Pregenerated sensors for LINC01281 (Homo sapiens)
Ensembl gene IDs: ENSG00000235304Ensembl transcript IDs: ENST00000429281.1, ENST00000448597.1, ENST00000655040.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTGGCACAGCAATCCTCCCTATGGCTGCAGAGCATAGGACTGGCATaGAGCCACAGGGAGAGGAGTCCTTCCTGGAGGGCTTTAGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LAQQSSLWLQSIGLA*SHRERSPSWRALGN Trigger: ATTCCCTAAAGCCCTCCAGGAAGGACTCCTCTCCCTGTGGCTCCATGCCAGTCCTATGCTCTGCAGCCATAGGGAGGATTGCTGTGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS TCA 90 bp | GCCCCCACTAGACCTTCTGCCATGCTAGCAGCCAAGCCGTGTCTGTaGCCACTTCTCGCTGCCTTAAGGGAGACAGATTCTCAGACCTTT | + |
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Preference number: 5 (lower is better) Translates to: APTRPSAMLAAKPCL*PLLAALRETDSQTF Trigger: AAAGGTCTGAGAATCTGTCTCCCTTAAGGCAGCGAGAAGTGGTCACAGACACGGCTTGGCTGCTAGCATGGCAGAAGGTCTAGTGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 90 bp | TGGGGCTCAGGCCCATGGGAGGCCTCTCAGAGGCTGCATGGATCATaGACATGCCTTGGAGTGGAAGCTGGGACTTTTATCCAACAATTC | + |
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Preference number: 5 (lower is better) Translates to: WGSGPWEASQRLHGS*TCLGVEAGTFIQQF Trigger: GAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAGGCCTCCCATGGGCCTGAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 90 bp | TGTATGGAGTCCAAGGAGTCTTGGGGATGGCAGCCCCAAGGTTTGTaGGCATTGGCACAGCAATCCTCCCTATGGCTGCAGAGCATAGGA | + |
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Preference number: 5 (lower is better) Translates to: CMESKESWGWQPQGL*ALAQQSSLWLQSIG Trigger: TCCTATGCTCTGCAGCCATAGGGAGGATTGCTGTGCCAATGCTCACAAACCTTGGGGCTGCCATCCCCAAGACTCCTTGGACTCCATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS GCA 90 bp | TTCTGCCATGCTAGCAGCCAAGCCGTGTCTGTGACCACTTCTCGCTaGCTTAAGGGAGACAGATTCTCAGACCTTTGTGATAGCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FCHASSQAVSVTTSR*LKGDRFSDLCDSPS Trigger: AGAAGGGCTATCACAAAGGTCTGAGAATCTGTCTCCCTTAAGGCAGCGAGAAGTGGTCACAGACACGGCTTGGCTGCTAGCATGGCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 90 bp | CCCATGGGAGGCCTCTCAGAGGCTGCATGGATCATGAACATGCCTTaGAGTGGAAGCTGGGACTTTTATCCAACAATTCCCATCTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PMGGLSEAAWIMNMP*SGSWDFYPTIPISH Trigger: ATGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAGGCCTCCCATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 90 bp | ACAATCTGGCCCAGGAGGGAGTGGAGTGCCAATGTACTGATTAAGTaGTGCATGCTCACAGTCCCCATTGAGTATGCTACTTTCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: TIWPRREWSANVLIK*CMLTVPIEYATFRT Trigger: GGTCCTGAAAGTAGCATACTCAATGGGGACTGTGAGCATGCATCACTTAATCAGTACATTGGCACTCCACTCCCTCCTGGGCCAGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 90 bp | TGGAGTGGAAGCTGGGACTTTTATCCAACAATTCCCATCTCTCATTaGTGGAGGGTTCCTCCAGGGCCAAAGAACAAGCTCAGGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: WSGSWDFYPTIPISH*WRVPPGPKNKLRQK Trigger: TTTCTGCCTGAGCTTGTTCTTTGGCCCTGGAGGAACCCTCCACCAATGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 90 bp | ACATGGAGTTGTTGTGACTCACTCCTCCTAAGGTCAATCTTTGTATaGAGTCCAAGGAGTCTTGGGGATGGCAGCCCCAAGGTTTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: TWSCCDSLLLRSIFV*SPRSLGDGSPKVCE Trigger: CTCACAAACCTTGGGGCTGCCATCCCCAAGACTCCTTGGACTCCATACAAAGATTGACCTTAGGAGGAGTGAGTCACAACAACTCCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS CCA 90 bp | CTCTCAGAGGCTGCATGGATCATGAACATGCCTTGGAGTGGAAGCTaGGACTTTTATCCAACAATTCCCATCTCTCATTGGTGGAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: LSEAAWIMNMPWSGS*DFYPTIPISHWWRV Trigger: AACCCTCCACCAATGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 90 bp | GCTCTCAAAGTTGCCATCTTCCATACAAGGCTCTCAAAGTTGCTTTaGAGTTGTTCTCGGGTAGGCAACAGGGTCCACTGCATCCCATTT | + |
