Pregenerated sensors for LINC01260 (Homo sapiens)
Ensembl gene IDs: ENSG00000283440Ensembl transcript IDs: ENST00000255183.8
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGCTGTCTCCAGGGCCAGAGATCTTCCTCTCATCCCGCACTATCTaGAGTCCTCTCTGGTGTGTGTGGGGCGCAGTCATTAGACCCATC | + |
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Preference number: 5 (lower is better) Translates to: MLSPGPEIFLSSRTI*SPLWCVWGAVIRPI Trigger: GATGGGTCTAATGACTGCGCCCCACACACACCAGAGAGGACTGCAGATAGTGCGGGATGAGAGGAAGATCTCTGGCCCTGGAGACAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 90 bp | GGGCCAGAGATCTTCCTCTCATCCCGCACTATCTGCAGTCCTCTCTaGTGTGTGTGGGGCGCAGTCATTAGACCCATCTTCCAGGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: GPEIFLSSRTICSPL*CVWGAVIRPIFQVR Trigger: TCTCACCTGGAAGATGGGTCTAATGACTGCGCCCCACACACACCAGAGAGGACTGCAGATAGTGCGGGATGAGAGGAAGATCTCTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 90 bp | ATCTTCCTCTCATCCCGCACTATCTGCAGTCCTCTCTGGTGTGTGTaGGGCGCAGTCATTAGACCCATCTTCCAGGTGAGAGATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: IFLSSRTICSPLWCV*GAVIRPIFQVRDLC Trigger: GCAGAGATCTCTCACCTGGAAGATGGGTCTAATGACTGCGCCCCACACACACCAGAGAGGACTGCAGATAGTGCGGGATGAGAGGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS GCA 90 bp | AGTGGACCAGTGACTACAGAAAGCTTGAGAGGGGCTGGAGAGAGATaGCTTCCCCAATATTCATTATCCACACAGCACGCCACTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SGPVTTESLRGAGER*LPQYSLSTQHATPR Trigger: CCTTGGAGTGGCGTGCTGTGTGGATAATGAATATTGGGGAAGGCATCTCTCTCCAGCCCCTCTCAAGCTTTCTGTAGTCACTGGTCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 90 bp | ATTGGCTCATGGTTCTGGAGGCTGGAAAGTCCAATATCAAGGTGCTaGCATCATTCAAGGGCCTTCTTGCATCTGCCTTCCAGCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: IGSWFWRLESPISRC*HHSRAFLHLPSSFR Trigger: CCGGAAGCTGGAAGGCAGATGCAAGAAGGCCCTTGAATGATGCCAGCACCTTGATATTGGACTTTCCAGCCTCCAGAACCATGAGCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS TCA 90 bp | CACAGCACGCCACTCCAAGGACCTGTTGCATGCCAGGCCCAGCACTaGGTCTTGTGCCAACATTGTTTTAGTCCATTTTGTGCTGCTATA | + |
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Preference number: 5 (lower is better) Translates to: HSTPLQGPVACQAQH*VLCQHCFSPFCAAI Trigger: TATAGCAGCACAAAATGGACTAAAACAATGTTGGCACAAGACTCAGTGCTGGGCCTGGCATGCAACAGGTCCTTGGAGTGGCGTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 90 bp | AGCAATACAGAGTGGACCAGTGACTACAGAAAGCTTGAGAGGGGCTaGAGAGAGATGCCTTCCCCAATATTCATTATCCACACAGCACGC | + |
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Preference number: 5 (lower is better) Translates to: SNTEWTSDYRKLERG*REMPSPIFIIHTAR Trigger: GCGTGCTGTGTGGATAATGAATATTGGGGAAGGCATCTCTCTCCAGCCCCTCTCAAGCTTTCTGTAGTCACTGGTCCACTCTGTATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 90 bp | ATCATTCAAGGGCCTTCTTGCATCTGCCTTCCAGCTTCCGGAATTTaGTTGATTCTTCTCATCTGCTATTTTCTTCCTCATACGTTTTCG | + |
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Preference number: 5 (lower is better) Translates to: IIQGPSCICLPASGI*LILLICYFLPHTFS Trigger: CGAAAACGTATGAGGAAGAAAATAGCAGATGAGAAGAATCAACCAAATTCCGGAAGCTGGAAGGCAGATGCAAGAAGGCCCTTGAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 90 bp | ACCTGGAACTGGGTAATTTTTATGGAACAGAAATGTATTGGCTCATaGTTCTGGAGGCTGGAAAGTCCAATATCAAGGTGCTGGCATCAT | + |
