Pregenerated sensors for LINC01315 (Homo sapiens)
Ensembl gene IDs: ENSG00000229891Ensembl transcript IDs: ENST00000412060.1, ENST00000424852.1, ENST00000432473.1, ENST00000653912.1, ENST00000669665.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCGCGGTCGCCCCGCAGTCCCGTATGCGGCGAAACCGCCGGGGCTaGTTACCTGGCCCGCACCCTCACGCTCCCGTCCGGGCTGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: PAVAPQSRMRRNRRG*LPGPHPHAPVRAAQ Trigger: CTGCGCAGCCCGGACGGGAGCGTGAGGGTGCGGGCCAGGTAAGCAGCCCCGGCGGTTTCGCCGCATACGGGACTGCGGGGCGACCGCGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 90 bp | GCCGCTGCGCGTGGCTGGTGCCCGCGGTCGCCCCGCAGTCCCGTATaGGGCGAAACCGCCGGGGCTGCTTACCTGGCCCGCACCCTCACG | + |
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Preference number: 5 (lower is better) Translates to: AAARGWCPRSPRSPV*GETAGAAYLARTLT Trigger: CGTGAGGGTGCGGGCCAGGTAAGCAGCCCCGGCGGTTTCGCCGCATACGGGACTGCGGGGCGACCGCGGGCACCAGCCACGCGCAGCGGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 90 bp | GAGATCCTTCAGAGCGCGGACCCGGCCGAGACCCCGCGGAGCCGCTaGGCGTGGCTGGTGCCCGCGGTCGCCCCGCAGTCCCGTATGCGG | + |
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Preference number: 5 (lower is better) Translates to: EILQSADPAETPRSR*AWLVPAVAPQSRMR Trigger: CCGCATACGGGACTGCGGGGCGACCGCGGGCACCAGCCACGCGCAGCGGCTCCGCGGGGTCTCGGCCGGGTCCGCGCTCTGAAGGATCTC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 90 bp | CTTCAGAGCGCGGACCCGGCCGAGACCCCGCGGAGCCGCTGCGCGTaGCTGGTGCCCGCGGTCGCCCCGCAGTCCCGTATGCGGCGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LQSADPAETPRSRCA*LVPAVAPQSRMRRN Trigger: GTTTCGCCGCATACGGGACTGCGGGGCGACCGCGGGCACCAGCCACGCGCAGCGGCTCCGCGGGGTCTCGGCCGGGTCCGCGCTCTGAAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 90 bp | CGCCCCGCAGTCCCGTATGCGGCGAAACCGCCGGGGCTGCTTACCTaGCCCGCACCCTCACGCTCCCGTCCGGGCTGCGCAGCCGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: RPAVPYAAKPPGLLT*PAPSRSRPGCAAAS Trigger: AGAAGCGGCTGCGCAGCCCGGACGGGAGCGTGAGGGTGCGGGCCAGGTAAGCAGCCCCGGCGGTTTCGCCGCATACGGGACTGCGGGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 90 bp | ACAGGCTCAACAGCTGCGAGTCCCCGGGACTGCCGACCTCAGCCTTaGGGATCCGTCTTGACCACCCCCGGATTCGGAGGCGCCCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TGSTAASPRDCRPQP*GSVLTTPGFGGARA Trigger: GGCCCGGGCGCCTCCGAATCCGGGGGTGGTCAAGACGGATCCCCAAGGCTGAGGTCGGCAGTCCCGGGGACTCGCAGCTGTTGAGCCTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 90 bp | GTCACCGGAGATGCTGCAGCTCGAGGGTCCCGCCTGCACCATCCATaGCTCTCGAGATCCTTCAGAGCGCGGACCCGGCCGAGACCCCGC | + |
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Preference number: 5 (lower is better) Translates to: VTGDAAARGSRLHHP*LSRSFRARTRPRPR Trigger: GCGGGGTCTCGGCCGGGTCCGCGCTCTGAAGGATCTCGAGAGCCATGGATGGTGCAGGCGGGACCCTCGAGCTGCAGCATCTCCGGTGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 90 bp | CCGGGGCTGCTTACCTGGCCCGCACCCTCACGCTCCCGTCCGGGCTaGGCAGCCGCTTCTCTCACACATTTTGCGATAACATCGATGGCG | + |
