Pregenerated sensors for LINC01303 (Homo sapiens)
Ensembl gene IDs: ENSG00000250548Ensembl transcript IDs: ENST00000508827.1, ENST00000553288.5, ENST00000668001.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGGACCGTAATGCCAGCTGTCCATTCCCTCCACGGGCCCTGTGGTaGCTCCACCTGGGTGGAGAGTCCCTGCTTTCTGCCTTTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GDRNASCPFPPRALW*LHLGGESLLSAFPL Trigger: CAATGGAAAGGCAGAAAGCAGGGACTCTCCACCCAGGTGGAGGCACCACAGGGCCCGTGGAGGGAATGGACAGCTGGCATTACGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | TTCCATGTGACTCCATGGCCAGTGCGACAAATGCATGGCCTTGGCTaGGGAAGCACAGGGGCTGTGGGGATGACTGGATCCCAGGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FHVTPWPVRQMHGLG*GSTGAVGMTGSQVP Trigger: TGGGACCTGGGATCCAGTCATCCCCACAGCCCCTGTGCTTCCTCAGCCAAGGCCATGCATTTGTCGCACTGGCCATGGAGTCACATGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | GGCCCAGGGAGATACTATGTGGCCTCTTCTCCCACCTACCTCTTCTaGGCCACGCTTTCCAGCTGTCAGGCAAGTATCAGGGCACCTACC | + |
|
Preference number: 5 (lower is better) Translates to: GPGRYYVASSPTYLF*ATLSSCQASIRAPT Trigger: GGTAGGTGCCCTGATACTTGCCTGACAGCTGGAAAGCGTGGCTCAGAAGAGGTAGGTGGGAGAAGAGGCCACATAGTATCTCCCTGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | ACACACAGGGGCCCAGGGTCAAGTAGATCAGCAGGAATGTCGGGTTaGGGTGGTCTCACTGCTGACAGAGCCCTGAACAAAAGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: THRGPGSSRSAGMSG*GGLTADRALNKRLW Trigger: CCAGAGCCTTTTGTTCAGGGCTCTGTCAGCAGTGAGACCACCCCAACCCGACATTCCTGCTGATCTACTTGACCCTGGGCCCCTGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | CCTCTCCAGGGAGGGAAATGCCCACTAGCCATATACAGGCTCTTCTaGAAGGGACAGAGGTGGGGACTCCATGGCAGACTCTCCATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PLQGGKCPLAIYRLF*KGQRWGLHGRLSIP Trigger: CGGAATGGAGAGTCTGCCATGGAGTCCCCACCTCTGTCCCTTCCAGAAGAGCCTGTATATGGCTAGTGGGCATTTCCCTCCCTGGAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | TCCAGGGCTTGTGTGAGTACATGGAGGAATCAAGGGAGAGGTGGGTaGGATGGCCACAACCACCCTCCGCGACTCTTCATCCTTGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRACVSTWRNQGRGG*DGHNHPPRLFILEP Trigger: AGGCTCAAGGATGAAGAGTCGCGGAGGGTGGTTGTGGCCATCTCACCCACCTCTCCCTTGATTCCTCCATGTACTCACACAAGCCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | GTTTGGGTAGTTCTCATGTCTAGAAATCTGGATCTGGCCAGGGCCTaGCTCATGATTCCCCTCCTGCATGTGCTGACTCTGCCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VWVVLMSRNLDLARA*LMIPLLHVLTLPSP Trigger: GGGGCTGGGCAGAGTCAGCACATGCAGGAGGGGAATCATGAGCCAGGCCCTGGCCAGATCCAGATTTCTAGACATGAGAACTACCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 90 bp | GGAGGTTGTCGGTTGGCTCTGGTCAAGCGGCTGTTTGGGCATGAGTaGCATTTGTACTCAAGGTCAAGGGGCAGCCTTAGTAGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGCRLALVKRLFGHE*HLYSRSRGSLSRSA Trigger: AGCTGACCTACTAAGGCTGCCCCTTGACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | TCCAGCCTGGGGCTGAGAAACTCACAGGAGGTTGTCGGTTGGCTCTaGTCAAGCGGCTGTTTGGGCATGAGTGCCATTTGTACTCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGLRNSQEVVGWL*SSGCLGMSAICTQG Trigger: ACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCCTGTGAGTTTCTCAGCCCCAGGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | TGCAGATCCAGCCTGGGGCTGAGAAACTCACAGGAGGTTGTCGGTTaGCTCTGGTCAAGCGGCTGTTTGGGCATGAGTGCCATTTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: CRSSLGLRNSQEVVG*LWSSGCLGMSAICT Trigger: AGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCCTGTGAGTTTCTCAGCCCCAGGCTGGATCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | GGAGTCCCTCTGTCAGGAGCTCAGTTGAACTGGGAGAGGGAGCGCTaGGCTGCCAGGTGTCACAATAGTCAATTAAGGCAACAAGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GVPLSGAQLNWERER*AARCHNSQLRQQAQ Trigger: TTGGGCTTGTTGCCTTAATTGACTATTGTGACACCTGGCAGCTCAGCGCTCCCTCTCCCAGTTCAACTGAGCTCCTGACAGAGGGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | CCTCAACATAATGTCTGTCTCTTACCTGCAGATCCAGCCTGGGGCTaGGAAACTCACAGGAGGTTGTCGGTTGGCTCTGGTCAAGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQHNVCLLPADPAWG*ETHRRLSVGSGQAA Trigger: AGCCGCTTGACCAGAGCCAACCGACAACCTCCTGTGAGTTTCTCAGCCCCAGGCTGGATCTGCAGGTAAGAGACAGACATTATGTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | CTCTGCACAGCCCCCAGTGCCACCCGTAAAGATGTCCATTCCAAGTaGAAGCCACTGCACTTCAAAAGCAGCAGAGGTGGGTTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LCTAPSATRKDVHSK*KPLHFKSSRGGFSF