Pregenerated sensors for LINC01289 (Homo sapiens)
Ensembl gene IDs: ENSG00000253734Ensembl transcript IDs: ENST00000519550.1, ENST00000653366.1, ENST00000657029.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTCTGGACTCCTGCCAATGTTGTGTGACCTGTGGCATGTGGCTGTaGATGAGGGACGGTGCCTTCTTGAGCACCGGCACATCTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GLDSCQCCVTCGMWL*MRDGAFLSTGTSSP Trigger: GGGAGAAGATGTGCCGGTGCTCAAGAAGGCACCGTCCCTCATGCACAGCCACATGCCACAGGTCACACAACATTGGCAGGAGTCCAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS GCA 90 bp | CCAATGTTGTGTGACCTGTGGCATGTGGCTGTGCATGAGGGACGGTaGCTTCTTGAGCACCGGCACATCTTCTCCCAGCATCATTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PMLCDLWHVAVHEGR*LLEHRHIFSQHHCQ Trigger: CTGACAATGATGCTGGGAGAAGATGTGCCGGTGCTCAAGAAGGCACCGTCCCTCATGCACAGCCACATGCCACAGGTCACACAACATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS CCA 90 bp | ATAACTCCTGTCCCTGTCATACCTAGCTCGGAACTAGCACAGGCCTaGGCCTACAGGTCTGTCTGTCACCAGACCCAGTTGGAGGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: ITPVPVIPSSELAQA*AYRSVCHQTQLEGV Trigger: TACTCCCTCCAACTGGGTCTGGTGACAGACAGACCTGTAGGCCCAGGCCTGTGCTAGTTCCGAGCTAGGTATGACAGGGACAGGAGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS TCA 90 bp | CCCAGCATCATTGTCAGGCAGGGATCACTCTTGCTGTCCTGGAGATaGGGTGTACTTCTTGACTTTCACATTGCTACCCCATTGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PSIIVRQGSLLLSWR*GVLLDFHIATPLAP Trigger: AGGAGCCAATGGGGTAGCAATGTGAAAGTCAAGAAGTACACCTCATCTCCAGGACAGCAAGAGTGATCCCTGCCTGACAATGATGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS GCA 90 bp | CCGGCACATCTTCTCCCAGCATCATTGTCAGGCAGGGATCACTCTTaGTGTCCTGGAGATGAGGTGTACTTCTTGACTTTCACATTGCTA | + |
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Preference number: 5 (lower is better) Translates to: PAHLLPASLSGRDHS*CPGDEVYFLTFTLL Trigger: TAGCAATGTGAAAGTCAAGAAGTACACCTCATCTCCAGGACAGCAAGAGTGATCCCTGCCTGACAATGATGCTGGGAGAAGATGTGCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS GCA 90 bp | CTCAAAGTGTTGATGAGAATTTCCAGGTGTAGGGTGGAGGGTTGGTaGTTACTTTCTCAGGTCACCCGTGTCTCTAAAGGACTGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LKVLMRISRCRVEGW*LLSQVTRVSKGLLL Trigger: CAGAAGCAGTCCTTTAGAGACACGGGTGACCTGAGAAAGTAAGCACCAACCCTCCACCCTACACCTGGAAATTCTCATCAACACTTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CCA 90 bp | AGTGTGACATTTGAGGGGCACAAAATGATGCCCACAAGCTGTCTATaGAGGAAGTCAAGTCTGGGTGGGAAGTACTGGCATATAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SVTFEGHKMMPTSCL*RKSSLGGKYWHIAE Trigger: CTCTGCTATATGCCAGTACTTCCCACCCAGACTTGACTTCCTCCATAGACAGCTTGTGGGCATCATTTTGTGCCCCTCAAATGTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CCA 90 bp | GCTTCTGCTGAATTAGTCCACTTTGCAGGTGATCATTCCATCCTTTaGCACCATCTCTGTTCCATACCTTTTCAACCCTCCTGCCTCACC | + |
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Preference number: 5 (lower is better) Translates to: ASAELVHFAGDHSIL*HHLCSIPFQPSCLT Trigger: GGTGAGGCAGGAGGGTTGAAAAGGTATGGAACAGAGATGGTGCCAAAGGATGGAATGATCACCTGCAAAGTGGACTAATTCAGCAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS GCA 90 bp | TACAATATGCTCAGGTGGCTACTGTCAGTCTCAGCAGTTGGGTTCTaGCAAAGACAGGGTGTCTGGGAATTCAGAGAACTCCATATGGAA | + |
