Pregenerated sensors for LINC01276 (Homo sapiens)
Ensembl gene IDs: ENSG00000226917Ensembl transcript IDs: ENST00000416951.5, ENST00000448211.1, ENST00000652969.1, ENST00000660223.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCAGCTTGACCCTTAGGCCTGGAGAAGGCAGGGGAGGGTCGTGGTaGTTGGCGGTAGGGAGCTTCCATTACCCTCGCCCCGGAAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: GSLTLRPGEGRGGSW*LAVGSFHYPRPGSG Trigger: TCCACTTCCGGGGCGAGGGTAATGGAAGCTCCCTACCGCCAAGCACCACGACCCTCCCCTGCCTTCTCCAGGCCTAAGGGTCAAGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416951.5 ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 90 bp | CCTGGCAGCTTGACCCTTAGGCCTGGAGAAGGCAGGGGAGGGTCGTaGTGCTTGGCGGTAGGGAGCTTCCATTACCCTCGCCCCGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: PGSLTLRPGEGRGGS*CLAVGSFHYPRPGS Trigger: ACTTCCGGGGCGAGGGTAATGGAAGCTCCCTACCGCCAAGCACCACGACCCTCCCCTGCCTTCTCCAGGCCTAAGGGTCAAGCTGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416951.5 ENST00000652969.1 ENST00000660223.1 |
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| CDS TCA 90 bp | TGCTTGGCGGTAGGGAGCTTCCATTACCCTCGCCCCGGAAGTGGATaGGAGGCAGCAGCTCCTGAGGTGGAGGCCCTTGGCCAGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: CLAVGSFHYPRPGSG*EAAAPEVEALGQQC Trigger: ACACTGCTGGCCAAGGGCCTCCACCTCAGGAGCTGCTGCCTCTCATCCACTTCCGGGGCGAGGGTAATGGAAGCTCCCTACCGCCAAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416951.5 ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 90 bp | TTGGTTCTTGTCACTGACTCCAAGAGGTTGTGGCAGGTCCGGGTGTaGCAGTGCCCACCACACTGTAGCCCTGCCTGTTGGGGGTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LVLVTDSKRLWQVRV*QCPPHCSPACWGWG Trigger: ACCCCACCCCCAACAGGCAGGGCTACAGTGTGGTGGGCACTGCCACACCCGGACCTGCCACAACCTCTTGGAGTCAGTGACAAGAACCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000416951.5 ENST00000448211.1 |
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| CDS CCA 90 bp | CATCCTGGGGTCTTGGGTGCTGAAGGTTGGAGCCAAGGCCTGTCGTaGGACCTCCCAAGGGCAGAGGACTTGAGCAGGGGCAGATGTCAT | + |
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Preference number: 5 (lower is better) Translates to: HPGVLGAEGWSQGLS*DLPRAEDLSRGRCH Trigger: ATGACATCTGCCCCTGCTCAAGTCCTCTGCCCTTGGGAGGTCCCACGACAGGCCTTGGCTCCAACCTTCAGCACCCAAGACCCCAGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448211.1 |
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| CDS CCA 90 bp | TCTTCTCCGGCTTCCAGAGGCCAGAGTGGGCCTCTCCCTGCTGGATaGGGGTTGGAGGGAGGGCAGCAGTCACATGATCATGTCTATTCC | + |
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Preference number: 5 (lower is better) Translates to: SSPASRGQSGPLPAG*GLEGGQQSHDHVYS Trigger: GGAATAGACATGATCATGTGACTGCTGCCCTCCCTCCAACCCCCATCCAGCAGGGAGAGGCCCACTCTGGCCTCTGGAAGCCGGAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416951.5 ENST00000448211.1 |
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| CDS CCA 90 bp | CATGTAACTCTCTCAGCCTCGAATTGTCCATCTGGCACTGCCTGGTaGCCTGGCAGCTTGACCCTTAGGCCTGGAGAAGGCAGGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: HVTLSASNCPSGTAW*PGSLTLRPGEGRGG Trigger: CCCTCCCCTGCCTTCTCCAGGCCTAAGGGTCAAGCTGCCAGGCCACCAGGCAGTGCCAGATGGACAATTCGAGGCTGAGAGAGTTACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS TCA 90 bp | GGACAATTCCTGGGCTTGCTGACACCTTCCCATCACGGTGGCAGATaGGTGGAGAAGTGGGCTAGAGGACACGGGGTGAGGCACAAACAG | + |