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Preference number: 5 (lower is better) Translates to: PGLLTWPAPSRSRPG*AAASLTHFAITSMA Trigger: CGCCATCGATGTTATCGCAAAATGTGTGAGAGAAGCGGCTGCGCAGCCCGGACGGGAGCGTGAGGGTGCGGGCCAGGTAAGCAGCCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 90 bp | CTCAGCATTTGGGCTTTGACCTCAGGTCTCCGGGTGAGCGCACACTaGCAGGAGCTGTACATCCTCGCGGCTGCCCACCCTTGGGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: LSIWALTSGLRVSAH*QELYILAAAHPWVW Trigger: CCAAACCCAAGGGTGGGCAGCCGCGAGGATGTACAGCTCCTGGCAGTGTGCGCTCACCCGGAGACCTGAGGTCAAAGCCCAAATGCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS CCA 90 bp | GCAGGGGAAGGAGCTGGGTATGTTTGGGAGGAGAAGCCGCGTGGCTaGTGGGGGACAGGAGCAGGCTCAATGTTTGTGATATTAAATGTC | + |
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Preference number: 5 (lower is better) Translates to: AGEGAGYVWEEKPRG*WGTGAGSMFVILNV Trigger: GACATTTAATATCACAAACATTGAGCCTGCTCCTGTCCCCCACCAGCCACGCGGCTTCTCCTCCCAAACATACCCAGCTCCTTCCCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS CCA 90 bp | GAAGGCAGGGGAAGGAGCTGGGTATGTTTGGGAGGAGAAGCCGCGTaGCTGGTGGGGGACAGGAGCAGGCTCAATGTTTGTGATATTAAA | + |
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Preference number: 5 (lower is better) Translates to: EGRGRSWVCLGGEAA*LVGDRSRLNVCDIK Trigger: TTTAATATCACAAACATTGAGCCTGCTCCTGTCCCCCACCAGCCACGCGGCTTCTCCTCCCAAACATACCCAGCTCCTTCCCCTGCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS GCA 90 bp | CTCACGCTCCCGTCCGGGCTGCGCAGCCGCTTCTCTCACACATTTTaGGATAACATCGATGGCGAAAGAAAATGTTGTAAATCCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LTLPSGLRSRFSHTF*DNIDGERKCCKSSC Trigger: GCAGGAGGATTTACAACATTTTCTTTCGCCATCGATGTTATCGCAAAATGTGTGAGAGAAGCGGCTGCGCAGCCCGGACGGGAGCGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS TCA 90 bp | TCGGATTTCTTTGTGGCATCCACTTCATCGCTCAGCAGCCAGCCATaGTGTCATAAGCCCATCAGATTTCCGGTAGGGGGAAAACGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SDFFVASTSSLSSQP*CHKPIRFPVGGKRW Trigger: CCAGCGTTTTCCCCCTACCGGAAATCTGATGGGCTTATGACATCATGGCTGGCTGCTGAGCGATGAAGTGGATGCCACAAAGAAATCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS TCA 90 bp | TCGGATTTCTTTGTGGCATCCACTTCATCGCTCAGCAGCCAGCCATaGTGTCATAAGCCCATCAGATTTCCGGTAGGGGGAAAACGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SDFFVASTSSLSSQP*CHKPIRFPVGGKRC Trigger: GCAGCGTTTTCCCCCTACCGGAAATCTGATGGGCTTATGACATCATGGCTGGCTGCTGAGCGATGAAGTGGATGCCACAAAGAAATCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432473.1 |
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| CDS TCA 90 bp | ACGCCTGTTACTACAGCTGGAGGGAAACCGATTTCAGAATCTATCTaGTATGTCGGATTTCTTTGTGGCATCCACTTCATCGCTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TPVTTAGGKPISESI*YVGFLCGIHFIAQQ Trigger: CTGCTGAGCGATGAAGTGGATGCCACAAAGAAATCCGACATATCAGATAGATTCTGAAATCGGTTTCCCTCCAGCTGTAGTAACAGGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS CCA 90 bp | AGGGAAACCGATTTCAGAATCTATCTGATATGTCGGATTTCTTTGTaGCATCCACTTCATCGCTCAGCAGCCAGCCATGATGTCATAAGC | + |
