Pregenerated sensors for LINC01275 (Homo sapiens)
Ensembl gene IDs: ENSG00000237595Ensembl transcript IDs: ENST00000435301.2, ENST00000615503.1, ENST00000652554.1, ENST00000658174.1, ENST00000669734.1, ENST00000670975.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGGTGGTTCCTCTGTGGGCTTCCCCTGGGCTTGTGCATGCGGCTaGTTCTGGCTTTCAGCTGTGCTGGCTGGGCTAAGGTGGCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: AGGSSVGFPWACACG*FWLSAVLAGLRWPH Trigger: ATGAGGCCACCTTAGCCCAGCCAGCACAGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS GCA 90 bp | GTGTTGGCTGGTGGTTCCTCTGTGGGCTTCCCCTGGGCTTGTGCATaGGGCTGCTTCTGGCTTTCAGCTGTGCTGGCTGGGCTAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VLAGGSSVGFPWACA*GCFWLSAVLAGLRW Trigger: CCACCTTAGCCCAGCCAGCACAGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACCACCAGCCAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS GCA 90 bp | CTGTGTGTTGGCTGGTGGTTCCTCTGTGGGCTTCCCCTGGGCTTGTaGATGCGGCTGCTTCTGGCTTTCAGCTGTGCTGGCTGGGCTAAG | + |
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Preference number: 5 (lower is better) Translates to: LCVGWWFLCGLPLGL*MRLLLAFSCAGWAK Trigger: CTTAGCCCAGCCAGCACAGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACCACCAGCCAACACACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 90 bp | GGTTCCTCTGTGGGCTTCCCCTGGGCTTGTGCATGCGGCTGCTTCTaGCTTTCAGCTGTGCTGGCTGGGCTAAGGTGGCCTCATTCATGG | + |
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Preference number: 5 (lower is better) Translates to: GSSVGFPWACACGCF*LSAVLAGLRWPHSW Trigger: CCATGAATGAGGCCACCTTAGCCCAGCCAGCACAGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 90 bp | CCCTTCTATCTGGTCACTCCACCATCTGGTCGGTCAACCAACAGGTaGCTTCCACCTCAGGGCCCAAGAAGGTTGCTCATGCTGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PFYLVTPPSGRSTNR*LPPQGPRRLLMLQP Trigger: CGGCTGCAGCATGAGCAACCTTCTTGGGCCCTGAGGTGGAAGCCACCTGTTGGTTGACCGACCAGATGGTGGAGTGACCAGATAGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000615503.1 ENST00000652554.1 ENST00000670975.1 |
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| CDS CCA 90 bp | CTGGGCTTGTGCATGCGGCTGCTTCTGGCTTTCAGCTGTGCTGGCTaGGCTAAGGTGGCCTCATTCATGGTGACATGGGATTCAGATGGG | + |
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Preference number: 5 (lower is better) Translates to: LGLCMRLLLAFSCAG*AKVASFMVTWDSDG Trigger: CCCATCTGAATCCCATGTCACCATGAATGAGGCCACCTTAGCCCAGCCAGCACAGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 90 bp | CTGGGGTTTGCTTGCAATTCTGTGTGTTGGCTGGTGGTTCCTCTGTaGGCTTCCCCTGGGCTTGTGCATGCGGCTGCTTCTGGCTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LGFACNSVCWLVVPL*ASPGLVHAAASGFQ Trigger: CTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACCACCAGCCAACACACAGAATTGCAAGCAAACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS GCA 90 bp | AAGCACGTAGTCACGCTGCGCTGTGTTGCTTCCCTCCGCTTCTTTTaGTCCTGGGTAAATAGGGCGGGGGAGGTGAGATTGGAAGGATGC | + |
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Preference number: 5 (lower is better) Translates to: KHVVTLRCVASLRFF*SWVNRAGEVRLEGC Trigger: GCATCCTTCCAATCTCACCTCCCCCGCCCTATTTACCCAGGAGCAAAAGAAGCGGAGGGAAGCAACACAGCGCAGCGTGACTACGTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000652554.1 ENST00000669734.1 ENST00000670975.1 |
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| CDS CCA 90 bp | AGATTACTCTTTGACTCATCCGGCCCTCCAAGGCAGGGCAGGGAATaGGGTCACTTACCTAAGGCACCTGGGTTGCCTGCATGCCCGTTA | + |