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Preference number: 5 (lower is better) Translates to: GQFLGLLTPSHHGGR*VEKWARGHGVRHKQ Trigger: CTGTTTGTGCCTCACCCCGTGTCCTCTAGCCCACTTCTCCACTCATCTGCCACCGTGATGGGAAGGTGTCAGCAAGCCCAGGAATTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 90 bp | AATCATGTAACTCTCTCAGCCTCGAATTGTCCATCTGGCACTGCCTaGTGGCCTGGCAGCTTGACCCTTAGGCCTGGAGAAGGCAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: NHVTLSASNCPSGTA*WPGSLTLRPGEGRG Trigger: TCCCCTGCCTTCTCCAGGCCTAAGGGTCAAGCTGCCAGGCCACCAGGCAGTGCCAGATGGACAATTCGAGGCTGAGAGAGTTACATGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS TCA 90 bp | TTGAGGGTTGCCCCTGCAGTGCTAAATCCCAGCTGTCCTGTGGGCTaGGTAAAGCTCTCTTGGTCCCTGCACTGGAGAAACTCTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LRVAPAVLNPSCPVG*VKLSWSLHWRNSAG Trigger: ACCTGCAGAGTTTCTCCAGTGCAGGGACCAAGAGAGCTTTACTCAGCCCACAGGACAGCTGGGATTTAGCACTGCAGGGGCAACCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS TCA 90 bp | GCTTCTGTCCCTGAAGACCTTGGTGGTGCCCTGACCCTTGACTTCTaGCTTCTGAGAGAATGGGAGAATGGCATCCCAGCTGGACCAAGA | + |
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Preference number: 5 (lower is better) Translates to: ASVPEDLGGALTLDF*LLREWENGIPAGPR Trigger: TCTTGGTCCAGCTGGGATGCCATTCTCCCATTCTCTCAGAAGTCAGAAGTCAAGGGTCAGGGCACCACCAAGGTCTTCAGGGACAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS GCA 90 bp | TGGTCCCTGCACTGGAGAAACTCTGCAGGTGAGAAGCAGAAAGGCTaGTTAGGGTGGACAATTCCTGGGCTTGCTGACACCTTCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: WSLHWRNSAGEKQKG*LGWTIPGLADTFPS Trigger: TGATGGGAAGGTGTCAGCAAGCCCAGGAATTGTCCACCCTAAGCAGCCTTTCTGCTTCTCACCTGCAGAGTTTCTCCAGTGCAGGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 90 bp | ATGGGATCTCTCTCTGTCCATCTCCATGGCTCCTCTCCTAAACTTTaGAGCCCAAGGCATAGCCTTTTGTCCTTCCTCTCCCCCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: MGSLSVHLHGSSPKL*SPRHSLLSFLSPLL Trigger: CAGCAAGGGGGAGAGGAAGGACAAAAGGCTATGCCTTGGGCTCCAAAGTTTAGGAGAGGAGCCATGGAGATGGACAGAGAGAGATCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000416951.5 ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 90 bp | CATGCTGTAAGTATCATTGTCCTTCAAGCCGTTGCAGCCTACTGTTaGAGCGAGAGCCCTGGTTTTGAAGTCAAGCCTGAATCTGCACCT | + |
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Preference number: 5 (lower is better) Translates to: HAVSIIVLQAVAAYC*SESPGFEVKPESAP Trigger: AGGTGCAGATTCAGGCTTGACTTCAAAACCAGGGCTCTCGCTCCAACAGTAGGCTGCAACGGCTTGAAGGACAATGATACTTACAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS TCA 90 bp | TCAAGCCTGAATCTGCACCTCAGCTCCACCACCTGTGCACGTGTGTaGCTTTGGATAAATCATGTAACTCTCTCAGCCTCGAATTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SSLNLHLSSTTCARV*LWINHVTLSASNCP Trigger: TGGACAATTCGAGGCTGAGAGAGTTACATGATTTATCCAAAGTCACACACGTGCACAGGTGGTGGAGCTGAGGTGCAGATTCAGGCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS GCA 90 bp | GGTTTTGAAGTCAAGCCTGAATCTGCACCTCAGCTCCACCACCTGTaGACGTGTGTGACTTTGGATAAATCATGTAACTCTCTCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GFEVKPESAPQLHHL*TCVTLDKSCNSLSL