Pregenerated sensors for LINC01311 (Homo sapiens)
Ensembl gene IDs: ENSG00000260924Ensembl transcript IDs: ENST00000565162.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | GGGGCGGCGCGCGCTGATGGCGTCACGAGGGCGCGTCCAGTCGTCTaGGGCGGCGCACGCGCTCTCCCGTTGCTGCTGGGGCTGGAGCCG | + |
Preference number: 5 (lower is better) Translates to: GAARADGVTRARPVV*GGARALPLLLGLEP Trigger: CGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCGCCCTCGTGACGCCATCAGCGCGCGCCGCCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 90 bp | GGGCGCGTCCAGTCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTaGTGGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCC | + |
Preference number: 5 (lower is better) Translates to: GRVQSSGAAHALSRC*WGWSRAAQTLAAFA Trigger: GGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 90 bp | CGCGTCCAGTCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTGCTaGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCC | + |
Preference number: 5 (lower is better) Translates to: RVQSSGAAHALSRCC*GWSRAAQTLAAFAA Trigger: GGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 90 bp | GGGAGGGCCGCCGAGTCGGATCGCGTTCCCGTAGCCCACAGGCTGTaGGGGCGACCACGCTTGCGCTCGGAAGTTGGGGCGGCGCGCGCT | + |
Preference number: 5 (lower is better) Translates to: GRAAESDRVPVAHRL*GRPRLRSEVGAARA Trigger: AGCGCGCGCCGCCCCAACTTCCGAGCGCAAGCGTGGTCGCCCCCACAGCCTGTGGGCTACGGGAACGCGATCCGACTCGGCGGCCCTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 90 bp | GCCGAGGCTGGCGGCCATTCTGCTAGTCGCCCCGAGGCAGCCCTATaGAGGCCCCTGCCGCCGCTACCGATGACCCTGACCAGTCACCCC | + |
Preference number: 5 (lower is better) Translates to: AEAGGHSASRPEAAL*RPLPPLPMTLTSHP Trigger: GGGGTGACTGGTCAGGGTCATCGGTAGCGGCGGCAGGGGCCTGCATAGGGCTGCCTCGGGGCGACTAGCAGAATGGCCGCCAGCCTCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 90 bp | CCTTTGCCGCCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATTaGTTGGGCTGCTTGGAGGCCCCTCGCGGTCACTGCCACCAGCCC | + |
Preference number: 5 (lower is better) Translates to: PLPPAPPLTRPLVRD*LGCLEAPRGHCHQP Trigger: GGGCTGGTGGCAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 90 bp | CCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCCTGCACCGCCACTaGCTCGACCCCTCGTCCGAGATTGATTGGGCTGCTTGGAGGCCC | + |
Preference number: 5 (lower is better) Translates to: PRCSDPGCLCRLHRH*LDPSSEIDWAAWRP Trigger: GGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 90 bp | TGGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCCTaGACCGCCACTGACTCGACCCCTCGTCCGAGATTGATTGGGCTG | + |
Preference number: 5 (lower is better) Translates to: WGWSRAAQTLAAFAA*TATDSTPRPRLIGL Trigger: CAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 90 bp | GGCCCCGCTCAGTACCCGGCCATAGGGGGACACGGAGAAGCTTCCTaGGGACCATTTCCGAAAGAGGAATGGACTTCCTCAGCCTCGGGG | + |
Preference number: 5 (lower is better) Translates to: GPAQYPAIGGHGEAS*GPFPKEEWTSSASG Trigger: CCCCGAGGCTGAGGAAGTCCATTCCTCTTTCGGAAATGGTCCCCAGGAAGCTTCTCCGTGTCCCCCTATGGCCGGGTACTGAGCGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 90 bp | CATCCCTCTGCCCCCAAGTTCTGCTCAAATCCCTGCCGTGGCCGGTaGCTCACTAGCTCCAAGCAGCCGAAGCTCCGTCTCACAAGCGCG | + |
