Pregenerated sensors for LINC01254 (Homo sapiens)
Ensembl gene IDs: ENSG00000260913Ensembl transcript IDs: ENST00000566225.1, ENST00000567609.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACAGGGGGCAGGCAGAATGCCACCACTCGGCCAAGAAGGCGTGTTTaGCTACGACAGCCCAGAGTCCAGAGCCACGGCACTTCCGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: TGGRQNATTRPRRRV*LRQPRVQSHGTSGC Trigger: GCAACCGGAAGTGCCGTGGCTCTGGACTCTGGGCTGTCGTAGCCAAACACGCCTTCTTGGCCGAGTGGTGGCATTCTGCCTGCCCCCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS TCA 90 bp | AGGCCCCGTCACAGGCTCTGCTGGCCAGTGGCAGCTGTGCACGGATaGATAACTGCTGCAGGCCTGTGTGAGCTTCTGCATGGCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: RPRHRLCWPVAAVHG*ITAAGLCELLHGWS Trigger: GCTCCAGCCATGCAGAAGCTCACACAGGCCTGCAGCAGTTATTCATCCGTGCACAGCTGCCACTGGCCAGCAGAGCCTGTGACGGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 90 bp | GCTGGGGAGCAGAATCTCAATGATGCCCACAGGGGGCAGGCAGAATaGCACCACTCGGCCAAGAAGGCGTGTTTGGCTACGACAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: AGEQNLNDAHRGQAE*HHSAKKACLATTAQ Trigger: CTGGGCTGTCGTAGCCAAACACGCCTTCTTGGCCGAGTGGTGGCATTCTGCCTGCCCCCTGTGGGCATCATTGAGATTCTGCTCCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS TCA 90 bp | GCCAGTGGCAGCTGTGCACGGATGAATAACTGCTGCAGGCCTGTGTaGGCTTCTGCATGGCTGGAGCAGCACTGTGTCCCACAGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: ASGSCARMNNCCRPV*ASAWLEQHCVPQQV Trigger: TACCTGCTGTGGGACACAGTGCTGCTCCAGCCATGCAGAAGCTCACACAGGCCTGCAGCAGTTATTCATCCGTGCACAGCTGCCACTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 90 bp | CCACAAAAAGTGTTACATGGGCAGAGAGGAAAAGCCATTGGCAGCTaGGCCTTCCCATTTGTGAGCAGAGTCTGCCAGCCTCCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PQKVLHGQRGKAIGS*AFPFVSRVCQPPPA Trigger: AGCTGGAGGAGGCTGGCAGACTCTGCTCACAAATGGGAAGGCCCAGCTGCCAATGGCTTTTCCTCTCTGCCCATGTAACACTTTTTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 90 bp | CACACAGTGGGTGTGATTCTGCCACCAGTCAGCTGCCACCAACGATaGCTGGCCACAACAAAGCTGAATGACATGGGGCATATCACACCA | + |
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Preference number: 5 (lower is better) Translates to: HTVGVILPPVSCHQR*LATTKLNDMGHITP Trigger: TGGTGTGATATGCCCCATGTCATTCAGCTTTGTTGTGGCCAGTCATCGTTGGTGGCAGCTGACTGGTGGCAGAATCACACCCACTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 90 bp | CATCCTCAAATCACCAGCCTTCTGCAGAGAATCACACAGTGGGTGTaGTTCTGCCACCAGTCAGCTGCCACCAACGATGACTGGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: HPQITSLLQRITQWV*FCHQSAATNDDWPQ Trigger: TTGTGGCCAGTCATCGTTGGTGGCAGCTGACTGGTGGCAGAATCACACCCACTGTGTGATTCTCTGCAGAAGGCTGGTGATTTGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 90 bp | TCAGGCTTGGCGGTATCGCATTCCTGGCATAATTTTCCATCCTTGTaGCTGCAAGGCATTACTGTGTGGGAACGGCACCCTTGCCTAATG | + |
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Preference number: 5 (lower is better) Translates to: SGLAVSHSWHNFPSL*LQGITVWERHPCLM Trigger: CATTAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGGAAAATTATGCCAGGAATGCGATACCGCCAAGCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 90 bp | TGCCACCAGTCAGCTGCCACCAACGATGACTGGCCACAACAAAGCTaGATGACATGGGGCATATCACACCAAAGGACCTCTCTTTTGATG | + |
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Preference number: 5 (lower is better) Translates to: CHQSAATNDDWPQQS*MTWGISHQRTSLLM Trigger: CATCAAAAGAGAGGTCCTTTGGTGTGATATGCCCCATGTCATTCAGCTTTGTTGTGGCCAGTCATCGTTGGTGGCAGCTGACTGGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 90 bp | CCATCCTTGTGCCTGCAAGGCATTACTGTGTGGGAACGGCACCCTTaGCTAATGATCTTGGCCAAATCCAGTATCTCTCATTCACATGGG | + |