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Preference number: 5 (lower is better) Translates to: RLLFDSSGPPRQGRE*GHLPKAPGLPACPL Trigger: TAACGGGCATGCAGGCAACCCAGGTGCCTTAGGTAAGTGACCCCATTCCCTGCCCTGCCTTGGAGGGCCGGATGAGTCAAAGAGTAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000435301.2 ENST00000669734.1 |
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| CDS CCA 90 bp | GTAGTCACGCTGCGCTGTGTTGCTTCCCTCCGCTTCTTTTGCTCCTaGGTAAATAGGGCGGGGGAGGTGAGATTGGAAGGATGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: VVTLRCVASLRFFCS*VNRAGEVRLEGCQE Trigger: TTCCTGGCATCCTTCCAATCTCACCTCCCCCGCCCTATTTACCCAGGAGCAAAAGAAGCGGAGGGAAGCAACACAGCGCAGCGTGACTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000652554.1 ENST00000669734.1 ENST00000670975.1 |
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| CDS CCA 90 bp | AAACACCAGCCCAGGGCTTCCAGGAAACTGCTCCTCGCTCCTTGTTaGCCCACAGACTTCATTTGTACTCACTGCATGCCCGTTAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: KHQPRASRKLLLAPC*PTDFICTHCMPVRR Trigger: CCTCCTAACGGGCATGCAGTGAGTACAAATGAAGTCTGTGGGCCAACAAGGAGCGAGGAGCAGTTTCCTGGAAGCCCTGGGCTGGTGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS CCA 90 bp | AGGCACAGGGAGGTCCAGCCAAGTGTGTTTAGGATCGCTGGAAACTaGAACCAACCTGCATGCCCGTTAGGAGGAGACAGATCAAGCACG | + |
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Preference number: 5 (lower is better) Translates to: RHREVQPSVFRIAGN*NQPACPLGGDRSST Trigger: CGTGCTTGATCTGTCTCCTCCTAACGGGCATGCAGGTTGGTTCCAGTTTCCAGCGATCCTAAACACACTTGGCTGGACCTCCCTGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658174.1 |
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| CDS GCA 90 bp | TGGCACTCTCTGCTGTACAGGAGGCTGGAGAATGCAGTTGTCCTCTaGGGAGACCAACTTAAAAGCTGGGGTTCTGCATGCCCGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: WHSLLYRRLENAVVL*GDQLKSWGSACPLG Trigger: TCCTAACGGGCATGCAGAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATTCTCCAGCCTCCTGTACAGCAGAGAGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615503.1 ENST00000670975.1 |
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| CDS TCA 90 bp | TGGCTTTCAGCTGTGCTGGCTGGGCTAAGGTGGCCTCATTCATGGTaGCATGGGATTCAGATGGGATCCAGATGGGATTCAGATAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: WLSAVLAGLRWPHSW*HGIQMGSRWDSDSS Trigger: GCTGCTATCTGAATCCCATCTGGATCCCATCTGAATCCCATGTCACCATGAATGAGGCCACCTTAGCCCAGCCAGCACAGCTGAAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 90 bp | GGATTCAGATGGGATCCAGATGGGATTCAGATAGCAGCTGATTGTTaGCTGGGGCACCTCTGTACTGCATCTGGGCTCTCATCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: GFRWDPDGIQIAADC*LGHLCTASGLSSSR Trigger: TCTGGATGATGAGAGCCCAGATGCAGTACAGAGGTGCCCCAGCCAACAATCAGCTGCTATCTGAATCCCATCTGGATCCCATCTGAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS GCA 90 bp | CTATCTCAAAGCAAGTCAAACACCAGCCCAGGGCTTCCAGGAAACTaGTCCTCGCTCCTTGTTGGCCCACAGACTTCATTTGTACTCACT | + |