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Preference number: 5 (lower is better) Translates to: ALKVAIFHTRLSKLL*SCSRVGNRVHCIPF Trigger: AAATGGGATGCAGTGGACCCTGTTGCCTACCCGAGAACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACTTTGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS TCA 90 bp | ACCTACATACAATCTGGCCCAGGAGGGAGTGGAGTGCCAATGTACTaGTTAAGTGATGCATGCTCACAGTCCCCATTGAGTATGCTACTT | + |
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Preference number: 5 (lower is better) Translates to: TYIQSGPGGSGVPMY*LSDACSQSPLSMLL Trigger: AAGTAGCATACTCAATGGGGACTGTGAGCATGCATCACTTAATCAGTACATTGGCACTCCACTCCCTCCTGGGCCAGATTGTATGTAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS GCA 90 bp | TTCCATCTTGTGGCTTTGCCATCTTCAACACAAGGCTCTCAAAGTTaGCATCTTCCATACAAGGCTCTCAAAGTTGCTTTGAAGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: FHLVALPSSTQGSQS*HLPYKALKVALKLF Trigger: GAACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACTTTGAGAGCCTTGTGTTGAAGATGGCAAAGCCACAAGATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 90 bp | ATAATTCAACCTATAAAGCCTCCCAATACTCACATGGAGTTGTTGTaGCTCACTCCTCCTAAGGTCAATCTTTGTATGGAGTCCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: IIQPIKPPNTHMELL*LTPPKVNLCMESKE Trigger: CTCCTTGGACTCCATACAAAGATTGACCTTAGGAGGAGTGAGTCACAACAACTCCATGTGAGTATTGGGAGGCTTTATAGGTTGAATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS GCA 90 bp | CCAAAACTAACCACAAGAGAAGCTGAGAATTATGGTCTACCCGAGTaGCCAGAAAGAAGAGAAAATGGCTTCAGTGGTCAGATAACAATT | + |
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Preference number: 5 (lower is better) Translates to: PKLTTREAENYGLPE*PERRENGFSGQITI Trigger: AATTGTTATCTGACCACTGAAGCCATTTTCTCTTCTTTCTGGGCACTCGGGTAGACCATAATTCTCAGCTTCTCTTGTGGTTAGTTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS GCA 90 bp | ACAAGGCTCTCAAAGTTGCCATCTTCCATACAAGGCTCTCAAAGTTaGTTTGAAGTTGTTCTCTATTTGCAGCCAATTGGAGAGGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: TRLSKLPSSIQGSQS*FEVVLYLQPIGEGK Trigger: TTTTCCCTCTCCAATTGGCTGCAAATAGAGAACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACTTTGAGAGCCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS CCA 90 bp | AACACTATAAACTTCCAGGTCTTTGCTCTTATTTCTTCTCCTGACTaGAGCCTCTTTCAACTTCATCTAGCTGATCAATCATATGATAGC | + |
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Preference number: 5 (lower is better) Translates to: NTINFQVFALISSPD*SLFQLHLADQSYDS Trigger: GCTATCATATGATTGATCAGCTAGATGAAGTTGAAAGAGGCTCCAGTCAGGAGAAGAAATAAGAGCAAAGACCTGGAAGTTTATAGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS CCA 72 bp | GGGCTCAGGCCCATGGGAGGCCTCTCAGAGGCTGCATaGATCATGAACATGCCTTGGAGTGGAAGCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GLRPMGGLSEAA*IMNMPWSGSWD Trigger: GTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAGGCCTCCCATGGGCCTGAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS GCA 72 bp | ACTGGGGCTCAGGCCCATGGGAGGCCTCTCAGAGGCTaGATGGATCATGAACATGCCTTGGAGTGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TGAQAHGRPLRG*MDHEHALEWKL Trigger: CAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAGGCCTCCCATGGGCCTGAGCCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | CCAGTGGAGAGTGAGCAGATGTGTGTATTACCAGTGTaGGCAACTGGGGCTCAGGCCCATGGGAGGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PVESEQMCVLPV*ATGAQAHGRPL Trigger: GAGAGGCCTCCCATGGGCCTGAGCCCCAGTTGCCCACACTGGTAATACACACATCTGCTCACTCTCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | CCACAGGGATGTGGGAGGGGCGCCAACAGCTTCTGGTaGCCCCATATGTGGCACTTGAACCTCACAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: PQGCGRGANSFW*PHMWHLNLTTE Trigger: TTCTGTTGTGAGGTTCAAGTGCCACATATGGGGCCACCAGAAGCTGTTGGCGCCCCTCCCACATCCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 72 bp | TCCAAGGAGTCTTGGGGATGGCAGCCCCAAGGTTTGTaGGCATTGGCACAGCAATCCTCCCTATGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SKESWGWQPQGL*ALAQQSSLWLQ Trigger: CTGCAGCCATAGGGAGGATTGCTGTGCCAATGCTCACAAACCTTGGGGCTGCCATCCCCAAGACTCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS CAA 72 bp | GTGATAGCCCTTCTGGAGGTTCAGCCACTGGAGGTGTaGACCTACATACAATCTGGCCCAGGAGGGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VIALLEVQPLEV*TYIQSGPGGSG Trigger: TCCACTCCCTCCTGGGCCAGATTGTATGTAGGTCAACACCTCCAGTGGCTGAACCTCCAGAAGGGCTATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 90 bp | CAGACCTTTGTGATAGCCCTTCTGGAGGTTCAGCCACTGGAGGTGTaGACCTACATACAATCTGGCCCAGGAGGGAGTGGAGTGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: QTFVIALLEVQPLEV*TYIQSGPGGSGVPM Trigger: CATTGGCACTCCACTCCCTCCTGGGCCAGATTGTATGTAGGTCAACACCTCCAGTGGCTGAACCTCCAGAAGGGCTATCACAAAGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 72 bp | CACTCGGGTAGGCAACAGGGTCCACTGCATCCCATTTaGAACGTGGGGAAAACGAAGCTCAGAGAGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: HSGRQQGPLHPI*NVGKTKLREVV Trigger: CACAACCTCTCTGAGCTTCGTTTTCCCCACGTTTCAAATGGGATGCAGTGGACCCTGTTGCCTACCCGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429281.1 |
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| CDS TCA 72 bp | AGACCTTCTGCCATGCTAGCAGCCAAGCCGTGTCTGTaGCCACTTCTCGCTGCCTTAAGGGAGACAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: RPSAMLAAKPCL*PLLAALRETDS Trigger: AGAATCTGTCTCCCTTAAGGCAGCGAGAAGTGGTCACAGACACGGCTTGGCTGCTAGCATGGCAGAAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 72 bp | TTCTCGGGTAGGCAACAGGGTCCACTGCATCCCATTTaGAACGTGGGGAAAACGAAGCTCAGAGAGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: FSGRQQGPLHPI*NVGKTKLREVV Trigger: CACAACCTCTCTGAGCTTCGTTTTCCCCACGTTTCAAATGGGATGCAGTGGACCCTGTTGCCTACCCGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS GCA 72 bp | GCTAGCAGCCAAGCCGTGTCTGTGACCACTTCTCGCTaGCTTAAGGGAGACAGATTCTCAGACCTTTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: ASSQAVSVTTSR*LKGDRFSDLCD Trigger: ATCACAAAGGTCTGAGAATCTGTCTCCCTTAAGGCAGCGAGAAGTGGTCACAGACACGGCTTGGCTGCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | GGTTCAGCCACTGGAGGTGTTGACCTACATACAATCTaGCCCAGGAGGGAGTGGAGTGCCAATGTACTGATT | + |
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Preference number: 6 (lower is better) Translates to: GSATGGVDLHTI*PRREWSANVLI Trigger: AATCAGTACATTGGCACTCCACTCCCTCCTGGGCCAGATTGTATGTAGGTCAACACCTCCAGTGGCTGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 72 bp | GCTAGATCAGGTGGGAGTTCAGCAGACCAGGAGTCATaGCCAGGAAGCAAGTCAAGTCCAGGGAAGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ARSGGSSADQES*PGSKSSPGKSD Trigger: ATCTGACTTCCCTGGACTTGACTTGCTTCCTGGCAATGACTCCTGGTCTGCTGAACTCCCACCTGATCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS CAA 90 bp | GCCCATGGGAGGCCTCTCAGAGGCTGCATGGATCATGAACATGCCTaGGAGTGGAAGCTGGGACTTTTATCCAACAATTCCCATCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AHGRPLRGCMDHEHA*EWKLGLLSNNSHLS Trigger: TGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAGGCCTCCCATGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | GGCCTCTCAGAGGCTGCATGGATCATGAACATGCCTTaGAGTGGAAGCTGGGACTTTTATCCAACAATTCCC | + |
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Preference number: 6 (lower is better) Translates to: GLSEAAWIMNMP*SGSWDFYPTIP Trigger: GGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 90 bp | TTGGAGTGGAAGCTGGGACTTTTATCCAACAATTCCCATCTCTCATaGGTGGAGGGTTCCTCCAGGGCCAAAGAACAAGCTCAGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LEWKLGLLSNNSHLS*VEGSSRAKEQAQAE Trigger: TTCTGCCTGAGCTTGTTCTTTGGCCCTGGAGGAACCCTCCACCAATGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 72 bp | TGGGTGATCCTAGTTGGGCAGAACCCCTCCATACAATaGTCCAAGAACCCAAGCACTTTCCATCTTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: WVILVGQNPSIQ*SKNPSTFHLVA Trigger: AGCCACAAGATGGAAAGTGCTTGGGTTCTTGGATCATTGTATGGAGGGGTTCTGCCCAACTAGGATCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS TCA 72 bp | CCCAGGAGGGAGTGGAGTGCCAATGTACTGATTAAGTaGTGCATGCTCACAGTCCCCATTGAGTATGCTACT | + |
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Preference number: 6 (lower is better) Translates to: PRREWSANVLIK*CMLTVPIEYAT Trigger: AGTAGCATACTCAATGGGGACTGTGAGCATGCATCACTTAATCAGTACATTGGCACTCCACTCCCTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | TGGGACTTTTATCCAACAATTCCCATCTCTCATTGGTaGAGGGTTCCTCCAGGGCCAAAGAACAAGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: WDFYPTIPISHW*RVPPGPKNKLR Trigger: CCTGAGCTTGTTCTTTGGCCCTGGAGGAACCCTCCACCAATGAGAGATGGGAATTGTTGGATAAAAGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | AGCTGGGACTTTTATCCAACAATTCCCATCTCTCATTaGTGGAGGGTTCCTCCAGGGCCAAAGAACAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SWDFYPTIPISH*WRVPPGPKNKL Trigger: GAGCTTGTTCTTTGGCCCTGGAGGAACCCTCCACCAATGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 72 bp | AGGCCTCTCAGAGGCTGCATGGATCATGAACATGCCTaGGAGTGGAAGCTGGGACTTTTATCCAACAATTCC | + |
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Preference number: 6 (lower is better) Translates to: RPLRGCMDHEHA*EWKLGLLSNNS Trigger: GGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAGAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 90 bp | GGCTCTCAAAGTTGCCATCTTCCATACAAGGCTCTCAAAGTTGCTTaGAAGTTGTTCTCGGGTAGGCAACAGGGTCCACTGCATCCCATT | + |
