Pregenerated sensors for LINC01258 (Homo sapiens)
Ensembl gene IDs: ENSG00000249534Ensembl transcript IDs: ENST00000512517.1, ENST00000653888.1, ENST00000669996.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACATCCAAGTTCCAGCCTACCCAGCTGGGACAGTCAGAGGCTGTTTaGTCCCCAGTCCCAAGGCGAACAGAGGCTCCTTGTCTGGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: TSKFQPTQLGQSEAV*SPVPRRTEAPCLEG Trigger: TCCTTCCAGACAAGGAGCCTCTGTTCGCCTTGGGACTGGGGAGCAAACAGCCTCTGACTGTCCCAGCTGGGTAGGCTGGAACTTGGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669996.1 |
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| CDS GCA 90 bp | CAGAGCTTTAAAAGCAAGCAGCACATCTGCTGCAACATCCTCTCATaGCTGCATCAGAGCCTGGAGCCCACCTTGACTGGCGCCCACACC | + |
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Preference number: 5 (lower is better) Translates to: QSFKSKQHICCNILS*LHQSLEPTLTGAHT Trigger: GGTGTGGGCGCCAGTCAAGGTGGGCTCCAGGCTCTGATGCAGGCATGAGAGGATGTTGCAGCAGATGTGCTGCTTGCTTTTAAAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS GCA 90 bp | GTTGTCTGTATGGTGACATCTGGTCTGCCAATGCAGACCTGCCAATaGACATCCAAGTTCCAGCCTACCCAGCTGGGACAGTCAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: VVCMVTSGLPMQTCQ*TSKFQPTQLGQSEA Trigger: AGCCTCTGACTGTCCCAGCTGGGTAGGCTGGAACTTGGATGTGCATTGGCAGGTCTGCATTGGCAGACCAGATGTCACCATACAGACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669996.1 |
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| CDS TCA 90 bp | GCCAATGCAGACCTGCCAATGCACATCCAAGTTCCAGCCTACCCATaGGCACATGAAATTCTGAAGCGTAACCCATCAGGCTTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: ANADLPMHIQVPAYP*AHEILKRNPSGFSS Trigger: TGAGGAGAAGCCTGATGGGTTACGCTTCAGAATTTCATGTGCTCATGGGTAGGCTGGAACTTGGATGTGCATTGGCAGGTCTGCATTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS GCA 90 bp | CTCATCTTTGTTGTGTTCCAGAGCTTTAAAAGCAAGCAGCACATCTaGTGCAACATCCTCTCATGCCTGCATCAGAGCCTGGAGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: LIFVVFQSFKSKQHI*CNILSCLHQSLEPT Trigger: GGTGGGCTCCAGGCTCTGATGCAGGCATGAGAGGATGTTGCAGCAGATGTGCTGCTTGCTTTTAAAGCTCTGGAACACAACAAAGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS GCA 90 bp | GATATTGTTGTCTGTATGGTGACATCTGGTCTGCCAATGCAGACCTaGCAATGCACATCCAAGTTCCAGCCTACCCAGCTGGGACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: DIVVCMVTSGLPMQT*QCTSKFQPTQLGQS Trigger: TGACTGTCCCAGCTGGGTAGGCTGGAACTTGGATGTGCATTGGCAGGTCTGCATTGGCAGACCAGATGTCACCATACAGACAACAATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669996.1 |
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| CDS CCA 90 bp | AGTCATCCCCTGTGTCAATATCCAGCAGCAGAAGAAGAAAGAATATaGGAGGTTTCTATGGGCCGGTCTGGGAGTGGCTGGCATCATTTT | + |
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Preference number: 5 (lower is better) Translates to: SHPLCQYPAAEEERI*EVSMGRSGSGWHHF Trigger: AAAATGATGCCAGCCACTCCCAGACCGGCCCATAGAAACCTCCCATATTCTTTCTTCTTCTGCTGCTGGATATTGACACAGGGGATGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS GCA 90 bp | GATATTGTTGTCTGTATGGTGACATCTGGTCTGCCAATGCAGACCTaGCAATGCACATCCAAGTTCCAGCCTACCAGATCAATCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: DIVVCMVTSGLPMQT*QCTSKFQPTRSIQH Trigger: ATGCTGGATTGATCTGGTAGGCTGGAACTTGGATGTGCATTGGCAGGTCTGCATTGGCAGACCAGATGTCACCATACAGACAACAATATC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS GCA 90 bp | GATATTGTTGTCTGTATGGTGACATCTGGTCTGCCAATGCAGACCTaGCAATGCACATCCAAGTTCCAGCCTACCCATGAGCACATGAAA | + |
