RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01311 (Homo sapiens)

Ensembl gene IDs: ENSG00000260924

Ensembl transcript IDs: ENST00000565162.2

Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGGGCGGCGCGCGCTGATGGCGTCACGAGGGCGCGTCCAGTCGTCTaGGGCGGCGCACGCGCTCTCCCGTTGCTGCTGGGGCTGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GAARADGVTRARPVV*GGARALPLLLGLEP
Trigger: CGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCGCCCTCGTGACGCCATCAGCGCGCGCCGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 90 bp GGGCGCGTCCAGTCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTaGTGGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GRVQSSGAAHALSRC*WGWSRAAQTLAAFA
Trigger: GGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 90 bp CGCGTCCAGTCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTGCTaGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCC +
Preference number: 5 (lower is better)
Translates to: RVQSSGAAHALSRCC*GWSRAAQTLAAFAA
Trigger: GGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 90 bp GGGAGGGCCGCCGAGTCGGATCGCGTTCCCGTAGCCCACAGGCTGTaGGGGCGACCACGCTTGCGCTCGGAAGTTGGGGCGGCGCGCGCT +
Preference number: 5 (lower is better)
Translates to: GRAAESDRVPVAHRL*GRPRLRSEVGAARA
Trigger: AGCGCGCGCCGCCCCAACTTCCGAGCGCAAGCGTGGTCGCCCCCACAGCCTGTGGGCTACGGGAACGCGATCCGACTCGGCGGCCCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 90 bp GCCGAGGCTGGCGGCCATTCTGCTAGTCGCCCCGAGGCAGCCCTATaGAGGCCCCTGCCGCCGCTACCGATGACCCTGACCAGTCACCCC +
Preference number: 5 (lower is better)
Translates to: AEAGGHSASRPEAAL*RPLPPLPMTLTSHP
Trigger: GGGGTGACTGGTCAGGGTCATCGGTAGCGGCGGCAGGGGCCTGCATAGGGCTGCCTCGGGGCGACTAGCAGAATGGCCGCCAGCCTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 90 bp CCTTTGCCGCCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATTaGTTGGGCTGCTTGGAGGCCCCTCGCGGTCACTGCCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: PLPPAPPLTRPLVRD*LGCLEAPRGHCHQP
Trigger: GGGCTGGTGGCAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 90 bp CCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCCTGCACCGCCACTaGCTCGACCCCTCGTCCGAGATTGATTGGGCTGCTTGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: PRCSDPGCLCRLHRH*LDPSSEIDWAAWRP
Trigger: GGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 90 bp TGGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCCTaGACCGCCACTGACTCGACCCCTCGTCCGAGATTGATTGGGCTG +
Preference number: 5 (lower is better)
Translates to: WGWSRAAQTLAAFAA*TATDSTPRPRLIGL
Trigger: CAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 90 bp GGCCCCGCTCAGTACCCGGCCATAGGGGGACACGGAGAAGCTTCCTaGGGACCATTTCCGAAAGAGGAATGGACTTCCTCAGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: GPAQYPAIGGHGEAS*GPFPKEEWTSSASG
Trigger: CCCCGAGGCTGAGGAAGTCCATTCCTCTTTCGGAAATGGTCCCCAGGAAGCTTCTCCGTGTCCCCCTATGGCCGGGTACTGAGCGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 90 bp CATCCCTCTGCCCCCAAGTTCTGCTCAAATCCCTGCCGTGGCCGGTaGCTCACTAGCTCCAAGCAGCCGAAGCTCCGTCTCACAAGCGCG +
Preference number: 5 (lower is better)
