555.1
ENST00000664927.1
ENST00000665240.1
ENST00000666398.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670918.1
CDS CAA 72 bp TCTTTTTCCTGGGAAGAGATCACAATTATACCTGTTTaGGCTCCCAAGTTGTGTGATCCCAAGACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SFSWEEITIIPV*APKLCDPKTEP
Trigger: TGGCTCTGTCTTGGGATCACACAACTTGGGAGCCAAAACAGGTATAATTGTGATCTCTTCCCAGGAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS CAA 72 bp AAGTCCTTCAGGGTCTTAAGACTCTTAGGAAAACAGTaGCTTTGCCTTCTGGCATTCAGCCTGTCATTTTCC +
Preference number: 6 (lower is better)
Translates to: KSFRVLRLLGKQ*LCLLAFSLSFS
Trigger: GGAAAATGACAGGCTGAATGCCAGAAGGCAAAGCAACTGTTTTCCTAAGAGTCTTAAGACCCTGAAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS CAA 90 bp AAGTTACATTCACCATTATATGCATTCTCTCCTAGCTGCTGGTGGTaGCTGGCAATCCTTGGTGTTCCTGGGCTTGTAGATACTTGTAAA +
Preference number: 6 (lower is better)
Translates to: KLHSPLYAFSPSCWW*LAILGVPGLVDTCK
Trigger: TTTACAAGTATCTACAAGCCCAGGAACACCAAGGATTGCCAGCAACCACCAGCAGCTAGGAGAGAATGCATATAATGGTGAATGTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS TCA 72 bp TGCAGACCAGAGCTGTTCCTATTTGGCCATCTGAGGTaGATTCATTTTCAGTTTGGGTGCCAAGACATTATT +
Preference number: 6 (lower is better)
Translates to: CRPELFLFGHLR*IHFQFGCQDII
Trigger: AATAATGTCTTGGCACCCAAACTGAAAATGAATTCACCTCAGATGGCCAAATAGGAACAGCTCTGGTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS TCA 72 bp CTAGAGAAGAATATCGTGGTTGATAAGGCCATTTTGTaGGCCAGGACAACTGAGTTCAGACACCACAGTTTA +
Preference number: 6 (lower is better)
Translates to: LEKNIVVDKAIL*ARTTEFRHHSL
Trigger: TAAACTGTGGTGTCTGAACTCAGTTGTCCTGGCTCACAAAATGGCCTTATCAACCACGATATTCTTCTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666522.1
CDS GCA 72 bp ATTCTAAAAGATTGCCAGTTACTCCAGTACTCACCATaGCAGACTGTATTTGGGAGACACTTCATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: ILKDCQLLQYSP*QTVFGRHFIRS
Trigger: AGACCTGATGAAGTGTCTCCCAAATACAGTCTGGCATGGTGAGTACTGGAGTAACTGGCAATCTTTTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000653967.1
CDS CCA 72 bp GATTATGATTATGATTTTTGTCTTCAGCTACCAGGATaGGTAGAGACAGATCACCAAGTGGGGGCAGAGATA +
Preference number: 6 (lower is better)
Translates to: DYDYDFCLQLPG*VETDHQVGAEI
Trigger: TATCTCTGCCCCCACTTGGTGATCTGTCTCTACCCATCCTGGTAGCTGAAGACAAAAATCATAATCATAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CAA 72 bp GACTTCTTCCTTGCATATCTTCCCATGACCTTATGGTaGTGGAAGCTGAAAAGTTCCAAGATCTGTAGTCAG +
Preference number: 6 (lower is better)
Translates to: DFFLAYLPMTLW*WKLKSSKICSQ
Trigger: CTGACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATAAGGTCATGGGAAGATATGCAAGGAAGAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CAA 72 bp AAGTGTATTCTTATGCAAAGATACATCGTGGAGCTGTaGTCTTCAGTCCTGAAAACAACCGCAGGGCATCAT +
Preference number: 6 (lower is better)
Translates to: KCILMQRYIVEL*SSVLKTTAGHH
Trigger: ATGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCATAAGAATACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS TCA 72 bp TGGAATATGCTTGGCTTTCATTATGGTTGTGGAAGCTaGAAAGTTCCAAGATCTGTAGTCAGTAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: WNMLGFHYGCGS*KVPRSVVSKLE
Trigger: CTCCAGCTTACTGACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATAATGAAAGCCAAGCATATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000498616.6
ENST00000653747.1
ENST00000653773.1
ENST00000653864.1
ENST00000654261.1
ENST00000655586.1
