Pregenerated sensors for LINC01277 (Homo sapiens)
Ensembl gene IDs: ENSG00000229017Ensembl transcript IDs: ENST00000419957.6, ENST00000446115.2, ENST00000653679.1, ENST00000657496.1, ENST00000657620.1, ENST00000661404.1, ENST00000662381.1, ENST00000666199.1, ENST00000668463.1, ENST00000670340.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGGAGGCCTCAGAATCATGGCAGGAGGCGAAAGGCTCTTCTTTATaGAGTGATAAGAGTGATCCTGAAGCACAGCAGAGGGGCTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GEASESWQEAKGSSL*SDKSDPEAQQRGFL Trigger: CAGAAAGCCCCTCTGCTGTGCTTCAGGATCACTCTTATCACTGCATAAAGAAGAGCCTTTCGCCTCCTGCCATGATTCTGAGGCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666199.1 |
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| CDS GCA 90 bp | GTTCATGCTGTCAACGTGACTGTATGTAGCACACTGATCCATACATaGATAGGCATTGCTCCCACCTGCAGGCTGCTGCCTAGCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: VHAVNVTVCSTLIHT*IGIAPTCRLLPSLW Trigger: CCACAAGCTAGGCAGCAGCCTGCAGGTGGGAGCAATGCCTATGCATGTATGGATCAGTGTGCTACATACAGTCACGTTGACAGCATGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CCA 90 bp | ACATGCATAGGCATTGCTCCCACCTGCAGGCTGCTGCCTAGCTTGTaGCTAATACGGGGATATAGAGAAGCCAATTCATCTGGTTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: TCIGIAPTCRLLPSL*LIRGYREANSSGCS Trigger: GGAGCAACCAGATGAATTGGCTTCTCTATATCCCCGTATTAGCCACAAGCTAGGCAGCAGCCTGCAGGTGGGAGCAATGCCTATGCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CCA 90 bp | TGGCTCAGGGTACAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGCGAAAGGCTCTTCTTTATGCAGTGATAAGAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: WLRVQFHMAGEASES*QEAKGSSLCSDKSD Trigger: ATCACTCTTATCACTGCATAAAGAAGAGCCTTTCGCCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGTACCCTGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666199.1 |
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| CDS TCA 90 bp | AAGACCGTTGGCATTGGAGCTTCACCTCCCTGGTGCTTCTTCTGCTaGGCATACAACTGCCACCATATGTACCCCCTATACATGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: KTVGIGASPPWCFFC*AYNCHHMYPLYMLP Trigger: AGGAAGCATGTATAGGGGGTACATATGGTGGCAGTTGTATGCTCAGCAGAAGAAGCACCAGGGAGGTGAAGCTCCAATGCCAACGGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661404.1 |
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| CDS GCA 90 bp | GTATGTAGCACACTGATCCATACATGCATAGGCATTGCTCCCACCTaGAGGCTGCTGCCTAGCTTGTGGCTAATACGGGGATATAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: VCSTLIHTCIGIAPT*RLLPSLWLIRGYRE Trigger: TTCTCTATATCCCCGTATTAGCCACAAGCTAGGCAGCAGCCTGCAGGTGGGAGCAATGCCTATGCATGTATGGATCAGTGTGCTACATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS GCA 90 bp | CACAGAGGTAGAATGCCATTTTCCTCACATCACATCGAAGGTTCATaGTGTCAACGTGACCACATGATCTTGCAATTGTGTTCCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: HRGRMPFSSHHIEGS*CQRDHMILQLCSLV Trigger: CACCAGGGAACACAATTGCAAGATCATGTGGTCACGTTGACAGCATGAACCTTCGATGTGATGTGAGGAAAATGGCATTCTACCTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657496.1 |
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| CDS TCA 90 bp | AAGAACCACGTTCATTTTCATGCAGTCATTATAGGCATTGTCCAATaGTCAAGACCGTTGGCATTGGAGCTTCACCTCCCTGGTGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: KNHVHFHAVIIGIVQ*SRPLALELHLPGAS Trigger: AGAAGCACCAGGGAGGTGAAGCTCCAATGCCAACGGTCTTGATCATTGGACAATGCCTATAATGACTGCATGAAAATGAACGTGGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661404.1 |
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| CDS TCA 90 bp | AATGCCATTTTCCTCACATCACATCGAAGGTTCATGCTGTCAACGTaGCCACATGATCTTGCAATTGTGTTCCCTGGTGTTTATCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: NAIFLTSHRRFMLST*PHDLAIVFPGVYPN Trigger: ATTTGGATAAACACCAGGGAACACAATTGCAAGATCATGTGGTCACGTTGACAGCATGAACCTTCGATGTGATGTGAGGAAAATGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657496.1 |
