Pregenerated sensors for LINC01238 (Homo sapiens)
Ensembl gene IDs: ENSG00000237940, ENSG00000261186Ensembl transcript IDs: ENST00000416204.1, ENST00000426962.1, ENST00000429456.1, ENST00000451070.1, ENST00000567549.2, ENST00000626751.1, ENST00000629169.1, ENST00000631041.1, ENST00000631095.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCACAGACCAGAGAAGCCGAGGACACAGGAGGATCAGACACGACGTaGCACCCCAGGTGGGGTCACAGCAGAGAGAGGACATGGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: SQTREAEDTGGSDTT*HPRWGHSRERTWME Trigger: TTCCATCCATGTCCTCTCTCTGCTGTGACCCCACCTGGGGTGCCACGTCGTGTCTGATCCTCCTGTGTCCTCGGCTTCTCTGGTCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 90 bp | GACAGTTCCACATGGCTGGGGTGGCCTCACAATCATGGCGGAAGGTaGAGGAGGAGCAGAGGCAGGTCTTACATGGTGGCAGGCAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: DSSTWLGWPHNHGGR*RRSRGRSYMVAGKR Trigger: TCTCTTGCCTGCCACCATGTAAGACCTGCCTCTGCTCCTCCTTCACCTTCCGCCATGATTGTGAGGCCACCCCAGCCATGTGGAACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 90 bp | TGCGGAAGCCCACCACCTCAGGCTAACCATGAGGAAAAGGACAGATaGACCCAGACTGAGGGGCATCCACAGGGTGCCCAACAGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: CGSPPPQANHEEKDR*TQTEGHPQGAQQSP Trigger: AGGAGACTGTTGGGCACCCTGTGGATGCCCCTCAGTCTGGGTTCATCTGTCCTTTTCCTCATGGTTAGCCTGAGGTGGTGGGCTTCCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 90 bp | TCCAGTTCCACATGGCTGGGGTGGCCTCACAATCATGGCGGAAGGTaGAGGAGGAGCAGAGGCAGGTCTTACATGGTGGCAGGCAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SSSTWLGWPHNHGGR*RRSRGRSYMVAGKR Trigger: TCTCTTGCCTGCCACCATGTAAGACCTGCCTCTGCTCCTCCTTCACCTTCCGCCATGATTGTGAGGCCACCCCAGCCATGTGGAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS TCA 90 bp | ACAGCCCTGGGATTCTTCCAGATTCAGTCAAGTGCATCCTCATGGTaGTGTGTGGCCAGCAGGCGTCCAGTTCCACATGGCTGGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: TALGFFQIQSSASSW*CVASRRPVPHGWGG Trigger: GCCACCCCAGCCATGTGGAACTGGACGCCTGCTGGCCACACATCACCATGAGGATGCACTTGACTGAATCTGGAAGAATCCCAGGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS GCA 90 bp | CAAGGTTGTGGCCAATCCTGTGTCTGGCAAGGCTGCTTCCTGGTTTaGAGACACCATCTTCCTCCCTTCAGCCCACAGCAGTGCCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QGCGQSCVWQGCFLV*RHHLPPFSPQQCPW Trigger: CCAAGGGCACTGCTGTGGGCTGAAGGGAGGAAGATGGTGTCTGCAAACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | ATCATGGCGGAAGGTGAAGGAGGAGCAGAGGCAGGTCTTACATGGTaGCAGGCAAGAGAGCCTGTGCAGGGAAATTCCTTCCCAGGCCAC | + |
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Preference number: 5 (lower is better) Translates to: IMAEGEGGAEAGLTW*QAREPVQGNSFPGH Trigger: GTGGCCTGGGAAGGAATTTCCCTGCACAGGCTCTCTTGCCTGCCACCATGTAAGACCTGCCTCTGCTCCTCCTTCACCTTCCGCCATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 90 bp | GAAGTCTGGGGTCAAGGTTGTGGCCAATCCTGTGTCTGGCAAGGCTaGTTCCTGGTTTGCAGACACCATCTTCCTCCCTTCAGCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: EVWGQGCGQSCVWQG*FLVCRHHLPPFSPQ Trigger: CTGTGGGCTGAAGGGAGGAAGATGGTGTCTGCAAACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | TGGAGGCTGGAAGTCTGGGGTCAAGGTTGTGGCCAATCCTGTGTCTaGCAAGGCTGCTTCCTGGTTTGCAGACACCATCTTCCTCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: WRLEVWGQGCGQSCV*QGCFLVCRHHLPPF Trigger: GAAGGGAGGAAGATGGTGTCTGCAAACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | GCATCCACAGGGTGCCCAACAGTCTCCTCCACACTGCCAGGGTCATaGCAAAGGAGAGACAGAAATGTCACAGACCAGAGAAGCCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: ASTGCPTVSSTLPGS*QRRDRNVTDQRSRG Trigger: TCCTCGGCTTCTCTGGTCTGTGACATTTCTGTCTCTCCTTTGCCATGACCCTGGCAGTGTGGAGGAGACTGTTGGGCACCCTGTGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | GTTCGGCAGGCACTCCTGGTCTTCCTTTATCTTCTTGCAGAAAGATaGCCCGGCAGGTCCGTCCAAACACAAAGACTGGACGCAGAGACC | + |
