Pregenerated sensors for LINC01320 (Homo sapiens)
Ensembl gene IDs: ENSG00000228262Ensembl transcript IDs: ENST00000366209.6, ENST00000422558.1, ENST00000423663.5, ENST00000442026.1, ENST00000453774.2, ENST00000587085.1, ENST00000603129.6, ENST00000604250.3, ENST00000607437.4, ENST00000616475.4, ENST00000621006.1, ENST00000625995.2, ENST00000626008.2, ENST00000626601.2, ENST00000626688.2, ENST00000627270.2, ENST00000627935.2, ENST00000628407.2, ENST00000630686.2, ENST00000650021.1, ENST00000654103.1, ENST00000658168.1, ENST00000659537.1, ENST00000661209.1, ENST00000664138.1, ENST00000664286.1, ENST00000664777.1, ENST00000665109.1, ENST00000666112.1, ENST00000666399.1, ENST00000667658.1, ENST00000671252.1, ENST00000671333.1, ENST00000671356.1
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGAGTGCTCTTTGGATCACGTCACTCAGGCTGGCCAGAGTCCCCTaGAGGGATGCTCCACAGGGCAGGCCTAAGCTGCCTAAGGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: RSALWITSLRLARVP*RDAPQGRPKLPKGL Trigger: TAGCCCCTTAGGCAGCTTAGGCCTGCCCTGTGGAGCATCCCTGCAGGGGACTCTGGCCAGCCTGAGTGACGTGATCCAAAGAGCACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423663.5 ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS CCA 90 bp | GCAATTTTCTACCCAGGAGTGCTCTTTGGATCACGTCACTCAGGCTaGCCAGAGTCCCCTGCAGGGATGCTCCACAGGGCAGGCCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: AIFYPGVLFGSRHSG*PESPAGMLHRAGLS Trigger: GCTTAGGCCTGCCCTGTGGAGCATCCCTGCAGGGGACTCTGGCCAGCCTGAGTGACGTGATCCAAAGAGCACTCCTGGGTAGAAAATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423663.5 ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS CCA 90 bp | GGTGAGGCGTTCCACCCAGGCAATTTTCTACCCAGGAGTGCTCTTTaGATCACGTCACTCAGGCTGGCCAGAGTCCCCTGCAGGGATGCT | + |
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Preference number: 5 (lower is better) Translates to: GEAFHPGNFLPRSAL*ITSLRLARVPCRDA Trigger: AGCATCCCTGCAGGGGACTCTGGCCAGCCTGAGTGACGTGATCCAAAGAGCACTCCTGGGTAGAAAATTGCCTGGGTGGAACGCCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423663.5 ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS CCA 90 bp | CGTGAACCCACCAGAGGGAGGAAACTCTGGATACGTAGTTCCACATaGCTGGGGAAGCCTGACAATCATGATGGAAGGCAAGGAGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: REPTRGRKLWIRSST*LGKPDNHDGRQGGA Trigger: TGCTCCTCCTTGCCTTCCATCATGATTGTCAGGCTTCCCCAGCCATGTGGAACTACGTATCCAGAGTTTCCTCCCTCTGGTGGGTTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667658.1 |
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| CDS CCA 90 bp | TCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTTGGGAGCTCTaGAAGCAAGGACCCCCGGTAACATTAGGGACAGTACTTGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SCHHLGSGPPPSWEL*KQGPPVTLGTVLEK Trigger: TTTCTCAAGTACTGTCCCTAATGTTACCGGGGGTCCTTGCTTCCAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621006.1 |
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| CDS CCA 90 bp | AGACCAAGAACCCCAGGTCAGAGAATACGACTCTTGCCACCATCTTaGAAGTGGCCCACCACCATCTTGGGAGCTTGGAATGTGAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: RPRTPGQRIRLLPPS*KWPTTILGAWNVRK Trigger: TTTCCTCACATTCCAAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAGTCGTATTCTCTGACCTGGGGTTCTTGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000603129.6 ENST00000616475.4 ENST00000626601.2 ENST00000627270.2 |
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| CDS GCA 90 bp | AGGGTTGTGATTGATTTCAGCAAGCAAGGAATACGTGACAGGGGCTaGATGCACCAGTGGTCAGAGAGAAACAGAACAGGGCAGGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: RVVIDFSKQGIRDRG*MHQWSERNRTGQGV Trigger: AACTCCCTGCCCTGTTCTGTTTCTCTCTGACCACTGGTGCATGCAGCCCCTGTCACGTATTCCTTGCTTGCTGAAATCAATCACAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658168.1 |
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| CDS GCA 90 bp | AGTTGTAGAAGGAAGGGCTTTATTCAGCTGGGAGGATCGGCAAGCTaGTGCCTTAAAATCCGAGCACCCCAAGTGCACAATTTCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SCRRKGFIQLGGSAS*CLKIRAPQVHNFCP Trigger: GGGACAGAAATTGTGCACTTGGGGTGCTCGGATTTTAAGGCAGCAGCTTGCCGATCCTCCCAGCTGAATAAAGCCCTTCCTTCTACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658168.1 ENST00000664777.1 |
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| CDS CCA 90 bp | GATTTCAGCAAGCAAGGAATACGTGACAGGGGCTGCATGCACCAGTaGTCAGAGAGAAACAGAACAGGGCAGGGAGTTTCACAGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DFSKQGIRDRGCMHQ*SERNRTGQGVSQCS Trigger: AGAACACTGTGAAACTCCCTGCCCTGTTCTGTTTCTCTCTGACCACTGGTGCATGCAGCCCCTGTCACGTATTCCTTGCTTGCTGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658168.1 |
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| CDS CCA 90 bp | AAACCTCTCAGACACCAAGTTGTAGAAGGAAGGGCTTTATTCAGCTaGGAGGATCGGCAAGCTGCTGCCTTAAAATCCGAGCACCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: KPLRHQVVEGRALFS*EDRQAAALKSEHPK Trigger: CTTGGGGTGCTCGGATTTTAAGGCAGCAGCTTGCCGATCCTCCCAGCTGAATAAAGCCCTTCCTTCTACAACTTGGTGTCTGAGAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS TCA 90 bp | CACCATCTTGGAAGTGGCCCACCACCATCTTGGGAGCTTGGAATGTaGGGAAAAGAGAAATGTGCATTTCCAGTCCTGGCCTGTGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: HHLGSGPPPSWELGM*GKEKCAFPVLACEN Trigger: GTTTTCACAGGCCAGGACTGGAAATGCACATTTCTCTTTTCCTCACATTCCAAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000603129.6 ENST00000616475.4 ENST00000626601.2 ENST00000627270.2 |
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| CDS GCA 90 bp | ACACGTGCACAGGTTATCCTTTGCAGCACTTCGGTCTTTATGTCTTaGAAATGTGCTCAGCACTCCTACATCCCATGGGTCTCAGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: TRAQVILCSTSVFMS*KCAQHSYIPWVSAS Trigger: TGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGGATAACCTGTGCACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
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| CDS TCA 90 bp | CTGTACAACTGCCCCAGACGCACTTTAGGAGTTATGCATCGGAGATaGCAGGTAACATGCCACCACATCACAGAACACAAATGTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LYNCPRRTLGVMHRR*QVTCHHITEHKCLG Trigger: CCCAAGACATTTGTGTTCTGTGATGTGGTGGCATGTTACCTGTCATCTCCGATGCATAACTCCTAAAGTGCGTCTGGGGCAGTTGTACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000423663.5 ENST00000453774.2 ENST00000603129.6 ENST00000604250.3 ENST00000607437.4 ENST00000616475.4 ENST00000625995.2 ENST00000626008.2 ENST00000626601.2 ENST00000626688.2 ENST00000627270.2 ENST00000627935.2 ENST00000628407.2 ENST00000630686.2 ENST00000650021.1 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 ENST00000665109.1 ENST00000671252.1 ENST00000671356.1 |
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| CDS TCA 90 bp | TGGAATGTGAGGAAAAGAGAAATGTGCATTTCCAGTCCTGGCCTGTaGAAACCTCCCCAGGCGTGCTCCTCCTTGTTTGTTTCCCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: WNVRKREMCISSPGL*KPPQACSSLFVSLS Trigger: TGAAAGGGAAACAAACAAGGAGGAGCACGCCTGGGGAGGTTTTCACAGGCCAGGACTGGAAATGCACATTTCTCTTTTCCTCACATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000603129.6 ENST00000626601.2 ENST00000627270.2 |
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| CDS TCA 90 bp | TGGAATGTGAGGAAAAGAGAAATGTGCATTTCCAGTCCTGGCCTGTaGAAACCTCCCCAGGCGTGCTCCTCCTTGTTTGTTTCCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: WNVRKREMCISSPGL*KPPQACSSLFVSLE Trigger: TTCAAGGGAAACAAACAAGGAGGAGCACGCCTGGGGAGGTTTTCACAGGCCAGGACTGGAAATGCACATTTCTCTTTTCCTCACATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000616475.4 |