Trigger: GAAGGAGAACCCACCTCTGCTGCTTTTGAAGTGCAGTGGCTTTCACTTGGAATGGACATCTTTACGGGTGGCACTGGGGGCTGTGCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | CTGATGGGGGCAGAGCGGGAATGTTGTAACAGCCCTAGATCACCTTaGAAAAATACTGTTTGCCTGCCAGCCCGGAACTGCCATTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LMGAERECCNSPRSP*KNTVCLPARNCHSR Trigger: CCTGGAATGGCAGTTCCGGGCTGGCAGGCAAACAGTATTTTTCCAAGGTGATCTAGGGCTGTTACAACATTCCCGCTCTGCCCCCATCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | CATCAGTCAAGGGAGGGAGGAGAAGAAGCACTTTCCAGTTCATCCTaGAGGGGGTGGAGTTCAGACACTGCTTCTAAGAGCAGTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HQSREGGEEALSSSS*RGWSSDTASKSSPP Trigger: TGGGGGACTGCTCTTAGAAGCAGTGTCTGAACTCCACCCCCTCCAGGATGAACTGGAAAGTGCTTCTTCTCCTCCCTCCCTTGACTGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | CTTAGCTTTCTGAGTGTCAGTGTCCTTGGCCTTCCAGGGCTTGTGTaGGTACATGGAGGAATCAAGGGAGAGGTGGGTGAGATGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSFLSVSVLGLPGLV*VHGGIKGEVGEMAT Trigger: TGTGGCCATCTCACCCACCTCTCCCTTGATTCCTCCATGTACTCACACAAGCCCTGGAAGGCCAAGGACACTGACACTCAGAAAGCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 90 bp | CCCCCAGTGCCACCCGTAAAGATGTCCATTCCAAGTGAAAGCCACTaGACTTCAAAAGCAGCAGAGGTGGGTTCTCCTTCATGTTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPVPPVKMSIPSESH*TSKAAEVGSPSCSL Trigger: CAGGGAACATGAAGGAGAACCCACCTCTGCTGCTTTTGAAGTGCAGTGGCTTTCACTTGGAATGGACATCTTTACGGGTGGCACTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | AGAGCCTTCAACAGAAATGAAGCCCGTCCTTTGAGTGCCTGTCCCTaGCAAGTTGAAGGTGGAGTCCCTCTGTCAGGAGCTCAGTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RAFNRNEARPLSACP*QVEGGVPLSGAQLN Trigger: GTTCAACTGAGCTCCTGACAGAGGGACTCCACCTTCAACTTGCCAGGGACAGGCACTCAAAGGACGGGCTTCATTTCTGTTGAAGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | CTTTCTGTCTCAGAAAGCTGGGCAGGACCAGAGAAAGTGGCTTTGTaGAACGCAGGGACAAAGCTAGCTCAGGGCTCTGCTCTTTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSVSESWAGPEKVAL*NAGTKLAQGSALSQ Trigger: CTGAGAAAGAGCAGAGCCCTGAGCTAGCTTTGTCCCTGCGTTTCACAAAGCCACTTTCTCTGGTCCTGCCCAGCTTTCTGAGACAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | AATCACACACAAGTTTTTCACCAGGAGGCCCAGGGAGATACTATGTaGCCTCTTCTCCCACCTACCTCTTCTGAGCCACGCTTTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: NHTQVFHQEAQGDTM*PLLPPTSSEPRFPA Trigger: AGCTGGAAAGCGTGGCTCAGAAGAGGTAGGTGGGAGAAGAGGCCACATAGTATCTCCCTGGGCCTCCTGGTGAAAAACTTGTGTGTGATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | CCAGGTCCCAGGAGAGATAGCGAGACATGTTGGAAACACTGTGTCTaGAATCTTGTGCTTGACTGCTCAGGAATGCGTGGTCTGGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPRRDSETCWKHCV*NLVLDCSGMRGLGN Trigger: GTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACATGTCTCGCTATCTCTCCTGGGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | CCCCTCTCCCAATCCTTTTGTAATGTACCCACTCCCTTAGCTTTCTaGGTGTCAGTGTCCTTGGCCTTCCAGGGCTTGTGTGAGTACATG | + |
|
Preference number: 5 (lower is better) Translates to: PLSQSFCNVPTPLAF*VSVSLAFQGLCEYM Trigger: CATGTACTCACACAAGCCCTGGAAGGCCAAGGACACTGACACTCAGAAAGCTAAGGGAGTGGGTACATTACAAAAGGATTGGGAGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 90 bp | TCAGACACTGCTTCTAAGAGCAGTCCCCCATCTCTTCACTCACCCTaGTTTATTCCCCAGCCACCCTCACCCTCATTTGATTCCATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SDTASKSSPPSLHSP*FIPQPPSPSFDSIC Trigger: GCAAATGGAATCAAATGAGGGTGAGGGTGGCTGGGGAATAAAGCAGGGTGAGTGAAGAGATGGGGGACTGCTCTTAGAAGCAGTGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | ATCTTGTGCTTGACTGCTCAGGAATGCGTGGTCTGGGTAACTTTCTaGTTTGACTTACAGGAAGGTCTGATGGGGGCAGAGCGGGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: ILCLTAQECVVWVTF*FDLQEGLMGAEREC Trigger: ACATTCCCGCTCTGCCCCCATCAGACCTTCCTGTAAGTCAAACCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | AGTAGAAAGAAGATTCAAGGAGGCAGTCTGGTCATGATCAGAGTTTaGACCCAAAGGTTAGGCCCTGGGTTCCAGTTGGGTGACCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKKIQGGSLVMIRV*TQRLGPGFQLGDLG Trigger: GCCAAGGTCACCCAACTGGAACCCAGGGCCTAACCTTTGGGTTCAAACTCTGATCATGACCAGACTGCCTCCTTGAATCTTCTTTCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | AGGCCATGCTCACTGATGACTCAGGAGAACTGGGGCCTTGAAAGATaGGCTGAGTCAATGAATGTGAGCTGTGGAGTTTTTACCACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPCSLMTQENWGLER*AESMNVSCGVFTTP