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Preference number: 6 (lower is better) Translates to: GSQSCHLPYKALKVA*KLFSGRQQGPLHPI Trigger: AATGGGATGCAGTGGACCCTGTTGCCTACCCGAGAACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACTTTGAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS CCA 72 bp | CTCAGAGGCTGCATGGATCATGAACATGCCTTGGAGTaGAAGCTGGGACTTTTATCCAACAATTCCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: LRGCMDHEHALE*KLGLLSNNSHL Trigger: GAGATGGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGCCTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | ACTTTCAGGACCCAATTCTTTGATGACAATCCAGCCTaGGTGATCCTAGTTGGGCAGAACCCCTCCATACAA | + |
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Preference number: 6 (lower is better) Translates to: TFRTQFFDDNPA*VILVGQNPSIQ Trigger: TTGTATGGAGGGGTTCTGCCCAACTAGGATCACCCAGGCTGGATTGTCATCAAAGAATTGGGTCCTGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 72 bp | AAGCTGGGACTTTTATCCAACAATTCCCATCTCTCATaGGTGGAGGGTTCCTCCAGGGCCAAAGAACAAGCT | + |
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Preference number: 6 (lower is better) Translates to: KLGLLSNNSHLS*VEGSSRAKEQA Trigger: AGCTTGTTCTTTGGCCCTGGAGGAACCCTCCACCAATGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 72 bp | AGTTGCCATCTTCCATACAAGGCTCTCAAAGTTGCTTaGAAGTTGTTCTCGGGTAGGCAACAGGGTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: SCHLPYKALKVA*KLFSGRQQGPL Trigger: CAGTGGACCCTGTTGCCTACCCGAGAACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS GCA 72 bp | GATCCAAGAACCCAAGCACTTTCCATCTTGTGGCTTTaGCATCTTCAACACAAGGCTCTCAAAGTTGCCATC | + |
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Preference number: 6 (lower is better) Translates to: DPRTQALSILWL*HLQHKALKVAI Trigger: GATGGCAACTTTGAGAGCCTTGTGTTGAAGATGGCAAAGCCACAAGATGGAAAGTGCTTGGGTTCTTGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CCA 72 bp | GCTGCATGGATCATGAACATGCCTTGGAGTGGAAGCTaGGACTTTTATCCAACAATTCCCATCTCTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: AAWIMNMPWSGS*DFYPTIPISHW Trigger: CCAATGAGAGATGGGAATTGTTGGATAAAAGTCCCAGCTTCCACTCCAAGGCATGTTCATGATCCATGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429281.1 ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 72 bp | CAACAATCCAAGTCTGGAAGTATTGCACGTCACCACTaGCACCCATGTTCTTTCGGCCTGAACTCAGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: QQSKSGSIARHH*HPCSFGLNSVN Trigger: GTTAACTGAGTTCAGGCCGAAAGAACATGGGTGCAAGTGGTGACGTGCAATACTTCCAGACTTGGATTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS GCA 72 bp | GTGGCTTTGCCATCTTCAACACAAGGCTCTCAAAGTTaGCATCTTCCATACAAGGCTCTCAAAGTTGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VALPSSTQGSQS*HLPYKALKVAL Trigger: CAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACTTTGAGAGCCTTGTGTTGAAGATGGCAAAGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 90 bp | GAAAGGATTTGTTCCTGGTCTTCTCTCTTACCTTCTGGTAGTTCCTaGGCTTTTGGTCACATGATCCCAATCTTCACATGGTGTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ERICSWSSLLPSGSS*AFGHMIPIFTWCSP Trigger: AGGAGAACACCATGTGAAGATTGGGATCATGTGACCAAAAGCCAAGGAACTACCAGAAGGTAAGAGAGAAGACCAGGAACAAATCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS TCA 72 bp | CCTATAAAGCCTCCCAATACTCACATGGAGTTGTTGTaGCTCACTCCTCCTAAGGTCAATCTTTGTATGGAG | + |