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| CDS TCA 90 bp | AGCAAGGATCCACACCGACCTGTCTACCCAAGAGTAGTCTTTCTTTaGCTATTCAGGGACATGTGTCTTTGGTGGCCAAAGGTCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SKDPHRPVYPRVVFL*LFRDMCLWWPKVLC Trigger: GCAAAGGACCTTTGGCCACCAAAGACACATGTCCCTGAATAGTCAAAGAAAGACTACTCTTGGGTAGACAGGTCGGTGTGGATCCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654103.1 |
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| CDS CCA 90 bp | GAGATGACAGGTAACATGCCACCACATCACAGAACACAAATGTCTTaGGTCCACTCCTTGGATTCACTCTGGAGACTGATGTCGGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: EMTGNMPPHHRTQMS*VHSLDSLWRLMSAC Trigger: ACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGACATTTGTGTTCTGTGATGTGGTGGCATGTTACCTGTCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000423663.5 ENST00000453774.2 ENST00000604250.3 ENST00000607437.4 ENST00000616475.4 ENST00000625995.2 ENST00000626008.2 ENST00000626601.2 ENST00000626688.2 ENST00000627270.2 ENST00000627935.2 ENST00000628407.2 ENST00000630686.2 ENST00000650021.1 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 ENST00000665109.1 ENST00000671252.1 ENST00000671356.1 |
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| CDS CCA 90 bp | CATAACTGCTATTCCTTTCCTTTTGTGTCCAGAGTTGGTTCCTTCTaGGGGGTTCGTGGTCTCCTTGACTTCAAGAATGGAGCTGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: HNCYSFPFVSRVGSF*GVRGLLDFKNGAAD Trigger: GTCTGCAGCTCCATTCTTGAAGTCAAGGAGACCACGAACCCCCCAGAAGGAACCAACTCTGGACACAAAAGGAAAGGAATAGCAGTTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 |
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| CDS TCA 90 bp | GAACACAAATGTCTTGGGTCCACTCCTTGGATTCACTCTGGAGACTaGTGTCGGCTTGTCAATTCAAGTTTCAGATGTCCGGACTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: EHKCLGSTPWIHSGD*CRLVNSSFRCPDSK Trigger: CTTGGAGTCCGGACATCTGAAACTTGAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGACATTTGTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000423663.5 ENST00000607437.4 ENST00000616475.4 ENST00000627270.2 ENST00000628407.2 ENST00000630686.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS TCA 90 bp | GGAGCTCTGGAAGCAAGGACCCCCGGTAACATTAGGGACAGTACTTaGGAAATCTACCTTATGGCTGTGGTTCTGTGTTGTATTCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: GALEARTPGNIRDST*EIYLMAVVLCCILY Trigger: GTACAGAATACAACACAGAACCACAGCCATAAGGTAGATTTCTCAAGTACTGTCCCTAATGTTACCGGGGGTCCTTGCTTCCAGAGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621006.1 |
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| CDS TCA 90 bp | AAAATCTTGCTGTTCTGGGTTCAAGAAGGTCTGCAGCTTCACTCTTaGAGTCAGCAAGACCAGGAACCCACCAGGAGGAACAAACAACTC | + |
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Preference number: 5 (lower is better) Translates to: KILLFWVQEGLQLHS*SQQDQEPTRRNKQL Trigger: GAGTTGTTTGTTCCTCCTGGTGGGTTCCTGGTCTTGCTGACTTCAAGAGTGAAGCTGCAGACCTTCTTGAACCCAGAACAGCAAGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
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| CDS TCA 90 bp | AGCATGGCAGTGGGGTCCATGAGAATCTGGTCCTTCTCTTTGAAGTaGTTCACCTCTGTAATCTCCAAAAGTGGCAAGGTCATGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: SMAVGSMRIWSFSLK*FTSVISKSGKVMKV Trigger: CACTTTCATGACCTTGCCACTTTTGGAGATTACAGAGGTGAATCACTTCAAAGAGAAGGACCAGATTCTCATGGACCCCACTGCCATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650021.1 |
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| CDS TCA 90 bp | GAACACAAATGTCTTGGGTCCACTCCTTGGATTCACTCTGGAGACTaGTGTCGGCTTGTCAATTCGTATTCCAGGCACAATACTAACTGC | + |
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Preference number: 5 (lower is better) Translates to: EHKCLGSTPWIHSGD*CRLVNSYSRHNTNC Trigger: GCAGTTAGTATTGTGCCTGGAATACGAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGACATTTGTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650021.1 |
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| CDS TCA 90 bp | GTCTGGGTTGGGTTAAGGGGTAGTGACAGGAATGAAAATGATACCTaGAGAATGAGTAGACCAGAGTGGGAGTATGTCAAACAGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VWVGLRGSDRNENDT*RMSRPEWEYVKQVS Trigger: GCTGACCTGTTTGACATACTCCCACTCTGGTCTACTCATTCTTCAGGTATCATTTTCATTCCTGTCACTACCCCTTAACCCAACCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659537.1 |
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| CDS TCA 90 bp | GTCCCAGTGAAAGAAAGAGTAAACAATGAGGCCACTGATCTCCTTTaGGTCTCAGAGTTGGTTTTCTTGACCCCTTTGGTGAGACAATGG | + |
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Preference number: 5 (lower is better) Translates to: VPVKERVNNEATDLL*VSELVFLTPLVRQW Trigger: CCATTGTCTCACCAAAGGGGTCAAGAAAACCAACTCTGAGACTCAAAGGAGATCAGTGGCCTCATTGTTTACTCTTTCTTTCACTGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS GCA 90 bp | TCCAGGGTTGGTAAACTTCCCTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTCAATATTTAT | + |
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Preference number: 5 (lower is better) Translates to: SRVGKLPFGLYVLQM*SALLHPMGLSVNIY Trigger: ATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGGAAGTTTACCAACCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442026.1 |
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| CDS GCA 90 bp | GTCAGCAAGACCAGGAACCCACCAGGAGGAACAAACAACTCCGGATaGATTGCTTTTATGAACTGTAACAATCATAGTGAAGATCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: VSKTRNPPGGTNNSG*IAFMNCNNHSEDLQ Trigger: CTGCAGATCTTCACTATGATTGTTACAGTTCATAAAAGCAATGCATCCGGAGTTGTTTGTTCCTCCTGGTGGGTTCCTGGTCTTGCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 90 bp | GATATGGAGGGACCTGAAGGGCATATCTTCTTGTGTCTTTCTTACTaGTTCCTGAAACTGGTTTCCTGGCTTGAACAAAAGGAGAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: DMEGPEGHIFLCLSY*FLKLVSWLEQKEKG Trigger: ACCCTTCTCCTTTTGTTCAAGCCAGGAAACCAGTTTCAGGAACCAGTAAGAAAGACACAAGAAGATATGCCCTTCAGGTCCCTCCATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664777.1 |
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| CDS TCA 90 bp | AGGGACCTGAAGGGCATATCTTCTTGTGTCTTTCTTACTGGTTCCTaGAACTGGTTTCCTGGCTTGAACAAAAGGAGAAGGGTAATACAG | + |
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Preference number: 5 (lower is better) Translates to: RDLKGISSCVFLTGS*NWFPGLNKRRRVIQ Trigger: CTGTATTACCCTTCTCCTTTTGTTCAAGCCAGGAAACCAGTTTCAGGAACCAGTAAGAAAGACACAAGAAGATATGCCCTTCAGGTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664777.1 |
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| CDS TCA 90 bp | GGAACCCACCAGGAGGAACAAACAACTCCGGATGCATTGCTTTTATaGACTGTAACAATCATAGTGAAGATCTGCAGATTCACTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GTHQEEQTTPDALLL*TVTIIVKICRFTPG Trigger: TCCAGGAGTGAATCTGCAGATCTTCACTATGATTGTTACAGTTCATAAAAGCAATGCATCCGGAGTTGTTTGTTCCTCCTGGTGGGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
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| CDS GCA 90 bp | ACAGGTTATCCTTTGCAGCACTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTCAATATTTAT | + |
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Preference number: 5 (lower is better) Translates to: TGYPLQHFGLYVLQM*SALLHPMGLSVNIY Trigger: ATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGGATAACCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
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| CDS CCA 90 bp | TCGGTCTTTATGTCTTGCAAATGTGCTCAGCACTCCTACATCCCATaGGTCTCAGCGTCAATATTTATGTGCTGGAATACTTCATTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SVFMSCKCAQHSYIP*VSASIFMCWNTSLP Trigger: AGGCAATGAAGTATTCCAGCACATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS GCA 90 bp | CTCTTTGAAGTGATTCACCTCTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTCAATATTTAT | + |
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Preference number: 5 (lower is better) Translates to: LFEVIHLFGLYVLQM*SALLHPMGLSVNIY Trigger: ATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGAGGTGAATCACTTCAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366209.6 |
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| CDS GCA 90 bp | ATTCCACTTGTACAAGGTACCTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTCAATATTTAT | + |
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Preference number: 5 (lower is better) Translates to: IPLVQGTFGLYVLQM*SALLHPMGLSVNIY Trigger: ATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTACCTTGTACAAGTGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS TCA 90 bp | TTTATGTGCTGGAATACTTCATTGCCTCATAAACCAGGAGGTAACTaGGTATTTTCACTCTCTGATGGTTGCATCACTCCAGCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FMCWNTSLPHKPGGN*VFSLSDGCITPASS Trigger: AGAAGAGGCTGGAGTGATGCAACCATCAGAGAGTGAAAATACTCAGTTACCTCCTGGTTTATGAGGCAATGAAGTATTCCAGCACATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS GCA 90 bp | TCCCATGGGTCTCAGCGTCAATATTTATGTGCTGGAATACTTCATTaGCTCATAAACCAGGAGGTAACTGAGTATTTTCACTCTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: SHGSQRQYLCAGILH*LINQEVTEYFHSLM Trigger: CATCAGAGAGTGAAAATACTCAGTTACCTCCTGGTTTATGAGGCAATGAAGTATTCCAGCACATAAATATTGACGCTGAGACCCATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 90 bp | CCGGTAACATTAGGGACAGTACTTGAGAAATCTACCTTATGGCTGTaGTTCTGTGTTGTATTCTGTACTTGCTTCTCTCTACCTTATGAC | + |
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Preference number: 5 (lower is better) Translates to: PVTLGTVLEKSTLWL*FCVVFCTCFSLPYD Trigger: GTCATAAGGTAGAGAGAAGCAAGTACAGAATACAACACAGAACCACAGCCATAAGGTAGATTTCTCAAGTACTGTCCCTAATGTTACCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621006.1 |
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| CDS GCA 90 bp | AGAGATGTAACTTCATTTACCTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTCAATATTTAT | + |
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Preference number: 5 (lower is better) Translates to: RDVTSFTFGLYVLQM*SALLHPMGLSVNIY Trigger: ATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTAAATGAAGTTACATCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666112.1 |
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| CDS CCA 90 bp | ACATGTGCATACCTACACACAATGTTTAACATCTACTGTACTGAATaGAGAGAGCAGCATATGAAAAGGGACTCAGCTCTGGTTGTCTAT | + |
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Preference number: 5 (lower is better) Translates to: TCAYLHTMFNIYCTE*REQHMKRDSALVVY Trigger: ATAGACAACCAGAGCTGAGTCCCTTTTCATATGCTGCTCTCTCCATTCAGTACAGTAGATGTTAAACATTGTGTGTAGGTATGCACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664777.1 |
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| CDS TCA 90 bp | ACACAATGTTTAACATCTACTGTACTGAATGGAGAGAGCAGCATATaGAAAGGGACTCAGCTCTGGTTGTCTATATACAAACTGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: TQCLTSTVLNGESSI*KGTQLWLSIYKLMR Trigger: CCTCATCAGTTTGTATATAGACAACCAGAGCTGAGTCCCTTTTCATATGCTGCTCTCTCCATTCAGTACAGTAGATGTTAAACATTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664777.1 |
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| CDS GCA 90 bp | TCAAATAATTTATTCTATACTGATACACGTGCACAGGTTATCCTTTaGAGCACTTCGGTCTTTATGTCTTGCAAATGTGCTCAGCACTCC | + |
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Preference number: 5 (lower is better) Translates to: SNNLFYTDTRAQVIL*STSVFMSCKCAQHS Trigger: GGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGGATAACCTGTGCACGTGTATCAGTATAGAATAAATTATTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
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| CDS CCA 90 bp | CATATCTTCTTGTGTCTTTCTTACTGGTTCCTGAAACTGGTTTCCTaGCTTGAACAAAAGGAGAAGGGTAATACAGTAATTAGCGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HIFLCLSYWFLKLVS*LEQKEKGNTVISEV Trigger: GACTTCGCTAATTACTGTATTACCCTTCTCCTTTTGTTCAAGCCAGGAAACCAGTTTCAGGAACCAGTAAGAAAGACACAAGAAGATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664777.1 |
||
| CDS TCA 90 bp | ATGAGGTCACACAGCAAAAGTATACACAATCAAGTACATTTTCTGTaGTTCTTAATCCTCTGCTCTAAGGCTATTTGTGAAGGCAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: MRSHSKSIHNQVHFL*FLILCSKAICEGNP Trigger: AGGGTTGCCTTCACAAATAGCCTTAGAGCAGAGGATTAAGAATCACAGAAAATGTACTTGATTGTGTATACTTTTGCTGTGTGACCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664777.1 |
||
| CDS GCA 90 bp | GAGAAATCTACCTTATGGCTGTGGTTCTGTGTTGTATTCTGTACTTaGTTCTCTCTACCTTATGACTTAAATGAACTAACCTTGAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EKSTLWLWFCVVFCT*FSLPYDLNELTLKA Trigger: TGCTTTCAAGGTTAGTTCATTTAAGTCATAAGGTAGAGAGAAGCAAGTACAGAATACAACACAGAACCACAGCCATAAGGTAGATTTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621006.1 |
||
| CDS GCA 90 bp | AGAAACTTCTGTGAGAGTCTCTCTAAGATAAAAACATTTCGTCTCTaGATTATTGATTGCCTACCATGGTTCTCATATCACATGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RNFCESLSKIKTFRL*IIDCLPWFSYHMMY Trigger: GTACATCATGTGATATGAGAACCATGGTAGGCAATCAATAATGCAGAGACGAAATGTTTTTATCTTAGAGAGACTCTCACAGAAGTTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659537.1 |
||
| CDS GCA 72 bp | TCCCCTGCAGGGATGCTCCACAGGGCAGGCCTAAGCTaGCTAAGGGGCTACCTCGGCCATCCCTCAGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: SPAGMLHRAGLS*LRGYLGHPSVT Trigger: GGTAACTGAGGGATGGCCGAGGTAGCCCCTTAGGCAGCTTAGGCCTGCCCTGTGGAGCATCCCTGCAGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423663.5 ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS CCA 72 bp | TACCCAGGAGTGCTCTTTGGATCACGTCACTCAGGCTaGCCAGAGTCCCCTGCAGGGATGCTCCACAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YPGVLFGSRHSG*PESPAGMLHRA Trigger: TGCCCTGTGGAGCATCCCTGCAGGGGACTCTGGCCAGCCTGAGTGACGTGATCCAAAGAGCACTCCTGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000423663.5 ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
||
| CDS CCA 72 bp | CACGGCACCCAAGTGGGTTGCCACTGCCGGCTGGGGTaGCCAGTTTTATTCCCTTATTTGTCCCTTCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: HGTQVGCHCRLG*PVLFPYLSLPM Trigger: CATGGGAAGGGACAAATAAGGGAATAAAACTGGCCACCCCAGCCGGCAGTGGCAACCCACTTGGGTGCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664138.1 |
||
| CDS CCA 72 bp | CAGCGAGACCGTGAACCCACCAGAGGGAGGAAACTCTaGATACGTAGTTCCACATGGCTGGGGAAGCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QRDREPTRGRKL*IRSSTWLGKPD Trigger: GTCAGGCTTCCCCAGCCATGTGGAACTACGTATCCAGAGTTTCCTCCCTCTGGTGGGTTCACGGTCTCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667658.1 |
||
| CDS CCA 72 bp | TTCCACCCAGGCAATTTTCTACCCAGGAGTGCTCTTTaGATCACGTCACTCAGGCTGGCCAGAGTCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FHPGNFLPRSAL*ITSLRLARVPC Trigger: GCAGGGGACTCTGGCCAGCCTGAGTGACGTGATCCAAAGAGCACTCCTGGGTAGAAAATTGCCTGGGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423663.5 ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
||
| CDS CAA 72 bp | GTTCCACCCAGGCAATTTTCTACCCAGGAGTGCTCTTaGGATCACGTCACTCAGGCTGGCCAGAGTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPPRQFSTQECS*DHVTQAGQSPL Trigger: CAGGGGACTCTGGCCAGCCTGAGTGACGTGATCCAAAGAGCACTCCTGGGTAGAAAATTGCCTGGGTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423663.5 ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS CCA 72 bp | TTCTGCCTCAGCCTCCCAAGTAGAGTAGCTGGGACTTaGGACTACAGGCATGCACACCACACCCAGACAATT | + |
