Pregenerated sensors for LINC01241 (Homo sapiens)
Ensembl gene IDs: ENSG00000236306Ensembl transcript IDs: ENST00000423326.2, ENST00000627303.1, ENST00000654259.1, ENST00000655503.1, ENST00000663468.1, ENST00000665756.1, ENST00000668254.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATAGCTAGCAGCCACAGTGTCCAAGGCAGTTTTCCATTAAAATCATaGCTATCCAAGGTTCTTCGGGTACAATGGCAGGAGCAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: IASSHSVQGSFPLKS*LSKVLRVQWQEQQQ Trigger: CTGCTGCTGCTCCTGCCATTGTACCCGAAGAACCTTGGATAGCCATGATTTTAATGGAAAACTGCCTTGGACACTGTGGCTGCTAGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663468.1 |
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| CDS TCA 90 bp | CCCTGGTTTAAGTCACCCAGTCTGCGACATCTTGTTGTAGAAGGCTaGGCAGACTATTACAGAAACATATCCACGTTGGCCCATGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PWFKSPSLRHLVVEG*ADYYRNISTLAHGK Trigger: TTTCCCATGGGCCAACGTGGATATGTTTCTGTAATAGTCTGCTCAGCCTTCTACAACAAGATGTCGCAGACTGGGTGACTTAAACCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS TCA 90 bp | CCTTCCCCCATACTTCTTCCCATGGCTCTGAAGTGCTTGGTTCAATaGAGGTTAGCCTACTTTAGTTTGGGACCACATCAATCAGGTACT | + |
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Preference number: 5 (lower is better) Translates to: PSPILLPMALKCLVQ*RLAYFSLGPHQSGT Trigger: AGTACCTGATTGATGTGGTCCCAAACTAAAGTAGGCTAACCTTCATTGAACCAAGCACTTCAGAGCCATGGGAAGAAGTATGGGGGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 ENST00000668254.1 |
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| CDS GCA 90 bp | TGTGTGGCAGTCTCCTCTCTGGTATTACATTCCACAGTTTCCAGCTaGTTCAGCCTAACCAAATTCTGCTCTCAGGCTCTAACTGAATGT | + |
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Preference number: 5 (lower is better) Translates to: CVAVSSLVLHSTVSS*FSLTKFCSQALTEC Trigger: ACATTCAGTTAGAGCCTGAGAGCAGAATTTGGTTAGGCTGAAGCAGCTGGAAACTGTGGAATGTAATACCAGAGAGGAGACTGCCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS TCA 90 bp | GAAGTTACAGTCACACTATCAGTTGGAGCCACAGTCCATAAGATTTaGCCAGGACTAGATGAGCCACTTCTAGGTTCACTCATGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: EVTVTLSVGATVHKI*PGLDEPLLGSLMRL Trigger: CAACCTCATGAGTGAACCTAGAAGTGGCTCATCTAGTCCTGGTCAAATCTTATGGACTGTGGCTCCAACTGATAGTGTGACTGTAACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423326.2 ENST00000627303.1 ENST00000654259.1 |
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| CDS CCA 90 bp | ACTTCTTTGTTCCATGGCCCTTTCCATAGGACTGTTTTCTTAATATaGCAGCTGGTTTCCCCTAGAATGAGCAGAGAATCCAGGCATTGG | + |
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Preference number: 5 (lower is better) Translates to: TSLFHGPFHRTVFLI*QLVSPRMSRESRHW Trigger: CCAATGCCTGGATTCTCTGCTCATTCTAGGGGAAACCAGCTGCCATATTAAGAAAACAGTCCTATGGAAAGGGCCATGGAACAAAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627303.1 |
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| CDS CCA 90 bp | ATATGGCAGCTGGTTTCCCCTAGAATGAGCAGAGAATCCAGGCATTaGTCAGCATTTCTAGTGGAAGTGTTTGGTTTATGTTTATGGCAA | + |
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Preference number: 5 (lower is better) Translates to: IWQLVSPRMSRESRH*SAFLVEVFGLCLWQ Trigger: TTGCCATAAACATAAACCAAACACTTCCACTAGAAATGCTGACCAATGCCTGGATTCTCTGCTCATTCTAGGGGAAACCAGCTGCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627303.1 |