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Preference number: 5 (lower is better) Translates to: LSQSKSNTSPGLPGN*SSLLVGPQTSFVLT Trigger: AGTGAGTACAAATGAAGTCTGTGGGCCAACAAGGAGCGAGGAGCAGTTTCCTGGAAGCCCTGGGCTGGTGTTTGACTTGCTTTGAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS GCA 90 bp | TGGCACTCTCTGCTGTACAGGAGGCTGGAGAATGCAGTTGTCCTCTaGGGAGACCAACTTAAAAGCTGGGGTTTGCTTGCAATTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: WHSLLYRRLENAVVL*GDQLKSWGLLAILC Trigger: ACACAGAATTGCAAGCAAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATTCTCCAGCCTCCTGTACAGCAGAGAGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS CCA 90 bp | AGGCTGGAGAATGCAGTTGTCCTCTGCGGAGACCAACTTAAAAGCTaGGGTTTGCTTGCAATTCTGTGTGTTGGCTGGTGGTTCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RLENAVVLCGDQLKS*GLLAILCVGWWFLC Trigger: ACAGAGGAACCACCAGCCAACACACAGAATTGCAAGCAAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATTCTCCAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS CCA 72 bp | GTGGGCTTCCCCTGGGCTTGTGCATGCGGCTGCTTCTaGCTTTCAGCTGTGCTGGCTGGGCTAAGGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VGFPWACACGCF*LSAVLAGLRWP Trigger: AGGCCACCTTAGCCCAGCCAGCACAGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CAA 90 bp | ATTCTGTGTGTTGGCTGGTGGTTCCTCTGTGGGCTTCCCCTGGGCTaGTGCATGCGGCTGCTTCTGGCTTTCAGCTGTGCTGGCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ILCVGWWFLCGLPLG*CMRLLLAFSCAGWA Trigger: AGCCCAGCCAGCACAGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACCACCAGCCAACACACAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 72 bp | TTTGACTCATCCGGCCCTCCAAGGCAGGGCAGGGAATaGGGTCACTTACCTAAGGCACCTGGGTTGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: FDSSGPPRQGRE*GHLPKAPGLPA Trigger: TGCAGGCAACCCAGGTGCCTTAGGTAAGTGACCCCATTCCCTGCCCTGCCTTGGAGGGCCGGATGAGTCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000435301.2 ENST00000669734.1 |
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| CDS CCA 72 bp | TGTGTGTTGGCTGGTGGTTCCTCTGTGGGCTTCCCCTaGGCTTGTGCATGCGGCTGCTTCTGGCTTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CVLAGGSSVGFP*ACACGCFWLSA Trigger: AGCTGAAAGCCAGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACCACCAGCCAACACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 72 bp | TTTGACTCATCCGGCCCTCCAAGGCAGGGCAGGGAATaGGGTCACTTACCTAAGGCACCTGGGTTGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FDSSGPPRQGRE*GHLPKAPGLPL Trigger: CAGAGGCAACCCAGGTGCCTTAGGTAAGTGACCCCATTCCCTGCCCTGCCTTGGAGGGCCGGATGAGTCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658174.1 |
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| CDS CCA 72 bp | GCTTGCAATTCTGTGTGTTGGCTGGTGGTTCCTCTGTaGGCTTCCCCTGGGCTTGTGCATGCGGCTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ACNSVCWLVVPL*ASPGLVHAAAS Trigger: AGAAGCAGCCGCATGCACAAGCCCAGGGGAAGCCCACAGAGGAACCACCAGCCAACACACAGAATTGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS GCA 72 bp | GGCTTCCACCTCAGGGCCCAAGAAGGTTGCTCATGCTaGAGCCGTTTTGTCATATTCCAGCCAGCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GFHLRAQEGCSC*SRFVIFQPAGR Trigger: CCTTCCTGCTGGCTGGAATATGACAAAACGGCTGCAGCATGAGCAACCTTCTTGGGCCCTGAGGTGGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000615503.1 ENST00000652554.1 ENST00000670975.1 |
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| CDS CCA 72 bp | CCCAGGGCTTCCAGGAAACTGCTCCTCGCTCCTTGTTaGCCCACAGACTTCATTTGTACTCACTGCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: PRASRKLLLAPC*PTDFICTHCMP Trigger: GGGCATGCAGTGAGTACAAATGAAGTCTGTGGGCCAACAAGGAGCGAGGAGCAGTTTCCTGGAAGCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS CAA 72 bp | GCCCAGGGCTTCCAGGAAACTGCTCCTCGCTCCTTGTaGGCCCACAGACTTCATTTGTACTCACTGCATGCC | + |
