Pregenerated sensors for LINC01252 (Homo sapiens)
Ensembl gene IDs: ENSG00000247157Ensembl transcript IDs: ENST00000499291.6, ENST00000541162.1, ENST00000545239.2, ENST00000665563.1, ENST00000667189.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTTATTGCCCCTTCCTGTTTAATGGGGTTCATGGAGGTCCATACCTaGCAGCCATGCCAGTCCTGCTCTCTCCTGTGCCTGAGTAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LIAPSCLMGFMEVHT*QPCQSCSLLCLSSD Trigger: ATCACTACTCAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGGTATGGACCTCCATGAACCCCATTAAACAGGAAGGGGCAATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667189.1 |
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| CDS GCA 90 bp | AATGAGACTGCTCTTTGGTTCAGCCTTTGCCAGAATACAAGGACCTaGCCAGGCTCTGTCACAGGCTGTGCTAACAAACCCAGCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: NETALWFSLCQNTRT*PGSVTGCANKPSLG Trigger: ACCAAGGCTGGGTTTGTTAGCACAGCCTGTGACAGAGCCTGGGCAGGTCCTTGTATTCTGGCAAAGGCTGAACCAAAGAGCAGTCTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS GCA 90 bp | CCTTCCTGTTTAATGGGGTTCATGGAGGTCCATACCTGCCAGCCATaGCAGTCCTGCTCTCTCCTGTGCCTGAGTAGTGATTTAGGTATC | + |
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Preference number: 5 (lower is better) Translates to: PSCLMGFMEVHTCQP*QSCSLLCLSSDLGI Trigger: GATACCTAAATCACTACTCAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGGTATGGACCTCCATGAACCCCATTAAACAGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667189.1 |
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| CDS GCA 90 bp | AGACATGGAGCAGGGACAAAGCTTTCTTCCCACCTGGAAGGAATCTaGGCTTTCCTCATGAGTCTTCTGTTCAAAGGACAGTACCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RHGAGTKLSSHLEGI*AFLMSLLFKGQYPQ Trigger: CTGGGGGTACTGTCCTTTGAACAGAAGACTCATGAGGAAAGCGCAGATTCCTTCCAGGTGGGAAGAAAGCTTTGTCCCTGCTCCATGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS GCA 90 bp | TGCTACATAGAGAACTGCCAGCCATGCCAGTCCTGCTCTCTCCTGTaGCTGAGTAGTGATTTAGGTATCATTCTTGCCCGTGCAGACTGT | + |
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Preference number: 5 (lower is better) Translates to: CYIENCQPCQSCSLL*LSSDLGIILARADC Trigger: ACAGTCTGCACGGGCAAGAATGATACCTAAATCACTACTCAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGTTCTCTATGTAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000545239.2 |
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| CDS GCA 90 bp | CCTCATTCTTCTCTCCCATCTTCCATAGCTCATTCCTGCCAGCCATaGCAGTCCTGCTCTCTCCTGTGCCTGAGTAGTGATTTAGGTATC | + |
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Preference number: 5 (lower is better) Translates to: PHSSLPSSIAHSCQP*QSCSLLCLSSDLGI Trigger: GATACCTAAATCACTACTCAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGGAATGAGCTATGGAAGATGGGAGAGAAGAATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541162.1 |
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| CDS GCA 90 bp | TTAATGGGGTTCATGGAGGTCCATACCTGCCAGCCATGCCAGTCCTaGTCTCTCCTGTGCCTGAGTAGTGATTTAGGTATCATTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LMGFMEVHTCQPCQS*SLLCLSSDLGIILA Trigger: GGCAAGAATGATACCTAAATCACTACTCAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGGTATGGACCTCCATGAACCCCATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667189.1 |
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| CDS CCA 90 bp | GCTAACAAACCCAGCCTTGGTTTTGCTCACAGAACTGAAAGAGGCTaGGACATCATTAGGGAAACGGAGTCGAACAGCCCTGCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ANKPSLGFAHRTERG*DIIRETESNSPALS Trigger: AGAGAGAGCAGGGCTGTTCGACTCCGTTTCCCTAATGATGTCCCAGCCTCTTTCAGTTCTGTGAGCAAAACCAAGGCTGGGTTTGTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS CCA 90 bp | CTTGATAAGGATCAGCTGGAGCCAGTCACAGCCTACGCTAGTTTGTaGGCAAGAAGAAAAGCACTTAAAGCAAACTCCCACCCTATGTGG | + |