|
Preference number: 6 (lower is better) Translates to: FCLSLPSRVAGT*DYRHAHHTQTI Trigger: AATTGTCTGGGTGTGGTGTGCATGCCTGTAGTCCCAAGTCCCAGCTACTCTACTTGGGAGGCTGAGGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000650021.1 ENST00000659537.1 |
||
| CDS CAA 90 bp | GAGACCAAGAACCCCAGGTCAGAGAATACGACTCTTGCCACCATCTaGGAAGTGGCCCACCACCATCTTGGGAGCTTGGAATGTGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ETKNPRSENTTLATI*EVAHHHLGSLECEE Trigger: TTCCTCACATTCCAAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAGTCGTATTCTCTGACCTGGGGTTCTTGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000603129.6 ENST00000616475.4 ENST00000626601.2 ENST00000627270.2 |
||
| CDS TCA 72 bp | GGAAGTGGCCCACCACCATCTTGGGAGCTTGGAATGTaGGGAAAAGAGAAATGTGCATTTCCAGTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GSGPPPSWELGM*GKEKCAFPVLA Trigger: GGCCAGGACTGGAAATGCACATTTCTCTTTTCCTCACATTCCAAGCTCCCAAGATGGTGGTGGGCCACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000603129.6 ENST00000616475.4 ENST00000626601.2 ENST00000627270.2 |
||
| CDS GCA 72 bp | ATTTCAGCAAGCAAGGAATACGTGACAGGGGCTGCATaGACCAGTGGTCAGAGAGAAACAGAACAGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ISASKEYVTGAA*TSGQRETEQGR Trigger: CCTGCCCTGTTCTGTTTCTCTCTGACCACTGGTGCATGCAGCCCCTGTCACGTATTCCTTGCTTGCTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658168.1 |
||
| CDS CCA 72 bp | CAGCGAGACCGTGAACCCACCAGAGGGAGGAAACTCTaGATACGTCTGCAAATGTGGCAGTGCTGGATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QRDREPTRGRKL*IRLQMWQCWIL Trigger: TAAAATCCAGCACTGCCACATTTGCAGACGTATCCAGAGTTTCCTCCCTCTGGTGGGTTCACGGTCTCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671333.1 |
||
| CDS CAA 72 bp | CTCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTaGGGAGCTCTTGAACCAGTTGTCATTTTAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: LLPPSWKWPTTI*GALEPVVILAP Trigger: GGGTGCTAAAATGACAACTGGTTCAAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628407.2 ENST00000664286.1 ENST00000671252.1 |
||
| CDS CAA 72 bp | GCTGTTCTGGGTTCAAGAAGGTCTGCAGCTTCACTCTaGAAGTCAGCAAGACCAGGAACCCACCAGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AVLGSRRSAASL*KSARPGTHQEE Trigger: TTCCTCCTGGTGGGTTCCTGGTCTTGCTGACTTCAAGAGTGAAGCTGCAGACCTTCTTGAACCCAGAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
||
| CDS GCA 72 bp | CCTTTGCAGCACTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PLQHFGLYVLQM*SALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
||
| CDS CCA 72 bp | TCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTTaGGAGCTCTCTAATACCAACCTGACAACGTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SCHHLGSGPPPS*ELSNTNLTTSL Trigger: TAGAGACGTTGTCAGGTTGGTATTAGAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626008.2 |
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| CDS CCA 72 bp | ACCAGAGGGAGGAAACTCTGGATACGTAGTTCCACATaGCTGGGGAAGCCTGACAATCATGATGGAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TRGRKLWIRSST*LGKPDNHDGRQ Trigger: TTGCCTTCCATCATGATTGTCAGGCTTCCCCAGCCATGTGGAACTACGTATCCAGAGTTTCCTCCCTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667658.1 |
||
| CDS CCA 72 bp | TGTAACAATCATAGTGAAGATCTGCAGATTCACTCCTaGAGTCAGCGAGACCGTGAACCCACCAGAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CNNHSEDLQIHS*SQRDREPTRGR Trigger: CCTCCCTCTGGTGGGTTCACGGTCTCGCTGACTCCAGGAGTGAATCTGCAGATCTTCACTATGATTGTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
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| CDS CAA 72 bp | TCTGACGCTTCTCCACATGGCGCAAGATTCCATTCCTaGGAATCCATGAGACCAAGAACCCCAGGTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SDASPHGARFHS*ESMRPRTPGQR Trigger: TCTCTGACCTGGGGTTCTTGGTCTCATGGATTCCAAGGAATGGAATCTTGCGCCATGTGGAGAAGCGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000453774.2 ENST00000603129.6 ENST00000616475.4 ENST00000621006.1 ENST00000626008.2 ENST00000626601.2 ENST00000627270.2 ENST00000658168.1 ENST00000664286.1 ENST00000665109.1 ENST00000671252.1 ENST00000671356.1 |
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| CDS CAA 72 bp | GCCTGTGAAAACCTCCCCAGGCGTGCTCCTCCTTGTTaGTTTCCCTTTCAGTTGGAAGGAATGGAGATGATC | + |
|
Preference number: 6 (lower is better) Translates to: ACENLPRRAPPC*FPFQLEGMEMI Trigger: GATCATCTCCATTCCTTCCAACTGAAAGGGAAACAAACAAGGAGGAGCACGCCTGGGGAGGTTTTCACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000603129.6 ENST00000626601.2 ENST00000627270.2 |
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| CDS CAA 72 bp | CTCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTaGGGAGCTTGGAATGTGAGGAAAAGAGAAATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPPSWKWPTTI*GAWNVRKREMC Trigger: GCACATTTCTCTTTTCCTCACATTCCAAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000603129.6 ENST00000616475.4 ENST00000626601.2 ENST00000627270.2 |
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| CDS CAA 90 bp | CTGATGTTCTCCAGGGTTGGTAAACTTCCCTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LMFSRVGKLPFGLYV*QMCSALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGGAAGTTTACCAACCCTGGAGAACATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442026.1 |
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| CDS CAA 90 bp | TACACGTGCACAGGTTATCCTTTGCAGCACTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: YTCTGYPLQHFGLYV*QMCSALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGGATAACCTGTGCACGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
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| CDS GCA 72 bp | GTGATTCACCTCTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VIHLFGLYVLQM*SALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGAGGTGAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366209.6 |
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| CDS GCA 72 bp | GGTAAACTTCCCTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GKLPFGLYVLQM*SALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGGAAGTTTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442026.1 |
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| CDS GCA 72 bp | CCAGGGTTGGTAAACTTCCCTTCGGTCTTTATGTCTTaGAAATGTGCTCAGCACTCCTACATCCCATGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGLVNFPSVFMS*KCAQHSYIPWV Trigger: GACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGGAAGTTTACCAACCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442026.1 |
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| CDS GCA 72 bp | GTACAAGGTACCTTCGGTCTTTATGTCTTGCAAATGTaGTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VQGTFGLYVLQM*SALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTACCTTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 72 bp | AGACACCAAGTTGTAGAAGGAAGGGCTTTATTCAGCTaGGAGGATCGGCAAGCTGCTGCCTTAAAATCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RHQVVEGRALFS*EDRQAAALKSE Trigger: CTCGGATTTTAAGGCAGCAGCTTGCCGATCCTCCCAGCTGAATAAAGCCCTTCCTTCTACAACTTGGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000625995.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS CAA 72 bp | GTAAAGGGAATGGGCTTTGAGTGTCTGCTGGTAACATaGACCCACATGCTCTTGCAGTTGCTGCTTGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VKGMGFECLLVT*THMLLQLLLGR Trigger: TCTGCCAAGCAGCAACTGCAAGAGCATGTGGGTCAATGTTACCAGCAGACACTCAAAGCCCATTCCCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000423663.5 ENST00000604250.3 ENST00000607437.4 ENST00000626008.2 ENST00000627935.2 ENST00000630686.2 ENST00000650021.1 ENST00000659537.1 |