ENST00000656293.1
ENST00000657326.1
ENST00000660780.1
ENST00000661419.1
ENST00000661555.1
ENST00000664927.1
ENST00000665240.1
ENST00000666398.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
CDS TCA 72 bp GCTACTCAGTCTACTGATTCAAATGCTGATCTCTTCTaGGGTGAATTCATTTTCAGTTTGGGTGCCAAGACA +
Preference number: 6 (lower is better)
Translates to: ATQSTDSNADLF*GEFIFSLGAKT
Trigger: TGTCTTGGCACCCAAACTGAAAATGAATTCACCTCAGAAGAGATCAGCATTTGAATCAGTAGACTGAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS GCA 72 bp CCACCTCCTGGGAGCACAGTATCTCCATATGTTATTTaGAATTCAGGCATATATATCTTGTTCCAGGATCAT +
Preference number: 6 (lower is better)
Translates to: PPPGSTVSPYVI*NSGIYILFQDH
Trigger: ATGATCCTGGAACAAGATATATATGCCTGAATTGCAAATAACATATGGAGATACTGTGCTCCCAGGAGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS CCA 72 bp ATGGACTTCTTCCTTGCATATCTTCCCATGACCTTATaGTTGTGGAAGCTGAAAAGTTCCAAGATCTGTAGT +
Preference number: 6 (lower is better)
Translates to: MDFFLAYLPMTL*LWKLKSSKICS
Trigger: ACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATAAGGTCATGGGAAGATATGCAAGGAAGAAGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CAA 90 bp TTATTATACAAGTGTATTCTTATGCAAAGATACATCGTGGAGCTGTaGTCTTCAGTCCTGAAAACAACCGCAGGGCATCATGGTTGTGGA +
Preference number: 6 (lower is better)
Translates to: LLYKCILMQRYIVEL*SSVLKTTAGHHGCG
Trigger: TCCACAACCATGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCATAAGAATACACTTGTATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663897.1
CDS CAA 90 bp TTTGGTTTCAAGTGTATTCTTATGCAAAGATACATCGTGGAGCTGTaGTCTTCAGTCCTGAAAACAACCGCAGGGCATCCTTATTTCACA +
Preference number: 6 (lower is better)
Translates to: FGFKCILMQRYIVEL*SSVLKTTAGHPYFT
Trigger: TGTGAAATAAGGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCATAAGAATACACTTGAAACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666398.1
CDS CCA 72 bp TTGTTGCTGCCAGGTTACTGTGATTTTTGGCATCATTaGCATACAGCGATAGTTTGGCCAAATATTGTTTCT +
Preference number: 6 (lower is better)
Translates to: LLLPGYCDFWHH*HTAIVWPNIVS
Trigger: AGAAACAATATTTGGCCAAACTATCGCTGTATGCCAATGATGCCAAAAATCACAGTAACCTGGCAGCAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000494915.2
ENST00000653773.1
ENST00000653864.1
ENST00000653967.1
ENST00000656293.1
ENST00000670150.1
ENST00000670463.1
CDS CCA 72 bp GATGTGATTTGTTATGGAAACTGGTTTTCACGGTTATaGAGGCTAATTCCCACAATATGCTATCTGCATGCT +
Preference number: 6 (lower is better)
Translates to: DVICYGNWFSRL*RLIPTICYLHA
Trigger: AGCATGCAGATAGCATATTGTGGGAATTAGCCTCCATAACCGTGAAAACCAGTTTCCATAACAAATCACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CCA 72 bp GGTAACAAAGCGGAGAACATGTCAGTTAAGCTGCTTTaGTCTGAAATGAACATTAGACTCAACTTCAAATGG +
Preference number: 6 (lower is better)
Translates to: GNKAENMSVKLL*SEMNIRLNFKW
Trigger: CCATTTGAAGTTGAGTCTAATGTTCATTTCAGACCAAAGCAGCTTAACTGACATGTTCTCCGCTTTGTTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655586.1
ENST00000669761.1
CDS CAA 90 bp TCCCATATGTGCTCTATCTTGGTTTTAGGAAATGATGGAATATGCTaGGCTTTCATTATGGTTGTGGAAGCTGAAAAGTTCCAAGATCTG +
Preference number: 6 (lower is better)
Translates to: SHMCSILVLGNDGIC*AFIMVVEAEKFQDL
Trigger: CAGATCTTGGAACTTTTCAGCTTCCACAACCATAATGAAAGCCAAGCATATTCCATCATTTCCTAAAACCAAGATAGAGCACATATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000498616.6
ENST00000653747.1
ENST00000653773.1
ENST00000653864.1