Translates to: HPSAPKFCSNPCRGR*LTSSKQPKLRLTSA
Trigger: CGCGCTTGTGAGACGGAGCTTCGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGCAGAGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 90 bp GATGCACCATCTCATCCCTCTGCCCCCAAGTTCTGCTCAAATCCCTaGCGTGGCCGGTGGCTCACTAGCTCCAAGCAGCCGAAGCTCCGT +
Preference number: 5 (lower is better)
Translates to: DAPSHPSAPKFCSNP*RGRWLTSSKQPKLR
Trigger: ACGGAGCTTCGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGCAGAGGGATGAGATGGTGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 90 bp GAGAGCAGCCTCCCTTCTGCTCAGGTTGGGCCGGACCCTGACCCCTaGCCCTCCCCAACATGGCCCTTATTACACTGTTGTCACATTTGT +
Preference number: 5 (lower is better)
Translates to: ESSLPSAQVGPDPDP*PSPTWPLLHCCHIC
Trigger: ACAAATGTGACAACAGTGTAATAAGGGCCATGTTGGGGAGGGTCAGGGGTCAGGGTCCGGCCCAACCTGAGCAGAAGGGAGGCTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 90 bp GCCATGACCTGGGAAGCTACACTTAGCCACAGGAGTGTCATCTCCTaGAGTGACCTCAAGGGATGCACCATCTCATCCCTCTGCCCCCAA +
Preference number: 5 (lower is better)
Translates to: AMTWEATLSHRSVIS*SDLKGCTISSLCPQ
Trigger: TTGGGGGCAGAGGGATGAGATGGTGCATCCCTTGAGGTCACTTCAGGAGATGACACTCCTGTGGCTAAGTGTAGCTTCCCAGGTCATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 90 bp TGGGAAACATGGTGGCCCTGTAGTTCCACTCCACCCATTCCTACCTaGCAAATATCCCTGAGAGCAGCCTCCCTTCTGCTCAGGTTGGGC +
Preference number: 5 (lower is better)
Translates to: WETWWPCSSTPPIPT*QISLRAASLLLRLG
Trigger: GCCCAACCTGAGCAGAAGGGAGGCTGCTCTCAGGGATATTTGTCAGGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCATGTTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 90 bp CTGAGGATCACGGATAAACATGACAAGGCCACCATGGGTGACCCATaGGAAACATGGTGGCCCTGTAGTTCCACTCCACCCATTCCTACC +
Preference number: 5 (lower is better)
Translates to: LRITDKHDKATMGDP*ETWWPCSSTPPIPT
Trigger: GGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCATGTTTCCCATGGGTCACCCATGGTGGCCTTGTCATGTTTATCCGTGATCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp TCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTGCTaGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSGAAHALSRCC*GWSRAAQTLAA
Trigger: GGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp CGCGCTGATGGCGTCACGAGGGCGCGTCCAGTCGTCTaGGGCGGCGCACGCGCTCTCCCGTTGCTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: RADGVTRARPVV*GGARALPLLLG
Trigger: CCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCGCCCTCGTGACGCCATCAGCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 72 bp CGCGCTCTCCCGTTGCTGCTGGGGCTGGAGCCGCGCTaGTCAGACCCTGGCTGCCTTTGCCGCCTGCACCGC +
Preference number: 6 (lower is better)
Translates to: RALPLLLGLEPR*SDPGCLCRLHR
Trigger: GCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 72 bp CAGTCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTaGTGGGGCTGGAGCCGCGCTGCTCAGACCCTGGCT +
Preference number: 6 (lower is better)
Translates to: QSSGAAHALSRC*WGWSRAAQTLA
Trigger: AGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CAA 72 bp ACAGGCTGTGGGGGCGACCACGCTTGCGCTCGGAAGTaGGGGCGGCGCGCGCTGATGGCGTCACGAGGGCGC +
Preference number: 6 (lower is better)