Preference number: 5 (lower is better) Translates to: HPSAPKFCSNPCRGR*LTSSKQPKLRLTSA Trigger: CGCGCTTGTGAGACGGAGCTTCGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGCAGAGGGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 90 bp | GATGCACCATCTCATCCCTCTGCCCCCAAGTTCTGCTCAAATCCCTaGCGTGGCCGGTGGCTCACTAGCTCCAAGCAGCCGAAGCTCCGT | + |
Preference number: 5 (lower is better) Translates to: DAPSHPSAPKFCSNP*RGRWLTSSKQPKLR Trigger: ACGGAGCTTCGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGCAGAGGGATGAGATGGTGCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 90 bp | GAGAGCAGCCTCCCTTCTGCTCAGGTTGGGCCGGACCCTGACCCCTaGCCCTCCCCAACATGGCCCTTATTACACTGTTGTCACATTTGT | + |
Preference number: 5 (lower is better) Translates to: ESSLPSAQVGPDPDP*PSPTWPLLHCCHIC Trigger: ACAAATGTGACAACAGTGTAATAAGGGCCATGTTGGGGAGGGTCAGGGGTCAGGGTCCGGCCCAACCTGAGCAGAAGGGAGGCTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 90 bp | GCCATGACCTGGGAAGCTACACTTAGCCACAGGAGTGTCATCTCCTaGAGTGACCTCAAGGGATGCACCATCTCATCCCTCTGCCCCCAA | + |
Preference number: 5 (lower is better) Translates to: AMTWEATLSHRSVIS*SDLKGCTISSLCPQ Trigger: TTGGGGGCAGAGGGATGAGATGGTGCATCCCTTGAGGTCACTTCAGGAGATGACACTCCTGTGGCTAAGTGTAGCTTCCCAGGTCATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 90 bp | TGGGAAACATGGTGGCCCTGTAGTTCCACTCCACCCATTCCTACCTaGCAAATATCCCTGAGAGCAGCCTCCCTTCTGCTCAGGTTGGGC | + |
Preference number: 5 (lower is better) Translates to: WETWWPCSSTPPIPT*QISLRAASLLLRLG Trigger: GCCCAACCTGAGCAGAAGGGAGGCTGCTCTCAGGGATATTTGTCAGGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCATGTTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 90 bp | CTGAGGATCACGGATAAACATGACAAGGCCACCATGGGTGACCCATaGGAAACATGGTGGCCCTGTAGTTCCACTCCACCCATTCCTACC | + |
Preference number: 5 (lower is better) Translates to: LRITDKHDKATMGDP*ETWWPCSSTPPIPT Trigger: GGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCATGTTTCCCATGGGTCACCCATGGTGGCCTTGTCATGTTTATCCGTGATCCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | TCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTGCTaGGGCTGGAGCCGCGCTGCTCAGACCCTGGCTGCC | + |
Preference number: 6 (lower is better) Translates to: SSGAAHALSRCC*GWSRAAQTLAA Trigger: GGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | CGCGCTGATGGCGTCACGAGGGCGCGTCCAGTCGTCTaGGGCGGCGCACGCGCTCTCCCGTTGCTGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: RADGVTRARPVV*GGARALPLLLG Trigger: CCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTGGACGCGCCCTCGTGACGCCATCAGCGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 72 bp | CGCGCTCTCCCGTTGCTGCTGGGGCTGGAGCCGCGCTaGTCAGACCCTGGCTGCCTTTGCCGCCTGCACCGC | + |
Preference number: 6 (lower is better) Translates to: RALPLLLGLEPR*SDPGCLCRLHR Trigger: GCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 72 bp | CAGTCGTCTGGGGCGGCGCACGCGCTCTCCCGTTGCTaGTGGGGCTGGAGCCGCGCTGCTCAGACCCTGGCT | + |
Preference number: 6 (lower is better) Translates to: QSSGAAHALSRC*WGWSRAAQTLA Trigger: AGCCAGGGTCTGAGCAGCGCGGCTCCAGCCCCAGCAGCAACGGGAGAGCGCGTGCGCCGCCCCAGACGACTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CAA 72 bp | ACAGGCTGTGGGGGCGACCACGCTTGCGCTCGGAAGTaGGGGCGGCGCGCGCTGATGGCGTCACGAGGGCGC | + |