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| CDS CAA 72 bp | CTCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTaGGGAGCTCTTCCGCAGATTAGTTACATGAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPPSWKWPTTI*GALPQISYMKK Trigger: CTTTTTCATGTAACTAATCTGCGGAAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665109.1 |
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| CDS CAA 90 bp | GGTGTTGAAGTAAAGGGAATGGGCTTTGAGTGTCTGCTGGTAACATaGACCCACATGCTCTTGCAGTTGCTGCTTGGCAGAGATCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GVEVKGMGFECLLVT*THMLLQLLLGRDLS Trigger: AGAGAGATCTCTGCCAAGCAGCAACTGCAAGAGCATGTGGGTCAATGTTACCAGCAGACACTCAAAGCCCATTCCCTTTACTTCAACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000423663.5 ENST00000604250.3 ENST00000607437.4 ENST00000626008.2 ENST00000627935.2 ENST00000630686.2 ENST00000650021.1 ENST00000659537.1 |
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| CDS CAA 90 bp | GTCTTGGGTCCACTCCTTGGATTCACTCTGGAGACTGATGTCGGCTaGTCAATTCCTCACCCTCATAAATGTCAAGCTTCCGAAAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLGPLLGFTLETDVG*SIPHPHKCQASENP Trigger: AGGGTTTTCGGAAGCTTGACATTTATGAGGGTGAGGAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453774.2 ENST00000604250.3 ENST00000625995.2 ENST00000626008.2 ENST00000626601.2 ENST00000626688.2 |
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| CDS CAA 90 bp | GAGCAAGGATCCACACCGACCTGTCTACCCAAGAGTAGTCTTTCTTaGACTATTCAGGGACATGTGTCTTTGGTGGCCAAAGGTCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EQGSTPTCLPKSSLS*TIQGHVSLVAKGPL Trigger: CAAAGGACCTTTGGCCACCAAAGACACATGTCCCTGAATAGTCAAAGAAAGACTACTCTTGGGTAGACAGGTCGGTGTGGATCCTTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654103.1 |
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| CDS TCA 72 bp | TGTCTTGGGTCCACTCCTTGGATTCACTCTGGAGACTaGTGTCGGCTTGTCAATTCAAGTTTCAGATGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CLGSTPWIHSGD*CRLVNSSFRCP Trigger: CGGACATCTGAAACTTGAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000423663.5 ENST00000607437.4 ENST00000616475.4 ENST00000627270.2 ENST00000628407.2 ENST00000630686.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS TCA 72 bp | TGCCCCAGACGCACTTTAGGAGTTATGCATCGGAGATaGCAGGTAACATGCCACCACATCACAGAACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: CPRRTLGVMHRR*QVTCHHITEHK Trigger: TTTGTGTTCTGTGATGTGGTGGCATGTTACCTGTCATCTCCGATGCATAACTCCTAAAGTGCGTCTGGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 21 transcripts: ENST00000423663.5 ENST00000453774.2 ENST00000603129.6 ENST00000604250.3 ENST00000607437.4 ENST00000616475.4 ENST00000625995.2 ENST00000626008.2 ENST00000626601.2 ENST00000626688.2 ENST00000627270.2 ENST00000627935.2 ENST00000628407.2 ENST00000630686.2 ENST00000650021.1 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 ENST00000665109.1 ENST00000671252.1 ENST00000671356.1 |
||
| CDS TCA 72 bp | TGTCTTGGGTCCACTCCTTGGATTCACTCTGGAGACTaGTGTCGGCTTGTCAATTCGTATTCCAGGCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: CLGSTPWIHSGD*CRLVNSYSRHN Trigger: ATTGTGCCTGGAATACGAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650021.1 |
||
| CDS TCA 72 bp | CCACACCGACCTGTCTACCCAAGAGTAGTCTTTCTTTaGCTATTCAGGGACATGTGTCTTTGGTGGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PHRPVYPRVVFL*LFRDMCLWWPK Trigger: CTTTGGCCACCAAAGACACATGTCCCTGAATAGTCAAAGAAAGACTACTCTTGGGTAGACAGGTCGGTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654103.1 |
||
| CDS GCA 72 bp | CAGGTTATCCTTTGCAGCACTTCGGTCTTTATGTCTTaGAAATGTGCTCAGCACTCCTACATCCCATGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QVILCSTSVFMS*KCAQHSYIPWV Trigger: GACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGGATAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
||
| CDS CCA 72 bp | GGTAACATGCCACCACATCACAGAACACAAATGTCTTaGGTCCACTCCTTGGATTCACTCTGGAGACTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GNMPPHHRTQMS*VHSLDSLWRLM Trigger: CATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGACATTTGTGTTCTGTGATGTGGTGGCATGTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000423663.5 ENST00000453774.2 ENST00000603129.6 ENST00000604250.3 ENST00000607437.4 ENST00000616475.4 ENST00000625995.2 ENST00000626008.2 ENST00000626601.2 ENST00000626688.2 ENST00000627270.2 ENST00000627935.2 ENST00000628407.2 ENST00000630686.2 ENST00000650021.1 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 ENST00000665109.1 ENST00000671252.1 ENST00000671356.1 |
||
| CDS CCA 72 bp | AATCATGATGGAAGGCAAGGAGGAGCAAGTCATTTCTaGAGGCCAAGATCAAGGGGCCAGCATAAGCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: NHDGRQGGASHF*RPRSRGQHKHK Trigger: CTTATGCTTATGCTGGCCCCTTGATCTTGGCCTCCAGAAATGACTTGCTCCTCCTTGCCTTCCATCATGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667658.1 |
||
| CDS CAA 72 bp | CCACTCCTTGGATTCACTCTGGAGACTGATGTCGGCTaGTCAATTCAAGTTTCAGATGTCCGGACTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLLGFTLETDVG*SIQVSDVRTPS Trigger: ACTTGGAGTCCGGACATCTGAAACTTGAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000423663.5 ENST00000607437.4 ENST00000616475.4 ENST00000627270.2 ENST00000628407.2 ENST00000630686.2 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 |
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| CDS CAA 72 bp | CCACATCACAGAACACAAATGTCTTGGGTCCACTCCTaGGATTCACTCTGGAGACTGATGTCGGCTTGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PHHRTQMSWVHS*DSLWRLMSACQ Trigger: TTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGACATTTGTGTTCTGTGATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000423663.5 ENST00000453774.2 ENST00000604250.3 ENST00000607437.4 ENST00000616475.4 ENST00000625995.2 ENST00000626008.2 ENST00000626601.2 ENST00000626688.2 ENST00000627270.2 ENST00000627935.2 ENST00000628407.2 ENST00000630686.2 ENST00000650021.1 ENST00000658168.1 ENST00000664286.1 ENST00000664777.1 ENST00000665109.1 ENST00000671252.1 ENST00000671356.1 |
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| CDS CAA 72 bp | TTTGAGTGTCTGCTGGTAACATTGACCCACATGCTCTaGCAGTTGCTGCTTGGCAGAGATCTCTCTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FECLLVTLTHML*QLLLGRDLSLC Trigger: GCAAAGAGAGAGATCTCTGCCAAGCAGCAACTGCAAGAGCATGTGGGTCAATGTTACCAGCAGACACTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000423663.5 ENST00000604250.3 ENST00000607437.4 ENST00000626008.2 ENST00000627935.2 ENST00000630686.2 ENST00000650021.1 ENST00000659537.1 |
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| CDS CAA 72 bp | TCCAGGGTTGGTAAACTTCCCTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRVGKLPFGLYV*QMCSALLHPMG Trigger: ACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGGAAGTTTACCAACCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442026.1 |
||
| CDS CAA 72 bp | CCACTCCTTGGATTCACTCTGGAGACTGATGTCGGCTaGTCAATTCCTCACCCTCATAAATGTCAAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLLGFTLETDVG*SIPHPHKCQAS Trigger: GGAAGCTTGACATTTATGAGGGTGAGGAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000453774.2 ENST00000604250.3 ENST00000625995.2 ENST00000626008.2 ENST00000626601.2 ENST00000626688.2 |