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Preference number: 6 (lower is better) Translates to: PIKPPNTHMELL*LTPPKVNLCME Trigger: CTCCATACAAAGATTGACCTTAGGAGGAGTGAGTCACAACAACTCCATGTGAGTATTGGGAGGCTTTATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS CAA 72 bp | GTTGAAGAAGCCAGCACTGTAGCTTTATCTTACTCATaGGTGCCTATATACCCACCAACTTACCACCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VEEASTVALSYS*VPIYPPTYHPE Trigger: TTCTGGGTGGTAAGTTGGTGGGTATATAGGCACCAATGAGTAAGATAAAGCTACAGTGCTGGCTTCTTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS TCA 72 bp | TCTTACCTTCTGGTAGTTCCTTGGCTTTTGGTCACATaGTCCCAATCTTCACATGGTGTTCTCCTTGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SYLLVVPWLLVT*SQSSHGVLLVC Trigger: ACAAACAAGGAGAACACCATGTGAAGATTGGGATCATGTGACCAAAAGCCAAGGAACTACCAGAAGGTAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS CCA 72 bp | TCCTTGGCTTTTGGTCACATGATCCCAATCTTCACATaGTGTTCTCCTTGTTTGTGTCTTTCTGTGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SLAFGHMIPIFT*CSPCLCLSVSK Trigger: TTTGGACACAGAAAGACACAAACAAGGAGAACACCATGTGAAGATTGGGATCATGTGACCAAAAGCCAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448597.1 |
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| CDS CAA 72 bp | AGTTGCCATCTTCCATACAAGGCTCTCAAAGTTGCTTaGAAGTTGTTCTCTATTTGCAGCCAATTGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SCHLPYKALKVA*KLFSICSQLER Trigger: CCTCTCCAATTGGCTGCAAATAGAGAACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS CAA 90 bp | TTTCCATCTTGTGGCTTTGCCATCTTCAACACAAGGCTCTCAAAGTaGCCATCTTCCATACAAGGCTCTCAAAGTTGCTTTGAAGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FPSCGFAIFNTRLSK*PSSIQGSQSCFEVV Trigger: AACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACTTTGAGAGCCTTGTGTTGAAGATGGCAAAGCCACAAGATGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448597.1 ENST00000655040.1 |
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| CDS CAA 90 bp | GAGATCATGGTTGAAGAAGCCAGCACTGTAGCTTTATCTTACTCATaGGTGCCTATATACCCACCAACTTACCACCCAGAAATGCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: EIMVEEASTVALSYS*VPIYPPTYHPEMLN Trigger: ATTAAGCATTTCTGGGTGGTAAGTTGGTGGGTATATAGGCACCAATGAGTAAGATAAAGCTACAGTGCTGGCTTCTTCAACCATGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS CCA 72 bp | AACTTCCAGGTCTTTGCTCTTATTTCTTCTCCTGACTaGAGCCTCTTTCAACTTCATCTAGCTGATCAATCA | + |
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Preference number: 6 (lower is better) Translates to: NFQVFALISSPD*SLFQLHLADQS Trigger: TGATTGATCAGCTAGATGAAGTTGAAAGAGGCTCCAGTCAGGAGAAGAAATAAGAGCAAAGACCTGGAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS GCA 72 bp | TCAAAGTTGCCATCTTCCATACAAGGCTCTCAAAGTTaGTTTGAAGTTGTTCTCTATTTGCAGCCAATTGGA | + |
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Preference number: 6 (lower is better) Translates to: SKLPSSIQGSQS*FEVVLYLQPIG Trigger: TCCAATTGGCTGCAAATAGAGAACAACTTCAAAGCAACTTTGAGAGCCTTGTATGGAAGATGGCAACTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655040.1 |
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| CDS TCA 72 bp | AACTACAATAGTGACATGGTCTATTTATTAAGCACTTaGGTCATACCAATGTCTGGACTTGGATTTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: NYNSDMVYLLST*VIPMSGLGFPL Trigger: AAGGGGAAATCCAAGTCCAGACATTGGTATGACTCAAGTGCTTAATAAATAGACCATGTCACTATTGTAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429281.1 ENST00000448597.1 |
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