Pregenerated sensors for LINC01248 (Homo sapiens)
Ensembl gene IDs: ENSG00000224128Ensembl transcript IDs: ENST00000458264.1
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | CCCAGAAGGCTTCTAGCTCACAATCGCACGATTTCAGGACGAGGCTaGCGGAGAAGCGCTGGCGACCGAGGATGGGGGAAGGACAAAGAG | + |
Preference number: 5 (lower is better) Translates to: PRRLLAHNRTISGRG*RRSAGDRGWGKDKE Trigger: CTCTTTGTCCTTCCCCCATCCTCGGTCGCCAGCGCTTCTCCGGCAGCCTCGTCCTGAAATCGTGCGATTGTGAGCTAGAAGCCTTCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000458264.1 |
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CDS GCA 72 bp | CTTCTAGCTCACAATCGCACGATTTCAGGACGAGGCTaGCGGAGAAGCGCTGGCGACCGAGGATGGGGGAAG | + |
Preference number: 6 (lower is better) Translates to: LLAHNRTISGRG*RRSAGDRGWGK Trigger: CTTCCCCCATCCTCGGTCGCCAGCGCTTCTCCGGCAGCCTCGTCCTGAAATCGTGCGATTGTGAGCTAGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000458264.1 |
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CDS CCA 72 bp | TCGCACGATTTCAGGACGAGGCTGCCGGAGAAGCGCTaGCGACCGAGGATGGGGGAAGGACAAAGAGGAAGA | + |
Preference number: 6 (lower is better) Translates to: SHDFRTRLPEKR*RPRMGEGQRGR Trigger: TCTTCCTCTTTGTCCTTCCCCCATCCTCGGTCGCCAGCGCTTCTCCGGCAGCCTCGTCCTGAAATCGTGCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000458264.1 |