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Preference number: 6 (lower is better) Translates to: AQGFQETAPRSL*AHRLHLYSLHA Trigger: GGCATGCAGTGAGTACAAATGAAGTCTGTGGGCCAACAAGGAGCGAGGAGCAGTTTCCTGGAAGCCCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS GCA 72 bp | CCAACAGGTGGCTTCCACCTCAGGGCCCAAGAAGGTTaGTCATGCTGCAGCCGTTTTGTCATATTCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PTGGFHLRAQEG*SCCSRFVIFQP Trigger: TGGCTGGAATATGACAAAACGGCTGCAGCATGAGCAACCTTCTTGGGCCCTGAGGTGGAAGCCACCTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000615503.1 ENST00000652554.1 ENST00000670975.1 |
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| CDS CAA 72 bp | GCCCAGGGCTTCCAGGAAACTGCTCCTCGCTCCTTGTaGGCCCACAGACTTCATTTGTACTCACTAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AQGFQETAPRSL*AHRLHLYSLAE Trigger: CTCTGCTAGTGAGTACAAATGAAGTCTGTGGGCCAACAAGGAGCGAGGAGCAGTTTCCTGGAAGCCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000435301.2 ENST00000658174.1 ENST00000669734.1 |
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| CDS CAA 72 bp | ACCAACAGGTGGCTTCCACCTCAGGGCCCAAGAAGGTaGCTCATGCTGCAGCCGTTTTGTCATATTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TNRWLPPQGPRR*LMLQPFCHIPA Trigger: GGCTGGAATATGACAAAACGGCTGCAGCATGAGCAACCTTCTTGGGCCCTGAGGTGGAAGCCACCTGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000615503.1 ENST00000652554.1 ENST00000670975.1 |
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| CDS TCA 72 bp | GCTGTGCTGGCTGGGCTAAGGTGGCCTCATTCATGGTaGCATGGGATTCAGATGGGATCCAGATGGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: AVLAGLRWPHSW*HGIQMGSRWDS Trigger: TGAATCCCATCTGGATCCCATCTGAATCCCATGTCACCATGAATGAGGCCACCTTAGCCCAGCCAGCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS GCA 72 bp | AGCAAGTCAAACACCAGCCCAGGGCTTCCAGGAAACTaGTCCTCGCTCCTTGTTGGCCCACAGACTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SKSNTSPGLPGN*SSLLVGPQTSF Trigger: AAATGAAGTCTGTGGGCCAACAAGGAGCGAGGAGCAGTTTCCTGGAAGCCCTGGGCTGGTGTTTGACTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS GCA 72 bp | CTGCTGTACAGGAGGCTGGAGAATGCAGTTGTCCTCTaGGGAGACCAACTTAAAAGCTGGGGTTCTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: LLYRRLENAVVL*GDQLKSWGSAC Trigger: GCATGCAGAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATTCTCCAGCCTCCTGTACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615503.1 ENST00000670975.1 |
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| CDS CCA 72 bp | TGGGATCCAGATGGGATTCAGATAGCAGCTGATTGTTaGCTGGGGCACCTCTGTACTGCATCTGGGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: WDPDGIQIAADC*LGHLCTASGLS Trigger: TGAGAGCCCAGATGCAGTACAGAGGTGCCCCAGCCAACAATCAGCTGCTATCTGAATCCCATCTGGATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 72 bp | GAGGTCCAGCCAAGTGTGTTTAGGATCGCTGGAAACTaGAACCAACCTGCATGCCCGTTAGGAGGAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: EVQPSVFRIAGN*NQPACPLGGDR Trigger: TCTGTCTCCTCCTAACGGGCATGCAGGTTGGTTCCAGTTTCCAGCGATCCTAAACACACTTGGCTGGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658174.1 |
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| CDS CAA 72 bp | GGCACTCTCTGCTGTACAGGAGGCTGGAGAATGCAGTaGTCCTCTGCGGAGACCAACTTAAAAGCTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GTLCCTGGWRMQ*SSAETNLKAGV Trigger: AACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATTCTCCAGCCTCCTGTACAGCAGAGAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000615503.1 ENST00000652554.1 ENST00000670975.1 |
