Pregenerated sensors for LINC01273 (Homo sapiens)
Ensembl gene IDs: ENSG00000231742Ensembl transcript IDs: ENST00000411453.3, ENST00000427333.6, ENST00000659473.1, ENST00000661469.1, ENST00000664618.1, ENST00000665536.1, ENST00000668708.1, ENST00000670659.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCCTCAAGAGGAAAGGGTGGCCTCCTTCACCAGGAAGCCGGCGCTaGTCCCGGCCCTGTCGCCGGGAACGTAAGCAACTGGGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: PLKRKGWPPSPGSRR*SRPCRRERKQLGLF Trigger: AAAGAGGCCCAGTTGCTTACGTTCCCGGCGACAGGGCCGGGACCAGCGCCGGCTTCCTGGTGAAGGAGGCCACCCTTTCCTCTTGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000661469.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 90 bp | CACCGGGTGCTGACATGCATACTCAGACCCCTCAAGAGGAAAGGGTaGCCTCCTTCACCAGGAAGCCGGCGCTGGTCCCGGCCCTGTCGC | + |
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Preference number: 5 (lower is better) Translates to: HRVLTCILRPLKRKG*PPSPGSRRWSRPCR Trigger: GCGACAGGGCCGGGACCAGCGCCGGCTTCCTGGTGAAGGAGGCCACCCTTTCCTCTTGAGGGGTCTGAGTATGCATGTCAGCACCCGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000661469.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 90 bp | GAAGCCGGCGCTGGTCCCGGCCCTGTCGCCGGGAACGTAAGCAACTaGGCCTCTTTTTCCTGGGCATTTATGCTGTGCCAGGCACTGCCC | + |
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Preference number: 5 (lower is better) Translates to: EAGAGPGPVAGNVSN*ASFSWAFMLCQALP Trigger: GGGCAGTGCCTGGCACAGCATAAATGCCCAGGAAAAAGAGGCCCAGTTGCTTACGTTCCCGGCGACAGGGCCGGGACCAGCGCCGGCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000661469.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS TCA 90 bp | GGTGAAGGCCCCTGGTCAGCTGGGTGCTGGGTGCCCACCGGGTGCTaGCATGCATACTCAGACCCCTCAAGAGGAAAGGGTGGCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GEGPWSAGCWVPTGC*HAYSDPSRGKGGLL Trigger: AAGGAGGCCACCCTTTCCTCTTGAGGGGTCTGAGTATGCATGTCAGCACCCGGTGGGCACCCAGCACCCAGCTGACCAGGGGCCTTCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000661469.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS TCA 90 bp | TGGACGGGCTCCATGTGGCACTGGGCCAAAGAAACCAGCCTCCACTaGGGGCCTCCTGTGTGCCCAGCTGTATTCCCACGTCAACCCCAT | + |
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Preference number: 5 (lower is better) Translates to: WTGSMWHWAKETSLH*GPPVCPAVFPRQPH Trigger: ATGGGGTTGACGTGGGAATACAGCTGGGCACACAGGAGGCCCTCAGTGGAGGCTGGTTTCTTTGGCCCAGTGCCACATGGAGCCCGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670659.1 |
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| CDS CCA 90 bp | GTGCAGGATCTCAAGGCAGACCCTGAGCTTTACAGAGACGTTGAGTaGCCACAATCAGGCCCCCAGCTCAGCCAGTGGACGGGCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: VQDLKADPELYRDVE*PQSGPQLSQWTGSM Trigger: CATGGAGCCCGTCCACTGGCTGAGCTGGGGGCCTGATTGTGGCCACTCAACGTCTCTGTAAAGCTCAGGGTCTGCCTTGAGATCCTGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 90 bp | GTGTTGTGGTCTGTGTTGGAATGTTCTTCCAGGCAGCCCCCACTGTaGCTCCAAGCCCTGGCTTCTCGGACCCAGCTTCCTTCTGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: VLWSVLECSSRQPPL*LQALASRTQLPSVP Trigger: CGGGACAGAAGGAAGCTGGGTCCGAGAAGCCAGGGCTTGGAGCCACAGTGGGGGCTGCCTGGAAGAACATTCCAACACAGACCACAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668708.1 |
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| CDS CCA 90 bp | ATAGGTGTTGTGGTCTGTGTTGGAATGTTCAGGCAGCCCCCACTGTaGCTCCAAGCCCTGGCTTCTCGGACCCAGCTTCCTTCTGTCCCG | + |