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Preference number: 5 (lower is better) Translates to: VRQALLVFLYLLAER*PGRSVQTQRLDAET Trigger: GGTCTCTGCGTCCAGTCTTTGTGTTTGGACGGACCTGCCGGGCCATCTTTCTGCAAGAAGATAAAGGAAGACCAGGAGTGCCTGCCGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | CTCAGTCCTTCAGTTCTGGAGGCTGGAAGTCTGGGGTCAAGGTTGTaGCCAATCCTGTGTCTGGCAAGGCTGCTTCCTGGTTTGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: LSPSVLEAGSLGSRL*PILCLARLLPGLQT Trigger: TGTCTGCAAACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGAAGGACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | CCCTCCCCTGAAGGTAGCACAGGCTTCGTGACTCATCCCAAAGAGTaGAGCGGTGGAAGGGAAGACAGTGACTTTACAGCGAAGACACCT | + |
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Preference number: 5 (lower is better) Translates to: PSPEGSTGFVTHPKE*SGGREDSDFTAKTP Trigger: AGGTGTCTTCGCTGTAAAGTCACTGTCTTCCCTTCCACCGCTCCACTCTTTGGGATGAGTCACGAAGCCTGTGCTACCTTCAGGGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | ACGCTGAAAATGAACTCAGTCCTTCAGTTCTGGAGGCTGGAAGTCTaGGGTCAAGGTTGTGGCCAATCCTGTGTCTGGCAAGGCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TLKMNSVLQFWRLEV*GQGCGQSCVWQGCF Trigger: GAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGAAGGACTGAGTTCATTTTCAGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 90 bp | CTTACCCTGAATGGGGTTTCTGTGTGCAGGAACTGGGTTTGCTTCTaGGGTACTGAAGCCCTCAGCCTAGTGCCTCCCGATGCGTTATTT | + |
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Preference number: 5 (lower is better) Translates to: LTLNGVSVCRNWVCF*GTEALSLVPPDALF Trigger: AAATAACGCATCGGGAGGCACTAGGCTGAGGGCTTCAGTACCTCAGAAGCAAACCCAGTTCCTGCACACAGAAACCCCATTCAGGGTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | TTATTTCTCACAGTTCTGGAGGCTGGAAGTCTGGGGTCAAGGTTGTaGCCAATCCTGTGTCTGGCAAGGCTGCTTCCTGGTTTGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: LFLTVLEAGSLGSRL*PILCLARLLPGLQT Trigger: TGTCTGCAAACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGTGAGAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416204.1 ENST00000426962.1 |
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| CDS CCA 90 bp | TGCCCTGTGCCCCTAGTCAATATGGACATTTATTTCTCACAGTTCTaGAGGCTGGAAGTCTGGGGTCAAGGTTGTGGCCAATCCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: CPVPLVNMDIYFSQF*RLEVWGQGCGQSCV Trigger: GACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGTGAGAAATAAATGTCCATATTGACTAGGGGCACAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000416204.1 ENST00000426962.1 |
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| CDS GCA 90 bp | GAGGAGCAGAGGCAGGTCTTACATGGTGGCAGGCAAGAGAGCCTGTaGAGGGAAATTCCTGTTTATAAAACCATCAGAATCTCTTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: EEQRQVLHGGRQESL*REIPVYKTIRISWD Trigger: GTCCCAAGAGATTCTGATGGTTTTATAAACAGGAATTTCCCTGCACAGGCTCTCTTGCCTGCCACCATGTAAGACCTGCCTCTGCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CCA 90 bp | GTCAATATGGACATTTATTTCTCACAGTTCTGGAGGCTGGAAGTCTaGGGTCAAGGTTGTGGCCAATCCTGTGTCTGGCAAGGCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: VNMDIYFSQFWRLEV*GQGCGQSCVWQGCF Trigger: GAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGTGAGAAATAAATGTCCATATTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416204.1 ENST00000426962.1 |