Preference number: 6 (lower is better) Translates to: TGCGGDHACARK*GRRALMASRGR Trigger: GCGCCCTCGTGACGCCATCAGCGCGCGCCGCCCCAACTTCCGAGCGCAAGCGTGGTCGCCCCCACAGCCTGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 72 bp | ACCACGCTTGCGCTCGGAAGTTGGGGCGGCGCGCGCTaGTGGCGTCACGAGGGCGCGTCCAGTCGTCTGGGG | + |
Preference number: 6 (lower is better) Translates to: TTLALGSWGGAR*WRHEGASSRLG Trigger: CCCCAGACGACTGGACGCGCCCTCGTGACGCCATCAGCGCGCGCCGCCCCAACTTCCGAGCGCAAGCGTGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 72 bp | GGCGGCCATTCTGCTAGTCGCCCCGAGGCAGCCCTATaGAGGCCCCTGCCGCCGCTACCGATGACCCTGACC | + |
Preference number: 6 (lower is better) Translates to: GGHSASRPEAAL*RPLPPLPMTLT Trigger: GGTCAGGGTCATCGGTAGCGGCGGCAGGGGCCTGCATAGGGCTGCCTCGGGGCGACTAGCAGAATGGCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | GCCGAGTCGGATCGCGTTCCCGTAGCCCACAGGCTGTaGGGGCGACCACGCTTGCGCTCGGAAGTTGGGGCG | + |
Preference number: 6 (lower is better) Translates to: AESDRVPVAHRL*GRPRLRSEVGA Trigger: CGCCCCAACTTCCGAGCGCAAGCGTGGTCGCCCCCACAGCCTGTGGGCTACGGGAACGCGATCCGACTCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CAA 90 bp | GCCTTTGCCGCCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATaGATTGGGCTGCTTGGAGGCCCCTCGCGGTCACTGCCACCAGCC | + |
Preference number: 6 (lower is better) Translates to: AFAACTATDSTPRPR*IGLLGGPSRSLPPA Trigger: GGCTGGTGGCAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 72 bp | AGCCGCGCTGCTCAGACCCTGGCTGCCTTTGCCGCCTaGACCGCCACTGACTCGACCCCTCGTCCGAGATTG | + |
Preference number: 6 (lower is better) Translates to: SRAAQTLAAFAA*TATDSTPRPRL Trigger: CAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGAGCAGCGCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 72 bp | CCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATTaGTTGGGCTGCTTGGAGGCCCCTCGCGGTCACTGC | + |
Preference number: 6 (lower is better) Translates to: PAPPLTRPLVRD*LGCLEAPRGHC Trigger: GCAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CAA 72 bp | GCCTGCACCGCCACTGACTCGACCCCTCGTCCGAGATaGATTGGGCTGCTTGGAGGCCCCTCGCGGTCACTG | + |
Preference number: 6 (lower is better) Translates to: ACTATDSTPRPR*IGLLGGPSRSL Trigger: CAGTGACCGCGAGGGGCCTCCAAGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 72 bp | GATCTTCGGGTTTCATCGCGAGTCCCCGTCCTTGCCTaGAGCCCCTGGATTCTCGCCGGCCCAGCCACATCG | + |
Preference number: 6 (lower is better) Translates to: DLRVSSRVPVLA*SPWILAGPATS Trigger: CGATGTGGCTGGGCCGGCGAGAATCCAGGGGCTGCAGGCAAGGACGGGGACTCGCGATGAAACCCGAAGATC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 72 bp | TCAGACCCTGGCTGCCTTTGCCGCCTGCACCGCCACTaGCTCGACCCCTCGTCCGAGATTGATTGGGCTGCT | + |
Preference number: 6 (lower is better) Translates to: SDPGCLCRLHRH*LDPSSEIDWAA Trigger: AGCAGCCCAATCAATCTCGGACGAGGGGTCGAGTCAGTGGCGGTGCAGGCGGCAAAGGCAGCCAGGGTCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | GCCCCCAAGTTCTGCTCAAATCCCTGCCGTGGCCGGTaGCTCACTAGCTCCAAGCAGCCGAAGCTCCGTCTC | + |
Preference number: 6 (lower is better) Translates to: APKFCSNPCRGR*LTSSKQPKLRL Trigger: GAGACGGAGCTTCGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS GCA 72 bp | TCTCATCCCTCTGCCCCCAAGTTCTGCTCAAATCCCTaGCGTGGCCGGTGGCTCACTAGCTCCAAGCAGCCG | + |