ENST00000654261.1
ENST00000655586.1
ENST00000656293.1
ENST00000657326.1
ENST00000660780.1
ENST00000661419.1
ENST00000661555.1
ENST00000664927.1
ENST00000665240.1
ENST00000666398.1
ENST00000668542.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
CDS CAA 90 bp TTATTATACAAGTGTATTCTTATGCAAAGATACATCGTGGAGCTGTaGTCTTCAGTCCTGAAAACAACCGCAGGGCATCCTTATTTCACA +
Preference number: 6 (lower is better)
Translates to: LLYKCILMQRYIVEL*SSVLKTTAGHPYFT
Trigger: TGTGAAATAAGGATGCCCTGCGGTTGTTTTCAGGACTGAAGACAACAGCTCCACGATGTATCTTTGCATAAGAATACACTTGTATAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000653747.1
ENST00000653773.1
ENST00000653864.1
ENST00000654069.1
ENST00000654261.1
ENST00000654580.1
ENST00000661151.1
ENST00000661555.1
ENST00000664927.1
ENST00000665240.1
ENST00000670338.1
ENST00000670403.1
ENST00000670463.1
ENST00000670918.1
CDS CCA 72 bp CCTATTTGGCCATCTGAGGTGAATTCATTTTCAGTTTaGGTGCCAAGACATTATTTCAACAGGGAAAGAATA +
Preference number: 6 (lower is better)
Translates to: PIWPSEVNSFSV*VPRHYFNRERI
Trigger: TATTCTTTCCCTGTTGAAATAATGTCTTGGCACCCAAACTGAAAATGAATTCACCTCAGATGGCCAAATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496693.1
CDS CAA 72 bp TCTAACTCAACAATGTCATTTAGACTCTGGTTCTCTTaGTCTTCTCTGCCATCATTAGGATGTTGGCTTCTA +
Preference number: 6 (lower is better)
Translates to: SNSTMSFRLWFS*SSLPSLGCWLL
Trigger: TAGAAGCCAACATCCTAATGATGGCAGAGAAGACAAAGAGAACCAGAGTCTAAATGACATTGTTGAGTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000655586.1
ENST00000656293.1
ENST00000659430.1
ENST00000661419.1
ENST00000664292.1
ENST00000669761.1
CDS CAA 90 bp ACACATGCTTATAAAGGCGGCATATTTATGATAGATTATACCTCTTaGCCTTTTTGTTCCAGCTATTCCTCTCCATTTCCATTCCACTTC +
Preference number: 6 (lower is better)
Translates to: THAYKGGIFMIDYTS*PFCSSYSSPFPFHF
Trigger: GAAGTGGAATGGAAATGGAGAGGAATAGCTGGAACAAAAAGGCAAAGAGGTATAATCTATCATAAATATGCCGCCTTTATAAGCATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS TCA 72 bp CGGAGAACATGTCAGTTAAGCTGCTTTGGTCTGAAATaGACATTAGACTCAACTTCAAATGGCTTAAGTATA +
Preference number: 6 (lower is better)
Translates to: RRTCQLSCFGLK*TLDSTSNGLSI
Trigger: TATACTTAAGCCATTTGAAGTTGAGTCTAATGTTCATTTCAGACCAAAGCAGCTTAACTGACATGTTCTCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655586.1
ENST00000669761.1
CDS CCA 72 bp ATGCTGATCTCTTCTGAGGTGAATTCATTTTCAGTTTaGGTGCCAAGACATTATTTCAACAGGGAAAGAATA +
Preference number: 6 (lower is better)
Translates to: MLISSEVNSFSV*VPRHYFNRERI
Trigger: TATTCTTTCCCTGTTGAAATAATGTCTTGGCACCCAAACTGAAAATGAATTCACCTCAGAAGAGATCAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS CAA 72 bp GAGACTTATTTATTAGAAAGGAATTGGCTTACATGGTaGTGGAAGCTGAAAAGTTCCAAGATCTGTAGTCAG +
Preference number: 6 (lower is better)
Translates to: ETYLLERNWLTW*WKLKSSKICSQ
Trigger: CTGACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGTAAGCCAATTCCTTTCTAATAAATAAGTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494915.2
ENST00000666522.1
CDS CAA 72 bp GCAATTCAGAGATTTCATCTTAGTTTGGATCCATTCTaGGTGAGCTGGTATAATTTTCAGGGGGTATTAAAG +
Preference number: 6 (lower is better)
Translates to: AIQRFHLSLDPF*VSWYNFQGVLK
Trigger: CTTTAATACCCCCTGAAAATTATACCAGCTCACCAAGAATGGATCCAAACTAAGATGAAATCTCTGAATTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652830.1
CDS CAA 72 bp TGTCCACATGGAATCTGTGATGTTAACTTTCATCATTaGGTTGAGGTAGAATGTGCCAAGTTTCTTGTACTA +