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| CDS CCA 90 bp | ATCAGCATCTTTCTGGGTGTCACAACTGCCTATGGAGCAGTTTGGTaGAACAAGCAGGCCTTGGTAACACAGGATATTTCAGAGACCATG | + |
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Preference number: 5 (lower is better) Translates to: ISIFLGVTTAYGAVW*NKQALVTQDISETM Trigger: CATGGTCTCTGAAATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAAGATGCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CCA 90 bp | CATATCAGCATCTTTCTGGGTGTCACAACTGCCTATGGAGCAGTTTaGTGGAACAAGCAGGCCTTGGTAACACAGGATATTTCAGAGACC | + |
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Preference number: 5 (lower is better) Translates to: HISIFLGVTTAYGAV*WNKQALVTQDISET Trigger: GGTCTCTGAAATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAAGATGCTGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS TCA 90 bp | CATCAGTGTTCTTGGAAGGAAGAACAGAAAAAGGATGGATTGAAGTaGAACAGCAGTCACACGGCCTCTGCTTTGAGGTTAGCTGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HQCSWKEEQKKDGLK*NSSHTASALRLAGS Trigger: ACTGCCAGCTAACCTCAAAGCAGAGGCCGTGTGACTGCTGTTTCACTTCAATCCATCCTTTTTCTGTTCTTCCTTCCAAGAACACTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 90 bp | TCTTTAGGATCTTTCTGCTGCATTTTATTGCAGCCCACCATGCATTaGAACTGTCTCAGGACTCTTCAAACATTTGACTATGGCCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLGSFCCILLQPTMH*NCLRTLQTFDYGPG Trigger: ACCAGGGCCATAGTCAAATGTTTGAAGAGTCCTGAGACAGTTGCAATGCATGGTGGGCTGCAATAAAATGCAGCAGAAAGATCCTAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 90 bp | AGCCTGTGCAGGGAAATTCCTGTTTATAAAACCATCAGAATCTCTTaGGACTTATTCACTATCACAAGAACAGCATGGGAAAACCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: SLCREIPVYKTIRIS*DLFTITRTAWENPP Trigger: GGGCGGGTTTTCCCATGCTGTTCTTGTGATAGTGAATAAGTCCCAAGAGATTCTGATGGTTTTATAAACAGGAATTTCCCTGCACAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CCA 90 bp | ATTGAAGTGAAACAGCAGTCACACGGCCTCTGCTTTGAGGTTAGCTaGCAGTTTCTGTTTAAACTTGAATTTTCTTTCCTAGGACAGGAC | + |
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Preference number: 5 (lower is better) Translates to: IEVKQQSHGLCFEVS*QFLFKLEFSFLGQD Trigger: GTCCTGTCCTAGGAAAGAAAATTCAAGTTTAAACAGAAACTGCCAGCTAACCTCAAAGCAGAGGCCGTGTGACTGCTGTTTCACTTCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 90 bp | GTCGTTGGATTAAGATTTCAAGTCTGTTCTTTAGGATCTTTCTGCTaGATTTTATTGCAGCCCACCATGCATTGCAACTGTCTCAGGACT | + |
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Preference number: 5 (lower is better) Translates to: VVGLRFQVCSLGSFC*ILLQPTMHCNCLRT Trigger: AGTCCTGAGACAGTTGCAATGCATGGTGGGCTGCAATAAAATGCAGCAGAAAGATCCTAAAGAACAGACTTGAAATCTTAATCCAACGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 90 bp | TTGGTCGTTGGATTAAGATTTCAAGTCTGTTCTTTAGGATCTTTCTaGTGCATTTTATTGCAGCCCACCATGCATTGCAACTGTCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LVVGLRFQVCSLGSF*CILLQPTMHCNCLR Trigger: CCTGAGACAGTTGCAATGCATGGTGGGCTGCAATAAAATGCAGCAGAAAGATCCTAAAGAACAGACTTGAAATCTTAATCCAACGACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 90 bp | TTCAAAATTAAAAAGTATTTGAAACTGACAATGACAAACAGGCACTaGCAAGTTTCCGCCGGCCTCACACTCTCTGTGGTTATTCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: FKIKKYLKLTMTNRH*QVSAGLTLSVVIQS Trigger: GGACTGAATAACCACAGAGAGTGTGAGGCCGGCGGAAACTTGGCAGTGCCTGTTTGTCATTGTCAGTTTCAAATACTTTTTAATTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 90 bp | ATCAAACCACAGCACTACTGGGCATTATTTGTAATGGCAAACTATTaGAAACAATCTAAAGCCCATCATAGACATCATAGAAACTATTCT | + |