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Preference number: 5 (lower is better) Translates to: PSLCLQGITVWERHP*LMILAKSSISHSHG Trigger: CCCATGTGAATGAGAGATACTGGATTTGGCCAAGATCATTAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 90 bp | CATTCACACAATTTCGGCTTCACTCTGTGGTTTGGATGCAGATTGTaGAAATCACAGCCTGGACCCGGAGAACTTGTCGCAGCAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: HSHNFGFTLWFGCRL*KSQPGPGELVAAAA Trigger: TGCTGCTGCTGCGACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTGTGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS GCA 90 bp | ACTCCCGATCATTCACACAATTTCGGCTTCACTCTGTGGTTTGGATaGAGATTGTGGAAATCACAGCCTGGACCCGGAGAACTTGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: TPDHSHNFGFTLWFG*RLWKSQPGPGELVA Trigger: TGCGACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTGTGAATGATCGGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CCA 90 bp | AAACACTCCCGATCATTCACACAATTTCGGCTTCACTCTGTGGTTTaGATGCAGATTGTGGAAATCACAGCCTGGACCCGGAGAACTTGT | + |
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Preference number: 5 (lower is better) Translates to: KHSRSFTQFRLHSVV*MQIVEITAWTRRTC Trigger: ACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTGTGAATGATCGGGAGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS TCA 90 bp | GGTCCGGTCCCAACCTCAGGAAATCCTGCATCACGTTTGCTGTTCTaGTCTAGAAGAAAGGTTGACAAATCTTTCCTTAGCTTTTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GPVPTSGNPASRLLF*SRRKVDKSFLSFSQ Trigger: CTGAGAAAAGCTAAGGAAAGATTTGTCAACCTTTCTTCTAGATCAGAACAGCAAACGTGATGCAGGATTTCCTGAGGTTGGGACCGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 90 bp | AACGTTTCGGTCCGGTCCCAACCTCAGGAAATCCTGCATCACGTTTaGTGTTCTGATCTAGAAGAAAGGTTGACAAATCTTTCCTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: NVSVRSQPQEILHHV*CSDLEERLTNLSLA Trigger: AGCTAAGGAAAGATTTGTCAACCTTTCTTCTAGATCAGAACAGCAAACGTGATGCAGGATTTCCTGAGGTTGGGACCGGACCGAAACGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 90 bp | TTGCAGATGAGAAAACATGCTCAGAGTCATTGTCTAATGTGCCTGTaGTCACAGAGGTGGTCAGTCACAAACCTGGAATTTGAACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LQMRKHAQSHCLMCL*SQRWSVTNLEFELW Trigger: CCAGAGTTCAAATTCCAGGTTTGTGACTGACCACCTCTGTGACCACAGGCACATTAGACAATGACTCTGAGCATGTTTTCTCATCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS TCA 90 bp | ATCTTAAGGCAAAGTGAAAACGCTTGTGAAAATGCATGGTATTCCTaGGTTCAGAACTTCCTGTCCATCCTCAAATCACCAGCCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ILRQSENACENAWYS*VQNFLSILKSPAFC Trigger: GCAGAAGGCTGGTGATTTGAGGATGGACAGGAAGTTCTGAACTCAGGAATACCATGCATTTTCACAAGCGTTTTCACTTTGCCTTAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 90 bp | TGTGTTTTGCAGATGAGAAAACATGCTCAGAGTCATTGTCTAATGTaGCTGTGGTCACAGAGGTGGTCAGTCACAAACCTGGAATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: CVLQMRKHAQSHCLM*LWSQRWSVTNLEFE Trigger: TTCAAATTCCAGGTTTGTGACTGACCACCTCTGTGACCACAGGCACATTAGACAATGACTCTGAGCATGTTTTCTCATCTGCAAAACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS TCA 90 bp | CATATCACACCAAAGGACCTCTCTTTTGATGCTAGTATTTATCTTTaGGCCTTGCCTCTTTTAGAGGTGGCCTACATGACTTTAGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: HITPKDLSFDASIYL*ALPLLEVAYMTLVS Trigger: ACTGACTAAAGTCATGTAGGCCACCTCTAAAAGAGGCAAGGCTCAAAGATAAATACTAGCATCAAAAGAGAGGTCCTTTGGTGTGATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 90 bp | ATTAAAATACCCGTTTTTCAAATAGAGGAAGTGGGTTCTTTGAAATaGACAGAATTCAGAAGCACTCTGCAGCATCTTGGAAATGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: IKIPVFQIEEVGSLK*TEFRSTLQHLGNGG Trigger: GCCACCATTTCCAAGATGCTGCAGAGTGCTTCTGAATTCTGTTCATTTCAAAGAACCCACTTCCTCTATTTGAAAAACGGGTATTTTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 90 bp | CACAGGGGGCAGGCAGAATGCCACCACTCGGCCAAGAAGGCGTGTTaGGCTACGACAGCCCAGAGTCCAGAGCCACGGCACTTCCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: HRGQAECHHSAKKAC*ATTAQSPEPRHFRL Trigger: CAACCGGAAGTGCCGTGGCTCTGGACTCTGGGCTGTCGTAGCCAAACACGCCTTCTTGGCCGAGTGGTGGCATTCTGCCTGCCCCCTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS CAA 72 bp | CAGGCAGAATGCCACCACTCGGCCAAGAAGGCGTGTTaGGCTACGACAGCCCAGAGTCCAGAGCCACGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QAECHHSAKKAC*ATTAQSPEPRH Trigger: GTGCCGTGGCTCTGGACTCTGGGCTGTCGTAGCCAAACACGCCTTCTTGGCCGAGTGGTGGCATTCTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS TCA 72 bp | CACAGGCTCTGCTGGCCAGTGGCAGCTGTGCACGGATaGATAACTGCTGCAGGCCTGTGTGAGCTTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: HRLCWPVAAVHG*ITAAGLCELLH Trigger: ATGCAGAAGCTCACACAGGCCTGCAGCAGTTATTCATCCGTGCACAGCTGCCACTGGCCAGCAGAGCCTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 90 bp | GGTTTGGATGCAGATTGTGGAAATCACAGCCTGGACCCGGAGAACTaGTCGCAGCAGCAGCAGGGTTTCCGGACCCAGTATCTCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GLDADCGNHSLDPEN*SQQQQGFRTQYLPS Trigger: GGAAGGGAGATACTGGGTCCGGAAACCCTGCTGCTGCTGCGACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS TCA 72 bp | AGCTGTGCACGGATGAATAACTGCTGCAGGCCTGTGTaGGCTTCTGCATGGCTGGAGCAGCACTGTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SCARMNNCCRPV*ASAWLEQHCVP Trigger: TGGGACACAGTGCTGCTCCAGCCATGCAGAAGCTCACACAGGCCTGCAGCAGTTATTCATCCGTGCACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 72 bp | GCAGATTGTGGAAATCACAGCCTGGACCCGGAGAACTaGTCGCAGCAGCAGCAGGGTTTCCGGACCCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: ADCGNHSLDPEN*SQQQQGFRTQY Trigger: ATACTGGGTCCGGAAACCCTGCTGCTGCTGCGACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CAA 90 bp | GTCCCACAGCAGGTATCTCCTGGTGGTAGAAGTGGTGCCCTTCCCTaGGTTAAGCAGAGTGTGGACTGGCCAGTCTCAAGCTTCCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: VPQQVSPGGRSGALP*VKQSVDWPVSSFPQ Trigger: TTGAGGGAAGCTTGAGACTGGCCAGTCCACACTCTGCTTAACCAAGGGAAGGGCACCACTTCTACCACCAGGAGATACCTGCTGTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 72 bp | CAGGTATCTCCTGGTGGTAGAAGTGGTGCCCTTCCCTaGGTTAAGCAGAGTGTGGACTGGCCAGTCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: QVSPGGRSGALP*VKQSVDWPVSS Trigger: GCTTGAGACTGGCCAGTCCACACTCTGCTTAACCAAGGGAAGGGCACCACTTCTACCACCAGGAGATACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 90 bp | ACCCAACAGGCCTGTGCCAACGTCGTGTCCTCTCTGTGTTCAGGCTaGGCGGTATCGCATTCCTGGCATAATTTTCCATCCTTGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TQQACANVVSSLCSG*AVSHSWHNFPSLCL Trigger: CAGGCACAAGGATGGAAAATTATGCCAGGAATGCGATACCGCCAAGCCTGAACACAGAGAGGACACGACGTTGGCACAGGCCTGTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 72 bp | GGTGTGATTCTGCCACCAGTCAGCTGCCACCAACGATaGCTGGCCACAACAAAGCTGAATGACATGGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GVILPPVSCHQR*LATTKLNDMGH Trigger: ATGCCCCATGTCATTCAGCTTTGTTGTGGCCAGTCATCGTTGGTGGCAGCTGACTGGTGGCAGAATCACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 72 bp | TCTGTGGTTTGGATGCAGATTGTGGAAATCACAGCCTaGACCCGGAGAACTTGTCGCAGCAGCAGCAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SVVWMQIVEITA*TRRTCRSSSRV Trigger: AACCCTGCTGCTGCTGCGACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CAA 72 bp | GCCTGTGCCAACGTCGTGTCCTCTCTGTGTTCAGGCTaGGCGGTATCGCATTCCTGGCATAATTTTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: ACANVVSSLCSG*AVSHSWHNFPS Trigger: GGATGGAAAATTATGCCAGGAATGCGATACCGCCAAGCCTGAACACAGAGAGGACACGACGTTGGCACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 90 bp | CTGCAAGGCATTACTGTGTGGGAACGGCACCCTTGCCTAATGATCTaGGCCAAATCCAGTATCTCTCATTCACATGGGTGCCCCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LQGITVWERHPCLMI*AKSSISHSHGCPLA Trigger: GGCAAGGGGGCACCCATGTGAATGAGAGATACTGGATTTGGCCAAGATCATTAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 72 bp | GGGAGGGCAAGGCCAAAGGGCTTCCATCCTTCACTGTaGGGAATGCAAGTTCCAGAAGCATGGATGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: GRARPKGFHPSL*GMQVPEAWMLK Trigger: CTTCAACATCCATGCTTCTGGAACTTGCATTCCTCACAGTGAAGGATGGAAGCCCTTTGGCCTTGCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS GCA 72 bp | GCGGTATCGCATTCCTGGCATAATTTTCCATCCTTGTaGCTGCAAGGCATTACTGTGTGGGAACGGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: AVSHSWHNFPSL*LQGITVWERHP Trigger: AGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGGAAAATTATGCCAGGAATGCGATACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 72 bp | CCTGTGCCAACGTCGTGTCCTCTCTGTGTTCAGGCTTaGCGGTATCGCATTCCTGGCATAATTTTCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: PVPTSCPLCVQA*RYRIPGIIFHP Trigger: AGGATGGAAAATTATGCCAGGAATGCGATACCGCCAAGCCTGAACACAGAGAGGACACGACGTTGGCACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 72 bp | TGTGCCTGTGGTCACAGAGGTGGTCAGTCACAAACCTaGAATTTGAACTCTGGGTGTTCTCACCTGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: CACGHRGGQSQT*NLNSGCSHLEP Trigger: TGGCTCCAGGTGAGAACACCCAGAGTTCAAATTCCAGGTTTGTGACTGACCACCTCTGTGACCACAGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS CAA 90 bp | TGTTCAGGCTTGGCGGTATCGCATTCCTGGCATAATTTTCCATCCTaGTGCCTGCAAGGCATTACTGTGTGGGAACGGCACCCTTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: CSGLAVSHSWHNFPS*CLQGITVWERHPCL Trigger: TAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGGAAAATTATGCCAGGAATGCGATACCGCCAAGCCTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 72 bp | TCAGCTGCCACCAACGATGACTGGCCACAACAAAGCTaGATGACATGGGGCATATCACACCAAAGGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: SAATNDDWPQQS*MTWGISHQRTS Trigger: AGAGGTCCTTTGGTGTGATATGCCCCATGTCATTCAGCTTTGTTGTGGCCAGTCATCGTTGGTGGCAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 72 bp | TATCGCATTCCTGGCATAATTTTCCATCCTTGTGCCTaGAAGGCATTACTGTGTGGGAACGGCACCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: YRIPGIIFHPCA*KALLCGNGTLA Trigger: GGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGGAAAATTATGCCAGGAATGCGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 72 bp | CAGCCCATCTCTTCTCTATCTCACCAACTGACAGGGTaGATACAAAGCCTCAAGCTGTGTCCACACATTCCC | + |