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| CDS CCA 90 bp | CACTCTTCTTATCATGAGTACCTTCTTGAAGATACCAGCTTCCCTTaGACATTGTCTCATTTCATCAGAGATATTCATACTCCTGCTACG | + |
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Preference number: 5 (lower is better) Translates to: HSSYHEYLLEDTSFP*TLSHFIRDIHTPAT Trigger: CGTAGCAGGAGTATGAATATCTCTGATGAAATGAGACAATGTCCAAGGGAAGCTGGTATCTTCAAGAAGGTACTCATGATAAGAAGAGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665756.1 |
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| CDS CCA 90 bp | CTAGTCTGTGTTGACCTCTTTGAGTTCTGTGCTGTTATTCCTGATTaGAAAGGTCCTCGGATGCCTTGTAAACATTGTATTCTTGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: LVCVDLFEFCAVIPD*KGPRMPCKHCILVL Trigger: TAACACAAGAATACAATGTTTACAAGGCATCCGAGGACCTTTCCAATCAGGAATAACAGCACAGAACTCAAAGAGGTCAACACAGACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668254.1 |
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| CDS CCA 90 bp | AGGCATTGGTCAGCATTTCTAGTGGAAGTGTTTGGTTTATGTTTATaGCAAAGAATTATCCTAGAATGTAAGCTTCATAAGAGCGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RHWSAFLVEVFGLCL*QRIILECKLHKSVA Trigger: AGCCACGCTCTTATGAAGCTTACATTCTAGGATAATTCTTTGCCATAAACATAAACCAAACACTTCCACTAGAAATGCTGACCAATGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627303.1 |
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| CDS GCA 72 bp | CTTCAGTTTCCCCTCCTTGCACTGGAGACTGGAAATTaGCACCATGAAGAAAGCTCGCTCGCTCTGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: LQFPLLALETGN*HHEESSLALMK Trigger: TTTCATCAGAGCGAGCGAGCTTTCTTCATGGTGGCAATTTCCAGTCTCCAGTGCAAGGAGGGGAAACTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS CAA 72 bp | GGACTAGATGAGCCACTTCTAGGTTCACTCATGAGGTaGTTGGCAGAAGTCACTTCTTTGTTCCATGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GLDEPLLGSLMR*LAEVTSLFHGP Trigger: AGGGCCATGGAACAAAGAAGTGACTTCTGCCAACAACCTCATGAGTGAACCTAGAAGTGGCTCATCTAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423326.2 ENST00000627303.1 ENST00000654259.1 |
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| CDS TCA 72 bp | AAGTCACCCAGTCTGCGACATCTTGTTGTAGAAGGCTaGGCAGACTATTACAGAAACATATCCACGTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: KSPSLRHLVVEG*ADYYRNISTLA Trigger: GGCCAACGTGGATATGTTTCTGTAATAGTCTGCTCAGCCTTCTACAACAAGATGTCGCAGACTGGGTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS GCA 72 bp | GTCTCCTCTCTGGTATTACATTCCACAGTTTCCAGCTaGTTCAGCCTAACCAAATTCTGCTCTCAGGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: VSSLVLHSTVSS*FSLTKFCSQAL Trigger: TAGAGCCTGAGAGCAGAATTTGGTTAGGCTGAAGCAGCTGGAAACTGTGGAATGTAATACCAGAGAGGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS CCA 72 bp | TTCCATGGCCCTTTCCATAGGACTGTTTTCTTAATATaGCAGCTGGTTTCCCCTAGAATGAGCTCCTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: FHGPFHRTVFLI*QLVSPRMSSCY Trigger: GTAGCAGGAGCTCATTCTAGGGGAAACCAGCTGCCATATTAAGAAAACAGTCCTATGGAAAGGGCCATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423326.2 |
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| CDS CAA 72 bp | CTAGATGAGCCACTTCTAGGTTCACTCATGAGGTTGTaGGCAGAAGTCACTTCTTTGTTCCATGGCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LDEPLLGSLMRL*AEVTSLFHGPF Trigger: GAAAGGGCCATGGAACAAAGAAGTGACTTCTGCCAACAACCTCATGAGTGAACCTAGAAGTGGCTCATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423326.2 ENST00000627303.1 ENST00000654259.1 |