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Preference number: 5 (lower is better) Translates to: IKPQHYWALFVMANY*KQSKAHHRHHRNYS Trigger: AGAATAGTTTCTATGATGTCTATGATGGGCTTTAGATTGTTTGCAATAGTTTGCCATTACAAATAATGCCCAGTAGTGCTGTGGTTTGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567549.2 |
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| CDS TCA 72 bp | GCGTGCACCGCCACCTCCATGTTTCTAGGAGGAAACTaGGGCACGGGGGCTGCGGCTCCTGGACGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ACTATSMFLGGN*GTGAAAPGRTW Trigger: CCAGGTGCGTCCAGGAGCCGCAGCCCCCGTGCCTCAGTTTCCTCCTAGAAACATGGAGGTGGCGGTGCACGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000567549.2 |
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| CDS CCA 72 bp | GTGGCGATGCAACGCGGCTTTCTTGGCTGCTGCAGGTaGACCATGGCAGCGAAGACGTGGAAGCTGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VAMQRGFLGCCR*TMAAKTWKLRE Trigger: TTCCCTCAGCTTCCACGTCTTCGCTGCCATGGTCCACCTGCAGCAGCCAAGAAAGCCGCGTTGCATCGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | AGAGAAGCCGAGGACACAGGAGGATCAGACACGACGTaGCACCCCAGGTGGGGTCACAGCAGAGAGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: REAEDTGGSDTT*HPRWGHSRERT Trigger: TGTCCTCTCTCTGCTGTGACCCCACCTGGGGTGCCACGTCGTGTCTGATCCTCCTGTGTCCTCGGCTTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 72 bp | TTCCCCAGCCCTCCCCTGAAGGTAGCACAGGCTTCGTaGCTCATCCCAAAGAGTGGAGCGGTGGAAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: FPSPPLKVAQAS*LIPKSGAVEGK Trigger: CTTCCCTTCCACCGCTCCACTCTTTGGGATGAGTCACGAAGCCTGTGCTACCTTCAGGGGAGGGCTGGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | AGGGCACCTCCCAGCCTCTTGACAGTTCCACATGGCTaGGGTGGCCTCACAATCATGGCGGAAGGTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: RAPPSLLTVPHG*GGLTIMAEGEG Trigger: TCCTTCACCTTCCGCCATGATTGTGAGGCCACCCCAGCCATGTGGAACTGTCAAGAGGCTGGGAGGTGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | TGGAGTTTAGCTCGTGGCGATGCAACGCGGCTTTCTTaGCTGCTGCAGGTGGACCATGGCAGCGAAGACGTG | + |
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Preference number: 6 (lower is better) Translates to: WSLARGDATRLS*LLQVDHGSEDV Trigger: CACGTCTTCGCTGCCATGGTCCACCTGCAGCAGCCAAGAAAGCCGCGTTGCATCGCCACGAGCTAAACTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | GACACAGGAGGATCAGACACGACGTGGCACCCCAGGTaGGGTCACAGCAGAGAGAGGACATGGATGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: DTGGSDTTWHPR*GHSRERTWMEA Trigger: AGCTTCCATCCATGTCCTCTCTCTGCTGTGACCCCACCTGGGGTGCCACGTCGTGTCTGATCCTCCTGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 72 bp | GGCCAATCCTGTGTCTGGCAAGGCTGCTTCCTGGTTTaGAGACACCATCTTCCTCCCTTCAGCCCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GQSCVWQGCFLV*RHHLPPFSPQQ Trigger: CTGCTGTGGGCTGAAGGGAGGAAGATGGTGTCTGCAAACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 72 bp | GGGCATCCACAGGGTGCCCAACAGTCTCCTCCACACTaGCAGGGTCATGGCAAAGGAGAGACAGAAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: GHPQGAQQSPPH*QGHGKGETEMS Trigger: TGACATTTCTGTCTCTCCTTTGCCATGACCCTGGCAGTGTGGAGGAGACTGTTGGGCACCCTGTGGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | ACAGTTCTGGAGGCTGGAAGTCTGGGGTCAAGGTTGTaGCCAATCCTGTGTCTGGCAAGGCTGCTTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: TVLEAGSLGSRL*PILCLARLLPG Trigger: ACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416204.1 ENST00000426962.1 |