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Preference number: 5 (lower is better) Translates to: DIVVCMVTSGLPMQT*QCTSKFQPTHEHMK Trigger: TTTCATGTGCTCATGGGTAGGCTGGAACTTGGATGTGCATTGGCAGGTCTGCATTGGCAGACCAGATGTCACCATACAGACAACAATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CCA 90 bp | GTCAATATCCAGCAGCAGAAGAAGAAAGAATATGGGAGGTTTCTATaGGCCGGTCTGGGAGTGGCTGGCATCATTTTTGCTCACATTTCA | + |
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Preference number: 5 (lower is better) Translates to: VNIQQQKKKEYGRFL*AGLGVAGIIFAHIS Trigger: TGAAATGTGAGCAAAAATGATGCCAGCCACTCCCAGACCGGCCCATAGAAACCTCCCATATTCTTTCTTCTTCTGCTGCTGGATATTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 90 bp | AGATTACCACGGGATCTGCTCAACATGTTGTTCAGGGACCAAGGCTaGAAGACAGCTTCTGCCATCTTCAATACTCAGCTTTCAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: RLPRDLLNMLFRDQG*KTASAIFNTQLSKS Trigger: TGACTTTGAAAGCTGAGTATTGAAGATGGCAGAAGCTGTCTTTCAGCCTTGGTCCCTGAACAACATGTTGAGCAGATCCCGTGGTAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS GCA 90 bp | TTATCCAGGCTCTGTGAAAAATATCTCCATGAGCAGGGAACTCAGTaGCTCCAATGTCTATGCAGACCTGACAGCCAGAAATCTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LSRLCEKYLHEQGTQ*LQCLCRPDSQKSFS Trigger: AGAGAAAGATTTCTGGCTGTCAGGTCTGCATAGACATTGGAGGCACTGAGTTCCCTGCTCATGGAGATATTTTTCACAGAGCCTGGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 90 bp | ATGCACATCCAAGTTCCAGCCTACCAGATCAATCCAGCATCCGGTTaGCTGACAGAAAGTCAACTGCATGGATGTTCTAATACAAATCAC | + |
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Preference number: 5 (lower is better) Translates to: MHIQVPAYQINPASG*LTESQLHGCSNTNH Trigger: GTGATTTGTATTAGAACATCCATGCAGTTGACTTTCTGTCAGTCAACCGGATGCTGGATTGATCTGGTAGGCTGGAACTTGGATGTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS TCA 90 bp | ACATCCAAGTTCCAGCCTACCAGATCAATCCAGCATCCGGTTGACTaGCAGAAAGTCAACTGCATGGATGTTCTAATACAAATCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: TSKFQPTRSIQHPVD*QKVNCMDVLIQITF Trigger: GAAAGTGATTTGTATTAGAACATCCATGCAGTTGACTTTCTGTCAGTCAACCGGATGCTGGATTGATCTGGTAGGCTGGAACTTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS GCA 90 bp | GAAAAATATCTCCATGAGCAGGGAACTCAGTGCCTCCAATGTCTATaGAGACCTGACAGCCAGAAATCTTTCTCTTCAGCAAAATCAGTT | + |
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Preference number: 5 (lower is better) Translates to: EKYLHEQGTQCLQCL*RPDSQKSFSSAKSV Trigger: AACTGATTTTGCTGAAGAGAAAGATTTCTGGCTGTCAGGTCTGCATAGACATTGGAGGCACTGAGTTCCCTGCTCATGGAGATATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 90 bp | GCACTCCTACTTACTCTAAATCTGCTCTTCCAGTTTCTTCAACTTTaGATTTCTCACCAATCATGTTGCTGTTATCTGAACACTTCTACT | + |