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Preference number: 5 (lower is better) Translates to: IGVVVCVGMFRQPPL*LQALASRTQLPSVP Trigger: CGGGACAGAAGGAAGCTGGGTCCGAGAAGCCAGGGCTTGGAGCCACAGTGGGGGCTGCCTGAACATTCCAACACAGACCACAACACCTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659473.1 |
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| CDS GCA 90 bp | AGTGAGGTGAGATGGGTCCCCAAGGCAGGGCCACTCCGTGGTAAGTaGAGGATCTCAAGGCAGACCCTGAGCTTTACAGAGACGTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SEVRWVPKAGPLRGK*RISRQTLSFTETLS Trigger: ACTCAACGTCTCTGTAAAGCTCAGGGTCTGCCTTGAGATCCTGCACTTACCACGGAGTGGCCCTGCCTTGGGGACCCATCTCACCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS TCA 90 bp | TCTGAAATGCCTAGGGTGGTCTCCCTCTTCCAGACTGGCCCCCAATaGGACACCAGTGGTGCTGTCGTTTACAGAGTGGCCACAGTGCTA | + |
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Preference number: 5 (lower is better) Translates to: SEMPRVVSLFQTGPQ*DTSGAVVYRVATVL Trigger: TAGCACTGTGGCCACTCTGTAAACGACAGCACCACTGGTGTCTCATTGGGGGCCAGTCTGGAAGAGGGAGACCACCCTAGGCATTTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 90 bp | ACTGAGCACAATGTTTTCCAGGTCCATAGGTGTTGTGGTCTGTGTTaGAATGTTCTTCCTGCCACCTTGCCGTCAGCGCCTTCCCTCGCG | + |
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Preference number: 5 (lower is better) Translates to: TEHNVFQVHRCCGLC*NVLPATLPSAPSLA Trigger: CGCGAGGGAAGGCGCTGACGGCAAGGTGGCAGGAAGAACATTCCAACACAGACCACAACACCTATGGACCTGGAAAACATTGTGCTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000411453.3 ENST00000427333.6 ENST00000661469.1 ENST00000665536.1 |
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| CDS GCA 90 bp | ATGTTTTCCAGGTCCATAGGTGTTGTGGTCTGTGTTGGAATGTTCTaGCACCTTGCCGTCAGCGCCTTCCCTCGCGTTAATCACTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: MFSRSIGVVVCVGMF*HLAVSAFPRVNHCS Trigger: TGAACAGTGATTAACGCGAGGGAAGGCGCTGACGGCAAGGTGGCAGAACATTCCAACACAGACCACAACACCTATGGACCTGGAAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664618.1 |
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| CDS CCA 90 bp | ACTGAGCACAATGTTTTCCAGGTCCATAGGTGTTGTGGTCTGTGTTaGAATGTTCTTCCTGGCCTTTCTGCATCTCGGCTCGTCCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: TEHNVFQVHRCCGLC*NVLPGLSASRLVRP Trigger: AGGACGGACGAGCCGAGATGCAGAAAGGCCAGGAAGAACATTCCAACACAGACCACAACACCTATGGACCTGGAAAACATTGTGCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670659.1 |
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| CDS CCA 90 bp | ACCCCCACTCAAAGGCAGCCATTCTGTCACTTTGTGTCTTTTTGCTaGAATGTGTCCCTCATACAACATTGTCCTTCTGTGTCTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TPTQRQPFCHFVSFC*NVSLIQHCPSVSGF Trigger: GAAGCCAGACACAGAAGGACAATGTTGTATGAGGGACACATTCCAGCAAAAAGACACAAAGTGACAGAATGGCTGCCTTTGAGTGGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 90 bp | TGCACCACTGCAGTCCAGCCTCATACAACATTGTCCTTCTGTGTCTaGCTTCTTTCACTGAGCACAATGTTTTCCAGGTCCATAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: CTTAVQPHTTLSFCV*LLSLSTMFSRSIGV Trigger: AACACCTATGGACCTGGAAAACATTGTGCTCAGTGAAAGAAGCCAGACACAGAAGGACAATGTTGTATGAGGCTGGACTGCAGTGGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664618.1 |