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| CDS CCA 72 bp | TCAGTTCTGGAGGCTGGAAGTCTGGGGTCAAGGTTGTaGCCAATCCTGTGTCTGGCAAGGCTGCTTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SVLEAGSLGSRL*PILCLARLLPG Trigger: ACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 72 bp | CTCACAGTTCTGGAGGCTGGAAGTCTGGGGTCAAGGTaGTGGCCAATCCTGTGTCTGGCAAGGCTGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LTVLEAGSLGSR*WPILCLARLLP Trigger: AGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416204.1 ENST00000426962.1 |
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| CDS CAA 72 bp | CCTTCAGTTCTGGAGGCTGGAAGTCTGGGGTCAAGGTaGTGGCCAATCCTGTGTCTGGCAAGGCTGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PSVLEAGSLGSR*WPILCLARLLP Trigger: AGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 72 bp | TCTGATCTTGAAAGGCAGAGGGCACCTCCCAGCCTCTaGACAGTTCCACATGGCTGGGGTGGCCTCACAATC | + |
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Preference number: 6 (lower is better) Translates to: SDLERQRAPPSL*TVPHGWGGLTI Trigger: GATTGTGAGGCCACCCCAGCCATGTGGAACTGTCAAGAGGCTGGGAGGTGCCCTCTGCCTTTCAAGATCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 72 bp | TTCCACAGCCCTGGGATTCTTCCAGATTCAGTCAAGTaGATCCTCATGGTGATGTGTGGCCAGCAGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: FHSPGILPDSVK*ILMVMCGQQAS Trigger: GGACGCCTGCTGGCCACACATCACCATGAGGATGCACTTGACTGAATCTGGAAGAATCCCAGGGCTGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CCA 72 bp | AAAGATGGCCCGGCAGGTCCGTCCAAACACAAAGACTaGACGCAGAGACCCGGAGAACAGCAAAACGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: KDGPAGPSKHKD*TQRPGEQQNGD Trigger: ATCTCCGTTTTGCTGTTCTCCGGGTCTCTGCGTCCAGTCTTTGTGTTTGGACGGACCTGCCGGGCCATCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | CTTGGCTGCTGCAGGTGGACCATGGCAGCGAAGACGTaGAAGCTGAGGGAAATTAGCAGCAGCTTGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LGCCRWTMAAKT*KLREISSSLQK Trigger: TTTCTGCAAGCTGCTGCTAATTTCCCTCAGCTTCCACGTCTTCGCTGCCATGGTCCACCTGCAGCAGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 72 bp | GAGTTCGGCAGGCACTCCTGGTCTTCCTTTATCTTCTaGCAGAAAGATGGCCCGGCAGGTCCGTCCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: EFGRHSWSSFIF*QKDGPAGPSKH Trigger: GTGTTTGGACGGACCTGCCGGGCCATCTTTCTGCAAGAAGATAAAGGAAGACCAGGAGTGCCTGCCGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 72 bp | GGATTCTTCCAGATTCAGTCAAGTGCATCCTCATGGTaGTGTGTGGCCAGCAGGCGTCCAGTTCCACATGGC | + |
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Preference number: 6 (lower is better) Translates to: GFFQIQSSASSW*CVASRRPVPHG Trigger: GCCATGTGGAACTGGACGCCTGCTGGCCACACATCACCATGAGGATGCACTTGACTGAATCTGGAAGAATCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS GCA 72 bp | AGGCAGGTCTTACATGGTGGCAGGCAAGAGAGCCTGTaGAGGGAAATTCCTTCCCAGGCCACAGAAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: RQVLHGGRQESL*REIPSQATEME Trigger: TTCCATTTCTGTGGCCTGGGAAGGAATTTCCCTGCACAGGCTCTCTTGCCTGCCACCATGTAAGACCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | GAAGGTAGCACAGGCTTCGTGACTCATCCCAAAGAGTaGAGCGGTGGAAGGGAAGACAGTGACTTTACAGCG | + |
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Preference number: 6 (lower is better) Translates to: EGSTGFVTHPKE*SGGREDSDFTA Trigger: CGCTGTAAAGTCACTGTCTTCCCTTCCACCGCTCCACTCTTTGGGATGAGTCACGAAGCCTGTGCTACCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 72 bp | TTCTGTGTGCAGGAACTGGGTTTGCTTCTGAGGTACTaGAGCCCTCAGCCTAGTGCCTCCCGATGCGTTATT | + |