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Preference number: 5 (lower is better) Translates to: ALLLTLNLLFQFLQL*ISHQSCCCYLNTST Trigger: AGTAGAAGTGTTCAGATAACAGCAACATGATTGGTGAGAAATTCAAAGTTGAAGAAACTGGAAGAGCAGATTTAGAGTAAGTAGGAGTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 90 bp | CTGACAGCCAGAAATCTTTCTCTTCAGCAAAATCAGTTTTCCCGTTaGACCATACTTCTATCTACTGAAACTACACAGAACAAAGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: LTARNLSLQQNQFSR*TILLSTETTQNKVN Trigger: ATTCACTTTGTTCTGTGTAGTTTCAGTAGATAGAAGTATGGTTCAACGGGAAAACTGATTTTGCTGAAGAGAAAGATTTCTGGCTGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CCA 90 bp | TCATGTAACAGTTCAACGATAGGCAGGTTGTCCAGGACAAATGTGTaGTTTATTCAAACACCAAAGTTTCTTTTACTTTCAAGCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SCNSSTIGRLSRTNV*FIQTPKFLLLSSFS Trigger: AGAAAAGCTTGAAAGTAAAAGAAACTTTGGTGTTTGAATAAACCACACATTTGTCCTGGACAACCTGCCTATCGTTGAACTGTTACATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS GCA 90 bp | TTTGCTCACATTTCACTTCAAGGGAAGCTAGAAAATGCATTTTCATaGTGTATGATACACAGTTGTTACAAATCCAGCCAAATGATTATC | + |
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Preference number: 5 (lower is better) Translates to: FAHISLQGKLENAFS*CMIHSCYKSSQMII Trigger: GATAATCATTTGGCTGGATTTGTAACAACTGTGTATCATACAGCATGAAAATGCATTTTCTAGCTTCCCTTGAAGTGAAATGTGAGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CCA 72 bp | CTCATGCCTGCATCAGAGCCTGGAGCCCACCTTGACTaGCGCCCACACCTGGCAGGAAAGGTGAAGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LMPASEPGAHLD*RPHLAGKVKVL Trigger: CAGGACCTTCACCTTTCCTGCCAGGTGTGGGCGCCAGTCAAGGTGGGCTCCAGGCTCTGATGCAGGCATGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CAA 72 bp | GTTCCAGCCTACCCAGCTGGGACAGTCAGAGGCTGTTaGCTCCCCAGTCCCAAGGCGAACAGAGGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: VPAYPAGTVRGC*LPSPKANRGSL Trigger: CAAGGAGCCTCTGTTCGCCTTGGGACTGGGGAGCAAACAGCCTCTGACTGTCCCAGCTGGGTAGGCTGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669996.1 |
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| CDS GCA 72 bp | TTCCAGCCTACCCAGCTGGGACAGTCAGAGGCTGTTTaGTCCCCAGTCCCAAGGCGAACAGAGGCTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: FQPTQLGQSEAV*SPVPRRTEAPC Trigger: ACAAGGAGCCTCTGTTCGCCTTGGGACTGGGGAGCAAACAGCCTCTGACTGTCCCAGCTGGGTAGGCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669996.1 |
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| CDS CAA 90 bp | CACATCCAAGTTCCAGCCTACCCAGCTGGGACAGTCAGAGGCTGTTaGCTCCCCAGTCCCAAGGCGAACAGAGGCTCCTTGTCTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: HIQVPAYPAGTVRGC*LPSPKANRGSLSGR Trigger: CCTTCCAGACAAGGAGCCTCTGTTCGCCTTGGGACTGGGGAGCAAACAGCCTCTGACTGTCCCAGCTGGGTAGGCTGGAACTTGGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669996.1 |
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| CDS GCA 72 bp | AAAAGCAAGCAGCACATCTGCTGCAACATCCTCTCATaGCTGCATCAGAGCCTGGAGCCCACCTTGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: KSKQHICCNILS*LHQSLEPTLTG Trigger: GCCAGTCAAGGTGGGCTCCAGGCTCTGATGCAGGCATGAGAGGATGTTGCAGCAGATGTGCTGCTTGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CCA 72 bp | AGCAAGGAAAGAATCACGCCTGAGTTTGCCAGAGAGTaGTCAGGAGTTTCTGGCTCCAAGGCAGACACCAAG | + |
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Preference number: 6 (lower is better) Translates to: SKERITPEFARE*SGVSGSKADTK Trigger: CTTGGTGTCTGCCTTGGAGCCAGAAACTCCTGACCACTCTCTGGCAAACTCAGGCGTGATTCTTTCCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS GCA 72 bp | ACACAGTCCAGGGCAGTTCCAGATTACCACGGGATCTaGTCAACATGTTGTTCAGGGACCAAGGCTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: TQSRAVPDYHGI*STCCSGTKAER Trigger: TCTTTCAGCCTTGGTCCCTGAACAACATGTTGAGCAGATCCCGTGGTAATCTGGAACTGCCCTGGACTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512517.1 ENST00000669996.1 |