Preference number: 6 (lower is better) Translates to: SHPSAPKFCSNP*RGRWLTSSKQP Trigger: CGGCTGCTTGGAGCTAGTGAGCCACCGGCCACGGCAGGGATTTGAGCAGAACTTGGGGGCAGAGGGATGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | GGAGAAGCTTCCTGGGGACCATTTCCGAAAGAGGAATaGACTTCCTCAGCCTCGGGGACCGGCCATCCAGGC | + |
Preference number: 6 (lower is better) Translates to: GEASWGPFPKEE*TSSASGTGHPG Trigger: GCCTGGATGGCCGGTCCCCGAGGCTGAGGAAGTCCATTCCTCTTTCGGAAATGGTCCCCAGGAAGCTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 72 bp | CTCCCTTCTGCTCAGGTTGGGCCGGACCCTGACCCCTaGCCCTCCCCAACATGGCCCTTATTACACTGTTGT | + |
Preference number: 6 (lower is better) Translates to: LPSAQVGPDPDP*PSPTWPLLHCC Trigger: ACAACAGTGTAATAAGGGCCATGTTGGGGAGGGTCAGGGGTCAGGGTCCGGCCCAACCTGAGCAGAAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 72 bp | GAACCAGGGGCCACCTCAAGACCTGGGAACATGGACTaGACACAGACAAACGGGACAGGGGCAGAGGTGATG | + |
Preference number: 6 (lower is better) Translates to: EPGATSRPGNMD*TQTNGTGAEVM Trigger: CATCACCTCTGCCCCTGTCCCGTTTGTCTGTGTTCAGTCCATGTTCCCAGGTCTTGAGGTGGCCCCTGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | CAGTACCCGGCCATAGGGGGACACGGAGAAGCTTCCTaGGGACCATTTCCGAAAGAGGAATGGACTTCCTCA | + |
Preference number: 6 (lower is better) Translates to: QYPAIGGHGEAS*GPFPKEEWTSS Trigger: TGAGGAAGTCCATTCCTCTTTCGGAAATGGTCCCCAGGAAGCTTCTCCGTGTCCCCCTATGGCCGGGTACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | TCTCCATTGACCAGGCCTGACCTGGGAGCCATGACCTaGGAAGCTACACTTAGCCACAGGAGTGTCATCTCC | + |
Preference number: 6 (lower is better) Translates to: SPLTRPDLGAMT*EATLSHRSVIS Trigger: GGAGATGACACTCCTGTGGCTAAGTGTAGCTTCCCAGGTCATGGCTCCCAGGTCAGGCCTGGTCAATGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | CATGACAAGGCCACCATGGGTGACCCATGGGAAACATaGTGGCCCTGTAGTTCCACTCCACCCATTCCTACC | + |
Preference number: 6 (lower is better) Translates to: HDKATMGDPWET*WPCSSTPPIPT Trigger: GGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCATGTTTCCCATGGGTCACCCATGGTGGCCTTGTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CCA 72 bp | GGTAAGGGGCATAGAACCAGGGGCCACCTCAAGACCTaGGAACATGGACTGAACACAGACAAACGGGACAGG | + |
Preference number: 6 (lower is better) Translates to: GKGHRTRGHLKT*EHGLNTDKRDR Trigger: CCTGTCCCGTTTGTCTGTGTTCAGTCCATGTTCCCAGGTCTTGAGGTGGCCCCTGGTTCTATGCCCCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS CAA 72 bp | CATCCATCCACCACCCAACGCCCACTTAATTCTCCATaGACCAGGCCTGACCTGGGAGCCATGACCTGGGAA | + |
Preference number: 6 (lower is better) Translates to: HPSTTQRPLNSP*TRPDLGAMTWE Trigger: TTCCCAGGTCATGGCTCCCAGGTCAGGCCTGGTCAATGGAGAATTAAGTGGGCGTTGGGTGGTGGATGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 72 bp | TGGTGGCCCTGTAGTTCCACTCCACCCATTCCTACCTaGCAAATATCCCTGAGAGCAGCCTCCCTTCTGCTC | + |
Preference number: 6 (lower is better) Translates to: WWPCSSTPPIPT*QISLRAASLLL Trigger: GAGCAGAAGGGAGGCTGCTCTCAGGGATATTTGTCAGGTAGGAATGGGTGGAGTGGAACTACAGGGCCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |
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CDS TCA 72 bp | TGGGAAGCTACACTTAGCCACAGGAGTGTCATCTCCTaGAGTGACCTCAAGGGATGCACCATCTCATCCCTC | + |
Preference number: 6 (lower is better) Translates to: WEATLSHRSVIS*SDLKGCTISSL Trigger: GAGGGATGAGATGGTGCATCCCTTGAGGTCACTTCAGGAGATGACACTCCTGTGGCTAAGTGTAGCTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565162.2 |