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| CDS CAA 72 bp | TCAGGGCCCAAGAAGGTTGCTCATGCTGCAGCCGTTTaGTCATATTCCAGCCAGCAGGAAGGGGCAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SGPKKVAHAAAV*SYSSQQEGAKK Trigger: CTTCTTTGCCCCTTCCTGCTGGCTGGAATATGACAAAACGGCTGCAGCATGAGCAACCTTCTTGGGCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000615503.1 ENST00000652554.1 ENST00000670975.1 |
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| CDS CAA 90 bp | ATGCAGTTGTCCTCTGCGGAGACCAACTTAAAAGCTGGGGTTTGCTaGCAATTCTGTGTGTTGGCTGGTGGTTCCTCTGTGGGCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MQLSSAETNLKAGVC*QFCVLAGGSSVGFP Trigger: GGGGAAGCCCACAGAGGAACCACCAGCCAACACACAGAATTGCAAGCAAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS GCA 72 bp | CTGCTGTACAGGAGGCTGGAGAATGCAGTTGTCCTCTaGGGAGACCAACTTAAAAGCTGGGGTTTGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLYRRLENAVVL*GDQLKSWGLLA Trigger: TGCAAGCAAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATTCTCCAGCCTCCTGTACAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS TCA 72 bp | ATTCAGATGGGATCCAGATGGGATTCAGATAGCAGCTaGTTGTTGGCTGGGGCACCTCTGTACTGCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: IQMGSRWDSDSS*LLAGAPLYCIW Trigger: CCAGATGCAGTACAGAGGTGCCCCAGCCAACAATCAGCTGCTATCTGAATCCCATCTGGATCCCATCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435301.2 ENST00000652554.1 ENST00000658174.1 ENST00000669734.1 |
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| CDS CCA 72 bp | AATGCAGTTGTCCTCTGCGGAGACCAACTTAAAAGCTaGGGTTCTGCATGCCCGTTAGGAGGAGACAGATCA | + |
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Preference number: 6 (lower is better) Translates to: NAVVLCGDQLKS*GSACPLGGDRS Trigger: TGATCTGTCTCCTCCTAACGGGCATGCAGAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000615503.1 ENST00000670975.1 |
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| CDS CAA 72 bp | TCCTCTGCGGAGACCAACTTAAAAGCTGGGGTTTGCTaGCAATTCTGTGTGTTGGCTGGTGGTTCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSAETNLKAGVC*QFCVLAGGSSV Trigger: CACAGAGGAACCACCAGCCAACACACAGAATTGCAAGCAAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS CAA 72 bp | GTTGTCCTCTGCGGAGACCAACTTAAAAGCTGGGGTTaGCTTGCAATTCTGTGTGTTGGCTGGTGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VVLCGDQLKSWG*LAILCVGWWFL Trigger: GAGGAACCACCAGCCAACACACAGAATTGCAAGCAAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS CCA 72 bp | AATGCAGTTGTCCTCTGCGGAGACCAACTTAAAAGCTaGGGTTTGCTTGCAATTCTGTGTGTTGGCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: NAVVLCGDQLKS*GLLAILCVGWW Trigger: CCACCAGCCAACACACAGAATTGCAAGCAAACCCCAGCTTTTAAGTTGGTCTCCGCAGAGGACAACTGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652554.1 |
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| CDS GCA 72 bp | ATCAACAATAACGGTGAGCATTTATTGAGCACGTACTaGACGCCAGGCCATGTTATAACCTTACTTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: INNNGEHLLSTY*TPGHVITLLQP Trigger: AGGCTGAAGTAAGGTTATAACATGGCCTGGCGTGCAGTACGTGCTCAATAAATGCTCACCGTTATTGTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658174.1 ENST00000669734.1 |
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