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Preference number: 5 (lower is better) Translates to: TWNWVIFMEQKCIGS*FWRLESPISRCWHH Trigger: ATGATGCCAGCACCTTGATATTGGACTTTCCAGCCTCCAGAACCATGAGCCAATACATTTCTGTTCCATAAAAATTACCCAGTTCCAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS GCA 72 bp | CCAGGGCCAGAGATCTTCCTCTCATCCCGCACTATCTaGAGTCCTCTCTGGTGTGTGTGGGGCGCAGTCATT | + |
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Preference number: 6 (lower is better) Translates to: PGPEIFLSSRTI*SPLWCVWGAVI Trigger: AATGACTGCGCCCCACACACACCAGAGAGGACTGCAGATAGTGCGGGATGAGAGGAAGATCTCTGGCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 72 bp | TCATCCCGCACTATCTGCAGTCCTCTCTGGTGTGTGTaGGGCGCAGTCATTAGACCCATCTTCCAGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SSRTICSPLWCV*GAVIRPIFQVR Trigger: TCTCACCTGGAAGATGGGTCTAATGACTGCGCCCCACACACACCAGAGAGGACTGCAGATAGTGCGGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 72 bp | TTCATTATCCACACAGCACGCCACTCCAAGGACCTGTaGCATGCCAGGCCCAGCACTGAGTCTTGTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FIIHTARHSKDL*HARPSTESCAN Trigger: GTTGGCACAAGACTCAGTGCTGGGCCTGGCATGCAACAGGTCCTTGGAGTGGCGTGCTGTGTGGATAATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 72 bp | ATCTTCCTCTCATCCCGCACTATCTGCAGTCCTCTCTaGTGTGTGTGGGGCGCAGTCATTAGACCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: IFLSSRTICSPL*CVWGAVIRPIF Trigger: GAAGATGGGTCTAATGACTGCGCCCCACACACACCAGAGAGGACTGCAGATAGTGCGGGATGAGAGGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS TCA 72 bp | TTGAGTGTGGCACCTGGTTCCTGCCAGGACCCCGAGTaGTACAGGCTGGTCTTGAGCTTCTTCATAGCAATA | + |
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Preference number: 6 (lower is better) Translates to: LSVAPGSCQDPE*YRLVLSFFIAI Trigger: TATTGCTATGAAGAAGCTCAAGACCAGCCTGTATCACTCGGGGTCCTGGCAGGAACCAGGTGCCACACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS GCA 72 bp | GTGACTACAGAAAGCTTGAGAGGGGCTGGAGAGAGATaGCTTCCCCAATATTCATTATCCACACAGCACGCC | + |
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Preference number: 6 (lower is better) Translates to: VTTESLRGAGER*LPQYSLSTQHA Trigger: GGCGTGCTGTGTGGATAATGAATATTGGGGAAGGCATCTCTCTCCAGCCCCTCTCAAGCTTTCTGTAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 72 bp | CAGGCTGGTCTTGAGCTTCTTCATAGCAATACAGAGTaGACCAGTGACTACAGAAAGCTTGAGAGGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QAGLELLHSNTE*TSDYRKLERGW Trigger: CCAGCCCCTCTCAAGCTTTCTGTAGTCACTGGTCCACTCTGTATTGCTATGAAGAAGCTCAAGACCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS GCA 72 bp | CAAGGTGCTGGCATCATTCAAGGGCCTTCTTGCATCTaGCTTCCAGCTTCCGGAATTTGGTTGATTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QGAGIIQGPSCI*LPASGIWLILL Trigger: GAGAAGAATCAACCAAATTCCGGAAGCTGGAAGGCAGATGCAAGAAGGCCCTTGAATGATGCCAGCACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS GCA 72 bp | TCATGGTTCTGGAGGCTGGAAAGTCCAATATCAAGGTaGTGGCATCATTCAAGGGCCTTCTTGCATCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SWFWRLESPISR*WHHSRAFLHLP Trigger: AGGCAGATGCAAGAAGGCCCTTGAATGATGCCAGCACCTTGATATTGGACTTTCCAGCCTCCAGAACCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 72 bp | ATAACTCCCATATTAAACCCTCTTCAATTACTCAGTTaGAGTGTGGCACCTGGTTCCTGCCAGGACCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: ITPILNPLQLLS*SVAPGSCQDPE