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| CDS GCA 72 bp | CTACAGTCCAGGGCAGTTCCAGATTACCACGGGATCTaGTCAACATGTTGTTCAGGGACCAAGGCTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LQSRAVPDYHGI*STCCSGTKAER Trigger: TCTTTCAGCCTTGGTCCCTGAACAACATGTTGAGCAGATCCCGTGGTAATCTGGAACTGCCCTGGACTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CCA 72 bp | AGACTGGGGGTTGTAAACTCAAATGCTGAAAGTGGCTaGATGAGTGAGCGGAGAGGGCTGTGTGGAGACTAT | + |
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Preference number: 6 (lower is better) Translates to: RLGVVNSNAESG*MSERRGLCGDY Trigger: ATAGTCTCCACACAGCCCTCTCCGCTCACTCATCCAGCCACTTTCAGCATTTGAGTTTACAACCCCCAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS GCA 72 bp | CTCCATGAGCAGGGAACTCAGTGCCTCCAATGTCTATaGAGACCTGACAGCCAGAAATCTTTCTCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LHEQGTQCLQCL*RPDSQKSFSSA Trigger: TGCTGAAGAGAAAGATTTCTGGCTGTCAGGTCTGCATAGACATTGGAGGCACTGAGTTCCCTGCTCATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 72 bp | CGGGATCTGCTCAACATGTTGTTCAGGGACCAAGGCTaGAAGACAGCTTCTGCCATCTTCAATACTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RDLLNMLFRDQG*KTASAIFNTQL Trigger: AAGCTGAGTATTGAAGATGGCAGAAGCTGTCTTTCAGCCTTGGTCCCTGAACAACATGTTGAGCAGATCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 72 bp | CAGTTCTCCTTGAATGAGGCTGTGTTGGGTGTCCACTaGTGCCCAAGAACAGAAGGAATCAGTCATTCCATC | + |
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Preference number: 6 (lower is better) Translates to: QFSLNEAVLGVH*CPRTEGISHSI Trigger: GATGGAATGACTGATTCCTTCTGTTCTTGGGCATCAGTGGACACCCAACACAGCCTCATTCAAGGAGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS CCA 72 bp | ATATGGGAGGTTTCTATGGGCCGGTCTGGGAGTGGCTaGCATCATTTTTGCTCACATTTCACTTCAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: IWEVSMGRSGSG*HHFCSHFTSRE Trigger: TTCCCTTGAAGTGAAATGTGAGCAAAAATGATGCCAGCCACTCCCAGACCGGCCCATAGAAACCTCCCATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 72 bp | GCAGGGAACTCAGTGCCTCCAATGTCTATGCAGACCTaGCAGCCAGAAATCTTTCTCTTCAGCAAAATCAGT | + |
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Preference number: 6 (lower is better) Translates to: AGNSVPPMSMQT*QPEIFLFSKIS Trigger: ACTGATTTTGCTGAAGAGAAAGATTTCTGGCTGTCAGGTCTGCATAGACATTGGAGGCACTGAGTTCCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CCA 72 bp | AAGAATATGGGAGGTTTCTATGGGCCGGTCTGGGAGTaGCTGGCATCATTTTTGCTCACATTTCACTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: KNMGGFYGPVWE*LASFLLTFHFK Trigger: CTTGAAGTGAAATGTGAGCAAAAATGATGCCAGCCACTCCCAGACCGGCCCATAGAAACCTCCCATATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CCA 72 bp | AGAAGAAAGAATATGGGAGGTTTCTATGGGCCGGTCTaGGAGTGGCTGGCATCATTTTTGCTCACATTTCAC | + |
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Preference number: 6 (lower is better) Translates to: RRKNMGGFYGPV*EWLASFLLTFH Trigger: GTGAAATGTGAGCAAAAATGATGCCAGCCACTCCCAGACCGGCCCATAGAAACCTCCCATATTCTTTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS TCA 72 bp | CAAGTTCCAGCCTACCAGATCAATCCAGCATCCGGTTaGCTGACAGAAAGTCAACTGCATGGATGTTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: QVPAYQINPASG*LTESQLHGCSN Trigger: ATTAGAACATCCATGCAGTTGACTTTCTGTCAGTCAACCGGATGCTGGATTGATCTGGTAGGCTGGAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS CAA 72 bp | GTGGAGACTATGAGTAAACACAGAGCATATGACCCTTaGAAAGGGCACAACAACTGTTCAGCTCCAATCAGT | + |