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| CDS CAA 72 bp | CTTCTTCTTTGGACACATGGCGCAAGATTCCATTCCTaGGAATCCATGAGACCAAGAACCCCAGGTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLLWTHGARFHS*ESMRPRTPGQR Trigger: TCTCTGACCTGGGGTTCTTGGTCTCATGGATTCCAAGGAATGGAATCTTGCGCCATGTGTCCAAAGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000625995.2 ENST00000628407.2 |
||
| CDS CAA 90 bp | GGAATGGGCTTTGAGTGTCTGCTGGTAACATTGACCCACATGCTCTaGCAGTTGCTGCTTGGCAGAGATCTCTCTCTTTGCGGATTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GMGFECLLVTLTHML*QLLLGRDLSLCGFK Trigger: TTTAAATCCGCAAAGAGAGAGATCTCTGCCAAGCAGCAACTGCAAGAGCATGTGGGTCAATGTTACCAGCAGACACTCAAAGCCCATTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000423663.5 ENST00000604250.3 ENST00000607437.4 ENST00000626008.2 ENST00000627935.2 ENST00000630686.2 ENST00000650021.1 ENST00000659537.1 |
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| CDS CAA 90 bp | TCCTCTCTGTGTCTGTGTCTTCTGCCACTGGATTTAGGGCCCACTTaGGTAATCCAGGAGGACCTCAAGATTCTTCATTATACCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLCLCLLPLDLGPT*VIQEDLKILHYTSC Trigger: GCATGAGGTATAATGAAGAATCTTGAGGTCCTCCTGGATTACCAAAGTGGGCCCTAAATCCAGTGGCAGAAGACACAGACACAGAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000442026.1 ENST00000667658.1 ENST00000671333.1 |
||
| CDS CAA 90 bp | AGAATACGACTCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTaGGGAGCTTGGAATGTGAGGAAAAGAGAAATGTGCATTTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RIRLLPPSWKWPTTI*GAWNVRKREMCISS Trigger: ACTGGAAATGCACATTTCTCTTTTCCTCACATTCCAAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAGTCGTATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000603129.6 ENST00000616475.4 ENST00000626601.2 ENST00000627270.2 |
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| CDS CAA 90 bp | AGAATACGACTCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTaGGGAGCTCTTGAACCAGTTGTCATTTTAGCACCCAACAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RIRLLPPSWKWPTTI*GALEPVVILAPNSF Trigger: AAAACTGTTGGGTGCTAAAATGACAACTGGTTCAAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAGTCGTATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628407.2 ENST00000664286.1 ENST00000671252.1 |
||
| CDS CAA 90 bp | TTCTTCTTCCTTCTTCTTTGGACACATGGCGCAAGATTCCATTCCTaGGAATCCATGAGACCAAGAACCCCAGGTCAGAGAATACGACTC | + |
|
Preference number: 6 (lower is better) Translates to: FFFLLLWTHGARFHS*ESMRPRTPGQRIRL Trigger: GAGTCGTATTCTCTGACCTGGGGTTCTTGGTCTCATGGATTCCAAGGAATGGAATCTTGCGCCATGTGTCCAAAGAAGAAGGAAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000625995.2 ENST00000628407.2 |
||
| CDS CAA 90 bp | AGAATACGACTCTTGCCACCATCTTGGAAGTGGCCCACCACCATCTaGGGAGCTCTTCCGCAGATTAGTTACATGAAAAAGCTTGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RIRLLPPSWKWPTTI*GALPQISYMKKLVE Trigger: TTCAACAAGCTTTTTCATGTAACTAATCTGCGGAAGAGCTCCCAAGATGGTGGTGGGCCACTTCCAAGATGGTGGCAAGAGTCGTATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665109.1 |
||
| CDS CAA 90 bp | GTCTTGGGTCCACTCCTTGGATTCACTCTGGAGACTGATGTCGGCTaGTCAATTATATTCCACCTTAAAGAGGATTTAATAGGCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VLGPLLGFTLETDVG*SIIFHLKEDLIGQA Trigger: CGCCTGGCCTATTAAATCCTCTTTAAGGTGGAATATAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGGACCCAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000671252.1 ENST00000671356.1 |
||
| CDS TCA 72 bp | GAAGCAAGGACCCCCGGTAACATTAGGGACAGTACTTaGGAAATCTACCTTATGGCTGTGGTTCTGTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: EARTPGNIRDST*EIYLMAVVLCC Trigger: ACAACACAGAACCACAGCCATAAGGTAGATTTCTCAAGTACTGTCCCTAATGTTACCGGGGGTCCTTGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621006.1 |
||
| CDS TCA 72 bp | GTGGGGTCCATGAGAATCTGGTCCTTCTCTTTGAAGTaGTTCACCTCTGTAATCTCCAAAAGTGGCAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGSMRIWSFSLK*FTSVISKSGKV Trigger: GACCTTGCCACTTTTGGAGATTACAGAGGTGAATCACTTCAAAGAGAAGGACCAGATTCTCATGGACCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650021.1 |
||
| CDS TCA 72 bp | TATCTACATTCCCTGCTGAGCTGCCTCTGGATTACATaGTTCCAATCCCTGACCACAACTGATTGGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: YLHSLLSCLWIT*FQSLTTTDWTE Trigger: CTCAGTCCAATCAGTTGTGGTCAGGGATTGGAATCATGTAATCCAGAGGCAGCTCAGCAGGGAATGTAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654103.1 |
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| CDS GCA 72 bp | GGAATTTGTACTTCCTGTAACTATAACTTTAAGCTCTaGTGGAGGGGGTCCTGGTATCCAGGGGGAATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GICTSCNYNFKL*WRGSWYPGGIP Trigger: TGGAATTCCCCCTGGATACCAGGACCCCCTCCAGCAGAGCTTAAAGTTATAGTTACAGGAAGTACAAATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 16 transcripts: ENST00000453774.2 ENST00000587085.1 ENST00000603129.6 ENST00000616475.4 ENST00000625995.2 ENST00000626601.2 ENST00000626688.2 ENST00000627270.2 ENST00000628407.2 ENST00000630686.2 ENST00000658168.1 ENST00000664286.1 ENST00000665109.1 ENST00000666399.1 ENST00000671252.1 ENST00000671356.1 |
||
| CDS GCA 72 bp | TTCCACTTGTACAAGGTACCTTCGGTCTTTATGTCTTaGAAATGTGCTCAGCACTCCTACATCCCATGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FHLYKVPSVFMS*KCAQHSYIPWV Trigger: GACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTACCTTGTACAAGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 72 bp | TATTCCTTTCCTTTTGTGTCCAGAGTTGGTTCCTTCTaGGGGGTTCGTGGTCTCCTTGACTTCAAGAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: YSFPFVSRVGSF*GVRGLLDFKNG Trigger: TCCATTCTTGAAGTCAAGGAGACCACGAACCCCCCAGAAGGAACCAACTCTGGACACAAAAGGAAAGGAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 |
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| CDS CAA 72 bp | TCCACACCGACCTGTCTACCCAAGAGTAGTCTTTCTTaGACTATTCAGGGACATGTGTCTTTGGTGGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: STPTCLPKSSLS*TIQGHVSLVAK Trigger: TTTGGCCACCAAAGACACATGTCCCTGAATAGTCAAAGAAAGACTACTCTTGGGTAGACAGGTCGGTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654103.1 |
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| CDS CAA 72 bp | ACAGGTTATCCTTTGCAGCACTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGYPLQHFGLYV*QMCSALLHPMG Trigger: ACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGGATAACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
||
| CDS CAA 90 bp | TCCTCTCTGTGTCTGTGTCTTCTGCCACTGGATTTAGGGCCCACTTaGGTAATCCAGGAGGACCTCAAGATTCTTCATTATACATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLCLCLLPLDLGPT*VIQEDLKILHYTFL Trigger: CAGAAATGTATAATGAAGAATCTTGAGGTCCTCCTGGATTACCAAAGTGGGCCCTAAATCCAGTGGCAGAAGACACAGACACAGAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366209.6 |
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| CDS CAA 90 bp | TCCTCTCTGTGTCTGTGTCTTCTGCCACTGGATTTAGGGCCCACTTaGGTAATCCAGGAGGACCTCAAGATTCTTCATTATACTGTATAC | + |
|
Preference number: 6 (lower is better) Translates to: SSLCLCLLPLDLGPT*VIQEDLKILHYTVY Trigger: GTATACAGTATAATGAAGAATCTTGAGGTCCTCCTGGATTACCAAAGTGGGCCCTAAATCCAGTGGCAGAAGACACAGACACAGAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 |
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| CDS CAA 90 bp | ATTGTAATGATTCCACTTGTACAAGGTACCTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: IVMIPLVQGTFGLYV*QMCSALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTACCTTGTACAAGTGGAATCATTACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS GCA 72 bp | GACTCCCAGGACCTCAAAGTCCTGGACTGTAAACCTTaGAAGAGGCTGGAGAAAATTTACATCTGTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DSQDLKVLDCKP*KRLEKIYICFP Trigger: TGGAAAACAGATGTAAATTTTCTCCAGCCTCTTGCAAGGTTTACAGTCCAGGACTTTGAGGTCCTGGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000453774.2 ENST00000603129.6 ENST00000658168.1 ENST00000664286.1 ENST00000665109.1 ENST00000671252.1 |