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Preference number: 6 (lower is better) Translates to: FCVQELGLLLRY*SPQPSASRCVI Trigger: AATAACGCATCGGGAGGCACTAGGCTGAGGGCTTCAGTACCTCAGAAGCAAACCCAGTTCCTGCACACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | GAGATTTTCAATGACAGTCTTGCAAGACTGGGTGTCTaGCTGGCATGCAGCCACCCCCAGCAGAGTTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: EIFNDSLARLGV*LACSHPQQSFN Trigger: GTTGAAACTCTGCTGGGGGTGGCTGCATGCCAGCCAGACACCCAGTCTTGCAAGACTGTCATTGAAAATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | ATGAACTCAGTCCTTCAGTTCTGGAGGCTGGAAGTCTaGGGTCAAGGTTGTGGCCAATCCTGTGTCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: MNSVLQFWRLEV*GQGCGQSCVWQ Trigger: TTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGAAGGACTGAGTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 72 bp | CGGAGAACAGCAAAACGGAGATTTTCAATGACAGTCTaGCAAGACTGGGTGTCTGGCTGGCATGCAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: RRTAKRRFSMTV*QDWVSGWHAAT Trigger: GGTGGCTGCATGCCAGCCAGACACCCAGTCTTGCAAGACTGTCATTGAAAATCTCCGTTTTGCTGTTCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 90 bp | CATTTATTTCTCACAGTTCTGGAGGCTGGAAGTCTGGGGTCAAGGTaGTGGCCAATCCTGTGTCTGGCAAGGCTGCTTCCTGGTTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HLFLTVLEAGSLGSR*WPILCLARLLPGLQ Trigger: CTGCAAACCAGGAAGCAGCCTTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGTGAGAAATAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000416204.1 ENST00000426962.1 |
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| CDS TCA 72 bp | CGGCCTCACACTCTCTGTGGTTATTCAGTCCATAAATaGCGGCAGGAGGGGGATCAGCTACTCTCTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: RPHTLCGYSVHK*RQEGDQLLSDL Trigger: AAGATCAGAGAGTAGCTGATCCCCCTCCTGCCGTCATTTATGGACTGAATAACCACAGAGAGTGTGAGGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 72 bp | AATGACAGTCTTGCAAGACTGGGTGTCTGGCTGGCATaGAGCCACCCCCAGCAGAGTTTCAACAAGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: NDSLARLGVWLA*SHPQQSFNKQF Trigger: AAATTGCTTGTTGAAACTCTGCTGGGGGTGGCTGCATGCCAGCCAGACACCCAGTCTTGCAAGACTGTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 90 bp | AGGAGACAGGAATCCATGAGCTGGGCAGCACTGAACTACAGCAGTTaGGGCTCTACCAAGGAGCACAAGGAAAACCTTCATCAGTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RRQESMSWAALNYSS*GSTKEHKENLHQCS Trigger: AGAACACTGATGAAGGTTTTCCTTGTGCTCCTTGGTAGAGCCCAAACTGCTGTAGTTCAGTGCTGCCCAGCTCATGGATTCCTGTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 72 bp | GTGAGGGGAAGAACATTTCACCTCCTTGGTATTATTTaGGGAAGCCCACCACCTCAGGCTAACCATGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VRGRTFHLLGII*GSPPPQANHEE Trigger: TTCCTCATGGTTAGCCTGAGGTGGTGGGCTTCCGCAAATAATACCAAGGAGGTGAAATGTTCTTCCCCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 72 bp | GCCAAACCATATCAGCATCTTTCTGGGTGTCACAACTaGCTATGGAGCAGTTTGGTGGAACAAGCAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AKPYQHLSGCHN*LWSSLVEQAGL Trigger: AAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAAGATGCTGATATGGTTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CCA 72 bp | GACATTTATTTCTCACAGTTCTGGAGGCTGGAAGTCTaGGGTCAAGGTTGTGGCCAATCCTGTGTCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: DIYFSQFWRLEV*GQGCGQSCVWQ Trigger: TTGCCAGACACAGGATTGGCCACAACCTTGACCCCAGACTTCCAGCCTCCAGAACTGTGAGAAATAAATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000416204.1 ENST00000426962.1 |
