Pregenerated sensors for LINC01232 (Homo sapiens)
Ensembl gene IDs: ENSG00000280734Ensembl transcript IDs: ENST00000625254.1, ENST00000625287.1, ENST00000625369.2, ENST00000626729.2, ENST00000630421.2, ENST00000656995.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGGCCCTGCGCATGCGTGATACTTGCACCGGTCGAGATGGTAGCATaGGTCTGGAGGTCATTTTCTTTGAGAAAGGCTCCGCTTCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: RPCACVILAPVEMVA*VWRSFSLRKAPLLR Trigger: CCGGAGAAGCGGAGCCTTTCTCAAAGAAAATGACCTCCAGACTCATGCTACCATCTCGACCGGTGCAAGTATCACGCATGCGCAGGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625254.1 |
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| CDS CCA 90 bp | TGGAGACCGGGTGACTTCTTGATGGCCAGGGGTGGTGTCTTCACCTaGAACTGGCTGGAAACCCTGTCACATGATCATCTGAAGCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: WRPGDFLMARGGVFT*NWLETLSHDHLKLD Trigger: ATCAAGCTTCAGATGATCATGTGACAGGGTTTCCAGCCAGTTCCAGGTGAAGACACCACCCCTGGCCATCAAGAAGTCACCCGGTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 90 bp | AACAAAAGCAGAGATTTATTCAAAGTGAAATTACACTCCACCATGTaGGAGTGGGCAGAGCAGCAGCTCAAGGGCCCCAGATACAGAATC | + |
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Preference number: 5 (lower is better) Translates to: NKSRDLFKVKLHSTM*EWAEQQLKGPRYRI Trigger: GATTCTGTATCTGGGGCCCTTGAGCTGCTGCTCTGCCCACTCTCACATGGTGGAGTGTAATTTCACTTTGAATAAATCTCTGCTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 90 bp | AGGGTCCCTGACTTCCCACAACACTCCACCACTGAGGACCTACTATaGACTTTCCTTAAGGTTTTTCTATCCCACTTAAAGCAACCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RVPDFPQHSTTEDLL*TFLKVFLSHLKQPF Trigger: AAAGGGTTGCTTTAAGTGGGATAGAAAAACCTTAAGGAAAGTTCATAGTAGGTCCTCAGTGGTGGAGTGTTGTGGGAAGTCAGGGACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626729.2 ENST00000656995.1 |
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| CDS GCA 90 bp | CTGGGAGGAACGCCTTACTGCATAAGCAGTAAGAACAGAGTAATTTaGTCCTGCATCAAAAAGAAACTGAATTTGGGTGCCCATGACGTC | + |
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Preference number: 5 (lower is better) Translates to: LGGTPYCISSKNRVI*SCIKKKLNLGAHDV Trigger: GACGTCATGGGCACCCAAATTCAGTTTCTTTTTGATGCAGGAGCAAATTACTCTGTTCTTACTGCTTATGCAGTAAGGCGTTCCTCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS TCA 90 bp | TGGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGTaGTTCCTCAGGGATCTAGAACCAGAAATACCATTTGACCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: WWECKLVQPLWKTVW*FLRDLEPEIPFDPA Trigger: TGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCCTGAGGAATCACCACACTGTCTTCCACAATGGTTGAACTAATTTACACTCCCACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS GCA 90 bp | GGAACGCCTTACTGCATAAGCAGTAAGAACAGAGTAATTTGCTCCTaGATCAAAAAGAAACTGAATTTGGGTGCCCATGACGTCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: GTPYCISSKNRVICS*IKKKLNLGAHDVQS Trigger: ACTCTGGACGTCATGGGCACCCAAATTCAGTTTCTTTTTGATGCAGGAGCAAATTACTCTGTTCTTACTGCTTATGCAGTAAGGCGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CCA 90 bp | CTTTTCTTGCATTTGAAGCAAGAGCCTTTGCTGGCATTATCTTTATaGCCCTTCGGGTTTCCCTTAGACACTCTTTGTACATTCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LFLHLKQEPLLALSL*PFGFPLDTLCTFRA