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| CDS CCA 90 bp | CTGGGCAACAGAATAAGACCTCATACAACATTGTCCTTCTGTGTCTaGCTTCTTTCACTGAGCACAATGTTTTCCAGGTCCATAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LGNRIRPHTTLSFCV*LLSLSTMFSRSIGV Trigger: AACACCTATGGACCTGGAAAACATTGTGCTCAGTGAAAGAAGCCAGACACAGAAGGACAATGTTGTATGAGGTCTTATTCTGTTGCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427333.6 ENST00000661469.1 |
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| CDS CCA 90 bp | TTTTTGCTGGAATGTGTCCCTCATACAACATTGTCCTTCTGTGTCTaGCTTCTTTCACTGAGCACAATGTTTTCCAGGTCCATAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: FLLECVPHTTLSFCV*LLSLSTMFSRSIGV Trigger: AACACCTATGGACCTGGAAAACATTGTGCTCAGTGAAAGAAGCCAGACACAGAAGGACAATGTTGTATGAGGGACACATTCCAGCAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS GCA 72 bp | GCTGGCCTAGGGTGGAGCGCCTCCAGCTGTGGCCAATaGTTCACCTGGCCTTTCTGCATCTCGGCTCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: AGLGWSASSCGQ*FTWPFCISARP Trigger: CGGACGAGCCGAGATGCAGAAAGGCCAGGTGAAGCATTGGCCACAGCTGGAGGCGCTCCACCCTAGGCCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659473.1 ENST00000668708.1 |
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| CDS CCA 72 bp | GACTCTCCCACAGGGAACGGGTTACAGAGACGACGGTaGAGGCAGAGGCCGAACGGGATGGGGAGGACGCTC | + |
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Preference number: 6 (lower is better) Translates to: DSPTGNGLQRRR*RQRPNGMGRTL Trigger: GAGCGTCCTCCCCATCCCGTTCGGCCTCTGCCTCCACCGTCGTCTCTGTAACCCGTTCCCTGTGGGAGAGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000411453.3 ENST00000427333.6 ENST00000661469.1 ENST00000664618.1 ENST00000665536.1 |
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| CDS CCA 72 bp | GGGTGGAGCGCCTCCAGCTGTGGCCAATGCTTCACCTaGCCTTTCTGCATCTCGGCTCGTCCGTCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GWSASSCGQCFT*PFCISARPSSV Trigger: CACAGAGGACGGACGAGCCGAGATGCAGAAAGGCCAGGTGAAGCATTGGCCACAGCTGGAGGCGCTCCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659473.1 ENST00000668708.1 |
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| CDS CCA 72 bp | GTTGAGTGGCCACAATCAGGCCCCCAGCTCAGCCAGTaGACGGGCTCCATGTGGCACTGGGCCAAAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: VEWPQSGPQLSQ*TGSMWHWAKET Trigger: GGTTTCTTTGGCCCAGTGCCACATGGAGCCCGTCCACTGGCTGAGCTGGGGGCCTGATTGTGGCCACTCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 72 bp | GCTGGTCCCGGCCCTGTCGCCGGGAACGTAAGCAACTaGGCCTCTTTTTCCTGGGCATTTATGCTGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AGPGPVAGNVSN*ASFSWAFMLCQ Trigger: CTGGCACAGCATAAATGCCCAGGAAAAAGAGGCCCAGTTGCTTACGTTCCCGGCGACAGGGCCGGGACCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000661469.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 72 bp | GTGGTCTGTGTTGGAATGTTCAGGCAGCCCCCACTGTaGCTCCAAGCCCTGGCTTCTCGGACCCAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VVCVGMFRQPPL*LQALASRTQLP Trigger: AGGAAGCTGGGTCCGAGAAGCCAGGGCTTGGAGCCACAGTGGGGGCTGCCTGAACATTCCAACACAGACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659473.1 |
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| CDS TCA 72 bp | CCTAGGGTGGTCTCCCTCTTCCAGACTGGCCCCCAATaGGACACCAGTGGTGCTGTCGTTTACAGAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRVVSLFQTGPQ*DTSGAVVYRVA Trigger: GGCCACTCTGTAAACGACAGCACCACTGGTGTCTCATTGGGGGCCAGTCTGGAAGAGGGAGACCACCCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 72 bp | CTCAAGGCAGACCCTGAGCTTTACAGAGACGTTGAGTaGCCACAATCAGGCCCCCAGCTCAGCCAGTGGACG | + |