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Preference number: 5 (lower is better) Translates to: LDKDQLEPVTAYASL*ARRKALKANSHPMW Trigger: CCACATAGGGTGGGAGTTTGCTTTAAGTGCTTTTCTTCTTGCCCACAAACTAGCGTAGGCTGTGACTGGCTCCAGCTGATCCTTATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000665563.1 |
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| CDS TCA 90 bp | AGTGTTACAGTTCTTAAAGGCGGCGTGTCCGGAGTTTGTTCCTTCTaGTGTTCAGATGTGTTTGGAGTTTCTTCCTTCTGGTGGGTTCGT | + |
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Preference number: 5 (lower is better) Translates to: SVTVLKGGVSGVCSF*CSDVFGVSSFWWVR Trigger: ACGAACCCACCAGAAGGAAGAAACTCCAAACACATCTGAACATCAGAAGGAACAAACTCCGGACACGCCGCCTTTAAGAACTGTAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499291.6 |
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| CDS CCA 90 bp | TTTCAGCCTAAGTTCCTAGGCAAGCTTACTTTCCCTGGTTTGAGTTaGGGAGGATGGCGTTACTCTTTAGTAATTTTGTTGCCCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FQPKFLGKLTFPGLS*GGWRYSLVILLPFL Trigger: AAGAAAGGGCAACAAAATTACTAAAGAGTAACGCCATCCTCCCCAACTCAAACCAGGGAAAGTAAGCTTGCCTAGGAACTTAGGCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS TCA 90 bp | GTACAACATAGTAAATTTCGACCTATTTTACACCAAAGAGGCAACTaGCACAATCAAGATAATGAACATGGCTGGGCAAGGTGGCTCACG | + |
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Preference number: 5 (lower is better) Translates to: VQHSKFRPILHQRGN*HNQDNEHGWARWLT Trigger: CGTGAGCCACCTTGCCCAGCCATGTTCATTATCTTGATTGTGTCAGTTGCCTCTTTGGTGTAAAATAGGTCGAAATTTACTATGTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665563.1 |
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| CDS CCA 90 bp | TCTTTTTGGTTTCAAAACGACTGTTGCATCTCCTGGCAGCTCAAGTaGAAAGAAGACAGAAATTGGAGAGGAATGCACCAGAAGACTTAT | + |
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Preference number: 5 (lower is better) Translates to: SFWFQNDCCISWQLK*KEDRNWRGMHQKTY Trigger: ATAAGTCTTCTGGTGCATTCCTCTCCAATTTCTGTCTTCTTTCCACTTGAGCTGCCAGGAGATGCAACAGTCGTTTTGAAACCAAAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000667189.1 |
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| CDS CCA 72 bp | CTTCCATGGTGTTGGGGGAAGGACACCCGCACATCTTaGGGAGGAGACAGGAGAAAGACGCGCTTCCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: LPWCWGKDTRTS*GGDRRKTRFPE Trigger: TTCCGGGAAGCGCGTCTTTCTCCTGTCTCCTCCCCAAGATGTGCGGGTGTCCTTCCCCCAACACCATGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000499291.6 ENST00000541162.1 ENST00000545239.2 ENST00000667189.1 |
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| CDS CCA 72 bp | TATTGCAAAGAGCGAAAGGACAAAGCCTCCACAGTGTaGAAGGGGACCCGAGCGCGTTGCCACTGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: YCKERKDKASTV*KGTRARCHCWL Trigger: GAGCCAGCAGTGGCAACGCGCTCGGGTCCCCTTCCACACTGTGGAGGCTTTGTCCTTTCGCTCTTTGCAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499291.6 |
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| CDS TCA 72 bp | CTGTCGACTTCAAGAATGAAGCCGCGGACCCTCGCGTaGGTGTTACAGTTCTTAAAGGCGGCGTGTCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSTSRMKPRTLA*VLQFLKAACPE Trigger: CTCCGGACACGCCGCCTTTAAGAACTGTAACACTCACGCGAGGGTCCGCGGCTTCATTCTTGAAGTCGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499291.6 |
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| CDS GCA 72 bp | CCTTCCTGTTTAATGGGGTTCATGGAGGTCCATACCTaGCAGCCATGCCAGTCCTGCTCTCTCCTGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PSCLMGFMEVHT*QPCQSCSLLCL Trigger: CAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGGTATGGACCTCCATGAACCCCATTAAACAGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667189.1 |