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Preference number: 6 (lower is better) Translates to: VETMSKHRAYDP*KGHNNCSAPIS Trigger: ACTGATTGGAGCTGAACAGTTGTTGTGCCCTTTCAAAGGGTCATATGCTCTGTGTTTACTCATAGTCTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS CAA 72 bp | GTGAATCATTCTTTCACAGGCCAGTTCCTCAGACATTaGAAAGTGGCACTCCTACTTACTCTAAATCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VNHSFTGQFLRH*KVALLLTLNLL Trigger: GAGCAGATTTAGAGTAAGTAGGAGTGCCACTTTCAAATGTCTGAGGAACTGGCCTGTGAAAGAATGATTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CAA 90 bp | TGGACCTTTTATCACAGGACTCCATATTGTAGAACTTCTCTGCCATaGTTGTATAAAGAAGTTGATTCCTACAGTCCAGGGCAGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: WTFYHRTPYCRTSLP*LYKEVDSYSPGQFQ Trigger: CTGGAACTGCCCTGGACTGTAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAATATGGAGTCCTGTGATAAAAGGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CAA 90 bp | CAGAACAAAGTGAATCATTCTTTCACAGGCCAGTTCCTCAGACATTaGAAAGTGGCACTCCTACTTACTCTAAATCTGCTCTTCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: QNKVNHSFTGQFLRH*KVALLLTLNLLFQF Trigger: AAACTGGAAGAGCAGATTTAGAGTAAGTAGGAGTGCCACTTTCAAATGTCTGAGGAACTGGCCTGTGAAAGAATGATTCACTTTGTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CAA 90 bp | TGGACCTTTTATCACAGGACTCCATATTGTAGAACTTCTCTGCCATaGTTGTATAAAGAAGTTGATTCCTTTACACAGTCCAGGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: WTFYHRTPYCRTSLP*LYKEVDSFTQSRAV Trigger: AACTGCCCTGGACTGTGTAAAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAATATGGAGTCCTGTGATAAAAGGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS CAA 72 bp | CTTTTTCTCTCATGTAACAGTTCAACGATAGGCAGGTaGTCCAGGACAAATGTGTGGTTTATTCAAACACCA | + |
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Preference number: 6 (lower is better) Translates to: LFLSCNSSTIGR*SRTNVWFIQTP Trigger: TGGTGTTTGAATAAACCACACATTTGTCCTGGACAACCTGCCTATCGTTGAACTGTTACATGAGAGAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CAA 72 bp | CACCAATCATGTTGCTGTTATCTGAACACTTCTACTTaGTCTTTAGGCCCCTTGAAATGTGATTCACAGATG | + |
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Preference number: 6 (lower is better) Translates to: HQSCCCYLNTST*SLGPLKCDSQM Trigger: CATCTGTGAATCACATTTCAAGGGGCCTAAAGACAAAGTAGAAGTGTTCAGATAACAGCAACATGATTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CAA 72 bp | ATTGTAGAACTTCTCTGCCATTGTTGTATAAAGAAGTaGATTCCTACAGTCCAGGGCAGTTCCAGATTACCA | + |
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Preference number: 6 (lower is better) Translates to: IVELLCHCCIKK*IPTVQGSSRLP Trigger: TGGTAATCTGGAACTGCCCTGGACTGTAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CAA 72 bp | TATCACAGGACTCCATATTGTAGAACTTCTCTGCCATaGTTGTATAAAGAAGTTGATTCCTACAGTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: YHRTPYCRTSLP*LYKEVDSYSPG Trigger: CCCTGGACTGTAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAATATGGAGTCCTGTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CAA 90 bp | TCTGCTCTTCCAGTTTCTTCAACTTTGAATTTCTCACCAATCATGTaGCTGTTATCTGAACACTTCTACTTTGTCTTTAGGCCCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SALPVSSTLNFSPIM*LLSEHFYFVFRPLE Trigger: TTCAAGGGGCCTAAAGACAAAGTAGAAGTGTTCAGATAACAGCAACATGATTGGTGAGAAATTCAAAGTTGAAGAAACTGGAAGAGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CAA 90 bp | GGCACTCCTACTTACTCTAAATCTGCTCTTCCAGTTTCTTCAACTTaGAATTTCTCACCAATCATGTTGCTGTTATCTGAACACTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: GTPTYSKSALPVSST*NFSPIMLLLSEHFY Trigger: GTAGAAGTGTTCAGATAACAGCAACATGATTGGTGAGAAATTCAAAGTTGAAGAAACTGGAAGAGCAGATTTAGAGTAAGTAGGAGTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CAA 72 bp | ATTGTAGAACTTCTCTGCCATTGTTGTATAAAGAAGTaGATTCCTTTACACAGTCCAGGGCAGTTCCAGATT | + |
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Preference number: 6 (lower is better) Translates to: IVELLCHCCIKK*IPLHSPGQFQI Trigger: AATCTGGAACTGCCCTGGACTGTGTAAAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS GCA 72 bp | CCTTTTATCACAGGACTCCATATTGTAGAACTTCTCTaGCATTGTTGTATAAAGAAGTTGATTCCTACAGTC | + |
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Preference number: 6 (lower is better) Translates to: PFITGLHIVELL*HCCIKKLIPTV Trigger: GACTGTAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAATATGGAGTCCTGTGATAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS CCA 72 bp | AGTTCAACGATAGGCAGGTTGTCCAGGACAAATGTGTaGTTTATTCAAACACCAAAGTTTCTTTTACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSTIGRLSRTNV*FIQTPKFLLLS Trigger: TGAAAGTAAAAGAAACTTTGGTGTTTGAATAAACCACACATTTGTCCTGGACAACCTGCCTATCGTTGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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| CDS CAA 72 bp | TATCACAGGACTCCATATTGTAGAACTTCTCTGCCATaGTTGTATAAAGAAGTTGATTCCTTTACACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: YHRTPYCRTSLP*LYKEVDSFTQS Trigger: GGACTGTGTAAAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAATATGGAGTCCTGTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS CAA 72 bp | AAATCATGTACACATCTACAGAAAACCTCATCTTTGTaGTGTTCCAGAGCTTTAAAAGCAAGCAGCACATCT | + |
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Preference number: 6 (lower is better) Translates to: KSCTHLQKTSSL*CSRALKASSTS Trigger: AGATGTGCTGCTTGCTTTTAAAGCTCTGGAACACAACAAAGATGAGGTTTTCTGTAGATGTGTACATGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653888.1 |
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| CDS GCA 72 bp | CCTTTTATCACAGGACTCCATATTGTAGAACTTCTCTaGCATTGTTGTATAAAGAAGTTGATTCCTTTACAC | + |
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Preference number: 6 (lower is better) Translates to: PFITGLHIVELL*HCCIKKLIPLH Trigger: GTGTAAAGGAATCAACTTCTTTATACAACAATGGCAGAGAAGTTCTACAATATGGAGTCCTGTGATAAAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512517.1 |
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| CDS CAA 72 bp | CCAGTTTCTTCAACTTTGAATTTCTCACCAATCATGTaGCTGTTATCTGAACACTTCTACTTTGTCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PVSSTLNFSPIM*LLSEHFYFVFR Trigger: CCTAAAGACAAAGTAGAAGTGTTCAGATAACAGCAACATGATTGGTGAGAAATTCAAAGTTGAAGAAACTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512517.1 ENST00000653888.1 ENST00000669996.1 |
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