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Preference number: 6 (lower is better) Translates to: LKADPELYRDVE*PQSGPQLSQWT Trigger: CGTCCACTGGCTGAGCTGGGGGCCTGATTGTGGCCACTCAACGTCTCTGTAAAGCTCAGGGTCTGCCTTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CAA 90 bp | GGTAAGTGCAGGATCTCAAGGCAGACCCTGAGCTTTACAGAGACGTaGAGTGGCCACAATCAGGCCCCCAGCTCAGCCAGTGGACGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GKCRISRQTLSFTET*SGHNQAPSSASGRA Trigger: AGCCCGTCCACTGGCTGAGCTGGGGGCCTGATTGTGGCCACTCAACGTCTCTGTAAAGCTCAGGGTCTGCCTTGAGATCCTGCACTTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS GCA 72 bp | AGATGGGTCCCCAAGGCAGGGCCACTCCGTGGTAAGTaGAGGATCTCAAGGCAGACCCTGAGCTTTACAGAG | + |
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Preference number: 6 (lower is better) Translates to: RWVPKAGPLRGK*RISRQTLSFTE Trigger: CTCTGTAAAGCTCAGGGTCTGCCTTGAGATCCTGCACTTACCACGGAGTGGCCCTGCCTTGGGGACCCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS GCA 72 bp | CCTCTTCCAGACTGGCCCCCAATGAGACACCAGTGGTaGTGTCGTTTACAGAGTGGCCACAGTGCTACCACG | + |
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Preference number: 6 (lower is better) Translates to: PLPDWPPMRHQW*CRLQSGHSATT Trigger: CGTGGTAGCACTGTGGCCACTCTGTAAACGACAGCACCACTGGTGTCTCATTGGGGGCCAGTCTGGAAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 72 bp | CTCCCTCTTCCAGACTGGCCCCCAATGAGACACCAGTaGTGCTGTCGTTTACAGAGTGGCCACAGTGCTACC | + |
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Preference number: 6 (lower is better) Translates to: LPLPDWPPMRHQ*CCRLQSGHSAT Trigger: GGTAGCACTGTGGCCACTCTGTAAACGACAGCACCACTGGTGTCTCATTGGGGGCCAGTCTGGAAGAGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 72 bp | CCCAATGAGACACCAGTGGTGCTGTCGTTTACAGAGTaGCCACAGTGCTACCACGGGAGGTTAGTGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: PNETPVVLSFTE*PQCYHGRLVDG Trigger: GCCATCCACTAACCTCCCGTGGTAGCACTGTGGCCACTCTGTAAACGACAGCACCACTGGTGTCTCATTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CAA 72 bp | AGGATCTCAAGGCAGACCCTGAGCTTTACAGAGACGTaGAGTGGCCACAATCAGGCCCCCAGCTCAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RISRQTLSFTET*SGHNQAPSSAS Trigger: ACTGGCTGAGCTGGGGGCCTGATTGTGGCCACTCAACGTCTCTGTAAAGCTCAGGGTCTGCCTTGAGATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CCA 72 bp | AGAGTGGCCACAGTGCTACCACGGGAGGTTAGTGGATaGCTGAGTCATGAACCAGAAAGGAGGGCAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: RVATVLPREVSG*LSHEPERRAEV Trigger: CACTTCTGCCCTCCTTTCTGGTTCATGACTCAGCCATCCACTAACCTCCCGTGGTAGCACTGTGGCCACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS GCA 72 bp | AGGTCCATAGGTGTTGTGGTCTGTGTTGGAATGTTCTaGCACCTTGCCGTCAGCGCCTTCCCTCGCGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: RSIGVVVCVGMF*HLAVSAFPRVN Trigger: ATTAACGCGAGGGAAGGCGCTGACGGCAAGGTGGCAGAACATTCCAACACAGACCACAACACCTATGGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664618.1 |
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| CDS CCA 72 bp | CCTGTATTCCATCCCTTCTGTCTGAAATGCCTAGGGTaGTCTCCCTCTTCCAGACTGGCCCCCAATGAGACA | + |