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| CDS TCA 72 bp | CTGGGCGACAGAGCAAGACTCTGTCGACTTCAAGAATaGAGCCGCGGACCCTCGCGTGAGTGTTACAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LGDRARLCRLQE*SRGPSRECYSS Trigger: AGAACTGTAACACTCACGCGAGGGTCCGCGGCTTCATTCTTGAAGTCGACAGAGTCTTGCTCTGTCGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499291.6 |
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| CDS GCA 72 bp | TGCAAATGGAGATTGGCTTGGCCAAAGTACAGCGCCTaGTACATAGAGAACTGCCAGCCATGCCAGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CKWRLAWPKYSA*YIENCQPCQSC Trigger: GCAGGACTGGCATGGCTGGCAGTTCTCTATGTAGCAGGCGCTGTACTTTGGCCAAGCCAATCTCCATTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000545239.2 |
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| CDS CAA 90 bp | GCCCAGGCTCTGTCACAGGCTGTGCTAACAAACCCAGCCTTGGTTTaGCTCACAGAACTGAAAGAGGCTGGGACATCATTAGGGAAACGG | + |
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Preference number: 6 (lower is better) Translates to: AQALSQAVLTNPALV*LTELKEAGTSLGKR Trigger: CCGTTTCCCTAATGATGTCCCAGCCTCTTTCAGTTCTGTGAGCAAAACCAAGGCTGGGTTTGTTAGCACAGCCTGTGACAGAGCCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS GCA 72 bp | GCCTGCTACATAGAGAACTGCCAGCCATGCCAGTCCTaGTCTCTCCTGTGCCTGAGTAGTGATTTAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: ACYIENCQPCQS*SLLCLSSDLGI Trigger: GATACCTAAATCACTACTCAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGTTCTCTATGTAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000545239.2 |
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| CDS GCA 72 bp | TTCATGGAGGTCCATACCTGCCAGCCATGCCAGTCCTaGTCTCTCCTGTGCCTGAGTAGTGATTTAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: FMEVHTCQPCQS*SLLCLSSDLGI Trigger: GATACCTAAATCACTACTCAGGCACAGGAGAGAGCAGGACTGGCATGGCTGGCAGGTATGGACCTCCATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667189.1 |
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| CDS CCA 72 bp | CCCAGCCTTGGTTTTGCTCACAGAACTGAAAGAGGCTaGGACATCATTAGGGAAACGGAGTCGAACAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PSLGFAHRTERG*DIIRETESNSP Trigger: AGGGCTGTTCGACTCCGTTTCCCTAATGATGTCCCAGCCTCTTTCAGTTCTGTGAGCAAAACCAAGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS CCA 72 bp | GGAGGAGACAGGAGAAAGACGCGCTTCCCGGAATCTTaGCTGCTTCTCACTTTAATCAAAGTCTCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GGDRRKTRFPES*LLLTLIKVSCC Trigger: GCAGCAGGAGACTTTGATTAAAGTGAGAAGCAGCCAAGATTCCGGGAAGCGCGTCTTTCTCCTGTCTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000667189.1 |
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| CDS CCA 72 bp | GGAGGAGACAGGAGAAAGACGCGCTTCCCGGAATCTTaGCTGCTTCTCACTTTAATCAAAGTCTCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GGDRRKTRFPES*LLLTLIKVSCW Trigger: CCAGCAGGAGACTTTGATTAAAGTGAGAAGCAGCCAAGATTCCGGGAAGCGCGTCTTTCTCCTGTCTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000545239.2 |
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| CDS CAA 72 bp | CAGGCTCTGTCACAGGCTGTGCTAACAAACCCAGCCTaGGTTTTGCTCACAGAACTGAAAGAGGCTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: QALSQAVLTNPA*VLLTELKEAGT Trigger: TGTCCCAGCCTCTTTCAGTTCTGTGAGCAAAACCAAGGCTGGGTTTGTTAGCACAGCCTGTGACAGAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS CAA 72 bp | GGGAGGAGACAGGAGAAAGACGCGCTTCCCGGAATCTaGGCTGCTTCTCACTTTAATCAAAGTCTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GRRQEKDALPGI*AASHFNQSLLL Trigger: CAGCAGGAGACTTTGATTAAAGTGAGAAGCAGCCAAGATTCCGGGAAGCGCGTCTTTCTCCTGTCTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000667189.1 |
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| CDS CAA 90 bp | AAGGCGGCGTGTCCGGAGTTTGTTCCTTCTGATGTTCAGATGTGTTaGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KAACPEFVPSDVQMC*EFLPSGGFVVSLAS Trigger: TGAAGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCAAACACATCTGAACATCAGAAGGAACAAACTCCGGACACGCCGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499291.6 |