Trigger: GGGAGTGGTAAAAACTCCACAGCTCACATTCATTGACTCAGCTCATCTTTCAAGGCCCCAGTTCTCCTGAGTCATCAGTGAGCATGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | ACTGTGTCTGGAATCTTGTGCTTGACTGCTCAGGAATGCGTGGTCTaGGTAACTTTCTGGTTTGACTTACAGGAAGGTCTGATGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVSGILCLTAQECVV*VTFWFDLQEGLMGA Trigger: TGCCCCCATCAGACCTTCCTGTAAGTCAAACCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 90 bp | GGAGAGATAGCGAGACATGTTGGAAACACTGTGTCTGGAATCTTGTaGTTGACTGCTCAGGAATGCGTGGTCTGGGTAACTTTCTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GEIARHVGNTVSGIL*LTAQECVVWVTFWF Trigger: AAACCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACATGTCTCGCTATCTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | AATTTCCCTATAGCTACATGGAGCCAATTAAACAGTGGACGGATTTaGAGAGGTGGATCATTTCAGATTCGCTCCTGGATTTTCACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: NFPIATWSQLNSGRI*RGGSFQIRSWIFTP Trigger: GGGGGTGAAAATCCAGGAGCGAATCTGAAATGATCCACCTCTCCAAATCCGTCCACTGTTTAATTGGCTCCATGTAGCTATAGGGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | ACTCACCTCTGTGCGGTTACATTTAAACACCAGTTTAGATCTCAATaGCCCACATTCAGCCTTAGTGACTATGAAAGCAAGGCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: THLCAVTFKHQFRSQ*PTFSLSDYESKAML Trigger: GAGCATGGCCTTGCTTTCATAGTCACTAAGGCTGAATGTGGGTCATTGAGATCTAAACTGGTGTTTAAATGTAACCGCACAGAGGTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | TATAGCTACATGGAGCCAATTAAACAGTGGACGGATTTGGAGAGGTaGATCATTTCAGATTCGCTCCTGGATTTTCACCCCCACTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSYMEPIKQWTDLER*IISDSLLDFHPHLR Trigger: TCTTAAGTGGGGGTGAAAATCCAGGAGCGAATCTGAAATGATCCACCTCTCCAAATCCGTCCACTGTTTAATTGGCTCCATGTAGCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | GTTATGCCTCAATTTCCCTATAGCTACATGGAGCCAATTAAACAGTaGACGGATTTGGAGAGGTGGATCATTTCAGATTCGCTCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VMPQFPYSYMEPIKQ*TDLERWIISDSLLD Trigger: ATCCAGGAGCGAATCTGAAATGATCCACCTCTCCAAATCCGTCCACTGTTTAATTGGCTCCATGTAGCTATAGGGAAATTGAGGCATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | GCGACATACATGACAAAGTCTCGCCCCATTTCCTTATGGCCAAGCTaGATTCAAGACACAATGGTACTTGGGCTACTTCTTTTCTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: ATYMTKSRPISLWPS*IQDTMVLGLLLFYY Trigger: ATAGTAGAAAAGAAGTAGCCCAAGTACCATTGTGTCTTGAATCCAGCTTGGCCATAAGGAAATGGGGCGAGACTTTGTCATGTATGTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668001.1 |
||
| CDS GCA 90 bp | AGGCAACAAGCCCAAAACAAAAGAGTCAAGCTTTCAGTCATGTCCTaGAATGGTATAAGCAAGTATCTGAAACCAGAGAAAGCGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RQQAQNKRVKLSVMS*NGISKYLKPEKAWT Trigger: AGTCCACGCTTTCTCTGGTTTCAGATACTTGCTTATACCATTGCAGGACATGACTGAAAGCTTGACTCTTTTGTTTTGGGCTTGTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 90 bp | TCTACCTGCCTTTGCTCGGTTTCCATTCACTGCCTCTGTTACTTTTaGTTGTTTATGGTTAAGTCCAGTGGTTCTTATCAGCCATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: STCLCSVSIHCLCYF*LFMVKSSGSYQPYL Trigger: CAAGTATGGCTGATAAGAACCACTGGACTTAACCATAAACAACCAAAAGTAACAGAGGCAGTGAATGGAAACCGAGCAAAGGCAGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | TCTTTCTTCTCTCTCTCTTTTGCTCTTTTTCTCCTTGTGTGTGTCTaGCTCACCTCTGTGCGGTTACATTTAAACACCAGTTTAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFFSLSFALFLLVCV*LTSVRLHLNTSLDL Trigger: GAGATCTAAACTGGTGTTTAAATGTAACCGCACAGAGGTGAGTCAGACACACACAAGGAGAAAAAGAGCAAAAGAGAGAGAGAAGAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 90 bp | TCTAAGTCGAATCTCATTTTCTTCTTTGATGGTTCCTGGACTGGTTaGTCAAGGATAGGTGAACATTTTTGCATAGCTGAACTTCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SKSNLIFFFDGSWTG*SRIGEHFCIAELQR Trigger: TCGCTGAAGTTCAGCTATGCAAAAATGTTCACCTATCCTTGATCAACCAGTCCAGGAACCATCAAAGAAGAAAATGAGATTCGACTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000508827.1 ENST00000553288.5 ENST00000668001.1 |
||
