Pregenerated sensors for LINC01269 (Homo sapiens)
Ensembl gene IDs: ENSG00000258689Ensembl transcript IDs: ENST00000553682.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCCCTTCCGTGCCATGGCAAGCTCAATCAAGGGCCACCATGGGGTaGCCAGGCTGTGGGAATGGCCAGATCCATGCGTGCTGCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: PPSVPWQAQSRATMG*PGCGNGQIHACCHQ Trigger: CTGATGGCAGCACGCATGGATCTGGCCATTCCCACAGCCTGGTCACCCCATGGTGGCCCTTGATTGAGCTTGCCATGGCACGGAAGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS GCA 90 bp | TTTCTCTCAATAAGGAGATCGGTGAGTAGGAGAGGCCCCCTTCCGTaGCATGGCAAGCTCAATCAAGGGCCACCATGGGGTGACCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: FLSIRRSVSRRGPLP*HGKLNQGPPWGDQA Trigger: AGCCTGGTCACCCCATGGTGGCCCTTGATTGAGCTTGCCATGGCACGGAAGGGGGCCTCTCCTACTCACCGATCTCCTTATTGAGAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS GCA 90 bp | GGCTTGAGACTTTGGGAGCCACTCAAGCTTCAGAGGGCAGGATCCTaGCTTGGAGATGATGTACCAACACAGCTACCTCCCCACCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GLRLWEPLKLQRAGS*LGDDVPTQLPPHQF Trigger: GAACTGGTGGGGAGGTAGCTGTGTTGGTACATCATCTCCAAGGCAGGATCCTGCCCTCTGAAGCTTGAGTGGCTCCCAAAGTCTCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS GCA 72 bp | CATGGGGTGACCAGGCTGTGGGAATGGCCAGATCCATaGGTGCTGCCATCAGCATGGCCAGGTGAACGTTGG | + |
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Preference number: 6 (lower is better) Translates to: HGVTRLWEWPDP*VLPSAWPGERW Trigger: CCAACGTTCACCTGGCCATGCTGATGGCAGCACGCATGGATCTGGCCATTCCCACAGCCTGGTCACCCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS CCA 72 bp | CTTCCGTGCCATGGCAAGCTCAATCAAGGGCCACCATaGGGTGACCAGGCTGTGGGAATGGCCAGATCCATG | + |
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Preference number: 6 (lower is better) Translates to: LPCHGKLNQGPP*GDQAVGMARSM Trigger: CATGGATCTGGCCATTCCCACAGCCTGGTCACCCCATGGTGGCCCTTGATTGAGCTTGCCATGGCACGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS GCA 72 bp | ATAAGGAGATCGGTGAGTAGGAGAGGCCCCCTTCCGTaGCATGGCAAGCTCAATCAAGGGCCACCATGGGGT | + |
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Preference number: 6 (lower is better) Translates to: IRRSVSRRGPLP*HGKLNQGPPWG Trigger: ACCCCATGGTGGCCCTTGATTGAGCTTGCCATGGCACGGAAGGGGGCCTCTCCTACTCACCGATCTCCTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS CAA 72 bp | GGGAGCCACTCAAGCTTCAGAGGGCAGGATCCTGCCTaGGAGATGATGTACCAACACAGCTACCTCCCCACC | + |
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Preference number: 6 (lower is better) Translates to: GSHSSFRGQDPA*EMMYQHSYLPT Trigger: GGTGGGGAGGTAGCTGTGTTGGTACATCATCTCCAAGGCAGGATCCTGCCCTCTGAAGCTTGAGTGGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS GCA 72 bp | CTTTGGGAGCCACTCAAGCTTCAGAGGGCAGGATCCTaGCTTGGAGATGATGTACCAACACAGCTACCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LWEPLKLQRAGS*LGDDVPTQLPP Trigger: GGGAGGTAGCTGTGTTGGTACATCATCTCCAAGGCAGGATCCTGCCCTCTGAAGCTTGAGTGGCTCCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS CAA 72 bp | AAGGCTGAGCCAAATGCTCAAATCAGCACAGTGGGCTaGAGACTTTGGGAGCCACTCAAGCTTCAGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: KAEPNAQISTVG*RLWEPLKLQRA Trigger: TGCCCTCTGAAGCTTGAGTGGCTCCCAAAGTCTCAAGCCCACTGTGCTGATTTGAGCATTTGGCTCAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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| CDS TCA 72 bp | CTACCTCCCCACCAGTTCATTAGGAAGACAAATGCCTaGGCCAAATTCCTTAGGATTTGCCAAGAACCAATT | + |
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Preference number: 6 (lower is better) Translates to: LPPHQFIRKTNA*AKFLRICQEPI Trigger: AATTGGTTCTTGGCAAATCCTAAGGAATTTGGCTCAGGCATTTGTCTTCCTAATGAACTGGTGGGGAGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553682.1 |
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