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Preference number: 6 (lower is better) Translates to: PVFHPFCLKCLG*SPSSRLAPNET Trigger: TGTCTCATTGGGGGCCAGTCTGGAAGAGGGAGACCACCCTAGGCATTTCAGACAGAAGGGATGGAATACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CAA 90 bp | GTCCATAGGTGTTGTGGTCTGTGTTGGAATGTTCTTCCTGCCACCTaGCCGTCAGCGCCTTCCCTCGCGTTAATCACTGTTCAGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VHRCCGLCWNVLPAT*PSAPSLALITVQPE Trigger: TTCTGGCTGAACAGTGATTAACGCGAGGGAAGGCGCTGACGGCAAGGTGGCAGGAAGAACATTCCAACACAGACCACAACACCTATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000411453.3 ENST00000427333.6 ENST00000661469.1 ENST00000665536.1 |
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| CDS GCA 72 bp | AGCAACTGGGCCTCTTTTTCCTGGGCATTTATGCTGTaGCAGGCACTGCCCGAGGGGGTTGTATTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SNWASFSWAFML*QALPEGVVFLH Trigger: ATGAAGAAATACAACCCCCTCGGGCAGTGCCTGGCACAGCATAAATGCCCAGGAAAAAGAGGCCCAGTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000661469.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS CAA 90 bp | ATCCACCTCTTCTCACCCCCACTCAAAGGCAGCCATTCTGTCACTTaGTGTCTTTTTGCTGGAATGTGTCCCTGTAGTCCCAGCTACTCG | + |
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Preference number: 6 (lower is better) Translates to: IHLFSPPLKGSHSVT*CLFAGMCPCSPSYS Trigger: CGAGTAGCTGGGACTACAGGGACACATTCCAGCAAAAAGACACAAAGTGACAGAATGGCTGCCTTTGAGTGGGGGTGAGAAGAGGTGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661469.1 |
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| CDS CCA 72 bp | AATGTTTTCCAGGTCCATAGGTGTTGTGGTCTGTGTTaGAATGTTCTTCCTGCCACCTTGCCGTCAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: NVFQVHRCCGLC*NVLPATLPSAP Trigger: AGGCGCTGACGGCAAGGTGGCAGGAAGAACATTCCAACACAGACCACAACACCTATGGACCTGGAAAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000411453.3 ENST00000427333.6 ENST00000661469.1 ENST00000665536.1 |
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| CDS CCA 72 bp | AATGTTTTCCAGGTCCATAGGTGTTGTGGTCTGTGTTaGAATGTTCTTCCTGGCCTTTCTGCATCTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: NVFQVHRCCGLC*NVLPGLSASRL Trigger: GAGCCGAGATGCAGAAAGGCCAGGAAGAACATTCCAACACAGACCACAACACCTATGGACCTGGAAAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670659.1 |
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| CDS CAA 90 bp | TTTCCATCTCTCAGAATCTGCCCATCCCAGGTACCTCATACAACATaGTCCTTCTGTGTCTGGCTTCTTTCACTGAGCACAATGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FPSLRICPSQVPHTT*SFCVWLLSLSTMFS Trigger: GGAAAACATTGTGCTCAGTGAAAGAAGCCAGACACAGAAGGACAATGTTGTATGAGGTACCTGGGATGGGCAGATTCTGAGAGATGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665536.1 |
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| CDS CCA 72 bp | CAAAGGCAGCCATTCTGTCACTTTGTGTCTTTTTGCTaGAATGTGTCCCTCATACAACATTGTCCTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: QRQPFCHFVSFC*NVSLIQHCPSV Trigger: CACAGAAGGACAATGTTGTATGAGGGACACATTCCAGCAAAAAGACACAAAGTGACAGAATGGCTGCCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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| CDS GCA 72 bp | ACTCAAAGGCAGCCATTCTGTCACTTTGTGTCTTTTTaGTGGAATGTGTCCCTCATACAACATTGTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TQRQPFCHFVSF*WNVSLIQHCPS Trigger: AGAAGGACAATGTTGTATGAGGGACACATTCCAGCAAAAAGACACAAAGTGACAGAATGGCTGCCTTTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000411453.3 ENST00000659473.1 ENST00000668708.1 ENST00000670659.1 |
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