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| CDS GCA 72 bp | TTCCTAAAATCTTGCTGTTCTGGGTTCAAGAAGGTCTaGAGCTTCACTCTTGAAGTCAGCAAGACCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FLKSCCSGFKKV*SFTLEVSKTRN Trigger: GTTCCTGGTCTTGCTGACTTCAAGAGTGAAGCTGCAGACCTTCTTGAACCCAGAACAGCAAGATTTTAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 72 bp | AGGAAACTCTGGATACGTCTGCAAATGTGGCAGTGCTaGATTTTAAATATAAGTCTGCCAGACCCCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RKLWIRLQMWQC*ILNISLPDPRD Trigger: GTCTCTGGGGTCTGGCAGACTTATATTTAAAATCCAGCACTGCCACATTTGCAGACGTATCCAGAGTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671333.1 |
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| CDS CAA 72 bp | CTCTTTGAAGTGATTCACCTCTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LFEVIHLFGLYV*QMCSALLHPMG Trigger: ACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGAGGTGAATCACTTCAAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366209.6 |
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| CDS CAA 72 bp | ATTCCACTTGTACAAGGTACCTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IPLVQGTFGLYV*QMCSALLHPMG Trigger: ACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTACCTTGTACAAGTGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CAA 90 bp | GAACCAAGCATTACAGATATGGAGGGACCTGAAGGGCATATCTTCTaGTGTCTTTCTTACTGGTTCCTGAAACTGGTTTCCTGGCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EPSITDMEGPEGHIF*CLSYWFLKLVSWLE Trigger: TTCAAGCCAGGAAACCAGTTTCAGGAACCAGTAAGAAAGACACAAGAAGATATGCCCTTCAGGTCCCTCCATATCTGTAATGCTTGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664777.1 |
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| CDS GCA 72 bp | TCCTACATCCCATGGGTCTCAGCGTCAATATTTATGTaGTGGAATACTTCATTGCCTCATAAACCAGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SYIPWVSASIFM*WNTSLPHKPGG Trigger: ACCTCCTGGTTTATGAGGCAATGAAGTATTCCAGCACATAAATATTGACGCTGAGACCCATGGGATGTAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 72 bp | ATGTCTTGCAAATGTGCTCAGCACTCCTACATCCCATaGGTCTCAGCGTCAATATTTATGTGCTGGAATACT | + |
|
Preference number: 6 (lower is better) Translates to: MSCKCAQHSYIP*VSASIFMCWNT Trigger: AGTATTCCAGCACATAAATATTGACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 72 bp | ATTTGTACTTCCTGTAACTATAACTTTAAGCTCTGCTaGAGGGGGTCCTGGTATCCAGGGGGAATTCCAATA | + |
|
Preference number: 6 (lower is better) Translates to: ICTSCNYNFKLC*RGSWYPGGIPI Trigger: TATTGGAATTCCCCCTGGATACCAGGACCCCCTCCAGCAGAGCTTAAAGTTATAGTTACAGGAAGTACAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 16 transcripts: ENST00000453774.2 ENST00000587085.1 ENST00000603129.6 ENST00000616475.4 ENST00000625995.2 ENST00000626601.2 ENST00000626688.2 ENST00000627270.2 ENST00000628407.2 ENST00000630686.2 ENST00000658168.1 ENST00000664286.1 ENST00000665109.1 ENST00000666399.1 ENST00000671252.1 ENST00000671356.1 |
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| CDS CCA 72 bp | AGCTGGTGGAAAGTACTAGACATTTTAGTGGGAAAGTaGGTCAGTATGATCAGCCCCTCTGTGTTTGCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SWWKVLDILVGK*VSMISPSVFAN Trigger: ATTAGCAAACACAGAGGGGCTGATCATACTGACCCACTTTCCCACTAAAATGTCTAGTACTTTCCACCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000453774.2 ENST00000603129.6 ENST00000658168.1 ENST00000664286.1 ENST00000665109.1 ENST00000671252.1 |
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| CDS CAA 72 bp | GCTTTTAAGGGAAAGGGGAACAGTGACTCTCACACATaGCTGGTACAAGCGGAAATCCAATGCATTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AFKGKGNSDSHT*LVQAEIQCILH Trigger: ATGAAGAATGCATTGGATTTCCGCTTGTACCAGCAATGTGTGAGAGTCACTGTTCCCCTTTCCCTTAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661209.1 |
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| CDS CAA 90 bp | TTTATAGGAAGAGATGTAACTTCATTTACCTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGTCTCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: FIGRDVTSFTFGLYV*QMCSALLHPMGLSV Trigger: GACGCTGAGACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTAAATGAAGTTACATCTCTTCCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666112.1 |
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| CDS CAA 90 bp | AGTCTCAGAGTTGGTTTTCTTGACCCCTTTGGTGAGACAATGGTCTaGAAAGTAGAGGCTTTGTGTTCTAGTTTCATTCATGCGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLRVGFLDPFGETMV*KVEALCSSFIHAQH Trigger: ATGCTGCGCATGAATGAAACTAGAACACAAAGCCTCTACTTTCAAGACCATTGTCTCACCAAAGGGGTCAAGAAAACCAACTCTGAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS TCA 72 bp | AAAGAAAGAGTAAACAATGAGGCCACTGATCTCCTTTaGGTCTCAGAGTTGGTTTTCTTGACCCCTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KERVNNEATDLL*VSELVFLTPLV Trigger: CACCAAAGGGGTCAAGAAAACCAACTCTGAGACTCAAAGGAGATCAGTGGCCTCATTGTTTACTCTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS TCA 72 bp | AAGGGCATATCTTCTTGTGTCTTTCTTACTGGTTCCTaGAACTGGTTTCCTGGCTTGAACAAAAGGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGISSCVFLTGS*NWFPGLNKRRR Trigger: CCTTCTCCTTTTGTTCAAGCCAGGAAACCAGTTTCAGGAACCAGTAAGAAAGACACAAGAAGATATGCCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664777.1 |
||
| CDS TCA 72 bp | CATGAAGGAACCAAGCATTACAGATATGGAGGGACCTaGAGGGCATATCTTCTTGTGTCTTTCTTACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HEGTKHYRYGGT*RAYLLVSFLLV Trigger: AACCAGTAAGAAAGACACAAGAAGATATGCCCTTCAGGTCCCTCCATATCTGTAATGCTTGGTTCCTTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664777.1 |
||
| CDS GCA 72 bp | CTTTTAAGGGAAAGGGGAACAGTGACTCTCACACATTaGTGGTACAAGCGGAAATCCAATGCATTCTTCATA | + |
|
Preference number: 6 (lower is better) Translates to: LLRERGTVTLTH*WYKRKSNAFFI Trigger: TATGAAGAATGCATTGGATTTCCGCTTGTACCAGCAATGTGTGAGAGTCACTGTTCCCCTTTCCCTTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661209.1 |
||
| CDS GCA 72 bp | ACCAGGAACCCACCAGGAGGAACAAACAACTCCGGATaGATTGCTTTTATGAACTGTAACAATCATAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TRNPPGGTNNSG*IAFMNCNNHSE Trigger: TTCACTATGATTGTTACAGTTCATAAAAGCAATGCATCCGGAGTTGTTTGTTCCTCCTGGTGGGTTCCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
||
| CDS CCA 72 bp | TACATCCCATGGGTCTCAGCGTCAATATTTATGTGCTaGAATACTTCATTGCCTCATAAACCAGGAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: YIPWVSASIFMC*NTSLPHKPGGN Trigger: GTTACCTCCTGGTTTATGAGGCAATGAAGTATTCCAGCACATAAATATTGACGCTGAGACCCATGGGATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 72 bp | TATTTCAAAAGGATGACTCCCAGGACCTCAAAGTCCTaGACTGTAAACCTTGCAAGAGGCTGGAGAAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: YFKRMTPRTSKS*TVNLARGWRKF Trigger: AAATTTTCTCCAGCCTCTTGCAAGGTTTACAGTCCAGGACTTTGAGGTCCTGGGAGTCATCCTTTTGAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000453774.2 ENST00000603129.6 ENST00000658168.1 ENST00000664286.1 ENST00000665109.1 ENST00000671252.1 |
||
| CDS CAA 72 bp | AGAGATGTAACTTCATTTACCTTCGGTCTTTATGTCTaGCAAATGTGCTCAGCACTCCTACATCCCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RDVTSFTFGLYV*QMCSALLHPMG Trigger: ACCCATGGGATGTAGGAGTGCTGAGCACATTTGCAAGACATAAAGACCGAAGGTAAATGAAGTTACATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666112.1 |
||