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Preference number: 5 (lower is better) Translates to: YNMLRWLLSVSAVGF*QRQGVWEFRELHME Trigger: TTCCATATGGAGTTCTCTGAATTCCCAGACACCCTGTCTTTGGCAGAACCCAACTGCTGAGACTGACAGTAGCCACCTGAGCATATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CCA 90 bp | GTACTCAAAGTGTTGATGAGAATTTCCAGGTGTAGGGTGGAGGGTTaGTGCTTACTTTCTCAGGTCACCCGTGTCTCTAAAGGACTGCTT | + |
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Preference number: 5 (lower is better) Translates to: VLKVLMRISRCRVEG*CLLSQVTRVSKGLL Trigger: AAGCAGTCCTTTAGAGACACGGGTGACCTGAGAAAGTAAGCACCAACCCTCCACCCTACACCTGGAAATTCTCATCAACACTTTGAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CCA 90 bp | TACAACATACAATATGCTCAGGTGGCTACTGTCAGTCTCAGCAGTTaGGTTCTGCCAAAGACAGGGTGTCTGGGAATTCAGAGAACTCCA | + |
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Preference number: 5 (lower is better) Translates to: YNIQYAQVATVSLSS*VLPKTGCLGIQRTP Trigger: TGGAGTTCTCTGAATTCCCAGACACCCTGTCTTTGGCAGAACCCAACTGCTGAGACTGACAGTAGCCACCTGAGCATATTGTATGTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CCA 90 bp | CATGCGCTTGAGGTTGAATCACTTACAACATACAATATGCTCAGGTaGCTACTGTCAGTCTCAGCAGTTGGGTTCTGCCAAAGACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: HALEVESLTTYNMLR*LLSVSAVGFCQRQG Trigger: ACCCTGTCTTTGGCAGAACCCAACTGCTGAGACTGACAGTAGCCACCTGAGCATATTGTATGTTGTAAGTGATTCAACCTCAAGCGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS TCA 90 bp | TGCCAAACGTGCCTTGCTCACCCAAGGCTGTTATTAATAAGTTGCTaGCACATAGTCACAGAACTTATTGCTGATGCACCAGGCCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: CQTCLAHPRLLLISC*HIVTELIADAPGLR Trigger: ACGAAGGCCTGGTGCATCAGCAATAAGTTCTGTGACTATGTGTCAGCAACTTATTAATAACAGCCTTGGGTGAGCAAGGCACGTTTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS GCA 90 bp | GAAGATTCTGATTCCATAGTAGGTCTGAGGTGGAGCCTGAGGTTCTaGATTTCTGACACATCCTCACATGACAATGATGAAGCTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: EDSDSIVGLRWSLRF*ISDTSSHDNDEAAG Trigger: ACCAGCAGCTTCATCATTGTCATGTGAGGATGTGTCAGAAATGCAGAACCTCAGGCTCCACCTCAGACCTACTATGGAATCAGAATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CCA 90 bp | TCTGTCTGTCACCAGACCCAGTTGGAGGGAGTAGAAGACAAAATCTaGAGAAACAAAGCAGGTGGTGAGAATGCCTTTATCAAGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SVCHQTQLEGVEDKI*RNKAGGENAFIKQR Trigger: TCTCTGCTTGATAAAGGCATTCTCACCACCTGCTTTGTTTCTCCAGATTTTGTCTTCTACTCCCTCCAACTGGGTCTGGTGACAGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS CCA 90 bp | GGTTCTGCCAAAGACAGGGTGTCTGGGAATTCAGAGAACTCCATATaGAATTCAGAAGACTCAGTACAGGCAGGCTTCTGCGAAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: GSAKDRVSGNSENSI*NSEDSVQAGFCETK Trigger: TTTTGTTTCGCAGAAGCCTGCCTGTACTGAGTCTTCTGAATTCCATATGGAGTTCTCTGAATTCCCAGACACCCTGTCTTTGGCAGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CCA 90 bp | CTACTGTCAGTCTCAGCAGTTGGGTTCTGCCAAAGACAGGGTGTCTaGGAATTCAGAGAACTCCATATGGAATTCAGAAGACTCAGTACA | + |