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Preference number: 5 (lower is better) Translates to: RETDFRIYLICRISL*HPLHRSAASHDVIS Trigger: GCTTATGACATCATGGCTGGCTGCTGAGCGATGAAGTGGATGCCACAAAGAAATCCGACATATCAGATAGATTCTGAAATCGGTTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS GCA 72 bp | CGTGGCTGGTGCCCGCGGTCGCCCCGCAGTCCCGTATaGGGCGAAACCGCCGGGGCTGCTTACCTGGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: RGWCPRSPRSPV*GETAGAAYLAR Trigger: GCGGGCCAGGTAAGCAGCCCCGGCGGTTTCGCCGCATACGGGACTGCGGGGCGACCGCGGGCACCAGCCACG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 72 bp | GCCCCGCAGTCCCGTATGCGGCGAAACCGCCGGGGCTaGTTACCTGGCCCGCACCCTCACGCTCCCGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: APQSRMRRNRRG*LPGPHPHAPVR Trigger: CCGGACGGGAGCGTGAGGGTGCGGGCCAGGTAAGCAGCCCCGGCGGTTTCGCCGCATACGGGACTGCGGGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS TCA 72 bp | CCCGGGACTGCCGACCTCAGCCTTGGGGATCCGTCTTaGCCACCCCCGGATTCGGAGGCGCCCGGGCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: PGTADLSLGDPS*PPPDSEAPGPD Trigger: GTCCGGCCCGGGCGCCTCCGAATCCGGGGGTGGTCAAGACGGATCCCCAAGGCTGAGGTCGGCAGTCCCGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 72 bp | GTCCCGTATGCGGCGAAACCGCCGGGGCTGCTTACCTaGCCCGCACCCTCACGCTCCCGTCCGGGCTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: VPYAAKPPGLLT*PAPSRSRPGCA Trigger: TGCGCAGCCCGGACGGGAGCGTGAGGGTGCGGGCCAGGTAAGCAGCCCCGGCGGTTTCGCCGCATACGGGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 72 bp | CCGGATTCGGAGGCGCCCGGGCCGGACCACCTGTGCTaGTCTCCACCTCCTCGGCAACCCCGGGTCACCGGA | + |
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Preference number: 6 (lower is better) Translates to: PDSEAPGPDHLC*SPPPRQPRVTG Trigger: TCCGGTGACCCGGGGTTGCCGAGGAGGTGGAGACCAGCACAGGTGGTCCGGCCCGGGCGCCTCCGAATCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 72 bp | TCCACCTCCTCGGCAACCCCGGGTCACCGGAGATGCTaGAGCTCGAGGGTCCCGCCTGCACCATCCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: STSSATPGHRRC*SSRVPPAPSMA Trigger: AGCCATGGATGGTGCAGGCGGGACCCTCGAGCTGCAGCATCTCCGGTGACCCGGGGTTGCCGAGGAGGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 72 bp | GTCTCCACCTCCTCGGCAACCCCGGGTCACCGGAGATaGTGCAGCTCGAGGGTCCCGCCTGCACCATCCATG | + |
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Preference number: 6 (lower is better) Translates to: VSTSSATPGHRR*CSSRVPPAPSM Trigger: CATGGATGGTGCAGGCGGGACCCTCGAGCTGCAGCATCTCCGGTGACCCGGGGTTGCCGAGGAGGTGGAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS GCA 72 bp | CAGTCTCTGGAACGCTGCCCCCGGGTTGCTGAAGGGTaGCTCGGTCACGGGGCCGCGTCTCCACAGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: QSLERCPRVAEG*LGHGAASPQAQ Trigger: TTGAGCCTGTGGAGACGCGGCCCCGTGACCGAGGCACCCTTCAGCAACCCGGGGGCAGCGTTCCAGAGACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS CCA 72 bp | GATGCTGCAGCTCGAGGGTCCCGCCTGCACCATCCATaGCTCTCGAGATCCTTCAGAGCGCGGACCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: DAAARGSRLHHP*LSRSFRARTRP Trigger: CGGCCGGGTCCGCGCTCTGAAGGATCTCGAGAGCCATGGATGGTGCAGGCGGGACCCTCGAGCTGCAGCATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 72 bp | ACAGCTGCGAGTCCCCGGGACTGCCGACCTCAGCCTTaGGGATCCGTCTTGACCACCCCCGGATTCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: TAASPRDCRPQP*GSVLTTPGFGG Trigger: GCCTCCGAATCCGGGGGTGGTCAAGACGGATCCCCAAGGCTGAGGTCGGCAGTCCCGGGGACTCGCAGCTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS TCA 72 bp | AGAAGTTCAGTCTCTGGAACGCTGCCCCCGGGTTGCTaGAGGGTGCCTCGGTCACGGGGCCGCGTCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: RSSVSGTLPPGC*RVPRSRGRVST Trigger: TGTGGAGACGCGGCCCCGTGACCGAGGCACCCTTCAGCAACCCGGGGGCAGCGTTCCAGAGACTGAACTTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS GCA 72 bp | GGGTCACCGGAGATGCTGCAGCTCGAGGGTCCCGCCTaGACCATCCATGGCTCTCGAGATCCTTCAGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GSPEMLQLEGPA*TIHGSRDPSER Trigger: GCGCTCTGAAGGATCTCGAGAGCCATGGATGGTGCAGGCGGGACCCTCGAGCTGCAGCATCTCCGGTGACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CAA 72 bp | GCTCCCGCCTCCCAGGAGGTGCTCAGCATTTGGGCTTaGACCTCAGGTCTCCGGGTGAGCGCACACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: APASQEVLSIWA*TSGLRVSAHCQ Trigger: CTGGCAGTGTGCGCTCACCCGGAGACCTGAGGTCAAAGCCCAAATGCTGAGCACCTCCTGGGAGGCGGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS CCA 72 bp | GACCATGCTCCCGCCTCCCAGGAGGTGCTCAGCATTTaGGCTTTGACCTCAGGTCTCCGGGTGAGCGCACAC | + |
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Preference number: 6 (lower is better) Translates to: DHAPASQEVLSI*ALTSGLRVSAH Trigger: GTGTGCGCTCACCCGGAGACCTGAGGTCAAAGCCCAAATGCTGAGCACCTCCTGGGAGGCGGGAGCATGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS CAA 90 bp | GCAGACCATGCTCCCGCCTCCCAGGAGGTGCTCAGCATTTGGGCTTaGACCTCAGGTCTCCGGGTGAGCGCACACTGCCAGGAGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: ADHAPASQEVLSIWA*TSGLRVSAHCQELY Trigger: GTACAGCTCCTGGCAGTGTGCGCTCACCCGGAGACCTGAGGTCAAAGCCCAAATGCTGAGCACCTCCTGGGAGGCGGGAGCATGGTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS GCA 72 bp | AAACGCTGGCCCGCACCCTCACGCTCCCGTCCGGGCTaGGCAGCCGCTTCTCTCACACATTTTGCGATAACA | + |
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Preference number: 6 (lower is better) Translates to: KRWPAPSRSRPG*AAASLTHFAIT Trigger: TGTTATCGCAAAATGTGTGAGAGAAGCGGCTGCGCAGCCCGGACGGGAGCGTGAGGGTGCGGGCCAGCGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412060.1 ENST00000653912.1 |
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| CDS GCA 72 bp | CTTACCTGGCCCGCACCCTCACGCTCCCGTCCGGGCTaGGCAGCCGCTTCTCTCACACATTTTGCGATAACA | + |
