Pregenerated sensors for LINC01256 (Homo sapiens)
Ensembl gene IDs: ENSG00000251398Ensembl transcript IDs: ENST00000513270.1, ENST00000667267.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGGCTGGACGAGCAACTTCCAAGTTGGTTCACTCTCATGGCTTTTaGGAGAACAGGAGGCCTCAGTTTTTCACTGGCTGTTGGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: RAGRATSKLVHSHGF*ENRRPQFFTGCWQE Trigger: CTCTTGCCAACAGCCAGTGAAAAACTGAGGCCTCCTGTTCTCCCAAAAGCCATGAGAGTGAACCAACTTGGAAGTTGCTCGTCCAGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667267.1 |
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| CDS CCA 90 bp | AGTTATTTGAAGACTTCACTAGGGCTGGACGAGCAACTTCCAAGTTaGTTCACTCTCATGGCTTTTGGGAGAACAGGAGGCCTCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SYLKTSLGLDEQLPS*FTLMAFGRTGGLSF Trigger: AAAACTGAGGCCTCCTGTTCTCCCAAAAGCCATGAGAGTGAACCAACTTGGAAGTTGCTCGTCCAGCCCTAGTGAAGTCTTCAAATAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS TCA 90 bp | AAGCTTGGTTGTGGACACAGTAGCAGAGAGGGAGCTAGGACATATTaGGTGTTGAAATACGTGGTCATGGAGAAGCAAAGTCTGTTTCAG | + |
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Preference number: 5 (lower is better) Translates to: KLGCGHSSREGARTY*VLKYVVMEKQSLFQ Trigger: CTGAAACAGACTTTGCTTCTCCATGACCACGTATTTCAACACTCAATATGTCCTAGCTCCCTCTCTGCTACTGTGTCCACAACCAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513270.1 |
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| CDS TCA 90 bp | GTTGTGGACACAGTAGCAGAGAGGGAGCTAGGACATATTGAGTGTTaGAATACGTGGTCATGGAGAAGCAAAGTCTGTTTCAGAAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: VVDTVAERELGHIEC*NTWSWRSKVCFRSL Trigger: TAGACTTCTGAAACAGACTTTGCTTCTCCATGACCACGTATTTCAACACTCAATATGTCCTAGCTCCCTCTCTGCTACTGTGTCCACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513270.1 |
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| CDS TCA 90 bp | GTTGTGGACACAGTAGCAGAGAGGGAGCTAGGACATATTGAGTGTTaGAATACGTGGTCATGGAGAAGCAAAGTCTCTTATAAATCTAGA | + |
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Preference number: 5 (lower is better) Translates to: VVDTVAERELGHIEC*NTWSWRSKVSYKSR Trigger: TCTAGATTTATAAGAGACTTTGCTTCTCCATGACCACGTATTTCAACACTCAATATGTCCTAGCTCCCTCTCTGCTACTGTGTCCACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667267.1 |
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| CDS CCA 72 bp | GGCTGGACGAGCAACTTCCAAGTTGGTTCACTCTCATaGCTTTTGGGAGAACAGGAGGCCTCAGTTTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GWTSNFQVGSLS*LLGEQEASVFH Trigger: GTGAAAAACTGAGGCCTCCTGTTCTCCCAAAAGCCATGAGAGTGAACCAACTTGGAAGTTGCTCGTCCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS CAA 72 bp | GAAGACTTCACTAGGGCTGGACGAGCAACTTCCAAGTaGGTTCACTCTCATGGCTTTTGGGAGAACAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: EDFTRAGRATSK*VHSHGFWENRR Trigger: CCTCCTGTTCTCCCAAAAGCCATGAGAGTGAACCAACTTGGAAGTTGCTCGTCCAGCCCTAGTGAAGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS GCA 72 bp | GGGTCTCTCAACAACAGTCAAGCTTTCAGCTGGGGTTaGAGTTATTTGAAGACTTCACTAGGGCTGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: GSLNNSQAFSWG*SYLKTSLGLDE Trigger: CTCGTCCAGCCCTAGTGAAGTCTTCAAATAACTGCAACCCCAGCTGAAAGCTTGACTGTTGTTGAGAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS CAA 90 bp | TTCTGGCTTAGGGTCTCTCAACAACAGTCAAGCTTTCAGCTGGGGTaGCAGTTATTTGAAGACTTCACTAGGGCTGGACGAGCAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: FWLRVSQQQSSFQLG*QLFEDFTRAGRATS Trigger: GGAAGTTGCTCGTCCAGCCCTAGTGAAGTCTTCAAATAACTGCAACCCCAGCTGAAAGCTTGACTGTTGTTGAGAGACCCTAAGCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS CCA 72 bp | GGCTTAGGGTCTCTCAACAACAGTCAAGCTTTCAGCTaGGGTTGCAGTTATTTGAAGACTTCACTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GLGSLNNSQAFS*GCSYLKTSLGL Trigger: CAGCCCTAGTGAAGTCTTCAAATAACTGCAACCCCAGCTGAAAGCTTGACTGTTGTTGAGAGACCCTAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS CAA 72 bp | AGGGTCTCTCAACAACAGTCAAGCTTTCAGCTGGGGTaGCAGTTATTTGAAGACTTCACTAGGGCTGGACGA | + |
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Preference number: 6 (lower is better) Translates to: RVSQQQSSFQLG*QLFEDFTRAGR Trigger: TCGTCCAGCCCTAGTGAAGTCTTCAAATAACTGCAACCCCAGCTGAAAGCTTGACTGTTGTTGAGAGACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS TCA 72 bp | TGTGGACACAGTAGCAGAGAGGGAGCTAGGACATATTaGGTGTTGAAATACGTGGTCATGGAGAAGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: CGHSSREGARTY*VLKYVVMEKQS Trigger: ACTTTGCTTCTCCATGACCACGTATTTCAACACTCAATATGTCCTAGCTCCCTCTCTGCTACTGTGTCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS TCA 72 bp | ACAGTAGCAGAGAGGGAGCTAGGACATATTGAGTGTTaGAATACGTGGTCATGGAGAAGCAAAGTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TVAERELGHIEC*NTWSWRSKVCF Trigger: GAAACAGACTTTGCTTCTCCATGACCACGTATTTCAACACTCAATATGTCCTAGCTCCCTCTCTGCTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513270.1 |
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| CDS TCA 72 bp | ACAGTAGCAGAGAGGGAGCTAGGACATATTGAGTGTTaGAATACGTGGTCATGGAGAAGCAAAGTCTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: TVAERELGHIEC*NTWSWRSKVSY Trigger: ATAAGAGACTTTGCTTCTCCATGACCACGTATTTCAACACTCAATATGTCCTAGCTCCCTCTCTGCTACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667267.1 |
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| CDS CAA 90 bp | TTGCATCAAAAATTGTTCCTACTTGCAGATCCAGAAACCTCATGCTaGGAGAACTGTATGTTTCAGAAGTCTAGTGATCCAGAAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LHQKLFLLADPETSC*ENCMFQKSSDPEVA Trigger: AGCCACTTCTGGATCACTAGACTTCTGAAACATACAGTTCTCCAAGCATGAGGTTTCTGGATCTGCAAGTAGGAACAATTTTTGATGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667267.1 |
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| CDS CAA 90 bp | ATCAGATTCAGAACATCCTCAGCTTATTTAGTTTATGATTTAAGCTaGGTTGTGGACACAGTAGCAGAGAGGGAGCTAGGACATATTGAG | + |
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Preference number: 6 (lower is better) Translates to: IRFRTSSAYLVYDLS*VVDTVAERELGHIE Trigger: CTCAATATGTCCTAGCTCCCTCTCTGCTACTGTGTCCACAACCAAGCTTAAATCATAAACTAAATAAGCTGAGGATGTTCTGAATCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000513270.1 ENST00000667267.1 |
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| CDS CAA 72 bp | AAATTGTTCCTACTTGCAGATCCAGAAACCTCATGCTaGGAGAACTGTATGTTTCAGAAGTCTAGTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: KLFLLADPETSC*ENCMFQKSSDP Trigger: TGGATCACTAGACTTCTGAAACATACAGTTCTCCAAGCATGAGGTTTCTGGATCTGCAAGTAGGAACAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667267.1 |
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