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Preference number: 5 (lower is better) Translates to: LLSVSAVGFCQRQGV*EFRELHMEFRRLST Trigger: TGTACTGAGTCTTCTGAATTCCATATGGAGTTCTCTGAATTCCCAGACACCCTGTCTTTGGCAGAACCCAACTGCTGAGACTGACAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS TCA 90 bp | TCCTCACATGACAATGATGAAGCTGCTGGTCTGTGGACCTCACTGTaGACAGTATGGCTGTTATCTTCGAGTCAAAGTAGCTGCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: SSHDNDEAAGLWTSL*TVWLLSSSQSSCIL Trigger: TAAAATGCAGCTACTTTGACTCGAAGATAACAGCCATACTGTTCACAGTGAGGTCCACAGACCAGCAGCTTCATCATTGTCATGTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS GCA 90 bp | GAAACTGATAGGAGGGATGATGAAATAACTCTGCCAAACGTGCCTTaGTCACCCAAGGCTGTTATTAATAAGTTGCTGACACATAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: ETDRRDDEITLPNVP*SPKAVINKLLTHSH Trigger: GTGACTATGTGTCAGCAACTTATTAATAACAGCCTTGGGTGAGCAAGGCACGTTTGGCAGAGTTATTTCATCATCCCTCCTATCAGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS GCA 90 bp | TTAGGAGTTTTACAAATATTTCACTCTATGCAAGGTGGATTCACTTaGTGTAGTAACATTAGATTCCATACTTCCACTCCCCAGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LGVLQIFHSMQGGFT*CSNIRFHTSTPQVL Trigger: CAAGACCTGGGGAGTGGAAGTATGGAATCTAATGTTACTACAGCAAGTGAATCCACCTTGCATAGAGTGAAATATTTGTAAAACTCCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS TCA 90 bp | CCTGACTTCTACGTGGACATTCATTTAGATAGCCATGAATATACTTaGTTGCCATATACAAAACTCATGCTGAATTCTGCTCTCATGTTT | + |
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Preference number: 5 (lower is better) Translates to: PDFYVDIHLDSHEYT*LPYTKLMLNSALMF Trigger: AAACATGAGAGCAGAATTCAGCATGAGTTTTGTATATGGCAATCAAGTATATTCATGGCTATCTAAATGAATGTCCACGTAGAAGTCAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS CAA 90 bp | TGTGTGACCTGTGGCATGTGGCTGTGCATGAGGGACGGTGCCTTCTaGAGCACCGGCACATCTTCTCCCAGCATCATTGTCAGGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CVTCGMWLCMRDGAF*STGTSSPSIIVRQG Trigger: TCCCTGCCTGACAATGATGCTGGGAGAAGATGTGCCGGTGCTCAAGAAGGCACCGTCCCTCATGCACAGCCACATGCCACAGGTCACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS GCA 72 bp | TGTGACCTGTGGCATGTGGCTGTGCATGAGGGACGGTaGCTTCTTGAGCACCGGCACATCTTCTCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: CDLWHVAVHEGR*LLEHRHIFSQH Trigger: ATGCTGGGAGAAGATGTGCCGGTGCTCAAGAAGGCACCGTCCCTCATGCACAGCCACATGCCACAGGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS CCA 72 bp | GTCCCTGTCATACCTAGCTCGGAACTAGCACAGGCCTaGGCCTACAGGTCTGTCTGTCACCAGACCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: VPVIPSSELAQA*AYRSVCHQTQL Trigger: CAACTGGGTCTGGTGACAGACAGACCTGTAGGCCCAGGCCTGTGCTAGTTCCGAGCTAGGTATGACAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CCA 72 bp | CTGGACTCCTGCCAATGTTGTGTGACCTGTGGCATGTaGCTGTGCATGAGGGACGGTGCCTTCTTGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: LDSCQCCVTCGM*LCMRDGAFLST Trigger: GGTGCTCAAGAAGGCACCGTCCCTCATGCACAGCCACATGCCACAGGTCACACAACATTGGCAGGAGTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS TCA 72 bp | CCCAGTCCCCTGGGGATCTTAATAAGGCGAAGATTCTaGTTCCATAGTAGGTCTGAGGTGGAGCCTGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: PSPLGILIRRRF*FHSRSEVEPEV Trigger: AACCTCAGGCTCCACCTCAGACCTACTATGGAATCAGAATCTTCGCCTTATTAAGATCCCCAGGGGACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CCA 72 bp | CAATATGCTCAGGTGGCTACTGTCAGTCTCAGCAGTTaGGTTCTGCCAAAGACAGGGTGTCTGGGAATTCAG | + |