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| CDS CCA 72 bp | CCATATCAGCATCTTTCTGGGTGTCACAACTGCCTATaGAGCAGTTTGGTGGAACAAGCAGGCCTTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: PYQHLSGCHNCL*SSLVEQAGLGN Trigger: GTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAAGATGCTGATATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CAA 90 bp | GGTGTCACAACTGCCTATGGAGCAGTTTGGTGGAACAAGCAGGCCTaGGTAACACAGGATATTTCAGAGACCATGGATGATGATGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: GVTTAYGAVWWNKQA*VTQDISETMDDDVA Trigger: GGCTACATCATCATCCATGGTCTCTGAAATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS TCA 72 bp | CATGCATTGCAACTGTCTCAGGACTCTTCAAACATTTaGCTATGGCCCTGGTGGCTGCACGTAGCTGATAAG | + |
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Preference number: 6 (lower is better) Translates to: HALQLSQDSSNI*LWPWWLHVADK Trigger: CTTATCAGCTACGTGCAGCCACCAGGGCCATAGTCAAATGTTTGAAGAGTCCTGAGACAGTTGCAATGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 72 bp | TTTATCTTCTTGCAGAAAGATGGCCCGGCAGGTCTGTaGCAACATTCACACCCACAAGGTCAACCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FIFLQKDGPAGL*QHSHPQGQPGR Trigger: TCTTCCTGGTTGACCTTGTGGGTGTGAATGTTGTCACAGACCTGCCGGGCCATCTTTCTGCAAGAAGATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426962.1 |
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| CDS CCA 72 bp | GTAAAGAGTTATTTGAGGAGACAGGAATCCATGAGCTaGGCAGCACTGAACTACAGCAGTTTGGGCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: VKSYLRRQESMS*AALNYSSLGST Trigger: GGTAGAGCCCAAACTGCTGTAGTTCAGTGCTGCCCAGCTCATGGATTCCTGTCTCCTCAAATAACTCTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 72 bp | CATCTTTCTGGGTGTCACAACTGCCTATGGAGCAGTTaGGTGGAACAAGCAGGCCTTGGTAACACAGGATAT | + |
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Preference number: 6 (lower is better) Translates to: HLSGCHNCLWSS*VEQAGLGNTGY Trigger: ATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CAA 90 bp | CCATATCAGCATCTTTCTGGGTGTCACAACTGCCTATGGAGCAGTTaGGTGGAACAAGCAGGCCTTGGTAACACAGGATATTTCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PYQHLSGCHNCLWSS*VEQAGLGNTGYFRD Trigger: GTCTCTGAAATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAAGATGCTGATATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CCA 72 bp | TTTCTGGGTGTCACAACTGCCTATGGAGCAGTTTGGTaGAACAAGCAGGCCTTGGTAACACAGGATATTTCA | + |
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Preference number: 6 (lower is better) Translates to: FLGVTTAYGAVW*NKQALVTQDIS Trigger: TGAAATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CCA 72 bp | ATCTTTCTGGGTGTCACAACTGCCTATGGAGCAGTTTaGTGGAACAAGCAGGCCTTGGTAACACAGGATATT | + |
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Preference number: 6 (lower is better) Translates to: IFLGVTTAYGAV*WNKQALVTQDI Trigger: AATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGTTGTGACACCCAGAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CAA 72 bp | ACTGCCTATGGAGCAGTTTGGTGGAACAAGCAGGCCTaGGTAACACAGGATATTTCAGAGACCATGGATGAT | + |