Trigger: GAGGCTGAGAGAGTTACATGATTTATCCAAAGTCACACACGTGCACAGGTGGTGGAGCTGAGGTGCAGATTCAGGCTTGACTTCAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CCA 90 bp | GGTCTTCTGTCCCAAGACAAATGGAAGATGATAGTCATCTGCTTTTaGACTCTTCTGCTCTTGCCTAGACCACAGTGGACCAAGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: GLLSQDKWKMIVICF*TLLLLPRPQWTKGL Trigger: CAACCCCTTGGTCCACTGTGGTCTAGGCAAGAGCAGAAGAGTCCAAAAGCAGATGACTATCATCTTCCATTTGTCTTGGGACAGAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS GCA 90 bp | CCCTTGCTGGAAAAAGTTCAAGACAAATGGAAGATGATAGTCATCTaGTTTTGGACTCTTCTGCTCTTGCCTAGACCACAGTGGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: PLLEKVQDKWKMIVI*FWTLLLLPRPQWTK Trigger: CTTGGTCCACTGTGGTCTAGGCAAGAGCAGAAGAGTCCAAAAGCAGATGACTATCATCTTCCATTTGTCTTGAACTTTTTCCAGCAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652969.1 |
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| CDS GCA 90 bp | AATATGGGTCTTCTGTCCCAAGACAAATGGAAGATGATAGTCATCTaGTTTTGGACTCTTCTGCTCTTGCCTAGACCACAGTGGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: NMGLLSQDKWKMIVI*FWTLLLLPRPQWTK Trigger: CTTGGTCCACTGTGGTCTAGGCAAGAGCAGAAGAGTCCAAAAGCAGATGACTATCATCTTCCATTTGTCTTGGGACAGAAGACCCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS TCA 72 bp | GTAGGGAGCTTCCATTACCCTCGCCCCGGAAGTGGATaGGAGGCAGCAGCTCCTGAGGTGGAGGCCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VGSFHYPRPGSG*EAAAPEVEALG Trigger: GCCAAGGGCCTCCACCTCAGGAGCTGCTGCCTCTCATCCACTTCCGGGGCGAGGGTAATGGAAGCTCCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416951.5 ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 72 bp | GTCTTGGGTGCTGAAGGTTGGAGCCAAGGCCTGTCGTaGGACCTCCCAAGGGCAGAGGACTTGAGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VLGAEGWSQGLS*DLPRAEDLSRG Trigger: GCCCCTGCTCAAGTCCTCTGCCCTTGGGAGGTCCCACGACAGGCCTTGGCTCCAACCTTCAGCACCCAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448211.1 |
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| CDS CCA 72 bp | TTGACCCTTAGGCCTGGAGAAGGCAGGGGAGGGTCGTaGTGCTTGGCGGTAGGGAGCTTCCATTACCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LTLRPGEGRGGS*CLAVGSFHYPR Trigger: GCGAGGGTAATGGAAGCTCCCTACCGCCAAGCACCACGACCCTCCCCTGCCTTCTCCAGGCCTAAGGGTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000416951.5 ENST00000652969.1 ENST00000660223.1 |
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| CDS TCA 72 bp | TGTAAGTATCTGGCACTGCCTGGTGGCCTGGCAGCTTaGCCCTTAGGCCTGGAGAAGGCAGGGGAGGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: CKYLALPGGLAA*PLGLEKAGEGR Trigger: ACGACCCTCCCCTGCCTTCTCCAGGCCTAAGGGTCAAGCTGCCAGGCCACCAGGCAGTGCCAGATACTTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652969.1 |