Preference number: 6 (lower is better)
Translates to: CPHGICDVNFHH*VEVECAKFLVL
Trigger: TAGTACAAGAAACTTGGCACATTCTACCTCAACCAAATGATGAAAGTTAACATCACAGATTCCATGTGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000657326.1
ENST00000665369.1
CDS CAA 90 bp AGCACAGTATCTCCATATGTTATTTGCAATTCAGGCATATATATCTaGTTCCAGGATCATTACCTTTTTCCTGGGAAGAGATCACAATTA +
Preference number: 6 (lower is better)
Translates to: STVSPYVICNSGIYI*FQDHYLFPGKRSQL
Trigger: TAATTGTGATCTCTTCCCAGGAAAAAGGTAATGATCCTGGAACAAGATATATATGCCTGAATTGCAAATAACATATGGAGATACTGTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS TCA 72 bp AGAGGACTAATAGGATATATAGAGATGGAGAAGATGTaGTTTGTTATGGAAACTGGTTTTCACGGTTATGGA +
Preference number: 6 (lower is better)
Translates to: RGLIGYIEMEKM*FVMETGFHGYG
Trigger: TCCATAACCGTGAAAACCAGTTTCCATAACAAATCACATCTTCTCCATCTCTATATATCCTATTAGTCCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651449.1
CDS TCA 72 bp GTTTTTCTCCTGATTAGACCAGAATTATCAGTCATTTaGAATAATACCACAGAGGGAAATGCCTTTCTCATC +
Preference number: 6 (lower is better)
Translates to: VFLLIRPELSVI*NNTTEGNAFLI
Trigger: GATGAGAAAGGCATTTCCCTCTGTGGTATTATTTCAAATGACTGATAATTCTGGTCTAATCAGGAGAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000657326.1
ENST00000665369.1
CDS CCA 72 bp AGAGAGACTTATTTATTAGAAAGGAATTGGCTTACATaGTTGTGGAAGCTGAAAAGTTCCAAGATCTGTAGT +
Preference number: 6 (lower is better)
Translates to: RETYLLERNWLT*LWKLKSSKICS
Trigger: ACTACAGATCTTGGAACTTTTCAGCTTCCACAACCATGTAAGCCAATTCCTTTCTAATAAATAAGTCTCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494915.2
ENST00000666522.1
CDS CAA 72 bp TATAAAGGCGGCATATTTATGATAGATTATACCTCTTaGCCTTTTTGTTCCAGCTATTCCTCTCCATTTCCA +
Preference number: 6 (lower is better)
Translates to: YKGGIFMIDYTS*PFCSSYSSPFP
Trigger: TGGAAATGGAGAGGAATAGCTGGAACAAAAAGGCAAAGAGGTATAATCTATCATAAATATGCCGCCTTTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000654990.1
ENST00000665369.1
CDS CAA 72 bp TCTCCATATGTTATTTGCAATTCAGGCATATATATCTaGTTCCAGGATCATTACCTTTTTCCTGGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: SPYVICNSGIYI*FQDHYLFPGKR
Trigger: TCTCTTCCCAGGAAAAAGGTAATGATCCTGGAACAAGATATATATGCCTGAATTGCAAATAACATATGGAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657326.1
CDS CAA 72 bp TTATTAACAGTGAAAGCAGCCCCACATACATGTCCTTaGACAGTGGATCAAGATCATCATCTTCATATTAAA +
Preference number: 6 (lower is better)
Translates to: LLTVKAAPHTCP*TVDQDHHLHIK
Trigger: TTTAATATGAAGATGATGATCTTGATCCACTGTCAAAGGACATGTATGTGGGGCTGCTTTCACTGTTAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666522.1
CDS CAA 72 bp ACTAAATATTTCCCCAAGTGGAATCTGGGAGGAAATTaGGAGCATATATCAATGCTTTCAAGCAAATGGATT +
Preference number: 6 (lower is better)
Translates to: TKYFPKWNLGGN*EHISMLSSKWI
Trigger: AATCCATTTGCTTGAAAGCATTGATATATGCTCCAAATTTCCTCCCAGATTCCACTTGGGGAAATATTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670403.1
CDS GCA 72 bp TTAAATATACAGAACCTCTCTCCAGAGAGCTATAAATaGAGAAAACGTATCAATCTGTCAGAGATAGTTTCA +
Preference number: 6 (lower is better)
Translates to: LNIQNLSPESYK*RKRINLSEIVS
Trigger: TGAAACTATCTCTGACAGATTGATACGTTTTCTGCATTTATAGCTCTCTGGAGAGAGGTTCTGTATATTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000653747.1
ENST00000654261.1
ENST00000661151.1
ENST00000661555.1
ENST00000663897.1
ENST00000664927.1
ENST00000665240.1
ENST00000670338.1
ENST00000670403.1