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| CDS CAA 90 bp | CTGGAAGGTTTCTCACTCAGGAAACTTATCCAAATTCCCCCTCTATaGTCCTCAAAAGGATCGTCCATCCATGGATCTGTGACTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: LEGFSLRKLIQIPPL*SSKGSSIHGSVTLT Trigger: AGTGAGAGTCACAGATCCATGGATGGACGATCCTTTTGAGGACAATAGAGGGGGAATTTGGATAAGTTTCCTGAGTGAGAAACCTTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 ENST00000668254.1 |
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| CDS GCA 72 bp | TCCACAGTTTCCAGCTGCTTCAGCCTAACCAAATTCTaGTCTCAGGCTCTAACTGAATGTAACCGCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: STVSSCFSLTKF*SQALTECNRLI Trigger: AATAAGGCGGTTACATTCAGTTAGAGCCTGAGAGCAGAATTTGGTTAGGCTGAAGCAGCTGGAAACTGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS CCA 72 bp | TTCCATGGCCCTTTCCATAGGACTGTTTTCTTAATATaGCAGCTGGTTTCCCCTAGAATGAGCAGAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: FHGPFHRTVFLI*QLVSPRMSRES Trigger: GGATTCTCTGCTCATTCTAGGGGAAACCAGCTGCCATATTAAGAAAACAGTCCTATGGAAAGGGCCATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627303.1 |
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| CDS CAA 90 bp | CCACTTCTAGGTTCACTCATGAGGTTGTTGGCAGAAGTCACTTCTTaGTTCCATGGCCCTTTCCATAGGACTGTTTTCTTAATATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PLLGSLMRLLAEVTS*FHGPFHRTVFLIWQ Trigger: CTGCCATATTAAGAAAACAGTCCTATGGAAAGGGCCATGGAACAAAGAAGTGACTTCTGCCAACAACCTCATGAGTGAACCTAGAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423326.2 ENST00000627303.1 ENST00000654259.1 |
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| CDS CCA 72 bp | AGCAGACTATTACAGAAACATATCCACGTTGGCCCATaGGAAAACTTTCCCTTTTGCCTTCTGAAGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SRLLQKHIHVGP*ENFPFCLLKVC Trigger: GCAAACCTTCAGAAGGCAAAAGGGAAAGTTTTCCCATGGGCCAACGTGGATATGTTTCTGTAATAGTCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS CCA 72 bp | AAGGCTGAGCAGACTATTACAGAAACATATCCACGTTaGCCCATGGGAAAACTTTCCCTTTTGCCTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: KAEQTITETYPR*PMGKLSLLPSE Trigger: TTCAGAAGGCAAAAGGGAAAGTTTTCCCATGGGCCAACGTGGATATGTTTCTGTAATAGTCTGCTCAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 |
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| CDS CCA 72 bp | CTGGTTTCCCCTAGAATGAGCAGAGAATCCAGGCATTaGTCAGCATTTCTAGTGGAAGTGTTTGGTTTATGT | + |
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Preference number: 6 (lower is better) Translates to: LVSPRMSRESRH*SAFLVEVFGLC Trigger: ACATAAACCAAACACTTCCACTAGAAATGCTGACCAATGCCTGGATTCTCTGCTCATTCTAGGGGAAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627303.1 |
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| CDS CCA 72 bp | TTCCATGGCCCTTTCCATAGGACTGTTTTCTTAATATaGCAGCTGGTTTCCCCTAGAATGAGCCTTTCTAAG | + |
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Preference number: 6 (lower is better) Translates to: FHGPFHRTVFLI*QLVSPRMSLSK Trigger: CTTAGAAAGGCTCATTCTAGGGGAAACCAGCTGCCATATTAAGAAAACAGTCCTATGGAAAGGGCCATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654259.1 |