Trigger: CTCGGGGTCCTGGCAGGAACCAGGTGCCACACTCAAACTGAGTAATTGAAGAGGGTTTAATATGGGAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 90 bp | CTGGAAAGTCCAATATCAAGGTGCTGGCATCATTCAAGGGCCTTCTaGCATCTGCCTTCCAGCTTCCGGAATTTGGTTGATTCTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LESPISRCWHHSRAF*HLPSSFRNLVDSSH Trigger: ATGAGAAGAATCAACCAAATTCCGGAAGCTGGAAGGCAGATGCAAGAAGGCCCTTGAATGATGCCAGCACCTTGATATTGGACTTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 90 bp | AGCTTCTTCATAGCAATACAGAGTGGACCAGTGACTACAGAAAGCTaGAGAGGGGCTGGAGAGAGATGCCTTCCCCAATATTCATTATCC | + |
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Preference number: 6 (lower is better) Translates to: SFFIAIQSGPVTTES*RGAGERCLPQYSLS Trigger: GGATAATGAATATTGGGGAAGGCATCTCTCTCCAGCCCCTCTCAAGCTTTCTGTAGTCACTGGTCCACTCTGTATTGCTATGAAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS GCA 72 bp | CAATATCAAGGTGCTGGCATCATTCAAGGGCCTTCTTaGATCTGCCTTCCAGCTTCCGGAATTTGGTTGATT | + |
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Preference number: 6 (lower is better) Translates to: QYQGAGIIQGPS*ICLPASGIWLI Trigger: AATCAACCAAATTCCGGAAGCTGGAAGGCAGATGCAAGAAGGCCCTTGAATGATGCCAGCACCTTGATATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 72 bp | TTCTCATCTGCTATTTTCTTCCTCATACGTTTTCGCTaGATGATGCTGTCTCCAGGGCCAGAGATCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSSAIFFLIRFR*MMLSPGPEIFL Trigger: GAGGAAGATCTCTGGCCCTGGAGACAGCATCATCAAGCGAAAACGTATGAGGAAGAAAATAGCAGATGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CCA 72 bp | TGGAACAGAAATGTATTGGCTCATGGTTCTGGAGGCTaGAAAGTCCAATATCAAGGTGCTGGCATCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: WNRNVLAHGSGG*KVQYQGAGIIQ Trigger: TTGAATGATGCCAGCACCTTGATATTGGACTTTCCAGCCTCCAGAACCATGAGCCAATACATTTCTGTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 72 bp | CCTTCTTGCATCTGCCTTCCAGCTTCCGGAATTTGGTaGATTCTTCTCATCTGCTATTTTCTTCCTCATACG | + |
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Preference number: 6 (lower is better) Translates to: PSCICLPASGIW*ILLICYFLPHT Trigger: CGTATGAGGAAGAAAATAGCAGATGAGAAGAATCAACCAAATTCCGGAAGCTGGAAGGCAGATGCAAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 90 bp | ATTCAAGGGCCTTCTTGCATCTGCCTTCCAGCTTCCGGAATTTGGTaGATTCTTCTCATCTGCTATTTTCTTCCTCATACGTTTTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: IQGPSCICLPASGIW*ILLICYFLPHTFSL Trigger: AAGCGAAAACGTATGAGGAAGAAAATAGCAGATGAGAAGAATCAACCAAATTCCGGAAGCTGGAAGGCAGATGCAAGAAGGCCCTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS CAA 90 bp | CATCATTCAAGGGCCTTCTTGCATCTGCCTTCCAGCTTCCGGAATTaGGTTGATTCTTCTCATCTGCTATTTTCTTCCTCATACGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: HHSRAFLHLPSSFRN*VDSSHLLFSSSYVF Trigger: GAAAACGTATGAGGAAGAAAATAGCAGATGAGAAGAATCAACCAAATTCCGGAAGCTGGAAGGCAGATGCAAGAAGGCCCTTGAATGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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| CDS TCA 72 bp | CTTCCTGGCACTCTTAGTTTGTTCAACATGACCGGCTaGGTTTCTTGCATGGCTAGAAAATATTTGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LPGTLSLFNMTG*VSCMARKYLQQ Trigger: TTGCTGCAAATATTTTCTAGCCATGCAAGAAACTCAGCCGGTCATGTTGAACAAACTAAGAGTGCCAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255183.8 |
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