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Preference number: 6 (lower is better) Translates to: QYAQVATVSLSS*VLPKTGCLGIQ Trigger: CTGAATTCCCAGACACCCTGTCTTTGGCAGAACCCAACTGCTGAGACTGACAGTAGCCACCTGAGCATATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS GCA 72 bp | CTTCTCCCAGCATCATTGTCAGGCAGGGATCACTCTTaGTGTCCTGGAGATGAGGTGTACTTCTTGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLPASLSGRDHS*CPGDEVYFLTF Trigger: GAAAGTCAAGAAGTACACCTCATCTCCAGGACAGCAAGAGTGATCCCTGCCTGACAATGATGCTGGGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS CCA 72 bp | TTTGAGGGGCACAAAATGATGCCCACAAGCTGTCTATaGAGGAAGTCAAGTCTGGGTGGGAAGTACTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FEGHKMMPTSCL*RKSSLGGKYWH Trigger: ATGCCAGTACTTCCCACCCAGACTTGACTTCCTCCATAGACAGCTTGTGGGCATCATTTTGTGCCCCTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CAA 72 bp | ACAATATGCTCAGGTGGCTACTGTCAGTCTCAGCAGTaGGGTTCTGCCAAAGACAGGGTGTCTGGGAATTCA | + |
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Preference number: 6 (lower is better) Translates to: TICSGGYCQSQQ*GSAKDRVSGNS Trigger: TGAATTCCCAGACACCCTGTCTTTGGCAGAACCCAACTGCTGAGACTGACAGTAGCCACCTGAGCATATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS TCA 72 bp | ATTGTCAGGCAGGGATCACTCTTGCTGTCCTGGAGATaGGGTGTACTTCTTGACTTTCACATTGCTACCCCA | + |
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Preference number: 6 (lower is better) Translates to: IVRQGSLLLSWR*GVLLDFHIATP Trigger: TGGGGTAGCAATGTGAAAGTCAAGAAGTACACCTCATCTCCAGGACAGCAAGAGTGATCCCTGCCTGACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS GCA 72 bp | TTGATGAGAATTTCCAGGTGTAGGGTGGAGGGTTGGTaGTTACTTTCTCAGGTCACCCGTGTCTCTAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LMRISRCRVEGW*LLSQVTRVSKG Trigger: TCCTTTAGAGACACGGGTGACCTGAGAAAGTAAGCACCAACCCTCCACCCTACACCTGGAAATTCTCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CCA 72 bp | GTGTTGATGAGAATTTCCAGGTGTAGGGTGGAGGGTTaGTGCTTACTTTCTCAGGTCACCCGTGTCTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: VLMRISRCRVEG*CLLSQVTRVSK Trigger: TTTAGAGACACGGGTGACCTGAGAAAGTAAGCACCAACCCTCCACCCTACACCTGGAAATTCTCATCAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CAA 90 bp | CACTCTTGCTGTCCTGGAGATGAGGTGTACTTCTTGACTTTCACATaGCTACCCCATTGGCTCCTATGCTGCCAAGCTGCAAGAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: HSCCPGDEVYFLTFT*LPHWLLCCQAARNS Trigger: AGAATTTCTTGCAGCTTGGCAGCATAGGAGCCAATGGGGTAGCAATGTGAAAGTCAAGAAGTACACCTCATCTCCAGGACAGCAAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS CAA 90 bp | TTACAACATACAATATGCTCAGGTGGCTACTGTCAGTCTCAGCAGTaGGGTTCTGCCAAAGACAGGGTGTCTGGGAATTCAGAGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: LQHTICSGGYCQSQQ*GSAKDRVSGNSENS Trigger: GGAGTTCTCTGAATTCCCAGACACCCTGTCTTTGGCAGAACCCAACTGCTGAGACTGACAGTAGCCACCTGAGCATATTGTATGTTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS TCA 72 bp | GACAATGATGAAGCTGCTGGTCTGTGGACCTCACTGTaGACAGTATGGCTGTTATCTTCGAGTCAAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: DNDEAAGLWTSL*TVWLLSSSQSS Trigger: GCTACTTTGACTCGAAGATAACAGCCATACTGTTCACAGTGAGGTCCACAGACCAGCAGCTTCATCATTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS TCA 72 bp | ATCACTCTTGCTGTCCTGGAGATGAGGTGTACTTCTTaGCTTTCACATTGCTACCCCATTGGCTCCTATGCT | + |