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| CDS CAA 72 bp | TTCTCACTCAGGAAACTTATCCAAATTCCCCCTCTATaGTCCTCAAAAGGATCGTCCATCCATGGATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FSLRKLIQIPPL*SSKGSSIHGSV Trigger: CACAGATCCATGGATGGACGATCCTTTTGAGGACAATAGAGGGGGAATTTGGATAAGTTTCCTGAGTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 ENST00000668254.1 |
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| CDS CAA 72 bp | GGTTCACTCATGAGGTTGTTGGCAGAAGTCACTTCTTaGTTCCATGGCCCTTTCCATAGGACTGTTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: GSLMRLLAEVTS*FHGPFHRTVFL Trigger: TAAGAAAACAGTCCTATGGAAAGGGCCATGGAACAAAGAAGTGACTTCTGCCAACAACCTCATGAGTGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423326.2 ENST00000627303.1 ENST00000654259.1 |
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| CDS CAA 72 bp | GTGTGCGTCCTCACTCTTCTTATCATGAGTACCTTCTaGAAGATACCAGCTTCCCTTGGACATTGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: VCVLTLLIMSTF*KIPASLGHCLI Trigger: AATGAGACAATGTCCAAGGGAAGCTGGTATCTTCAAGAAGGTACTCATGATAAGAAGAGTGAGGACGCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665756.1 |
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| CDS CAA 90 bp | AAGTTAAAGGTGTGCGTCCTCACTCTTCTTATCATGAGTACCTTCTaGAAGATACCAGCTTCCCTTGGACATTGTCTCATTTCATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: KLKVCVLTLLIMSTF*KIPASLGHCLISSE Trigger: CTCTGATGAAATGAGACAATGTCCAAGGGAAGCTGGTATCTTCAAGAAGGTACTCATGATAAGAAGAGTGAGGACGCACACCTTTAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665756.1 |
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| CDS TCA 72 bp | TATTGTCCTCAAAAGGATCGTCCATCCATGGATCTGTaGCTCTCACTGTGTCTTGCACTGTTAATGTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: YCPQKDRPSMDL*LSLCLALLMFV Trigger: AACAAACATTAACAGTGCAAGACACAGTGAGAGTCACAGATCCATGGATGGACGATCCTTTTGAGGACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 ENST00000668254.1 |
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| CDS CCA 72 bp | GTTGACCTCTTTGAGTTCTGTGCTGTTATTCCTGATTaGAAAGGTCCTCGGATGCCTTGTAAACATTGTATT | + |
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Preference number: 6 (lower is better) Translates to: VDLFEFCAVIPD*KGPRMPCKHCI Trigger: AATACAATGTTTACAAGGCATCCGAGGACCTTTCCAATCAGGAATAACAGCACAGAACTCAAAGAGGTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668254.1 |
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| CDS CAA 72 bp | GCTCTGTGTTTTGAGAAGGAACAGCTAACTTTCAGATaGCCATCTGGAAGGTTTCTCACTCAGGAAACTTAT | + |
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Preference number: 6 (lower is better) Translates to: ALCFEKEQLTFR*PSGRFLTQETY Trigger: ATAAGTTTCCTGAGTGAGAAACCTTCCAGATGGCAATCTGAAAGTTAGCTGTTCCTTCTCAAAACACAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 ENST00000668254.1 |
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| CDS CAA 90 bp | CTTGAGAAAGCTCTGTGTTTTGAGAAGGAACAGCTAACTTTCAGATaGCCATCTGGAAGGTTTCTCACTCAGGAAACTTATCCAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: LEKALCFEKEQLTFR*PSGRFLTQETYPNS Trigger: GGAATTTGGATAAGTTTCCTGAGTGAGAAACCTTCCAGATGGCAATCTGAAAGTTAGCTGTTCCTTCTCAAAACACAGAGCTTTCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000423326.2 ENST00000654259.1 ENST00000655503.1 ENST00000663468.1 ENST00000665756.1 ENST00000668254.1 |