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| CDS TCA 90 bp | GGTGACTCAAAGCAGAAGCCTTTATCCATAATGAGTAGAACTCAGTaGAGGCTGTATGAGAAGTTTGAATTTCCAACAGGAACTTCATGT | + |
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Preference number: 5 (lower is better) Translates to: GDSKQKPLSIMSRTQ*RLYEKFEFPTGTSC Trigger: ACATGAAGTTCCTGTTGGAAATTCAAACTTCTCATACAGCCTTCACTGAGTTCTACTCATTATGGATAAAGGCTTCTGCTTTGAGTCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000657620.1 ENST00000662381.1 ENST00000666199.1 ENST00000670340.1 |
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| CDS GCA 90 bp | TCCAAGCAATGTTTCTCTGTGTGGTTTCTAAACCTCCTGACTTTCTaGAAAAATGTAGCATACCCTTTATGCAGTGATAAGAGTGATCCT | + |
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Preference number: 5 (lower is better) Translates to: SKQCFSVWFLNLLTF*KNVAYPLCSDKSDP Trigger: AGGATCACTCTTATCACTGCATAAAGGGTATGCTACATTTTTGCAGAAAGTCAGGAGGTTTAGAAACCACACAGAGAAACATTGCTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653679.1 ENST00000657620.1 |
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| CDS GCA 90 bp | ACCATTATCCCTTTGAATATTGCTTCTGCTCTATTTCTTTCTCCTTaGCCTCTGAAACTTCAGTTTTACATGGTAGACCTTTCATACTTG | + |
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Preference number: 5 (lower is better) Translates to: TIIPLNIASALFLSP*PLKLQFYMVDLSYL Trigger: CAAGTATGAAAGGTCTACCATGTAAAACTGAAGTTTCAGAGGGCAAGGAGAAAGAAATAGAGCAGAAGCAATATTCAAAGGGATAATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419957.6 |
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| CDS GCA 72 bp | ACACTGATCCATACATGCATAGGCATTGCTCCCACCTaGAGGCTGCTGCCTAGCTTGTGGCTAATACGGGGA | + |
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Preference number: 6 (lower is better) Translates to: TLIHTCIGIAPT*RLLPSLWLIRG Trigger: TCCCCGTATTAGCCACAAGCTAGGCAGCAGCCTGCAGGTGGGAGCAATGCCTATGCATGTATGGATCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS GCA 72 bp | GAGCATACAACTGCCACCATATGTACCCCCTATACATaGTTCCTTGGACACCAGGCACTCTGCTGCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: EHTTATICTPYT*FLGHQALCCLH Trigger: GTGGAGGCAGCAGAGTGCCTGGTGTCCAAGGAAGCATGTATAGGGGGTACATATGGTGGCAGTTGTATGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446115.2 |
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| CDS CCA 72 bp | GTACAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGCGAAAGGCTCTTCTTACATGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: VQFHMAGEASES*QEAKGSSYMVT Trigger: TGTCACCATGTAAGAAGAGCCTTTCGCCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670340.1 |
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| CDS TCA 72 bp | GGCATTGGAGCTTCACCTCCCTGGTGCTTCTTCTGCTaGGCATACAACTGCCACCATATGTACCCCCTATAC | + |
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Preference number: 6 (lower is better) Translates to: GIGASPPWCFFC*AYNCHHMYPLY Trigger: GTATAGGGGGTACATATGGTGGCAGTTGTATGCTCAGCAGAAGAAGCACCAGGGAGGTGAAGCTCCAATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661404.1 |
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| CDS GCA 72 bp | GTCAACGTGACTGTATGTAGCACACTGATCCATACATaGATAGGCATTGCTCCCACCTGCAGGCTGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: VNVTVCSTLIHT*IGIAPTCRLLP Trigger: AGGCAGCAGCCTGCAGGTGGGAGCAATGCCTATGCATGTATGGATCAGTGTGCTACATACAGTCACGTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CCA 72 bp | GGCATTGCTCCCACCTGCAGGCTGCTGCCTAGCTTGTaGCTAATACGGGGATATAGAGAAGCCAATTCATCT | + |