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Preference number: 6 (lower is better) Translates to: QPISSLSHQLTG*IQSLKLCPHIP Trigger: GGGAATGTGTGGACACAGCTTGAGGCTTTGTATCCACCCTGTCAGTTGGTGAGATAGAGAAGAGATGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 72 bp | GTGCCTGCAAGGCATTACTGTGTGGGAACGGCACCCTaGCCTAATGATCTTGGCCAAATCCAGTATCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VPARHYCVGTAP*PNDLGQIQYLS Trigger: TGAGAGATACTGGATTTGGCCAAGATCATTAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 72 bp | TTGGCGGTATCGCATTCCTGGCATAATTTTCCATCCTaGTGCCTGCAAGGCATTACTGTGTGGGAACGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LAVSHSWHNFPS*CLQGITVWERH Trigger: GTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGGAAAATTATGCCAGGAATGCGATACCGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 90 bp | TCCATCCTTGTGCCTGCAAGGCATTACTGTGTGGGAACGGCACCCTaGCCTAATGATCTTGGCCAAATCCAGTATCTCTCATTCACATGG | + |
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Preference number: 6 (lower is better) Translates to: SILVPARHYCVGTAP*PNDLGQIQYLSFTW Trigger: CCATGTGAATGAGAGATACTGGATTTGGCCAAGATCATTAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CAA 90 bp | GATCATTCACACAATTTCGGCTTCACTCTGTGGTTTGGATGCAGATaGTGGAAATCACAGCCTGGACCCGGAGAACTTGTCGCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DHSHNFGFTLWFGCR*WKSQPGPGELVAAA Trigger: TGCTGCTGCGACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTGTGAATGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS TCA 72 bp | CTGCCACCAACGATGACTGGCCACAACAAAGCTGAATaGCATGGGGCATATCACACCAAAGGACCTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LPPTMTGHNKAE*HGAYHTKGPLF Trigger: AAAGAGAGGTCCTTTGGTGTGATATGCCCCATGTCATTCAGCTTTGTTGTGGCCAGTCATCGTTGGTGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 72 bp | TGCCTGCAAGGCATTACTGTGTGGGAACGGCACCCTTaGCTAATGATCTTGGCCAAATCCAGTATCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CLQGITVWERHP*LMILAKSSISH Trigger: ATGAGAGATACTGGATTTGGCCAAGATCATTAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS CCA 72 bp | AATTTCGGCTTCACTCTGTGGTTTGGATGCAGATTGTaGAAATCACAGCCTGGACCCGGAGAACTTGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: NFGFTLWFGCRL*KSQPGPGELVA Trigger: TGCGACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CCA 72 bp | CGATCATTCACACAATTTCGGCTTCACTCTGTGGTTTaGATGCAGATTGTGGAAATCACAGCCTGGACCCGG | + |
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Preference number: 6 (lower is better) Translates to: RSFTQFRLHSVV*MQIVEITAWTR Trigger: CCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTGTGAATGATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CAA 72 bp | CACAATTTCGGCTTCACTCTGTGGTTTGGATGCAGATaGTGGAAATCACAGCCTGGACCCGGAGAACTTGTC | + |
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Preference number: 6 (lower is better) Translates to: HNFGFTLWFGCR*WKSQPGPGELV Trigger: GACAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CAA 72 bp | CCGATCATTCACACAATTTCGGCTTCACTCTGTGGTTaGGATGCAGATTGTGGAAATCACAGCCTGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: PIIHTISASLCG*DADCGNHSLDP Trigger: CGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTGTGAATGATCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CAA 90 bp | CAAACACTCCCGATCATTCACACAATTTCGGCTTCACTCTGTGGTTaGGATGCAGATTGTGGAAATCACAGCCTGGACCCGGAGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: QTLPIIHTISASLCG*DADCGNHSLDPENL Trigger: CAAGTTCTCCGGGTCCAGGCTGTGATTTCCACAATCTGCATCCAAACCACAGAGTGAAGCCGAAATTGTGTGAATGATCGGGAGTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CCA 72 bp | AATTTTCCATCCTTGTGCCTGCAAGGCATTACTGTGTaGGAACGGCACCCTTGCCTAATGATCTTGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: NFPSLCLQGITV*ERHPCLMILAK Trigger: TTTGGCCAAGATCATTAGGCAAGGGTGCCGTTCCCACACAGTAATGCCTTGCAGGCACAAGGATGGAAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS GCA 72 bp | GTCTCATCCCCTTTCTCCCTACCAGTTTTCCACATTTaGAGTTATTGTTCCCTCTCATACAAGCCAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSSPFSLPVFHI*SYCSLSYKPGP Trigger: AGGACCTGGCTTGTATGAGAGGGAACAATAACTGCAAATGTGGAAAACTGGTAGGGAGAAAGGGGATGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS GCA 72 bp | CAGATGAGAAAACATGCTCAGAGTCATTGTCTAATGTaGCTGTGGTCACAGAGGTGGTCAGTCACAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: QMRKHAQSHCLM*LWSQRWSVTNL Trigger: CAGGTTTGTGACTGACCACCTCTGTGACCACAGGCACATTAGACAATGACTCTGAGCATGTTTTCTCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS CCA 72 bp | AAGCTTCCCTCAAAAGTTCTTCCATCACCAGATACCTaGGTTTCTCCTAAGGCAAGGGATGCTGACTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: KLPSKVLPSPDT*VSPKARDADFP Trigger: TGGAAAGTCAGCATCCCTTGCCTTAGGAGAAACCCAGGTATCTGGTGATGGAAGAACTTTTGAGGGAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 72 bp | CCAAAGGACCTCTCTTTTGATGCTAGTATTTATCTTTaGGCCTTGCCTCTTTTAGAGGTGGCCTACATGACT | + |
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Preference number: 6 (lower is better) Translates to: PKDLSFDASIYL*ALPLLEVAYMT Trigger: AGTCATGTAGGCCACCTCTAAAAGAGGCAAGGCTCAAAGATAAATACTAGCATCAAAAGAGAGGTCCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 72 bp | CCCGTTTTTCAAATAGAGGAAGTGGGTTCTTTGAAATaGACAGAATTCAGAAGCACTCTGCAGCATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PVFQIEEVGSLK*TEFRSTLQHLG Trigger: TCCAAGATGCTGCAGAGTGCTTCTGAATTCTGTTCATTTCAAAGAACCCACTTCCTCTATTTGAAAAACGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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| CDS TCA 72 bp | GATATTTCCATTTGTCAGCGTAGTTACCATTTAGAGTaGTACAAAATCAGTCTCATCCCCTTTCTCCCTACC | + |
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Preference number: 6 (lower is better) Translates to: DISICQRSYHLE*YKISLIPFLPT Trigger: GGTAGGGAGAAAGGGGATGAGACTGATTTTGTATCACTCTAAATGGTAACTACGCTGACAAATGGAAATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566225.1 |
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| CDS GCA 72 bp | ATTTGGATAAAACGTGATAACACTGTGGTTGAACTCTaGAAACACTCCCGATCATTCACACAATTTCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: IWIKRDNTVVEL*KHSRSFTQFRL Trigger: AAGCCGAAATTGTGTGAATGATCGGGAGTGTTTGCAGAGTTCAACCACAGTGTTATCACGTTTTATCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567609.1 |
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| CDS CCA 72 bp | GAAATGAACAGAATTCAGAAGCACTCTGCAGCATCTTaGAAATGGTGGCAAAGCAATTATTTTAAGTACAAG | + |
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Preference number: 6 (lower is better) Translates to: EMNRIQKHSAAS*KWWQSNYFKYK Trigger: CTTGTACTTAAAATAATTGCTTTGCCACCATTTCCAAGATGCTGCAGAGTGCTTCTGAATTCTGTTCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000566225.1 ENST00000567609.1 |
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