| CDS TCA 72 bp | TGGAATACTTCATTGCCTCATAAACCAGGAGGTAACTaGGTATTTTCACTCTCTGATGGTTGCATCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WNTSLPHKPGGN*VFSLSDGCITP Trigger: TGGAGTGATGCAACCATCAGAGAGTGAAAATACTCAGTTACCTCCTGGTTTATGAGGCAATGAAGTATTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS TCA 72 bp | AGAGTCATTCAGCAGAAGATACTGCGCTCATCAAAGTaGAGCCCATGGATAAGATGGCAAATAACAGAGATT | + |
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Preference number: 6 (lower is better) Translates to: RVIQQKILRSSK*SPWIRWQITEI Trigger: AATCTCTGTTATTTGCCATCTTATCCATGGGCTTCACTTTGATGAGCGCAGTATCTTCTGCTGAATGACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422558.1 ENST00000654103.1 |
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| CDS CCA 72 bp | TACCTACACACAATGTTTAACATCTACTGTACTGAATaGAGAGAGCAGCATATGAAAAGGGACTCAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: YLHTMFNIYCTE*REQHMKRDSAL Trigger: CAGAGCTGAGTCCCTTTTCATATGCTGCTCTCTCCATTCAGTACAGTAGATGTTAAACATTGTGTGTAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664777.1 |
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| CDS CAA 72 bp | GACCTCAGCACAACACAGTATTCCCATGTAACAAAATaGCATGTGTTCTCTAGATCAAGTTTCAGATGTCCG | + |
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Preference number: 6 (lower is better) Translates to: DLSTTQYSHVTK*HVFSRSSFRCP Trigger: CGGACATCTGAAACTTGATCTAGAGAACACATGCAATTTTGTTACATGGGAATACTGTGTTGTGCTGAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000626688.2 ENST00000627935.2 ENST00000665109.1 |
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| CDS CAA 72 bp | AGAACACGATGTTATTACTTGTGTTTCCACAGTGATTaGTTGGTTTTCCAGTGCAAGAGTGATCCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RTRCYYLCFHSD*LVFQCKSDPSF Trigger: GAAGGAGGGATCACTCTTGCACTGGAAAACCAACAAATCACTGTGGAAACACAAGTAATAACATCGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654103.1 |
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| CDS CAA 90 bp | CTACCCAAGAGTAGTCTTTCTTTGACTATTCAGGGACATGTGTCTTaGGTGGCCAAAGGTCCTTTGCTTGAGAACAAAGAAAAGTCAATT | + |
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Preference number: 6 (lower is better) Translates to: LPKSSLSLTIQGHVS*VAKGPLLENKEKSI Trigger: AATTGACTTTTCTTTGTTCTCAAGCAAAGGACCTTTGGCCACCAAAGACACATGTCCCTGAATAGTCAAAGAAAGACTACTCTTGGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654103.1 |
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| CDS TCA 72 bp | CAGGAGGAACAAACAACTCCGGATGCATTGCTTTTATaGACTGTAACAATCATAGTGAAGATCTGCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: QEEQTTPDALLL*TVTIIVKICRF Trigger: GAATCTGCAGATCTTCACTATGATTGTTACAGTTCATAAAAGCAATGCATCCGGAGTTGTTTGTTCCTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667658.1 ENST00000671333.1 |
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| CDS GCA 72 bp | TTATTCTATACTGATACACGTGCACAGGTTATCCTTTaGAGCACTTCGGTCTTTATGTCTTGCAAATGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LFYTDTRAQVIL*STSVFMSCKCA Trigger: AGCACATTTGCAAGACATAAAGACCGAAGTGCTGCAAAGGATAACCTGTGCACGTGTATCAGTATAGAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661209.1 |
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| CDS CAA 72 bp | GTTGGTTTTCTTGACCCCTTTGGTGAGACAATGGTCTaGAAAGTAGAGGCTTTGTGTTCTAGTTTCATTCAT | + |
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Preference number: 6 (lower is better) Translates to: VGFLDPFGETMV*KVEALCSSFIH Trigger: ATGAATGAAACTAGAACACAAAGCCTCTACTTTCAAGACCATTGTCTCACCAAAGGGGTCAAGAAAACCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CAA 72 bp | CCACTCCTTGGATTCACTCTGGAGACTGATGTCGGCTaGTCAATTATATTCCACCTTAAAGAGGATTTAATA | + |
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Preference number: 6 (lower is better) Translates to: PLLGFTLETDVG*SIIFHLKEDLI Trigger: TATTAAATCCTCTTTAAGGTGGAATATAATTGACAAGCCGACATCAGTCTCCAGAGTGAATCCAAGGAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000671252.1 ENST00000671356.1 |
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| CDS CAA 90 bp | AAGTTTAGTCAAGTTTTGATCAGGGTTCACAGAATAACTGATTTATaGTCATTGGATCCCATACCATGTCACCTTGGATCAAAGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KFSQVLIRVHRITDL*SLDPIPCHLGSKSS Trigger: GGAGCTCTTTGATCCAAGGTGACATGGTATGGGATCCAATGACAATAAATCAGTTATTCTGTGAACCCTGATCAAAACTTGACTAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453774.2 ENST00000603129.6 ENST00000658168.1 ENST00000664286.1 ENST00000665109.1 ENST00000671252.1 |
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| CDS GCA 72 bp | TCTCAGCGTCAATATTTATGTGCTGGAATACTTCATTaGCTCATAAACCAGGAGGTAACTGAGTATTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SQRQYLCAGILH*LINQEVTEYFH Trigger: GTGAAAATACTCAGTTACCTCCTGGTTTATGAGGCAATGAAGTATTCCAGCACATAAATATTGACGCTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000366209.6 ENST00000442026.1 ENST00000661209.1 ENST00000664138.1 ENST00000666112.1 ENST00000667658.1 ENST00000671333.1 |
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| CDS CCA 72 bp | TGCTGGTACAAGCGGAAATCCAATGCATTCTTCATATaGGGTAATCTGGCAATATCTGTTTTTAAAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: CWYKRKSNAFFI*GNLAISVFKMQ Trigger: CTGCATTTTAAAAACAGATATTGCCAGATTACCCCATATGAAGAATGCATTGGATTTCCGCTTGTACCAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661209.1 |
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| CDS CCA 72 bp | TTGTGTCTTTCTTACTGGTTCCTGAAACTGGTTTCCTaGCTTGAACAAAAGGAGAAGGGTAATACAGTAATT | + |
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Preference number: 6 (lower is better) Translates to: LCLSYWFLKLVS*LEQKEKGNTVI Trigger: AATTACTGTATTACCCTTCTCCTTTTGTTCAAGCCAGGAAACCAGTTTCAGGAACCAGTAAGAAAGACACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664777.1 |
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| CDS GCA 72 bp | TGTGAGAGTCTCTCTAAGATAAAAACATTTCGTCTCTaGATTATTGATTGCCTACCATGGTTCTCATATCAC | + |
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Preference number: 6 (lower is better) Translates to: CESLSKIKTFRL*IIDCLPWFSYH Trigger: GTGATATGAGAACCATGGTAGGCAATCAATAATGCAGAGACGAAATGTTTTTATCTTAGAGAGACTCTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659537.1 |
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| CDS CAA 72 bp | ATTTGTGGAATATGCAAAGAGATAAATGAGATGTATTaGCTTTACAGCATTCACCAGGGCTTAGAAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: ICGICKEINEMY*LYSIHQGLEDP Trigger: AGGGTCTTCTAAGCCCTGGTGAATGCTGTAAAGCAAATACATCTCATTTATCTCTTTGCATATTCCACAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587085.1 ENST00000666399.1 |
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| CDS CAA 90 bp | TCAGATGGTAAACCATTTTATTTAATATTCAGCCTGGTTAGAGATTaGAATGGCTATAATAGTTGGGGAGAGGTGGTAATAGTAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: SDGKPFYLIFSLVRD*NGYNSWGEVVIVET Trigger: AGTCTCTACTATTACCACCTCTCCCCAACTATTATAGCCATTCAAATCTCTAACCAGGCTGAATATTAAATAAAATGGTTTACCATCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587085.1 ENST00000666399.1 |
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| CDS TCA 72 bp | CATTCATGCGCAGCATGTATCAGAATTAATTCCCTTTaGATAATATTCCATTGTGTGCGTATTCCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: HSCAACIRINSL*IIFHCVRIPHF Trigger: AAAATGTGGAATACGCACACAATGGAATATTATTCAAAGGGAATTAATTCTGATACATGCTGCGCATGAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664138.1 ENST00000667658.1 ENST00000671333.1 |
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