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Preference number: 6 (lower is better) Translates to: GIAPTCRLLPSL*LIRGYREANSS Trigger: AGATGAATTGGCTTCTCTATATCCCCGTATTAGCCACAAGCTAGGCAGCAGCCTGCAGGTGGGAGCAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CCA 72 bp | GTACAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGCGAAAGGCTCTTCTTTATGCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: VQFHMAGEASES*QEAKGSSLCSD Trigger: ATCACTGCATAAAGAAGAGCCTTTCGCCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666199.1 |
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| CDS CAA 90 bp | CATACATGCATAGGCATTGCTCCCACCTGCAGGCTGCTGCCTAGCTaGTGGCTAATACGGGGATATAGAGAAGCCAATTCATCTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: HTCIGIAPTCRLLPS*WLIRGYREANSSGC Trigger: GCAACCAGATGAATTGGCTTCTCTATATCCCCGTATTAGCCACAAGCTAGGCAGCAGCCTGCAGGTGGGAGCAATGCCTATGCATGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CAA 72 bp | ATAGGCATTGCTCCCACCTGCAGGCTGCTGCCTAGCTaGTGGCTAATACGGGGATATAGAGAAGCCAATTCA | + |
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Preference number: 6 (lower is better) Translates to: IGIAPTCRLLPS*WLIRGYREANS Trigger: TGAATTGGCTTCTCTATATCCCCGTATTAGCCACAAGCTAGGCAGCAGCCTGCAGGTGGGAGCAATGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CAA 72 bp | AGTGATCCTGAAGCACAGCAGAGGGGCTTTCTGATGTaGCTGCCCAGATGTTTGGCCCAGATGTTAACACTG | + |
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Preference number: 6 (lower is better) Translates to: SDPEAQQRGFLM*LPRCLAQMLTL Trigger: CAGTGTTAACATCTGGGCCAAACATCTGGGCAGCAACATCAGAAAGCCCCTCTGCTGTGCTTCAGGATCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000446115.2 ENST00000653679.1 ENST00000657620.1 ENST00000666199.1 |
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| CDS GCA 72 bp | TCCCCATCTAGTTTCAGGCCTCTAGCTCTTCACCTGTaGTCACCACACGTTATACCTCCTTATGGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPSSFRPLALHL*SPHVIPPYGVF Trigger: GAAGACACCATAAGGAGGTATAACGTGTGGTGAGCACAGGTGAAGAGCTAGAGGCCTGAAACTAGATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000657620.1 ENST00000662381.1 ENST00000666199.1 ENST00000670340.1 |
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| CDS GCA 72 bp | AGAATGCCATTTTCCTCACATCACATCGAAGGTTCATaGTGTCAACGTGACCTTCACCTCCCTGGTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RMPFSSHHIEGS*CQRDLHLPGAS Trigger: AGAAGCACCAGGGAGGTGAAGGTCACGTTGACAGCATGAACCTTCGATGTGATGTGAGGAAAATGGCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000446115.2 ENST00000653679.1 ENST00000657620.1 ENST00000662381.1 ENST00000666199.1 |
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| CDS CAA 72 bp | ACCCCGAATACCACTGAGTCATCACGTTTCCCTGGATaGTCTTTAGGCTGTGGCAGTTTCTCAGACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TPNTTESSRFPG*SLGCGSFSDFP Trigger: AGGAAAGTCTGAGAAACTGCCACAGCCTAAAGACAATCCAGGGAAACGTGATGACTCAGTGGTATTCGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000653679.1 ENST00000657496.1 ENST00000657620.1 ENST00000661404.1 ENST00000662381.1 ENST00000666199.1 ENST00000668463.1 |
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| CDS CAA 72 bp | CAGATGTTTGGCCCAGATGTTAACACTGTTGTCCTTTaGCTGTTCCAGAAACCCACCCCGAATACCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: QMFGPDVNTVVL*LFQKPTPNTTE Trigger: CTCAGTGGTATTCGGGGTGGGTTTCTGGAACAGCAAAAGGACAACAGTGTTAACATCTGGGCCAAACATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000446115.2 ENST00000653679.1 ENST00000657620.1 ENST00000666199.1 |
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| CDS CAA 72 bp | TTGCTGCCCAGATGTTTGGCCCAGATGTTAACACTGTaGTCCTTTTGCTGTTCCAGAAACCCACCCCGAATA | + |
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Preference number: 6 (lower is better) Translates to: LLPRCLAQMLTL*SFCCSRNPPRI Trigger: TATTCGGGGTGGGTTTCTGGAACAGCAAAAGGACAACAGTGTTAACATCTGGGCCAAACATCTGGGCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000446115.2 ENST00000653679.1 ENST00000657620.1 ENST00000666199.1 |