Translates to: TGCGGDHACARK*GRRALMASRGR
Trigger: GCGCCCTCGTGACGCCATCAGCGCGCGCCGCCCCAACTTCCGAGCGCAAGCGTGGTCGCCCCCACAGCCTGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 72 bp ACCACGCTTGCGCTCGGAAGTTGGGGCGGCGCGCGCTaGTGGCGTCACGAGGGCGCGTCCAGTCGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: TTLALGSWGGAR*WRHEGASSRLG
Trigger: CCCCAGACGACTGGACGCGCCCTCGTGACGCCATCAGCGCGCGCCGCCCCAACTTCCGAGCGCAAGCGTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 72 bp GGCGGCCATTCTGCTAGTCGCCCCGAGGCAGCCCTATaGAGGCCCCTGCCGCCGCTACCGATGACCCTGACC +
Preference number: 6 (lower is better)
Translates to: GGHSASRPEAAL*RPLPPLPMTLT
Trigger: GGTCAGGGTCATCGGTAGCGGCGGCAGGGGCCTGCATAGGGCTGCCTCGGGGCGACTAGCAGAATGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp GCCGAGTCGGATCGCGTTCCCGTAGCCCACAGGCTGTaGGGGCGACCACGCTTGCGCTCGGAAGTTGGGGCG +
Preference number: 6 (lower is better)
Translates to: AESDRVPVAHRL*GRPRLRSEVGA
Trigger: CGCCCCAACTTCCGAGCGCAAGCGTGGTCGCCCCCACAGCCTGTGGGCTACGGGAACGCGATCCGACTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CAA 90 bp GCCTTTGCCGCCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATaGATTGGGCTGCTTGGAGGCCCCTCGCGGTCACTGCCACCAGCC +
Preference number: 6 (lower is better)
Translates to: AFAACTATDSTPRPR*IGLLGGPSRSLPPA
Trigger: GGCTGGTGGCAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 72 bp AGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCCTaGACCGCCACTGACTCGACCCCTCGTCCGAGATTG +
Preference number: 6 (lower is better)
Translates to: SRAAQTLAAFAA*TATDSTPRPRL
Trigger: CAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 72 bp CCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATTaGTTGGGCTGCTTGGAGGCCCCTCGCGGTCACTGC +
Preference number: 6 (lower is better)
Translates to: PAPPLTRPLVRD*LGCLEAPRGHC
Trigger: GCAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CAA 72 bp GCCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATaGATTGGGCTGCTTGGAGGCCCCTCGCGGTCACTG +
Preference number: 6 (lower is better)
Translates to: ACTATDSTPRPR*IGLLGGPSRSL
Trigger: CAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 72 bp GATCTTCGGGTTTCATCGCGAGTCCCCGTCCTTGCCTaGAGCCCCTGGATTCTCGCCGGCCCAGCCACATCG +
Preference number: 6 (lower is better)
Translates to: DLRVSSRVPVLA*SPWILAGPATS
Trigger: CGATGTGGCTGGGCCGGCGAGAATCCAGGGGCTGCAGGCAAGGACGGGGACTCGCGATGAAACCCGAAGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 72 bp TCAGACCCTGGCTGCCTTTGCCGCCTGCACCGCCACTaGCTCGACCCCTCGTCCGAGATTGATTGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: SDPGCLCRLHRH*LDPSSEIDWAA
Trigger: AGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp GCCCCCAAGTTCTGCTCAAATCCCTGCCGTGGCCGGTaGCTCACTAGCTCCAAGCAGCCGAAGCTCCGTCTC +
Preference number: 6 (lower is better)
Translates to: APKFCSNPCRGR*LTSSKQPKLRL
Trigger: GAGACGGAGCTTCGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS GCA 72 bp TCTCATCCCTCTGCCCCCAAGTTCTGCTCAAATCCCTaGCGTGGCCGGTGGCTCACTAGCTCCAAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: SHPSAPKFCSNP*RGRWLTSSKQP