| CDS GCA 72 bp | CCCCAGGCTCCATGGGAGGCAGGCAGCTGTGCCGGCTaGAGCGATGTGAACGGGGAAGCCGAGAGGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PQAPWEAGSCAG*SDVNGEAERRV Trigger: CACCCTCCTCTCGGCTTCCCCGTTCACATCGCTGCAGCCGGCACAGCTGCCTGCCTCCCATGGAGCCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | AATGCCAGCTGTCCATTCCCTCCACGGGCCCTGTGGTaGCTCCACCTGGGTGGAGAGTCCCTGCTTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NASCPFPPRALW*LHLGGESLLSA Trigger: GGCAGAAAGCAGGGACTCTCCACCCAGGTGGAGGCACCACAGGGCCCGTGGAGGGAATGGACAGCTGGCATT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | GAGAGACCTGAGACCTTGAGAGCTCCCTCCAGAGACTaGCACGCATGGGCTGTGCCCCAAGTCTGGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: ERPETLRAPSRD*HAWAVPQVWGR Trigger: CCTACCCCAGACTTGGGGCACAGCCCATGCGTGGCAGTCTCTGGAGGGAGCTCTCAAGGTCTCAGGTCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | AGATGGCCACAACCACCCTCCGCGACTCTTCATCCTTaGGCCTTTAGGACAGGTGCCCCCAGGCTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWPQPPSATLHP*AFRTGAPRLHG Trigger: CCCATGGAGCCTGGGGGCACCTGTCCTAAAGGCTCAAGGATGAAGAGTCGCGGAGGGTGGTTGTGGCCATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | ATTCCCTCCACGGGCCCTGTGGTGCCTCCACCTGGGTaGAGAGTCCCTGCTTTCTGCCTTTCCATTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IPSTGPVVPPPG*RVPAFCLSIGQ Trigger: TTGGCCAATGGAAAGGCAGAAAGCAGGGACTCTCCACCCAGGTGGAGGCACCACAGGGCCCGTGGAGGGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | GTGATGACTACGACCAGCCAGAGAGACCTGAGACCTTaGGAGCTCCCTCCAGAGACTGCCACGCATGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VMTTTSQRDLRP*ELPPETATHGL Trigger: CAGCCCATGCGTGGCAGTCTCTGGAGGGAGCTCTCAAGGTCTCAGGTCTCTCTGGCTGGTCGTAGTCATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | AGCCTGGGGCTGAGAAACTCACAGGAGGTTGTCGGTTaGCTCTGGTCAAGCGGCTGTTTGGGCATGAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGLRNSQEVVG*LWSSGCLGMSA Trigger: GGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCCTGTGAGTTTCTCAGCCCCAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | AAGTTGAAGGTGGAGTCCCTCTGTCAGGAGCTCAGTTaGACTGGGAGAGGGAGCGCTGAGCTGCCAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLKVESLCQELS*TGRGSAELPGV Trigger: GACACCTGGCAGCTCAGCGCTCCCTCTCCCAGTTCAACTGAGCTCCTGACAGAGGGACTCCACCTTCAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | CACCTGGGTGGAGAGTCCCTGCTTTCTGCCTTTCCATaGGCCAATCTCTGGCCTCCTCCTGAGGTTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLGGESLLSAFP*ANLWPPPEVAA Trigger: AGCAGCAACCTCAGGAGGAGGCCAGAGATTGGCCAATGGAAAGGCAGAAAGCAGGGACTCTCCACCCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | CTGCAGATCCAGCCTGGGGCTGAGAAACTCACAGGAGGTTGTCGGTaGGCTCTGGTCAAGCGGCTGTTTGGGCATGAGTGCCATTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LQIQPGAEKLTGGCR*ALVKRLFGHECHLY Trigger: GTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCCTGTGAGTTTCTCAGCCCCAGGCTGGATCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | GGCCCAGGGTCAAGTAGATCAGCAGGAATGTCGGGTTaGGGTGGTCTCACTGCTGACAGAGCCCTGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: GPGSSRSAGMSG*GGLTADRALNK Trigger: TTTGTTCAGGGCTCTGTCAGCAGTGAGACCACCCCAACCCGACATTCCTGCTGATCTACTTGACCCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | GGAGGGAAATGCCCACTAGCCATATACAGGCTCTTCTaGAAGGGACAGAGGTGGGGACTCCATGGCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: GGKCPLAIYRLF*KGQRWGLHGRL Trigger: GAGTCTGCCATGGAGTCCCCACCTCTGTCCCTTCCAGAAGAGCCTGTATATGGCTAGTGGGCATTTCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | TTGGGACAGGAGCCAGCTCTAAGTAACCTCCTACAGGTGATGGTTTaGGCTTCACCTGTTGGCCAGAGCCCTCCAGCAGAGAGGGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LGQEPALSNLLQVMV*ASPVGQSPPAERGN Trigger: ATTCCCCCTCTCTGCTGGAGGGCTCTGGCCAACAGGTGAAGCCAAAACCATCACCTGTAGGAGGTTACTTAGAGCTGGCTCCTGTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | TGCTTTCTGCCTTTCCATTGGCCAATCTCTGGCCTCCTCCTGAGGTaGCTGCTGTCCCTGGAACAGCTTTGGGCTAGTGGACACAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CFLPFHWPISGLLLR*LLSLEQLWASGHSS Trigger: ACTGCTGTGTCCACTAGCCCAAAGCTGTTCCAGGGACAGCAGCAACCTCAGGAGGAGGCCAGAGATTGGCCAATGGAAAGGCAGAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | TGTGTGAGTACATGGAGGAATCAAGGGAGAGGTGGGTaGGATGGCCACAACCACCCTCCGCGACTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: CVSTWRNQGRGG*DGHNHPPRLFI Trigger: GATGAAGAGTCGCGGAGGGTGGTTGTGGCCATCTCACCCACCTCTCCCTTGATTCCTCCATGTACTCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | TTGTCGGTTGGCTCTGGTCAAGCGGCTGTTTGGGCATaGGTGCCATTTGTACTCAAGGTCAAGGGGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSVGSGQAAVWA*VPFVLKVKGQP Trigger: AGGCTGCCCCTTGACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | GCCCCCAGTGCCACCCGTAAAGATGTCCATTCCAAGTaGAAGCCACTGCACTTCAAAAGCAGCAGAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APSATRKDVHSK*KPLHFKSSRGG Trigger: CCCACCTCTGCTGCTTTTGAAGTGCAGTGGCTTTCACTTGGAATGGACATCTTTACGGGTGGCACTGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | CGGTTGGCTCTGGTCAAGCGGCTGTTTGGGCATGAGTaGCATTTGTACTCAAGGTCAAGGGGCAGCCTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RLALVKRLFGHE*HLYSRSRGSLS Trigger: ACTAAGGCTGCCCCTTGACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | CAAGTTTTTCACCAGGAGGCCCAGGGAGATACTATGTaGCCTCTTCTCCCACCTACCTCTTCTGAGCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: QVFHQEAQGDTM*PLLPPTSSEPR Trigger: GCGTGGCTCAGAAGAGGTAGGTGGGAGAAGAGGCCACATAGTATCTCCCTGGGCCTCCTGGTGAAAAACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | GGGCTGAGAAACTCACAGGAGGTTGTCGGTTGGCTCTaGTCAAGCGGCTGTTTGGGCATGAGTGCCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLRNSQEVVGWL*SSGCLGMSAIC Trigger: ACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCCTGTGAGTTTCTCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | GAGCCAGCTCTAAGTAACCTCCTACAGGTGATGGTTTaGGCTTCACCTGTTGGCCAGAGCCCTCCAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EPALSNLLQVMV*ASPVGQSPPAE Trigger: CTCTGCTGGAGGGCTCTGGCCAACAGGTGAAGCCAAAACCATCACCTGTAGGAGGTTACTTAGAGCTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | CAGGAGGTTGTCGGTTGGCTCTGGTCAAGCGGCTGTTaGGGCATGAGTGCCATTTGTACTCAAGGTCAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QEVVGWLWSSGC*GMSAICTQGQG Trigger: CCCTTGACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | TGTCGGTTGGCTCTGGTCAAGCGGCTGTTTGGGCATGAGTGCCATTaGTACTCAAGGTCAAGGGGCAGCCTTAGTAGGTCAGCTGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CRLALVKRLFGHECH*YSRSRGSLSRSAGR Trigger: TCTTCCAGCTGACCTACTAAGGCTGCCCCTTGACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | AAGCCAGAGCCTTCAACAGAAATGAAGCCCGTCCTTTaGGTGCCTGTCCCTGGCAAGTTGAAGGTGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KPEPSTEMKPVL*VPVPGKLKVES Trigger: GGACTCCACCTTCAACTTGCCAGGGACAGGCACTCAAAGGACGGGCTTCATTTCTGTTGAAGGCTCTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | TGCTCAGGAATGCGTGGTCTGGGTAACTTTCTGGTTTaGCTTACAGGAAGGTCTGATGGGGGCAGAGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSGMRGLGNFLV*LTGRSDGGRAG Trigger: TCCCGCTCTGCCCCCATCAGACCTTCCTGTAAGTCAAACCAGAAAGTTACCCAGACCACGCATTCCTGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | CCTTGGAAAAATACTGTTTGCCTGCCAGCCCGGAACTaGCATTCCAGGAAGCAGCTGCTGGTGAATCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PWKNTVCLPARN*HSRKQLLVNQQ Trigger: CTGCTGATTCACCAGCAGCTGCTTCCTGGAATGGCAGTTCCGGGCTGGCAGGCAAACAGTATTTTTCCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | AACAGAAATGAAGCCCGTCCTTTGAGTGCCTGTCCCTaGCAAGTTGAAGGTGGAGTCCCTCTGTCAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: NRNEARPLSACP*QVEGGVPLSGA Trigger: AGCTCCTGACAGAGGGACTCCACCTTCAACTTGCCAGGGACAGGCACTCAAAGGACGGGCTTCATTTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | AGGGAGGGAGGAGAAGAAGCACTTTCCAGTTCATCCTaGAGGGGGTGGAGTTCAGACACTGCTTCTAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: REGGEEALSSSS*RGWSSDTASKS Trigger: GCTCTTAGAAGCAGTGTCTGAACTCCACCCCCTCCAGGATGAACTGGAAAGTGCTTCTTCTCCTCCCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | GAAGCCAGAGCCTTCAACAGAAATGAAGCCCGTCCTTaGAGTGCCTGTCCCTGGCAAGTTGAAGGTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EARAFNRNEARP*SACPWQVEGGV Trigger: GACTCCACCTTCAACTTGCCAGGGACAGGCACTCAAAGGACGGGCTTCATTTCTGTTGAAGGCTCTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | GCTCTGGTCAAGCGGCTGTTTGGGCATGAGTGCCATTaGTACTCAAGGTCAAGGGGCAGCCTTAGTAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALVKRLFGHECH*YSRSRGSLSRS Trigger: TGACCTACTAAGGCTGCCCCTTGACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | AGAAACTCACAGGAGGTTGTCGGTTGGCTCTGGTCAAGCGGCTGTTaGGGCATGAGTGCCATTTGTACTCAAGGTCAAGGGGCAGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RNSQEVVGWLWSSGC*GMSAICTQGQGAAL Trigger: TAAGGCTGCCCCTTGACCTTGAGTACAAATGGCACTCATGCCCAAACAGCCGCTTGACCAGAGCCAACCGACAACCTCCTGTGAGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | CTGTCAGGAGCTCAGTTGAACTGGGAGAGGGAGCGCTaGGCTGCCAGGTGTCACAATAGTCAATTAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSGAQLNWERER*AARCHNSQLRQ Trigger: TTGCCTTAATTGACTATTGTGACACCTGGCAGCTCAGCGCTCCCTCTCCCAGTTCAACTGAGCTCCTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | CTAGCCCACCAGCTGATTCTAACATCTGCTCAAGTCTaGGAACCCCTGGTCTCACCTCTCTCTCCAGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAHQLILTSAQV*EPLVSPLSPVR Trigger: CCTAACTGGAGAGAGAGGTGAGACCAGGGGTTCTCAGACTTGAGCAGATGTTAGAATCAGCTGGTGGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | GCTTCTAAGAGCAGTCCCCCATCTCTTCACTCACCCTaGTTTATTCCCCAGCCACCCTCACCCTCATTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: ASKSSPPSLHSP*FIPQPPSPSFD Trigger: ATCAAATGAGGGTGAGGGTGGCTGGGGAATAAAGCAGGGTGAGTGAAGAGATGGGGGACTGCTCTTAGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | GCAGAGCGGGAATGTTGTAACAGCCCTAGATCACCTTaGAAAAATACTGTTTGCCTGCCAGCCCGGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: AERECCNSPRSP*KNTVCLPARNC Trigger: GCAGTTCCGGGCTGGCAGGCAAACAGTATTTTTCCAAGGTGATCTAGGGCTGTTACAACATTCCCGCTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | CTCCAGTTAGGCTACAGCCTCCTAGAAAGTACTGACTaGAGAGGGCTTAGTGTAGTCCTGGGCACCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LQLGYSLLESTD*RGLSVVLGTQG Trigger: TCCTTGGGTGCCCAGGACTACACTAAGCCCTCTCAAGTCAGTACTTTCTAGGAGGCTGTAGCCTAACTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | ATATTAGGAGAAGCCAGAGCCTTCAACAGAAATGAAGCCCGTCCTTaGAGTGCCTGTCCCTGGCAAGTTGAAGGTGGAGTCCCTCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ILGEARAFNRNEARP*SACPWQVEGGVPLS Trigger: TGACAGAGGGACTCCACCTTCAACTTGCCAGGGACAGGCACTCAAAGGACGGGCTTCATTTCTGTTGAAGGCTCTGGCTTCTCCTAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | TTGACTGCTCAGGAATGCGTGGTCTGGGTAACTTTCTaGTTTGACTTACAGGAAGGTCTGATGGGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LTAQECVVWVTF*FDLQEGLMGAE Trigger: CTCTGCCCCCATCAGACCTTCCTGTAAGTCAAACCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | GAAGATTCAAGGAGGCAGTCTGGTCATGATCAGAGTTaGAACCCAAAGGTTAGGCCCTGGGTTCCAGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EDSRRQSGHDQS*NPKVRPWVPVG Trigger: CCCAACTGGAACCCAGGGCCTAACCTTTGGGTTCAAACTCTGATCATGACCAGACTGCCTCCTTGAATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | CCAGGAGAGATAGCGAGACATGTTGGAAACACTGTGTCTGGAATCTaGTGCTTGACTGCTCAGGAATGCGTGGTCTGGGTAACTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGEIARHVGNTVSGI*CLTAQECVVWVTFW Trigger: CCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACATGTCTCGCTATCTCTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | AAGATTCAAGGAGGCAGTCTGGTCATGATCAGAGTTTaGACCCAAAGGTTAGGCCCTGGGTTCCAGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KIQGGSLVMIRV*TQRLGPGFQLG Trigger: ACCCAACTGGAACCCAGGGCCTAACCTTTGGGTTCAAACTCTGATCATGACCAGACTGCCTCCTTGAATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | TGGCCAGAGCCCTCCAGCAGAGAGGGGGAATTTATATaGTACTGTGAAACTTCTAGATACACCCGAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPEPSSREGEFI*YCETSRYTRSQ Trigger: CTGACTTCGGGTGTATCTAGAAGTTTCACAGTAGCATATAAATTCCCCCTCTCTGCTGGAGGGCTCTGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | CCACATTCAGCCTTAGTGACTATGAAAGCAAGGCCATaGTCACTGATGACTCAGGAGAACTGGGGCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PHSALVTMKARP*SLMTQENWGLE Trigger: TTCAAGGCCCCAGTTCTCCTGAGTCATCAGTGAGCATGGCCTTGCTTTCATAGTCACTAAGGCTGAATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | CCACCCGTAAAGATGTCCATTCCAAGTGAAAGCCACTaGACTTCAAAAGCAGCAGAGGTGGGTTCTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPVKMSIPSESH*TSKAAEVGSPS Trigger: TGAAGGAGAACCCACCTCTGCTGCTTTTGAAGTGCAGTGGCTTTCACTTGGAATGGACATCTTTACGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | AAGTATCAGGGCACCTACCTCTGCACAGAAGGGCAGTaGCTTTCTCCAGGTGGAAATCGCTTTTCATCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: KYQGTYLCTEGQ*LSPGGNRFSSK Trigger: TTTGGATGAAAAGCGATTTCCACCTGGAGAAAGTCACTGCCCTTCTGTGCAGAGGTAGGTGCCCTGATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | TGTGTTTTAACTAGCCCACCAGCTGATTCTAACATCTaGTCAAGTCTGAGAACCCCTGGTCTCACCTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CVLTSPPADSNI*SSLRTPGLTSL Trigger: GAGAGAGGTGAGACCAGGGGTTCTCAGACTTGAGCAGATGTTAGAATCAGCTGGTGGGCTAGTTAAAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | GGAATCTTGTGCTTGACTGCTCAGGAATGCGTGGTCTaGGTAACTTTCTGGTTTGACTTACAGGAAGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GILCLTAQECVV*VTFWFDLQEGL Trigger: CAGACCTTCCTGTAAGTCAAACCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | AGGAGAGATAGCGAGACATGTTGGAAACACTGTGTCTaGAATCTTGTGCTTGACTGCTCAGGAATGCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RRDSETCWKHCV*NLVLDCSGMRG Trigger: ACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACATGTCTCGCTATCTCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | ATGACAAAGTCTCGCCCCATTTCCTTATGGCCAAGCTaGATTCAAGACACAATGGTACTCTGCACAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: MTKSRPISLWPS*IQDTMVLCTEG Trigger: CCCTTCTGTGCAGAGTACCATTGTGTCTTGAATCCAGCTTGGCCATAAGGAAATGGGGCGAGACTTTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553288.5 |
||
| CDS CAA 72 bp | ATAGCGAGACATGTTGGAAACACTGTGTCTGGAATCTaGTGCTTGACTGCTCAGGAATGCGTGGTCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: IARHVGNTVSGI*CLTAQECVVWV Trigger: TACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACATGTCTCGCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | GAGATAGCGAGACATGTTGGAAACACTGTGTCTGGAATCTTGTGCTaGACTGCTCAGGAATGCGTGGTCTGGGTAACTTTCTGGTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EIARHVGNTVSGILC*TAQECVVWVTFWFD Trigger: GTCAAACCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACATGTCTCGCTATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | TTGCCCGGAAGGGATGAGGAAAGTGGAACCAAGGATTTTTATTGTTaGTGTTTCCCACCACTGTCTGTCTCAGAGGCAGAACCTGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPGRDEESGTKDFYC*CFPPLSVSEAEPEK Trigger: CTTCTCAGGTTCTGCCTCTGAGACAGACAGTGGTGGGAAACACAAACAATAAAAATCCTTGGTTCCACTTTCCTCATCCCTTCCGGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | GAGGCCCAGGGAGAAAATCACGTTAGGCCAAGAATTTaGCATCAGTCTAGTCAACAGAGCGAAACCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: EAQGENHVRPRI*HQSSQQSETSS Trigger: AGATGAGGTTTCGCTCTGTTGACTAGACTGATGTCAAATTCTTGGCCTAACGTGATTTTCTCCCTGGGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | TGTTGGAAACACTGTGTCTGGAATCTTGTGCTTGACTaGTCAGGAATGCGTGGTCTGGGTAACTTTCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: CWKHCVWNLVLD*SGMRGLGNFLV Trigger: AACCAGAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | GTGACCTTGGCCAAGTCACTTACTTTTCAGACTCTCTaGTTCCTCCTCAGTAAAGTAGATGGAAGAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTLAKSLTFQTL*FLLSKVDGRTG Trigger: CCCAGTTCTTCCATCTACTTTACTGAGGAGGAACCAGAGAGTCTGAAAAGTAAGTGACTTGGCCAAGGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | ATGGAGCCAATTAAACAGTGGACGGATTTGGAGAGGTaGATCATTTCAGATTCGCTCCTGGATTTTCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: MEPIKQWTDLER*IISDSLLDFHP Trigger: GGGGTGAAAATCCAGGAGCGAATCTGAAATGATCCACCTCTCCAAATCCGTCCACTGTTTAATTGGCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | AGACATGTTGGAAACACTGTGTCTGGAATCTTGTGCTaGACTGCTCAGGAATGCGTGGTCTGGGTAACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RHVGNTVSGILC*TAQECVVWVTF Trigger: GAAAGTTACCCAGACCACGCATTCCTGAGCAGTCAAGCACAAGATTCCAGACACAGTGTTTCCAACATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | CAATTTCCCTATAGCTACATGGAGCCAATTAAACAGTGGACGGATTaGGAGAGGTGGATCATTTCAGATTCGCTCCTGGATTTTCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: QFPYSYMEPIKQWTD*ERWIISDSLLDFHP Trigger: GGGGTGAAAATCCAGGAGCGAATCTGAAATGATCCACCTCTCCAAATCCGTCCACTGTTTAATTGGCTCCATGTAGCTATAGGGAAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | TCACTGATGACTCAGGAGAACTGGGGCCTTGAAAGATaGGCTGAGTCAATGAATGTGAGCTGTGGAGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLMTQENWGLER*AESMNVSCGVF Trigger: AAAAACTCCACAGCTCACATTCATTGACTCAGCTCATCTTTCAAGGCCCCAGTTCTCCTGAGTCATCAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | AATGGTATAAGCAAGTATCTGAAACCAGAGAAAGCGTaGACTCTCCCTGTTCCATTTCCCCCATGGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: NGISKYLKPEKA*TLPVPFPPWNT Trigger: TGTGTTCCATGGGGGAAATGGAACAGGGAGAGTCCACGCTTTCTCTGGTTTCAGATACTTGCTTATACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | ATGACAAAGTCTCGCCCCATTTCCTTATGGCCAAGCTaGATTCAAGACACAATGGTACTTGGGCTACTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: MTKSRPISLWPS*IQDTMVLGLLL Trigger: AAGAAGTAGCCCAAGTACCATTGTGTCTTGAATCCAGCTTGGCCATAAGGAAATGGGGCGAGACTTTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668001.1 |
