Pregenerated sensors for LINC01271 (Homo sapiens)
Ensembl gene IDs: ENSG00000233077Ensembl transcript IDs: ENST00000441214.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTCCCAGAGGCAAAGCCCTTGGCTGGGGTCCTGGGCCCAGCCCGGTaGCTCAGGCGGAGAAGATGCTCCCAGGCCTCCCGCTGGATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPEAKPLAGVLGPAR*LRRRRCSQASRWIW Trigger: CCAAATCCAGCGGGAGGCCTGGGAGCATCTTCTCCGCCTGAGTCACCGGGCTGGGCCCAGGACCCCAGCCAAGGGCTTTGCCTCTGGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | CCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTTGGAGCCGAGCCTaGACACCTCCGTGTCCTTCCCCCGGCAGAGTGCTGCCAGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPAQCRLVCFWSRA*TPPCPSPGRVLPAR Trigger: GCGTGCTGGCAGCACTCTGCCGGGGGAAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 90 bp | GAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTaGTTTTGGAGCCGAGCCTGGACACCTCCGTGTCCTTCCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPSYFSPAPAQCRLV*FWSRAWTPPCPSPG Trigger: GCCGGGGGAAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | CCAAAGCTCTTTTCTTCCCAGAGGCAAAGCCCTTGGCTGGGGTCCTaGGCCCAGCCCGGTGACTCAGGCGGAGAAGATGCTCCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PKLFSSQRQSPWLGS*AQPGDSGGEDAPRP Trigger: AGGCCTGGGAGCATCTTCTCCGCCTGAGTCACCGGGCTGGGCCCAGGACCCCAGCCAAGGGCTTTGCCTCTGGGAAGAAAAGAGCTTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | GCTGGACTCCAAAGCTCTTTTCTTCCCAGAGGCAAAGCCCTTGGCTaGGGTCCTGGGCCCAGCCCGGTGACTCAGGCGGAGAAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGLQSSFLPRGKALG*GPGPSPVTQAEKML Trigger: GAGCATCTTCTCCGCCTGAGTCACCGGGCTGGGCCCAGGACCCCAGCCAAGGGCTTTGCCTCTGGGAAGAAAAGAGCTTTGGAGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | AGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTTaGAGCCGAGCCTGGACACCTCCGTGTCCTTCCCCCGGCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SYFSPAPAQCRLVCF*SRAWTPPCPSPGRV Trigger: CACTCTGCCGGGGGAAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 90 bp | AAGGGCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTaGAGGCTTGTCTGCTTTTGGAGCCGAGCCTGGACACCTCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KGTVEPSYFSPAPAQ*RLVCFWSRAWTPPC Trigger: ACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCACCGTGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 90 bp | GGACACAGACGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTaGTCCAGCGCAGTGCAGGCTTGTCTGCTTTTGGAGCCGAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHRRKGHGGTQLLLT*SSAVQACLLLEPSL Trigger: CAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCACCGTGCCCTTTTCGTCTGTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | TCACCCCGCACCGCCAGGGTCTCAGCGTGTCTCCCAAAGGTCATGTaGGCCTTTAAGAGGTGGTTGGGTCCTGAGAGCTCTGCCCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SPRTARVSACLPKVM*AFKRWLGPESSALM Trigger: CATAAGGGCAGAGCTCTCAGGACCCAACCACCTCTTAAAGGCCCACATGACCTTTGGGAGACACGCTGAGACCCTGGCGGTGCGGGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 90 bp | TTCCGGAGGAGGAACATAAGACCCAGAGAGGGGAAGGGGTTGGCCTaGGGTCATACAATGTGCAGAGACGAGCTAGAGTTTGCTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FRRRNIRPREGKGLA*GHTMCRDELEFAGR Trigger: TCTCCCAGCAAACTCTAGCTCGTCTCTGCACATTGTATGACCTCAGGCCAACCCCTTCCCCTCTCTGGGTCTTATGTTCCTCCTCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | GTTGGCCTGAGGTCATACAATGTGCAGAGACGAGCTAGAGTTTGCTaGGAGAAGGTGCGGGTGTGTGGACAAGTCAGCATCTATCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGLRSYNVQRRARVC*EKVRVCGQVSIYLP Trigger: TGGGAGATAGATGCTGACTTGTCCACACACCCGCACCTTCTCCCAGCAAACTCTAGCTCGTCTCTGCACATTGTATGACCTCAGGCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | GGATCTAGGGAGCTGACTCCAGTCCTGGAAGCTGTCCCAGAATTCTaGAATGTTGGAATTCAAACGGCCTCCTGCCCATTTTCCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRELTPVLEAVPEF*NVGIQTASCPFSGG Trigger: TCCTCCGGAAAATGGGCAGGAGGCCGTTTGAATTCCAACATTCCAGAATTCTGGGACAGCTTCCAGGACTGGAGTCAGCTCCCTAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | GCCTGGTTCTTGGGCTTATTTTCCTTGGCAAGGCCCCCACGGGAGTaGAATTTCGGCCAAAGGGAGCCCAGTTGTCATCTTCTAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: AWFLGLFSLARPPRE*NFGQREPSCHLLNM Trigger: CATGTTTAGAAGATGACAACTGGGCTCCCTTTGGCCGAAATTCCACTCCCGTGGGGGCCTTGCCAAGGAAAATAAGCCCAAGAACCAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 90 bp | CTGCCAGCACGCTGTCTCAGACTCTCCAGCATCTCCTGGTTGATGTaGATCATGGGGACCACACAAGATTATTTTATAGGCTGCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPARCLRLSSISWLM*IMGTTQDYFIGCTG Trigger: GCCTGTGCAGCCTATAAAATAATCTTGTGTGGTCCCCATGATGCACATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCGTGCTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | GGCAGAGTGCTGCCAGCACGCTGTCTCAGACTCTCCAGCATCTCCTaGTTGATGTGCATCATGGGGACCACACAAGATTATTTTATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRVLPARCLRLSSIS*LMCIMGTTQDYFIG Trigger: GCCTATAAAATAATCTTGTGTGGTCCCCATGATGCACATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCGTGCTGGCAGCACTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | CTGATGTGTCACTTTTGGCCTCAAACTGAGGCAATGGGGACGAAGTaGCTGCGAGGCGCAGTATCTGGCATATGTGTGAGAAACAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LMCHFWPQTEAMGTK*LRGAVSGICVRNNH Trigger: GTGGTTGTTTCTCACACATATGCCAGATACTGCGCCTCGCAGCCACTTCGTCCCCATTGCCTCAGTTTGAGGCCAAAAGTGACACATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 90 bp | CTGCCTGACAGGAAGCAGCACAGAGCTGGACAGGCTTTGAACTCCTaGATCCCACTGTACCTGAAATTAGGCACCTTCAACTTTCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LPDRKQHRAGQALNS*IPLYLKLGTFNFLV Trigger: AACTAGAAAGTTGAAGGTGCCTAATTTCAGGTACAGTGGGATCCAGGAGTTCAAAGCCTGTCCAGCTCTGTGCTGCTTCCTGTCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 90 bp | CAGTCTTTCCTTTATATCCAGAAGAGTCTCTGTGTGGTGCTAACTTaGCTCGAAGACCAAATAATTGCTAGTCTCCCTCCTCCAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSFLYIQKSLCVVLT*LEDQIIASLPPPGL Trigger: GAGGCCTGGAGGAGGGAGACTAGCAATTATTTGGTCTTCGAGGCAAGTTAGCACCACACAGAGACTCTTCTGGATATAAAGGAAAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | GCAAAGCCCTTGGCTGGGGTCCTGGGCCCAGCCCGGTaGCTCAGGCGGAGAAGATGCTCCCAGGCCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AKPLAGVLGPAR*LRRRRCSQASR Trigger: GCGGGAGGCCTGGGAGCATCTTCTCCGCCTGAGTCACCGGGCTGGGCCCAGGACCCCAGCCAAGGGCTTTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | AGGCGGAGAAGATGCTCCCAGGCCTCCCGCTGGATTTaGGGCCCAGGGTCAGCCATGGGGGTAGGCGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: RRRRCSQASRWI*GPGSAMGVGGT Trigger: GGTACCGCCTACCCCCATGGCTGACCCTGGGCCCCAAATCCAGCGGGAGGCCTGGGAGCATCTTCTCCGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | GCGCAGTGCAGGCTTGTCTGCTTTTGGAGCCGAGCCTaGACACCTCCGTGTCCTTCCCCCGGCAGAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AQCRLVCFWSRA*TPPCPSPGRVL Trigger: CAGCACTCTGCCGGGGGAAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | CCCTCGCCATGGGATGACAGCAAGAAGGCCCTTGCTTaGGTGAGCCCCTCCATCTTCGGCTCTCCGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSPWDDSKKALA*VSPSIFGSPAS Trigger: GGAGGCCGGAGAGCCGAAGATGGAGGGGCTCACTCAAGCAAGGGCCTTCTTGCTGTCATCCCATGGCGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | CCTGGACACCTCCGTGTCCTTCCCCCGGCAGAGTGCTaGCAGCACGCTGTCTCAGACTCTCCAGCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGHLRVLPPAEC*QHAVSDSPASP Trigger: AGGAGATGCTGGAGAGTCTGAGACAGCGTGCTGGCAGCACTCTGCCGGGGGAAGGACACGGAGGTGTCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | GAGCCTGGACACCTCCGTGTCCTTCCCCCGGCAGAGTaGTGCCAGCACGCTGTCTCAGACTCTCCAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: EPGHLRVLPPAE*CQHAVSDSPAS Trigger: AGATGCTGGAGAGTCTGAGACAGCGTGCTGGCAGCACTCTGCCGGGGGAAGGACACGGAGGTGTCCAGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | CTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTaGGAGCCGAGCCTGGACACCTCCGTGTCCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LTCSSAVQACLL*EPSLDTSVSFP Trigger: GGGGAAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 90 bp | CAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTaGGAGCCGAGCCTGGACACCTCCGTGTCCTTCCCCCGGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QLLLTCSSAVQACLL*EPSLDTSVSFPRQS Trigger: ACTCTGCCGGGGGAAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 90 bp | CGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTaGTCTGCTTTTGGAGCCGAGCCTGGACACCTCCGTGTCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RWNPATSHLLQRSAG*SAFGAEPGHLRVLP Trigger: GGGAAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | CGCCATGGGATGACAGCAAGAAGGCCCTTGCTTGAGTaGGCCCCTCCATCTTCGGCTCTCCGGCCTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RHGMTARRPLLE*APPSSALRPPG Trigger: TCCTGGAGGCCGGAGAGCCGAAGATGGAGGGGCTCACTCAAGCAAGGGCCTTCTTGCTGTCATCCCATGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | GGTGCCCAGAGGCCTCTGTCTCCAGGGGTGGACATGTaGCCGGGTCTTGCTCTAGTGATTGGTCCAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GAQRPLSPGVDM*PGLALVIGPGM Trigger: CATCCCTGGACCAATCACTAGAGCAAGACCCGGTCACATGTCCACCCCTGGAGACAGAGGCCTCTGGGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | CGAAGTGGCTGCGAGGCGCAGTATCTGGCATATGTGTaGGAAACAACCACAGTGCCCTGGGGAGGGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RSGCEAQYLAYV*ETTTVPWGGAT Trigger: CGTGGCCCCTCCCCAGGGCACTGTGGTTGTTTCTCACACATATGCCAGATACTGCGCCTCGCAGCCACTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | CCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTaGTCTGCTTTTGGAGCCGAGCCTGGACACCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PATSHLLQRSAG*SAFGAEPGHLR Trigger: ACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | TACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTaGTTTTGGAGCCGAGCCTGGACACCTCCGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: YFSPAPAQCRLV*FWSRAWTPPCP Trigger: AGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | GTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTaGAGGCTTGTCTGCTTTTGGAGCCGAGCCTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: VEPSYFSPAPAQ*RLVCFWSRAWT Trigger: TGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | TCCTTGCTGTCTCACGTGCCACCTCTTGCCATGGGATaGCCTCGCCATGGGATGACAGCAAGAAGGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLSHVPPLAMG*PRHGMTARRPL Trigger: CAAGGGCCTTCTTGCTGTCATCCCATGGCGAGGGCATCCCATGGCAAGAGGTGGCACGTGAGACAGCAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | GTTCGGCCATTCCTTGCTGTCTCACGTGCCACCTCTTaGCATGGGATGCCCTCGCCATGGGATGACAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VRPFLAVSRATS*HGMPSPWDDSK Trigger: CTTGCTGTCATCCCATGGCGAGGGCATCCCATGGCAAGAGGTGGCACGTGAGACAGCAAGGAATGGCCGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | CCCACGGGAGTGGAATTTCGGCCAAAGGGAGCCCAGTaGTCATCTTCTAAACATGTTCCCAGGCCGGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTGVEFRPKGAQ*SSSKHVPRPGA Trigger: GGCCCCCGGCCTGGGAACATGTTTAGAAGATGACAACTGGGCTCCCTTTGGCCGAAATTCCACTCCCGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | TGGCTGTGGCCTGATGTGTCACTTTTGGCCTCAAACTaGGGCAATGGGGACGAAGTGGCTGCGAGGCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WLWPDVSLLASN*GNGDEVAARRS Trigger: ACTGCGCCTCGCAGCCACTTCGTCCCCATTGCCTCAGTTTGAGGCCAAAAGTGACACATCAGGCCACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | CGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTaGTCCAGCGCAGTGCAGGCTTGTCTGCTTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RKGHGGTQLLLT*SSAVQACLLLE Trigger: CTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCACCGTGCCCTTTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | AGGGGTGGACATGTGACCGGGTCTTGCTCTAGTGATTaGTCCAGGGATGGGCACATGACTGAGCCTGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RGGHVTGSCSSD*SRDGHMTEPAQ Trigger: TTGGGCAGGCTCAGTCATGTGCCCATCCCTGGACCAATCACTAGAGCAAGACCCGGTCACATGTCCACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | ACCGCCAGGGTCTCAGCGTGTCTCCCAAAGGTCATGTaGGCCTTTAAGAGGTGGTTGGGTCCTGAGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TARVSACLPKVM*AFKRWLGPESS Trigger: AGAGCTCTCAGGACCCAACCACCTCTTAAAGGCCCACATGACCTTTGGGAGACACGCTGAGACCCTGGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | GGCAATGGGGACGAAGTGGCTGCGAGGCGCAGTATCTaGCATATGTGTGAGAAACAACCACAGTGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GNGDEVAARRSI*HMCEKQPQCPG Trigger: CCCAGGGCACTGTGGTTGTTTCTCACACATATGCCAGATACTGCGCCTCGCAGCCACTTCGTCCCCATTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | ATGAAAGTGAGTTCGGCCATTCCTTGCTGTCTCACGTaGCACCTCTTGCCATGGGATGCCCTCGCCATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: MKVSSAIPCCLT*HLLPWDALAMG Trigger: TCCCATGGCGAGGGCATCCCATGGCAAGAGGTGGCACGTGAGACAGCAAGGAATGGCCGAACTCACTTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | CTGGCTTTCTGTCCCTTGCATACAGAAGGTGCTGACTaGCCCCTGCCCCATGGAAGAAGATACTCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LAFCPLHTEGAD*PLPHGRRYSRQ Trigger: CTGCCTGGAGTATCTTCTTCCATGGGGCAGGGGTCAGTCAGCACCTTCTGTATGCAAGGGACAGAAAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | GGGACTGGCTTTCTGTCCCTTGCATACAGAAGGTGCTaGCTGACCCCTGCCCCATGGAAGAAGATACTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GTGFLSLAYRRC*LTPAPWKKILQ Trigger: CTGGAGTATCTTCTTCCATGGGGCAGGGGTCAGTCAGCACCTTCTGTATGCAAGGGACAGAAAGCCAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | CCAGAAGTGCTGGAACGTTCCTGGGATCTAGGGAGCTaGCTCCAGTCCTGGAAGCTGTCCCAGAATTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PEVLERSWDLGS*LQSWKLSQNSG Trigger: TCCAGAATTCTGGGACAGCTTCCAGGACTGGAGTCAGCTCCCTAGATCCCAGGAACGTTCCAGCACTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 90 bp | CAGGCTGTAGTACTCTTTAATGCCTGGTTCTTGGGCTTATTTTCCTaGGCAAGGCCCCCACGGGAGTGGAATTTCGGCCAAAGGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAVVLFNAWFLGLFS*ARPPREWNFGQREP Trigger: GGGCTCCCTTTGGCCGAAATTCCACTCCCGTGGGGGCCTTGCCAAGGAAAATAAGCCCAAGAACCAGGCATTAAAGAGTACTACAGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | TTGGGCTTATTTTCCTTGGCAAGGCCCCCACGGGAGTaGAATTTCGGCCAAAGGGAGCCCAGTTGTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLFSLARPPRE*NFGQREPSCHL Trigger: AAGATGACAACTGGGCTCCCTTTGGCCGAAATTCCACTCCCGTGGGGGCCTTGCCAAGGAAAATAAGCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | GCGTGTCTCCCAAAGGTCATGTGGGCCTTTAAGAGGTaGTTGGGTCCTGAGAGCTCTGCCCTTATGAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: ACLPKVMWAFKR*LGPESSALMNG Trigger: TCCATTCATAAGGGCAGAGCTCTCAGGACCCAACCACCTCTTAAAGGCCCACATGACCTTTGGGAGACACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | CACTTTTGGCCTCAAACTGAGGCAATGGGGACGAAGTaGCTGCGAGGCGCAGTATCTGGCATATGTGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HFWPQTEAMGTK*LRGAVSGICVR Trigger: TCTCACACATATGCCAGATACTGCGCCTCGCAGCCACTTCGTCCCCATTGCCTCAGTTTGAGGCCAAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 90 bp | GGGAAAAGCCTGCCTGACAGGAAGCAGCACAGAGCTGGACAGGCTTaGAACTCCTGGATCCCACTGTACCTGAAATTAGGCACCTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GKSLPDRKQHRAGQA*NSWIPLYLKLGTFN Trigger: GTTGAAGGTGCCTAATTTCAGGTACAGTGGGATCCAGGAGTTCAAAGCCTGTCCAGCTCTGTGCTGCTTCCTGTCAGGCAGGCTTTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | AGTGGATTTGTCATGAAAGTGAGTTCGGCCATTCCTTaGTGTCTCACGTGCCACCTCTTGCCATGGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGFVMKVSSAIP*CLTCHLLPWDA Trigger: GGCATCCCATGGCAAGAGGTGGCACGTGAGACAGCAAGGAATGGCCGAACTCACTTTCATGACAAATCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | CTGCCAGCACGCTGTCTCAGACTCTCCAGCATCTCCTaGTTGATGTGCATCATGGGGACCACACAAGATTAT | + |
|
Preference number: 6 (lower is better) Translates to: LPARCLRLSSIS*LMCIMGTTQDY Trigger: ATAATCTTGTGTGGTCCCCATGATGCACATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCGTGCTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | AGGTCATACAATGTGCAGAGACGAGCTAGAGTTTGCTaGGAGAAGGTGCGGGTGTGTGGACAAGTCAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: RSYNVQRRARVC*EKVRVCGQVSI Trigger: GATGCTGACTTGTCCACACACCCGCACCTTCTCCCAGCAAACTCTAGCTCGTCTCTGCACATTGTATGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 90 bp | AGAGTGCTGCCAGCACGCTGTCTCAGACTCTCCAGCATCTCCTGGTaGATGTGCATCATGGGGACCACACAAGATTATTTTATAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RVLPARCLRLSSISW*MCIMGTTQDYFIGC