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| CDS TCA 72 bp | CTGGGCTTGCTGACACCTTCCCATCACGGTGGCAGATaGGTGGAGAAGTGGGCTAGAGGACACGGGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LGLLTPSHHGGR*VEKWARGHGVR Trigger: CCTCACCCCGTGTCCTCTAGCCCACTTCTCCACTCATCTGCCACCGTGATGGGAAGGTGTCAGCAAGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 72 bp | GGTGTCCTCAGGCACCTCTCCATCTGTCCTCTTGCCTaGGCTTCTGTCCCTGAAGACCTTGGTGGTGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GVLRHLSICPLA*ASVPEDLGGAL Trigger: CAGGGCACCACCAAGGTCTTCAGGGACAGAAGCCCAGGCAAGAGGACAGATGGAGAGGTGCCTGAGGACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CCA 72 bp | CTCTCAGCCTCGAATTGTCCATCTGGCACTGCCTGGTaGCCTGGCAGCTTGACCCTTAGGCCTGGAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LSASNCPSGTAW*PGSLTLRPGEG Trigger: GCCTTCTCCAGGCCTAAGGGTCAAGCTGCCAGGCCACCAGGCAGTGCCAGATGGACAATTCGAGGCTGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CCA 72 bp | TGCTTTTGGACTCTTCTGCTCTTGCCTAGACCACAGTaGACCAAGGGGTTGTGGTGTGTGCTGCGTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CFWTLLLLPRPQ*TKGLWCVLRGP Trigger: GGGGCCACGCAGCACACACCACAACCCCTTGGTCCACTGTGGTCTAGGCAAGAGCAGAAGAGTCCAAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 72 bp | ACTCTCTCAGCCTCGAATTGTCCATCTGGCACTGCCTaGTGGCCTGGCAGCTTGACCCTTAGGCCTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TLSASNCPSGTA*WPGSLTLRPGE Trigger: TTCTCCAGGCCTAAGGGTCAAGCTGCCAGGCCACCAGGCAGTGCCAGATGGACAATTCGAGGCTGAGAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS TCA 72 bp | GCCCCTGCAGTGCTAAATCCCAGCTGTCCTGTGGGCTaGGTAAAGCTCTCTTGGTCCCTGCACTGGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: APAVLNPSCPVG*VKLSWSLHWRN Trigger: GTTTCTCCAGTGCAGGGACCAAGAGAGCTTTACTCAGCCCACAGGACAGCTGGGATTTAGCACTGCAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS CAA 72 bp | TTGAAGGTGTCCTCAGGCACCTCTCCATCTGTCCTCTaGCCTGGGCTTCTGTCCCTGAAGACCTTGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LKVSSGTSPSVL*PGLLSLKTLVV Trigger: CACCACCAAGGTCTTCAGGGACAGAAGCCCAGGCAAGAGGACAGATGGAGAGGTGCCTGAGGACACCTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CAA 72 bp | CCGTTGCAGCCTACTGTTGGAGCGAGAGCCCTGGTTTaGAAGTCAAGCCTGAATCTGCACCTCAGCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PLQPTVGARALV*KSSLNLHLSST Trigger: GGTGGAGCTGAGGTGCAGATTCAGGCTTGACTTCAAAACCAGGGCTCTCGCTCCAACAGTAGGCTGCAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CAA 90 bp | TCCTTCAAGCCGTTGCAGCCTACTGTTGGAGCGAGAGCCCTGGTTTaGAAGTCAAGCCTGAATCTGCACCTCAGCTCCACCACCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SFKPLQPTVGARALV*KSSLNLHLSSTTCA Trigger: TGCACAGGTGGTGGAGCTGAGGTGCAGATTCAGGCTTGACTTCAAAACCAGGGCTCTCGCTCCAACAGTAGGCTGCAACGGCTTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS TCA 72 bp | GAAAGGCTGCTTAGGGTGGACAATTCCTGGGCTTGCTaGCACCTTCCCATCACGGTGGCAGATGAGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: ERLLRVDNSWAC*HLPITVADEWR Trigger: TCTCCACTCATCTGCCACCGTGATGGGAAGGTGTCAGCAAGCCCAGGAATTGTCCACCCTAAGCAGCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS CCA 72 bp | CTGACTTCTGAGAGAATGGGAGAATGGCATCCCAGCTaGACCAAGACAGTGCCTAATATGGGTCTTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LTSERMGEWHPS*TKTVPNMGLLS Trigger: GGACAGAAGACCCATATTAGGCACTGTCTTGGTCCAGCTGGGATGCCATTCTCCCATTCTCTCAGAAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CAA 90 bp | GCAGCCAGGTTGCTTATCCACCCATTCTTATCTCTTATTAATAACTaGAGGGTTGCCCCTGCAGTGCTAAATCCCAGCTGTCCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: AARLLIHPFLSLINN*RVAPAVLNPSCPVG Trigger: GCCCACAGGACAGCTGGGATTTAGCACTGCAGGGGCAACCCTCAAGTTATTAATAAGAGATAAGAATGGGTGGATAAGCAACCTGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS TCA 72 bp | ACAGCATCCTCTGCTGAATCATCACCTTTCAAGCCCTaGCAGCCTTCAGCATGGCATTTTGCACACAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: TASSAESSPFKP*QPSAWHFAHSR Trigger: CCTACTGTGTGCAAAATGCCATGCTGAAGGCTGTCAGGGCTTGAAAGGTGATGATTCAGCAGAGGATGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS TCA 72 bp | AATGATCGAGTTTCATTGTGGGCAATGGGGGCCCACTaGGGAACTGTGAGAACACACCATGGAATTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: NDRVSLWAMGAH*GTVRTHHGIVP Trigger: TGGGACAATTCCATGGTGTGTTCTCACAGTTCCTCAGTGGGCCCCCATTGCCCACAATGAAACTCGATCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS TCA 72 bp | AATCTGCACCTCAGCTCCACCACCTGTGCACGTGTGTaGCTTTGGATAAATCATGTAACTCTCTCAGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: NLHLSSTTCARV*LWINHVTLSAS Trigger: CGAGGCTGAGAGAGTTACATGATTTATCCAAAGTCACACACGTGCACAGGTGGTGGAGCTGAGGTGCAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS GCA 72 bp | GAATGGGAGAATGGCATCCCAGCTGGACCAAGACAGTaGCTAATATGGGTCTTCTGTCCCAAGACAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: EWENGIPAGPRQ*LIWVFCPKTNG Trigger: TCCATTTGTCTTGGGACAGAAGACCCATATTAGGCACTGTCTTGGTCCAGCTGGGATGCCATTCTCCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CAA 72 bp | ACTTTGGATAAATCATGTAACTCTCTCAGCCTCGAATaGTCCATCTGGCACTGCCTGGTGGCCTGGCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: TLDKSCNSLSLE*SIWHCLVAWQL Trigger: AAGCTGCCAGGCCACCAGGCAGTGCCAGATGGACAATTCGAGGCTGAGAGAGTTACATGATTTATCCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CAA 72 bp | GCACCTCAGCTCCACCACCTGTGCACGTGTGTGACTTaGGATAAATCATGTAACTCTCTCAGCCTCGAATTG | + |
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Preference number: 6 (lower is better) Translates to: APQLHHLCTCVT*DKSCNSLSLEL Trigger: CAATTCGAGGCTGAGAGAGTTACATGATTTATCCAAAGTCACACACGTGCACAGGTGGTGGAGCTGAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS GCA 72 bp | GTCAAGCCTGAATCTGCACCTCAGCTCCACCACCTGTaGACGTGTGTGACTTTGGATAAATCATGTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: VKPESAPQLHHL*TCVTLDKSCNS Trigger: AGAGTTACATGATTTATCCAAAGTCACACACGTGCACAGGTGGTGGAGCTGAGGTGCAGATTCAGGCTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660223.1 |
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| CDS CAA 72 bp | AAGATGATAGTCATCTGCTTTTGGACTCTTCTGCTCTaGCCTAGACCACAGTGGACCAAGGGGTTGTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: KMIVICFWTLLL*PRPQWTKGLWC Trigger: ACACCACAACCCCTTGGTCCACTGTGGTCTAGGCAAGAGCAGAAGAGTCCAAAAGCAGATGACTATCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652969.1 ENST00000660223.1 |
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| CDS GCA 72 bp | GAAAAAGTTCAAGACAAATGGAAGATGATAGTCATCTaGTTTTGGACTCTTCTGCTCTTGCCTAGACCACAG | + |
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Preference number: 6 (lower is better) Translates to: EKVQDKWKMIVI*FWTLLLLPRPQ Trigger: CTGTGGTCTAGGCAAGAGCAGAAGAGTCCAAAAGCAGATGACTATCATCTTCCATTTGTCTTGAACTTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652969.1 |
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