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Preference number: 6 (lower is better) Translates to: TAYGAVWWNKQA*VTQDISETMDD Trigger: ATCATCCATGGTCTCTGAAATATCCTGTGTTACCAAGGCCTGCTTGTTCCACCAAACTGCTCCATAGGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CAA 90 bp | TTTGGGCTCTACCAAGGAGCACAAGGAAAACCTTCATCAGTGTTCTaGGAAGGAAGAACAGAAAAAGGATGGATTGAAGTGAAACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: FGLYQGAQGKPSSVF*EGRTEKGWIEVKQQ Trigger: CTGCTGTTTCACTTCAATCCATCCTTTTTCTGTTCTTCCTTCCAAGAACACTGATGAAGGTTTTCCTTGTGCTCCTTGGTAGAGCCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 90 bp | TTAAGATTTCAAGTCTGTTCTTTAGGATCTTTCTGCTGCATTTTATaGCAGCCCACCATGCATTGCAACTGTCTCAGGACTCTTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: LRFQVCSLGSFCCIL*QPTMHCNCLRTLQT Trigger: TGTTTGAAGAGTCCTGAGACAGTTGCAATGCATGGTGGGCTGCAATAAAATGCAGCAGAAAGATCCTAAAGAACAGACTTGAAATCTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS TCA 72 bp | AAGAGGCAAATCTTTCTTACTCCAAATAACATCATATaGTCATATGTAGCAGCCCCTCCAGGAGATGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: KRQIFLTPNNII*SYVAAPPGDGV Trigger: AACTCCATCTCCTGGAGGGGCTGCTACATATGATCATATGATGTTATTTGGAGTAAGAAAGATTTGCCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS GCA 72 bp | GGATTAAGATTTCAAGTCTGTTCTTTAGGATCTTTCTaGTGCATTTTATTGCAGCCCACCATGCATTGCAAC | + |
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Preference number: 6 (lower is better) Translates to: GLRFQVCSLGSF*CILLQPTMHCN Trigger: GTTGCAATGCATGGTGGGCTGCAATAAAATGCAGCAGAAAGATCCTAAAGAACAGACTTGAAATCTTAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CCA 72 bp | GGGTTACGATCTTCCTGGACATCACCTATTGGTCGTTaGATTAAGATTTCAAGTCTGTTCTTTAGGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: GLRSSWTSPIGR*IKISSLFFRIF Trigger: AAAGATCCTAAAGAACAGACTTGAAATCTTAATCCAACGACCAATAGGTGATGTCCAGGAAGATCGTAACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 72 bp | AGTAAATGGGGTTACGATCTTCCTGGACATCACCTATaGGTCGTTGGATTAAGATTTCAAGTCTGTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SKWGYDLPGHHL*VVGLRFQVCSL Trigger: TAAAGAACAGACTTGAAATCTTAATCCAACGACCAATAGGTGATGTCCAGGAAGATCGTAACCCCATTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000416204.1 ENST00000429456.1 ENST00000629169.1 ENST00000631041.1 |
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| CDS CAA 90 bp | ATACTCATATTTGCTTGCTACACACCAGACACTGTTTTAAATGTTTaGCACACGTTAACTCATCTGTTCTTACAGAAATCCTGTAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: ILIFACYTPDTVLNV*HTLTHLFLQKSCSV Trigger: CACGCTACAGGATTTCTGTAAGAACAGATGAGTTAACGTGTGCAAAACATTTAAAACAGTGTCTGGTGTGTAGCAAGCAAATATGAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567549.2 |
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| CDS CCA 72 bp | AGGGAAATTCCTGTTTATAAAACCATCAGAATCTCTTaGGACTTATTCACTATCACAAGAACAGCATGGGAA | + |
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Preference number: 6 (lower is better) Translates to: REIPVYKTIRIS*DLFTITRTAWE Trigger: TTCCCATGCTGTTCTTGTGATAGTGAATAAGTCCCAAGAGATTCTGATGGTTTTATAAACAGGAATTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451070.1 ENST00000626751.1 ENST00000631095.1 |
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| CDS CAA 72 bp | TTTGCTTGCTACACACCAGACACTGTTTTAAATGTTTaGCACACGTTAACTCATCTGTTCTTACAGAAATCC | + |
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Preference number: 6 (lower is better) Translates to: FACYTPDTVLNV*HTLTHLFLQKS Trigger: GGATTTCTGTAAGAACAGATGAGTTAACGTGTGCAAAACATTTAAAACAGTGTCTGGTGTGTAGCAAGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567549.2 |
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