Trigger: GCAGCCTATAAAATAATCTTGTGTGGTCCCCATGATGCACATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCGTGCTGGCAGCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | GTACTCTTTAATGCCTGGTTCTTGGGCTTATTTTCCTaGGCAAGGCCCCCACGGGAGTGGAATTTCGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VLFNAWFLGLFS*ARPPREWNFGQ Trigger: TTGGCCGAAATTCCACTCCCGTGGGGGCCTTGCCAAGGAAAATAAGCCCAAGAACCAGGCATTAAAGAGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | ATTACCCAGGCTGTAGTACTCTTTAATGCCTGGTTCTaGGGCTTATTTTCCTTGGCAAGGCCCCCACGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ITQAVVLFNAWF*GLFSLARPPRE Trigger: CTCCCGTGGGGGCCTTGCCAAGGAAAATAAGCCCAAGAACCAGGCATTAAAGAGTACTACAGCCTGGGTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | TACTCTTTAATGCCTGGTTCTTGGGCTTATTTTCCTTaGCAAGGCCCCCACGGGAGTGGAATTTCGGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: YSLMPGSWAYFP*QGPHGSGISAK Trigger: TTTGGCCGAAATTCCACTCCCGTGGGGGCCTTGCCAAGGAAAATAAGCCCAAGAACCAGGCATTAAAGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | CCAGCACGCTGTCTCAGACTCTCCAGCATCTCCTGGTaGATGTGCATCATGGGGACCACACAAGATTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: PARCLRLSSISW*MCIMGTTQDYF Trigger: AAAATAATCTTGTGTGGTCCCCATGATGCACATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCGTGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | TGTCTCCCAAAGGTCATGTGGGCCTTTAAGAGGTGGTaGGGTCCTGAGAGCTCTGCCCTTATGAATGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: CLPKVMWAFKRW*GPESSALMNGL Trigger: TAATCCATTCATAAGGGCAGAGCTCTCAGGACCCAACCACCTCTTAAAGGCCCACATGACCTTTGGGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 90 bp | GTCTCAGCGTGTCTCCCAAAGGTCATGTGGGCCTTTAAGAGGTGGTaGGGTCCTGAGAGCTCTGCCCTTATGAATGGATTAGTATCATTA | + |
|
Preference number: 6 (lower is better) Translates to: VSACLPKVMWAFKRW*GPESSALMNGLVSL Trigger: TAATGATACTAATCCATTCATAAGGGCAGAGCTCTCAGGACCCAACCACCTCTTAAAGGCCCACATGACCTTTGGGAGACACGCTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS TCA 72 bp | CAGCACGCTGTCTCAGACTCTCCAGCATCTCCTGGTTaGTGTGCATCATGGGGACCACACAAGATTATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QHAVSDSPASPG*CASWGPHKIIL Trigger: TAAAATAATCTTGTGTGGTCCCCATGATGCACATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS GCA 72 bp | CGCTGTCTCAGACTCTCCAGCATCTCCTGGTTGATGTaGATCATGGGGACCACACAAGATTATTTTATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCLRLSSISWLM*IMGTTQDYFIG Trigger: GCCTATAAAATAATCTTGTGTGGTCCCCATGATGCACATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CCA 72 bp | CTGTCTTTCCCATTTTTGGCTGAAAACAGTTGGGACTaGCTTTCTGTCCCTTGCATACAGAAGGTGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: LSFPFLAENSWD*LSVPCIQKVLT Trigger: AGTCAGCACCTTCTGTATGCAAGGGACAGAAAGCCAGTCCCAACTGTTTTCAGCCAAAAATGGGAAAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||
| CDS CAA 72 bp | GCCTGCCCAATGAAACTTGATCTTGGGACTTCAGGGTaGGCCATGATTTGTGAAGGAGATGCCATTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ACPMKLDLGTSG*AMICEGDAIFH Trigger: ATGGAAAATGGCATCTCCTTCACAAATCATGGCCAACCCTGAAGTCCCAAGATCAAGTTTCATTGGGCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441214.1 |
||