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| CDS CAA 90 bp | AGTGATAAGAGTGATCCTGAAGCACAGCAGAGGGGCTTTCTGATGTaGCTGCCCAGATGTTTGGCCCAGATGTTAACACTGTTGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SDKSDPEAQQRGFLM*LPRCLAQMLTLLSF Trigger: AAAGGACAACAGTGTTAACATCTGGGCCAAACATCTGGGCAGCAACATCAGAAAGCCCCTCTGCTGTGCTTCAGGATCACTCTTATCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000446115.2 ENST00000653679.1 ENST00000657620.1 ENST00000666199.1 |
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| CDS CAA 90 bp | GTTTTAAAAGCAATTGTTTACGCACCAAGGTCTGCCGCTTCATTCTaGAAGTCACTGAGACCACTAATCTACCGGCAGGAACCAATTCCA | + |
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Preference number: 6 (lower is better) Translates to: VLKAIVYAPRSAASF*KSLRPLIYRQEPIP Trigger: TGGAATTGGTTCCTGCCGGTAGATTAGTGGTCTCAGTGACTTCAAGAATGAAGCGGCAGACCTTGGTGCGTAAACAATTGCTTTTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657496.1 |
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| CDS TCA 72 bp | GTTCATTTTCATGCAGTCATTATAGGCATTGTCCAATaGTCAAGACCGTTGGCATTGGAGCTTCACCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VHFHAVIIGIVQ*SRPLALELHLP Trigger: AGGGAGGTGAAGCTCCAATGCCAACGGTCTTGATCATTGGACAATGCCTATAATGACTGCATGAAAATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661404.1 |
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| CDS CAA 72 bp | GTTGCTCCTGCTGAAGTACACCAACTAATCACCTTCTaGATTACTTCTGATGCACTCCTGCTCATTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: VAPAEVHQLITF*ITSDALLLIVS Trigger: AGATACAATGAGCAGGAGTGCATCAGAAGTAATCAAGAAGGTGATTAGTTGGTGTACTTCAGCAGGAGCAAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CAA 72 bp | GGTTCATGCTGTCAACGTGACCACATGATCTTGCAATaGTGTTCCCTGGTGTTTATCCAAATGAATCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: GSCCQRDHMILQ*CSLVFIQMNRK Trigger: CTTTCGATTCATTTGGATAAACACCAGGGAACACAATTGCAAGATCATGTGGTCACGTTGACAGCATGAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657496.1 |
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| CDS TCA 72 bp | GGATATAGAGAAGCCAATTCATCTGGTTGCTCCTGCTaGAGTACACCAACTAATCACCTTCTTGATTACTTC | + |
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Preference number: 6 (lower is better) Translates to: GYREANSSGCSC*STPTNHLLDYF Trigger: GAAGTAATCAAGAAGGTGATTAGTTGGTGTACTTCAGCAGGAGCAACCAGATGAATTGGCTTCTCTATATCC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419957.6 ENST00000668463.1 |
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| CDS CAA 72 bp | ATCGAAGGTTCATGCTGTCAACGTGACCACATGATCTaGCAATTGTGTTCCCTGGTGTTTATCCAAATGAAT | + |
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Preference number: 6 (lower is better) Translates to: IEGSCCQRDHMI*QLCSLVFIQMN Trigger: ATTCATTTGGATAAACACCAGGGAACACAATTGCAAGATCATGTGGTCACGTTGACAGCATGAACCTTCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657496.1 |
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| CDS CAA 90 bp | TGGATTGTCTTTAGGCTGTGGCAGTTTCTCAGACTTTCCTTGCTTTaGATGACCTTGACAGTTTCGATGAATATTAATCAGGCATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: WIVFRLWQFLRLSLL*MTLTVSMNINQAFC Trigger: ACAAAATGCCTGATTAATATTCATCGAAACTGTCAAGGTCATCAAAAGCAAGGAAAGTCTGAGAAACTGCCACAGCCTAAAGACAATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000653679.1 ENST00000657496.1 ENST00000657620.1 ENST00000661404.1 ENST00000662381.1 ENST00000666199.1 ENST00000668463.1 |
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| CDS TCA 72 bp | AAGCAGAAGCCTTTATCCATAATGAGTAGAACTCAGTaGAGGCTGTATGAGAAGTTTGAATTTCCAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: KQKPLSIMSRTQ*RLYEKFEFPTG Trigger: TCCTGTTGGAAATTCAAACTTCTCATACAGCCTTCACTGAGTTCTACTCATTATGGATAAAGGCTTCTGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000657620.1 ENST00000662381.1 ENST00000666199.1 ENST00000670340.1 |