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Preference number: 6 (lower is better) Translates to: LTWPAPSRSRPG*AAASLTHFAIT Trigger: TGTTATCGCAAAATGTGTGAGAGAAGCGGCTGCGCAGCCCGGACGGGAGCGTGAGGGTGCGGGCCAGGTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424852.1 ENST00000432473.1 ENST00000669665.1 |
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| CDS CCA 72 bp | GCTGGGTATGTTTGGGAGGAGAAGCCGCGTGGCTGGTaGGGGACAGGAGCAGGCTCAATGTTTGTGATATTA | + |
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Preference number: 6 (lower is better) Translates to: AGYVWEEKPRGW*GTGAGSMFVIL Trigger: TAATATCACAAACATTGAGCCTGCTCCTGTCCCCCACCAGCCACGCGGCTTCTCCTCCCAAACATACCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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| CDS TCA 72 bp | TTTGTGGCATCCACTTCATCGCTCAGCAGCCAGCCATaGTGTCATAAGCCCATCAGATTTCCGGTAGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: FVASTSSLSSQP*CHKPIRFPVGG Trigger: TCCCCCTACCGGAAATCTGATGGGCTTATGACATCATGGCTGGCTGCTGAGCGATGAAGTGGATGCCACAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS CAA 90 bp | TGGAGGGAAACCGATTTCAGAATCTATCTGATATGTCGGATTTCTTaGTGGCATCCACTTCATCGCTCAGCAGCCAGCCATGATGTCATA | + |
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Preference number: 6 (lower is better) Translates to: WRETDFRIYLICRIS*WHPLHRSAASHDVI Trigger: TATGACATCATGGCTGGCTGCTGAGCGATGAAGTGGATGCCACAAAGAAATCCGACATATCAGATAGATTCTGAAATCGGTTTCCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS CAA 72 bp | ACCGATTTCAGAATCTATCTGATATGTCGGATTTCTTaGTGGCATCCACTTCATCGCTCAGCAGCCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: TDFRIYLICRIS*WHPLHRSAASH Trigger: ATGGCTGGCTGCTGAGCGATGAAGTGGATGCCACAAAGAAATCCGACATATCAGATAGATTCTGAAATCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS CCA 72 bp | GATTTCAGAATCTATCTGATATGTCGGATTTCTTTGTaGCATCCACTTCATCGCTCAGCAGCCAGCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: DFRIYLICRISL*HPLHRSAASHD Trigger: ATCATGGCTGGCTGCTGAGCGATGAAGTGGATGCCACAAAGAAATCCGACATATCAGATAGATTCTGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS TCA 72 bp | ACTACAGCTGGAGGGAAACCGATTTCAGAATCTATCTaGTATGTCGGATTTCTTTGTGGCATCCACTTCATC | + |
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Preference number: 6 (lower is better) Translates to: TTAGGKPISESI*YVGFLCGIHFI Trigger: GATGAAGTGGATGCCACAAAGAAATCCGACATATCAGATAGATTCTGAAATCGGTTTCCCTCCAGCTGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412060.1 ENST00000424852.1 ENST00000432473.1 ENST00000653912.1 ENST00000669665.1 |
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| CDS TCA 72 bp | CTCAATGTTTGTGATATTAAATGTCAGGCAGAAACCTaGAAACCCCAGCTACCCAGATGTTTTCTCAATATC | + |
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Preference number: 6 (lower is better) Translates to: LNVCDIKCQAET*KPQLPRCFLNI Trigger: GATATTGAGAAAACATCTGGGTAGCTGGGGTTTTCAGGTTTCTGCCTGACATTTAATATCACAAACATTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424852.1 ENST00000669665.1 |
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