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| CDS CAA 90 bp | CACATCTTGGGGAGGAGACAGGAGAAAGACGCGCTTCCCGGAATCTaGGCTGCTTCTCACTTTAATCAAAGTCTCCTGCTGCTGACACAC | + |
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Preference number: 6 (lower is better) Translates to: HILGRRQEKDALPGI*AASHFNQSLLLLTH Trigger: GTGTGTCAGCAGCAGGAGACTTTGATTAAAGTGAGAAGCAGCCAAGATTCCGGGAAGCGCGTCTTTCTCCTGTCTCCTCCCCAAGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000667189.1 |
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| CDS GCA 72 bp | AACGAAGAGCTTCTTAACCAAGCCCTCAGAACTAGCTaGCTTGATAAGGATCAGCTGGAGCCAGTCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: NEELLNQALRTS*LDKDQLEPVTA Trigger: GGCTGTGACTGGCTCCAGCTGATCCTTATCAAGGCAGCTAGTTCTGAGGGCTTGGTTAAGAAGCTCTTCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000665563.1 |
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| CDS CAA 72 bp | AAGAGCTTCTTAACCAAGCCCTCAGAACTAGCTGCCTaGATAAGGATCAGCTGGAGCCAGTCACAGCCTACG | + |
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Preference number: 6 (lower is better) Translates to: KSFLTKPSELAA*IRISWSQSQPT Trigger: CGTAGGCTGTGACTGGCTCCAGCTGATCCTTATCAAGGCAGCTAGTTCTGAGGGCTTGGTTAAGAAGCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000665563.1 |
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| CDS GCA 72 bp | GCAGGGACAAAGCTTTCTTCCCACCTGGAAGGAATCTaGGCTTTCCTCATGAGTCTTCTGTTCAAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: AGTKLSSHLEGI*AFLMSLLFKGQ Trigger: CTGTCCTTTGAACAGAAGACTCATGAGGAAAGCGCAGATTCCTTCCAGGTGGGAAGAAAGCTTTGTCCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS GCA 72 bp | CTTTCAGTTTTATTCTGGATAGGAATTGTCTCCCTGTaGCAGACAGGGCGAAGCTTCCCAGGTCTCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSVLFWIGIVSL*QTGRSFPGLLR Trigger: CCTCAAGAGACCTGGGAAGCTTCGCCCTGTCTGGCACAGGGAGACAATTCCTATCCAGAATAAAACTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS CCA 72 bp | GATCAGCTGGAGCCAGTCACAGCCTACGCTAGTTTGTaGGCAAGAAGAAAAGCACTTAAAGCAAACTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: DQLEPVTAYASL*ARRKALKANSH Trigger: GTGGGAGTTTGCTTTAAGTGCTTTTCTTCTTGCCCACAAACTAGCGTAGGCTGTGACTGGCTCCAGCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000665563.1 |
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| CDS CAA 72 bp | AAGAAGTCCCATGGGAATCAGTCCAAGGCTGATACATaGACTCCAAGTATCCCCAGTGTCCCAGGCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: KKSHGNQSKADT*TPSIPSVPGSV Trigger: TACAGAGCCTGGGACACTGGGGATACTTGGAGTCAATGTATCAGCCTTGGACTGATTCCCATGGGACTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000667189.1 |
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| CDS TCA 72 bp | TTTCTTCCCACCTGGAAGGAATCTGCGCTTTCCTCATaGGTCTTCTGTTCAAAGGACAGTACCCCCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FLPTWKESALSS*VFCSKDSTPSL Trigger: CAAACTGGGGGTACTGTCCTTTGAACAGAAGACTCATGAGGAAAGCGCAGATTCCTTCCAGGTGGGAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS CAA 72 bp | TGTCCGGAGTTTGTTCCTTCTGATGTTCAGATGTGTTaGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: CPEFVPSDVQMC*EFLPSGGFVVS Trigger: CGAGACCACGAACCCACCAGAAGGAAGAAACTCCAAACACATCTGAACATCAGAAGGAACAAACTCCGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499291.6 |
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| CDS CAA 72 bp | CTGTCACAGGCTGTGCTAACAAACCCAGCCTTGGTTTaGCTCACAGAACTGAAAGAGGCTGGGACATCATTA | + |
