Pregenerated sensors for LINC01290 (Homo sapiens)

Ensembl gene IDs: ENSG00000260468

Ensembl transcript IDs: ENST00000566787.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	TACAAGTCAGTCAGCTTCTTTAAACTCAGAGTCCAGAGCTCTTCCTaGGCTGTGTTCTTAATTCCAGAGCTTCAGTTCTGCTTAGAGCCC	+
Preference number: 6 (lower is better) Translates to: YKSVSFFKLRVQSSS*AVFLIPELQFCLEP Trigger: GGGCTCTAAGCAGAACTGAAGCTCTGGAATTAAGAACACAGCCAAGGAAGAGCTCTGGACTCTGAGTTTAAAGAAGCTGACTGACTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566787.1
CDS CCA 72 bp	AGAGCTTCAGTTCTGCTTAGAGCCCAACATCCTTGCTaGCGGATTTTCTCATCAAGCAAAATGTTCCCTACT	+
Preference number: 6 (lower is better) Translates to: RASVLLRAQHPC*RIFSSSKMFPT Trigger: AGTAGGGAACATTTTGCTTGATGAGAAAATCCGCCAGCAAGGATGTTGGGCTCTAAGCAGAACTGAAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566787.1
CDS CAA 90 bp	CAGTTGCTTTTGATTCTTAACTTGATTCACCAATCTTACCTGGAATaGCCTTACAAGTCAGTCAGCTTCTTTAAACTCAGAGTCCAGAGC	+
Preference number: 6 (lower is better) Translates to: QLLLILNLIHQSYLE*PYKSVSFFKLRVQS Trigger: GCTCTGGACTCTGAGTTTAAAGAAGCTGACTGACTTGTAAGGCAATTCCAGGTAAGATTGGTGAATCAAGTTAAGAATCAAAAGCAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566787.1
CDS CAA 72 bp	TTGATTCTTAACTTGATTCACCAATCTTACCTGGAATaGCCTTACAAGTCAGTCAGCTTCTTTAAACTCAGA	+
Preference number: 6 (lower is better) Translates to: LILNLIHQSYLE*PYKSVSFFKLR Trigger: TCTGAGTTTAAAGAAGCTGACTGACTTGTAAGGCAATTCCAGGTAAGATTGGTGAATCAAGTTAAGAATCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566787.1

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