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Preference number: 6 (lower is better) Translates to: ITLAVLEMRCTS*LSHCYPIGSYA Trigger: AGCATAGGAGCCAATGGGGTAGCAATGTGAAAGTCAAGAAGTACACCTCATCTCCAGGACAGCAAGAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS GCA 72 bp | TGTAGTCTGGAGTGCGATGGCATGATCTCAGCTCACTaGAACCTCTGCTTCTTAGATTCAAGCAATTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSLECDGMISAH*NLCFLDSSNSP Trigger: AGGAGAATTGCTTGAATCTAAGAAGCAGAGGTTGCAGTGAGCTGAGATCATGCCATCGCACTCCAGACTACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CCA 72 bp | AAAGACAGGGTGTCTGGGAATTCAGAGAACTCCATATaGAATTCAGAAGACTCAGTACAGGCAGGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KDRVSGNSENSI*NSEDSVQAGFC Trigger: GCAGAAGCCTGCCTGTACTGAGTCTTCTGAATTCCATATGGAGTTCTCTGAATTCCCAGACACCCTGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS GCA 72 bp | GATTCCATAGTAGGTCTGAGGTGGAGCCTGAGGTTCTaGATTTCTGACACATCCTCACATGACAATGATGAA | + |
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Preference number: 6 (lower is better) Translates to: DSIVGLRWSLRF*ISDTSSHDNDE Trigger: TTCATCATTGTCATGTGAGGATGTGTCAGAAATGCAGAACCTCAGGCTCCACCTCAGACCTACTATGGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS GCA 72 bp | ATGCGCTTGAGGTTGAATCACTTACAACATACAATATaGTCAGGTGGCTACTGTCAGTCTCAGCAGTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: MRLRLNHLQHTI*SGGYCQSQQLG Trigger: ACCCAACTGCTGAGACTGACAGTAGCCACCTGAGCATATTGTATGTTGTAAGTGATTCAACCTCAAGCGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS CCA 72 bp | GAATTAGTCCACTTTGCAGGTGATCATTCCATCCTTTaGCACCATCTCTGTTCCATACCTTTTCAACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ELVHFAGDHSIL*HHLCSIPFQPS Trigger: GGAGGGTTGAAAAGGTATGGAACAGAGATGGTGCCAAAGGATGGAATGATCACCTGCAAAGTGGACTAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS GCA 72 bp | AGGAGGGATGATGAAATAACTCTGCCAAACGTGCCTTaGTCACCCAAGGCTGTTATTAATAAGTTGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: RRDDEITLPNVP*SPKAVINKLLT Trigger: TGTCAGCAACTTATTAATAACAGCCTTGGGTGAGCAAGGCACGTTTGGCAGAGTTATTTCATCATCCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CAA 72 bp | TCTTTATTTTCTCGTCATTTCCCGTTGTTCTCAAACTaGCATGTGCATATGAATTGCCGAATTGCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SLFSRHFPLFSN*HVHMNCRIAWG Trigger: CCCCCAGGCAATTCGGCAATTCATATGCACATGCAAGTTTGAGAACAACGGGAAATGACGAGAAAATAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519550.1 ENST00000653366.1 |
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| CDS CAA 90 bp | GGCCTGTTTTGGAATATGTATTTGAAAGAGGTGGCAAAAGGAGAGTaGATATTGTTCAACCTCCTCCATTGCCTCAGAAAGTTTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLFWNMYLKEVAKGE*ILFNLLHCLRKFGF Trigger: GAACCCAAACTTTCTGAGGCAATGGAGGAGGTTGAACAATATCAACTCTCCTTTTGCCACCTCTTTCAAATACATATTCCAAAACAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS TCA 72 bp | GAGTACATATTGTATTTCAAAGACAGTGATAAGCTCTaGGAGCTCACTGGTAAACAAGGCATGATCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: EYILYFKDSDKL*ELTGKQGMILA Trigger: AGCAAGGATCATGCCTTGTTTACCAGTGAGCTCTCAGAGCTTATCACTGTCTTTGAAATACAATATGTACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS CCA 72 bp | TTTGATGGTTGTGATCAACACTTAGCTGGTTTTCAGTaGGACGTTCAGCTGTTATATCTTGTTCTTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: FDGCDQHLAGFQ*DVQLLYLVLCA Trigger: AGCACAAAGAACAAGATATAACAGCTGAACGTCCCACTGAAAACCAGCTAAGTGTTGATCACAACCATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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| CDS CCA 72 bp | TGGGGCTCAGAGAAATCTGAACCTGATATAGTGATTTaGGCAGCATGTAGTCAACAAATAGTCATTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: WGSEKSEPDIVI*AACSQQIVISH Trigger: ATGAGAAATGACTATTTGTTGACTACATGCTGCCCAAATCACTATATCAGGTTCAGATTTCTCTGAGCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS CAA 72 bp | TCATTTACTAGATGTCACGCAGTATTGGAAATGCCATaGAATGATGTGAATCGAGTTCCTGCCATCAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: SFTRCHAVLEMP*NDVNRVPAIKE Trigger: TTCCTTGATGGCAGGAACTCGATTCACATCATTCAATGGCATTTCCAATACTGCGTGACATCTAGTAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS CAA 72 bp | TGGAATATGTATTTGAAAGAGGTGGCAAAAGGAGAGTaGATATTGTTCAACCTCCTCCATTGCCTCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: WNMYLKEVAKGE*ILFNLLHCLRK Trigger: CTTTCTGAGGCAATGGAGGAGGTTGAACAATATCAACTCTCCTTTTGCCACCTCTTTCAAATACATATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657029.1 |
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| CDS TCA 72 bp | ATAACAAAGACATTGCCCCAAGTCCTGAAAGGAGAGTaGAGGTTTTCAAGTTCAGCAAGTATTGAAAGGATT | + |
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Preference number: 6 (lower is better) Translates to: ITKTLPQVLKGE*RFSSSASIERI Trigger: AATCCTTTCAATACTTGCTGAACTTGAAAACCTTCACTCTCCTTTCAGGACTTGGGGCAATGTCTTTGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS CAA 72 bp | AGTGAAGGTTTTCAAGTTCAGCAAGTATTGAAAGGATaGCAAAAGATTAGCCAGTTCTGGATGCAAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: SEGFQVQQVLKG*QKISQFWMQET Trigger: TGTCTCTTGCATCCAGAACTGGCTAATCTTTTGCAATCCTTTCAATACTTGCTGAACTTGAAAACCTTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS GCA 72 bp | AGCCATGATGGTATAAATAATGTGATGGATTCTGTATaGATGTATGTGGAATGTAAGAATGTAGTCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: SHDGINNVMDSV*MYVECKNVVTA Trigger: TGCAGTGACTACATTCTTACATTCCACATACATGCATACAGAATCCATCACATTATTTATACCATCATGGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS CAA 72 bp | AATAGTCATTTCTCATTTACTAGATGTCACGCAGTATaGGAAATGCCATTGAATGATGTGAATCGAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NSHFSFTRCHAV*EMPLNDVNRVP Trigger: AGGAACTCGATTCACATCATTCAATGGCATTTCCAATACTGCGTGACATCTAGTAAATGAGAAATGACTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519550.1 |
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| CDS TCA 72 bp | TACGTGGACATTCATTTAGATAGCCATGAATATACTTaGTTGCCATATACAAAACTCATGCTGAATTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: YVDIHLDSHEYT*LPYTKLMLNSA Trigger: AGCAGAATTCAGCATGAGTTTTGTATATGGCAATCAAGTATATTCATGGCTATCTAAATGAATGTCCACGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000519550.1 ENST00000653366.1 ENST00000657029.1 |
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