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Preference number: 6 (lower is better) Translates to: LSQAVLTNPALV*LTELKEAGTSL Trigger: TAATGATGTCCCAGCCTCTTTCAGTTCTGTGAGCAAAACCAAGGCTGGGTTTGTTAGCACAGCCTGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS CAA 90 bp | GGTGAGTTTCAGCCTAAGTTCCTAGGCAAGCTTACTTTCCCTGGTTaGAGTTGGGGAGGATGGCGTTACTCTTTAGTAATTTTGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GEFQPKFLGKLTFPG*SWGGWRYSLVILLP Trigger: GGGCAACAAAATTACTAAAGAGTAACGCCATCCTCCCCAACTCAAACCAGGGAAAGTAAGCTTGCCTAGGAACTTAGGCTGAAACTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS TCA 72 bp | GTTCTTAAAGGCGGCGTGTCCGGAGTTTGTTCCTTCTaGTGTTCAGATGTGTTTGGAGTTTCTTCCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VLKGGVSGVCSF*CSDVFGVSSFW Trigger: CCAGAAGGAAGAAACTCCAAACACATCTGAACATCAGAAGGAACAAACTCCGGACACGCCGCCTTTAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000499291.6 |
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| CDS CAA 72 bp | GAGTCAAGTAAGGGAGAAACATGTTGCAAATGGAGATaGGCTTGGCCAAAGTACAGCGCCTGCTACATAGAG | + |
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Preference number: 6 (lower is better) Translates to: ESSKGETCCKWR*AWPKYSACYIE Trigger: CTCTATGTAGCAGGCGCTGTACTTTGGCCAAGCCAATCTCCATTTGCAACATGTTTCTCCCTTACTTGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000667189.1 |
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| CDS CAA 72 bp | CAGCCTAAGTTCCTAGGCAAGCTTACTTTCCCTGGTTaGAGTTGGGGAGGATGGCGTTACTCTTTAGTAATT | + |
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Preference number: 6 (lower is better) Translates to: QPKFLGKLTFPG*SWGGWRYSLVI Trigger: AATTACTAAAGAGTAACGCCATCCTCCCCAACTCAAACCAGGGAAAGTAAGCTTGCCTAGGAACTTAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000665563.1 |
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| CDS GCA 72 bp | TGCAAATGGAGATTGGCTTGGCCAAAGTACAGCGCCTaGTACATAGAGAACTGGAAGATTAACTTTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: CKWRLAWPKYSA*YIENWKINFVT Trigger: AGTCACAAAGTTAATCTTCCAGTTCTCTATGTAGCAGGCGCTGTACTTTGGCCAAGCCAATCTCCATTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667189.1 |
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| CDS CCA 72 bp | AGTGGCTTAACAGATGAAAGGAAGGACTGTTTCACTTaGGTAATAAGAAGTCCCATGGGAATCAGTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SGLTDERKDCFT*VIRSPMGISPR Trigger: CCTTGGACTGATTCCCATGGGACTTCTTATTACCCAAGTGAAACAGTCCTTCCTTTCATCTGTTAAGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000667189.1 |
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| CDS CCA 72 bp | AAGTTCCTAGGCAAGCTTACTTTCCCTGGTTTGAGTTaGGGAGGATGGCGTTACTCTTTAGTAATTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KFLGKLTFPGLS*GGWRYSLVILL Trigger: CAACAAAATTACTAAAGAGTAACGCCATCCTCCCCAACTCAAACCAGGGAAAGTAAGCTTGCCTAGGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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| CDS CCA 72 bp | AGAAGAAAAGCACTTAAAGCAAACTCCCACCCTATGTaGCTCAGTGGATTCACTATCTGCACTACCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: RRKALKANSHPM*LSGFTICTTSF Trigger: AAAAGAGGTAGTGCAGATAGTGAATCCACTGAGCCACATAGGGTGGGAGTTTGCTTTAAGTGCTTTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499291.6 ENST00000545239.2 ENST00000665563.1 |
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| CDS TCA 72 bp | AGTAAATTTCGACCTATTTTACACCAAAGAGGCAACTaGCACAATCAAGATAATGAACATGGCTGGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SKFRPILHQRGN*HNQDNEHGWAR Trigger: CCTTGCCCAGCCATGTTCATTATCTTGATTGTGTCAGTTGCCTCTTTGGTGTAAAATAGGTCGAAATTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665563.1 |
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| CDS TCA 72 bp | CCCTTTCTTGTGTTGCTATTTGTCAGTGCCTGTATATaGTTTTTCCTTCATTTGCTAGGGATTAGGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PFLVLLFVSACI*FFLHLLGIREV Trigger: AACTTCCCTAATCCCTAGCAAATGAAGGAAAAATCATATACAGGCACTGACAAATAGCAACACAAGAAAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499291.6 ENST00000665563.1 |
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