Trigger: CGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGCAGAGGGATGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp GGAGAAGCTTCCTGGGGACCATTTCCGAAAGAGGAATaGACTTCCTCAGCCTCGGGGACCGGCCATCCAGGC +
Preference number: 6 (lower is better)
Translates to: GEASWGPFPKEE*TSSASGTGHPG
Trigger: GCCTGGATGGCCGGTCCCCGAGGCTGAGGAAGTCCATTCCTCTTTCGGAAATGGTCCCCAGGAAGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 72 bp CTCCCTTCTGCTCAGGTTGGGCCGGACCCTGACCCCTaGCCCTCCCCAACATGGCCCTTATTACACTGTTGT +
Preference number: 6 (lower is better)
Translates to: LPSAQVGPDPDP*PSPTWPLLHCC
Trigger: ACAACAGTGTAATAAGGGCCATGTTGGGGAGGGTCAGGGGTCAGGGTCCGGCCCAACCTGAGCAGAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 72 bp GAACCAGGGGCCACCTCAAGACCTGGGAACATGGACTaGACACAGACAAACGGGACAGGGGCAGAGGTGATG +
Preference number: 6 (lower is better)
Translates to: EPGATSRPGNMD*TQTNGTGAEVM
Trigger: CATCACCTCTGCCCCTGTCCCGTTTGTCTGTGTTCAGTCCATGTTCCCAGGTCTTGAGGTGGCCCCTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp CAGTACCCGGCCATAGGGGGACACGGAGAAGCTTCCTaGGGACCATTTCCGAAAGAGGAATGGACTTCCTCA +
Preference number: 6 (lower is better)
Translates to: QYPAIGGHGEAS*GPFPKEEWTSS
Trigger: TGAGGAAGTCCATTCCTCTTTCGGAAATGGTCCCCAGGAAGCTTCTCCGTGTCCCCCTATGGCCGGGTACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp TCTCCATTGACCAGGCCTGACCTGGGAGCCATGACCTaGGAAGCTACACTTAGCCACAGGAGTGTCATCTCC +
Preference number: 6 (lower is better)
Translates to: SPLTRPDLGAMT*EATLSHRSVIS
Trigger: GGAGATGACACTCCTGTGGCTAAGTGTAGCTTCCCAGGTCATGGCTCCCAGGTCAGGCCTGGTCAATGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp CATGACAAGGCCACCATGGGTGACCCATGGGAAACATaGTGGCCCTGTAGTTCCACTCCACCCATTCCTACC +
Preference number: 6 (lower is better)
Translates to: HDKATMGDPWET*WPCSSTPPIPT
Trigger: GGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCATGTTTCCCATGGGTCACCCATGGTGGCCTTGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CCA 72 bp GGTAAGGGGCATAGAACCAGGGGCCACCTCAAGACCTaGGAACATGGACTGAACACAGACAAACGGGACAGG +
Preference number: 6 (lower is better)
Translates to: GKGHRTRGHLKT*EHGLNTDKRDR
Trigger: CCTGTCCCGTTTGTCTGTGTTCAGTCCATGTTCCCAGGTCTTGAGGTGGCCCCTGGTTCTATGCCCCTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS CAA 72 bp CATCCATCCACCACCCAACGCCCACTTAATTCTCCATaGACCAGGCCTGACCTGGGAGCCATGACCTGGGAA +
Preference number: 6 (lower is better)
Translates to: HPSTTQRPLNSP*TRPDLGAMTWE
Trigger: TTCCCAGGTCATGGCTCCCAGGTCAGGCCTGGTCAATGGAGAATTAAGTGGGCGTTGGGTGGTGGATGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 72 bp TGGTGGCCCTGTAGTTCCACTCCACCCATTCCTACCTaGCAAATATCCCTGAGAGCAGCCTCCCTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: WWPCSSTPPIPT*QISLRAASLLL
Trigger: GAGCAGAAGGGAGGCTGCTCTCAGGGATATTTGTCAGGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2
CDS TCA 72 bp TGGGAAGCTACACTTAGCCACAGGAGTGTCATCTCCTaGAGTGACCTCAAGGGATGCACCATCTCATCCCTC +
Preference number: 6 (lower is better)
Translates to: WEATLSHRSVIS*SDLKGCTISSL
Trigger: GAGGGATGAGATGGTGCATCCCTTGAGGTCACTTCAGGAGATGACACTCCTGTGGCTAAGTGTAGCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565162.2