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| CDS GCA 72 bp | TATCTTCTGGCTTCTATTGTTGCTATTAGAGACAGCTaGCAGTCTCATTGTTGCTCTTTTGTAGATAATGTG | + |
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Preference number: 6 (lower is better) Translates to: YLLASIVAIRDS*QSHCCSFVDNV Trigger: CACATTATCTACAAAAGAGCAACAATGAGACTGGCAGCTGTCTCTAATAGCAACAATAGAAGCCAGAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419957.6 |
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| CDS CAA 72 bp | GATGTTTTCCTCATGATTAGATGGTGGTTACAAATTTaGGGGAGGAAGAACACAGAGGTAGAATGCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: DVFLMIRWWLQI*GRKNTEVECHF Trigger: AAAATGGCATTCTACCTCTGTGTTCTTCCTCCCCAAAATTTGTAACCACCATCTAATCATGAGGAAAACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000653679.1 ENST00000657496.1 ENST00000657620.1 ENST00000661404.1 ENST00000662381.1 ENST00000666199.1 ENST00000668463.1 |
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| CDS CAA 90 bp | TTTAGGCTGTGGCAGTTTCTCAGACTTTCCTTGCTTTTGATGACCTaGACAGTTTCGATGAATATTAATCAGGCATTTTGTAGAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRLWQFLRLSLLLMT*TVSMNINQAFCRIF Trigger: GAAGATTCTACAAAATGCCTGATTAATATTCATCGAAACTGTCAAGGTCATCAAAAGCAAGGAAAGTCTGAGAAACTGCCACAGCCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000653679.1 ENST00000657496.1 ENST00000657620.1 ENST00000661404.1 ENST00000662381.1 ENST00000666199.1 ENST00000668463.1 |
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| CDS GCA 72 bp | AAAATTCCCAACCATTATCCCTTTGAATATTGCTTCTaGTCTATTTCTTTCTCCTTGCCCTCTGAAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: KIPNHYPFEYCF*SISFSLPSETS Trigger: TGAAGTTTCAGAGGGCAAGGAGAAAGAAATAGAGCAGAAGCAATATTCAAAGGGATAATGGTTGGGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419957.6 |
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| CDS CAA 72 bp | ATTGTGGTTTTCTCTATACTTATCCTGCTTGAGGGTTaGCTGAGCTTCTTAACCAGTGGGTTAAATGTATTT | + |
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Preference number: 6 (lower is better) Translates to: IVVFSILILLEG*LSFLTSGLNVF Trigger: AAATACATTTAACCCACTGGTTAAGAAGCTCAGCAAACCCTCAAGCAGGATAAGTATAGAGAAAACCACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419957.6 |
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| CDS CAA 72 bp | TGGCAGTTTCTCAGACTTTCCTTGCTTTTGATGACCTaGACAGTTTCGATGAATATTAATCAGGCATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: WQFLRLSLLLMT*TVSMNINQAFC Trigger: ACAAAATGCCTGATTAATATTCATCGAAACTGTCAAGGTCATCAAAAGCAAGGAAAGTCTGAGAAACTGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000653679.1 ENST00000657496.1 ENST00000657620.1 ENST00000661404.1 ENST00000662381.1 ENST00000666199.1 ENST00000668463.1 |
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| CDS CAA 90 bp | AGTTGCATAATTGTGGTTTTCTCTATACTTATCCTGCTTGAGGGTTaGCTGAGCTTCTTAACCAGTGGGTTAAATGTATTTTATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SCIIVVFSILILLEG*LSFLTSGLNVFYLL Trigger: AAGCAGATAAAATACATTTAACCCACTGGTTAAGAAGCTCAGCAAACCCTCAAGCAGGATAAGTATAGAGAAAACCACAATTATGCAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419957.6 |
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| CDS CAA 72 bp | AATCAGGCATTTTGTAGAATCTTCCTCAATTTGGACTaGTATGATGTTTTCCTCATGATTAGATGGTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: NQAFCRIFLNLD*YDVFLMIRWWL Trigger: TAACCACCATCTAATCATGAGGAAAACATCATACAAGTCCAAATTGAGGAAGATTCTACAAAATGCCTGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419957.6 ENST00000446115.2 ENST00000653679.1 ENST00000657496.1 ENST00000657620.1 ENST00000661404.1 ENST00000662381.1 ENST00000666199.1 ENST00000668463.1 |
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