||
| CDS TCA 72 bp | GAACATTTTTGCATAGCTGAACTTCAGCGACATACATaGCAAAGTCTCGCCCCATTTCCTTATGGCCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: EHFCIAELQRHT*QSLAPFPYGQA Trigger: AGCTTGGCCATAAGGAAATGGGGCGAGACTTTGTCATGTATGTCGCTGAAGTTCAGCTATGCAAAAATGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000508827.1 ENST00000553288.5 ENST00000668001.1 |
||
| CDS TCA 72 bp | CCATGTGTTAATTGCTACAGACCAGAACTGTCTTCCTaGAAGTTGTCCAGGGCTCTTGCTACTCAAATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PCVNCYRPELSS*KLSRALATQIV Trigger: CACAATTTGAGTAGCAAGAGCCCTGGACAACTTTCAGGAAGACAGTTCTGGTCTGTAGCAATTAACACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553288.5 |
||
| CDS CCA 72 bp | ACACAGCAGTTATGCCTCAATTTCCCTATAGCTACATaGAGCCAATTAAACAGTGGACGGATTTGGAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TQQLCLNFPIAT*SQLNSGRIWRG Trigger: ACCTCTCCAAATCCGTCCACTGTTTAATTGGCTCCATGTAGCTATAGGGAAATTGAGGCATAACTGCTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 90 bp | ACCTGCCTTTGCTCGGTTTCCATTCACTGCCTCTGTTACTTTTGGTaGTTTATGGTTAAGTCCAGTGGTTCTTATCAGCCATACTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TCLCSVSIHCLCYFW*FMVKSSGSYQPYLE Trigger: TTCCAAGTATGGCTGATAAGAACCACTGGACTTAACCATAAACAACCAAAAGTAACAGAGGCAGTGAATGGAAACCGAGCAAAGGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | CAATTTCCCTATAGCTACATGGAGCCAATTAAACAGTaGACGGATTTGGAGAGGTGGATCATTTCAGATTCG | + |
|
Preference number: 6 (lower is better) Translates to: QFPYSYMEPIKQ*TDLERWIISDS Trigger: CGAATCTGAAATGATCCACCTCTCCAAATCCGTCCACTGTTTAATTGGCTCCATGTAGCTATAGGGAAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CAA 72 bp | TGCTCGGTTTCCATTCACTGCCTCTGTTACTTTTGGTaGTTTATGGTTAAGTCCAGTGGTTCTTATCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSVSIHCLCYFW*FMVKSSGSYQP Trigger: TGGCTGATAAGAACCACTGGACTTAACCATAAACAACCAAAAGTAACAGAGGCAGTGAATGGAAACCGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | CTTTGCTCGGTTTCCATTCACTGCCTCTGTTACTTTTaGTTGTTTATGGTTAAGTCCAGTGGTTCTTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCSVSIHCLCYF*LFMVKSSGSYQ Trigger: CTGATAAGAACCACTGGACTTAACCATAAACAACCAAAAGTAACAGAGGCAGTGAATGGAAACCGAGCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS GCA 72 bp | GCCCAAAACAAAAGAGTCAAGCTTTCAGTCATGTCCTaGAATGGTATAAGCAAGTATCTGAAACCAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AQNKRVKLSVMS*NGISKYLKPEK Trigger: TTTCTCTGGTTTCAGATACTTGCTTATACCATTGCAGGACATGACTGAAAGCTTGACTCTTTTGTTTTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | AAACAAAAGAGTCAAGCTTTCAGTCATGTCCTGCAATaGTATAAGCAAGTATCTGAAACCAGAGAAAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: KQKSQAFSHVLQ*YKQVSETRESV Trigger: CACGCTTTCTCTGGTTTCAGATACTTGCTTATACCATTGCAGGACATGACTGAAAGCTTGACTCTTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS CCA 72 bp | CTTATGGCCAAGCTGGATTCAAGACACAATGGTACTTaGGCTACTTCTTTTCTACTATTTAATCTTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LMAKLDSRHNGT*ATSFLLFNLLG Trigger: TCCCAGAAGATTAAATAGTAGAAAAGAAGTAGCCCAAGTACCATTGTGTCTTGAATCCAGCTTGGCCATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668001.1 |
||
| CDS CCA 72 bp | TTATGGTTAAGTCCAGTGGTTCTTATCAGCCATACTTaGAAACTTGTTAGAAGTACAAATTCTCAGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LWLSPVVLISHT*KLVRSTNSQTP Trigger: TGGGGTCTGAGAATTTGTACTTCTAACAAGTTTCCAAGTATGGCTGATAAGAACCACTGGACTTAACCATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508827.1 |
||
| CDS TCA 72 bp | AATCTCATTTTCTTCTTTGATGGTTCCTGGACTGGTTaGTCAAGGATAGGTGAACATTTTTGCATAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NLIFFFDGSWTG*SRIGEHFCIAE Trigger: TTCAGCTATGCAAAAATGTTCACCTATCCTTGATCAACCAGTCCAGGAACCATCAAAGAAGAAAATGAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000508827.1 ENST00000553288.5 ENST00000668001.1 |
||
| CDS GCA 72 bp | GGATTATACGAAGCATTCAATGAGAATAGGCAGAATTaGAGAACAATTATTGAAGCAGTAATTTATGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLYEAFNENRQN*RTIIEAVIYEH Trigger: GTGCTCATAAATTACTGCTTCAATAATTGTTCTGCAATTCTGCCTATTCTCATTGAATGCTTCGTATAATCC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668001.1 |
||