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| CDS CAA 90 bp | TGGCAAAGAATTATCCTAGAATGTAAGCTTCATAAGAGCGTGGCTTaGTCCTTCTATCCCACTATGTCACCAGATCCTAATACAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WQRIILECKLHKSVA*SFYPTMSPDPNTVS Trigger: AGACACTGTATTAGGATCTGGTGACATAGTGGGATAGAAGGACAAAGCCACGCTCTTATGAAGCTTACATTCTAGGATAATTCTTTGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627303.1 |
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| CDS CAA 72 bp | ATTATCCTAGAATGTAAGCTTCATAAGAGCGTGGCTTaGTCCTTCTATCCCACTATGTCACCAGATCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: IILECKLHKSVA*SFYPTMSPDPN Trigger: ATTAGGATCTGGTGACATAGTGGGATAGAAGGACAAAGCCACGCTCTTATGAAGCTTACATTCTAGGATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627303.1 |
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| CDS CAA 90 bp | TCTGTAAAGAAGGTGAGAAAATATAACTACCAAAGGAGTGTTATATaGTTGTTATTCCAAATATGGACTCCTGCTACGTGGCCTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: SVKKVRKYNYQRSVI*LLFQIWTPATWPDS Trigger: GGAATCAGGCCACGTAGCAGGAGTCCATATTTGGAATAACAACAATATAACACTCCTTTGGTAGTTATATTTTCTCACCTTCTTTACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654259.1 ENST00000655503.1 |
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| CDS CCA 72 bp | TATCATGAGTACCTTCTTGAAGATACCAGCTTCCCTTaGACATTGTCTCATTTCATCAGAGATATTCATACT | + |
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Preference number: 6 (lower is better) Translates to: YHEYLLEDTSFP*TLSHFIRDIHT Trigger: AGTATGAATATCTCTGATGAAATGAGACAATGTCCAAGGGAAGCTGGTATCTTCAAGAAGGTACTCATGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665756.1 |
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| CDS CAA 72 bp | GTGAGAAAATATAACTACCAAAGGAGTGTTATATTGTaGTTATTCCAAATATGGACTCCTGCTACGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VRKYNYQRSVIL*LFQIWTPATWP Trigger: AGGCCACGTAGCAGGAGTCCATATTTGGAATAACAACAATATAACACTCCTTTGGTAGTTATATTTTCTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654259.1 ENST00000655503.1 |
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| CDS CAA 90 bp | AGGATGTTTTGCCTCAACTGCAAAACATCAGGTATTTCTACTATGTaGTGTAAGCAAACAAACAAACAACAACAACAACAAACTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RMFCLNCKTSGISTM*CKQTNKQQQQQTPC Trigger: GCAAGGAGTTTGTTGTTGTTGTTGTTTGTTTGTTTGCTTACACAACATAGTAGAAATACCTGATGTTTTGCAGTTGAGGCAAAACATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668254.1 |
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| CDS CAA 72 bp | TGCCTCAACTGCAAAACATCAGGTATTTCTACTATGTaGTGTAAGCAAACAAACAAACAACAACAACAACAA | + |
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Preference number: 6 (lower is better) Translates to: CLNCKTSGISTM*CKQTNKQQQQQ Trigger: TTGTTGTTGTTGTTGTTTGTTTGTTTGCTTACACAACATAGTAGAAATACCTGATGTTTTGCAGTTGAGGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668254.1 |
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| CDS CAA 72 bp | CCTTGTAAACATTGTATTCTTGTGTTAGAGGATGTTTaGCCTCAACTGCAAAACATCAGGTATTTCTACTAT | + |
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Preference number: 6 (lower is better) Translates to: PCKHCILVLEDV*PQLQNIRYFYY Trigger: ATAGTAGAAATACCTGATGTTTTGCAGTTGAGGCAAAACATCCTCTAACACAAGAATACAATGTTTACAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668254.1 |
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