Trigger: TGCCCTGAATGTACAAAGAGTGTCTAAGGGAAACCCGAAGGGCCATAAAGATAATGCCAGCAAAGGCTCTTGCTTCAAATGCAAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS GCA 90 bp | GTTGCAGAAAGCAACCAATCAGAGGCTAAGATGAAGTTACAAAGTTaGACTTCTATGCAAACGAAGACTTGGCCTGCAGAATTTCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: VAESNQSEAKMKLQS*TSMQTKTWPAEFPD Trigger: GTCTGGAAATTCTGCAGGCCAAGTCTTCGTTTGCATAGAAGTGCAACTTTGTAACTTCATCTTAGCCTCTGATTGGTTGCTTTCTGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CCA 90 bp | GCTAAGATGAAGTTACAAAGTTGCACTTCTATGCAAACGAAGACTTaGCCTGCAGAATTTCCAGACTGCAGCAACCAATCAGAGACTGAA | + |
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Preference number: 5 (lower is better) Translates to: AKMKLQSCTSMQTKT*PAEFPDCSNQSETE Trigger: TTCAGTCTCTGATTGGTTGCTGCAGTCTGGAAATTCTGCAGGCCAAGTCTTCGTTTGCATAGAAGTGCAACTTTGTAACTTCATCTTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 90 bp | CAAACATCTGATTGGTTGCAGAAAGCAACCAATCAGAGGCTAAGATaGAGTTACAAAGTTGCACTTCTATGCAAACGAAGACTTGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: QTSDWLQKATNQRLR*SYKVALLCKRRLGL Trigger: CAGGCCAAGTCTTCGTTTGCATAGAAGTGCAACTTTGTAACTTCATCTTAGCCTCTGATTGGTTGCTTTCTGCAACCAATCAGATGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 90 bp | AATCAGTCTGATTGGTTGTGGAAAGCAACCAATCAGAAGCTGAAGTaGAGTTACAAAGGTCACACGCCTATGCAAACATCTGATTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: NQSDWLWKATNQKLK*SYKGHTPMQTSDWL Trigger: CAACCAATCAGATGTTTGCATAGGCGTGTGACCTTTGTAACTTCACTTCAGCTTCTGATTGGTTGCTTTCCACAACCAATCAGACTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS GCA 90 bp | TGCACTTCTATGCAAACGAAGACTTGGCCTGCAGAATTTCCAGACTaGAGCAACCAATCAGAGACTGAAGTGAAATTACAAAGTTACACT | + |
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Preference number: 5 (lower is better) Translates to: CTSMQTKTWPAEFPD*SNQSETEVKLQSYT Trigger: AGTGTAACTTTGTAATTTCACTTCAGTCTCTGATTGGTTGCTGCAGTCTGGAAATTCTGCAGGCCAAGTCTTCGTTTGCATAGAAGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS GCA 90 bp | ACTGCAACACTATTTACCATGGCAAAGACTTGGAACCAACCCAAATaGCCATCAGTGATAGACGGGATAAAGAAAATATGGCACATATAC | + |
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Preference number: 5 (lower is better) Translates to: TATLFTMAKTWNQPK*PSVIDGIKKIWHIY Trigger: GTATATGTGCCATATTTTCTTTATCCCGTCTATCACTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCCATGGTAAATAGTGTTGCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS GCA 90 bp | TATCTCCCTTGTTCCTTGAACGTTGCTGTTATCCTGTTCTTAAGGTaGCCAGATTTGATACTGTTCAAACACACATGCTCTACAAACAAT | + |
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Preference number: 5 (lower is better) Translates to: YLPCSLNVAVILFLR*PDLILFKHTCSTNN Trigger: ATTGTTTGTAGAGCATGTGTGTTTGAACAGTATCAAATCTGGGCACCTTAAGAACAGGATAACAGCAACGTTCAAGGAACAAGGGAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626729.2 ENST00000656995.1 |
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| CDS GCA 90 bp | AACAAAGAATTGAACAAAACGCACTGGGTATACTGTACTTTTATTTaGTATATCCGACAATCTTATACAGAAGTCGTCATGGGAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: NKELNKTHWVYCTFI*YIRQSYTEVVMGNS Trigger: TGAGTTTCCCATGACGACTTCTGTATAAGATTGTCGGATATAGCAAATAAAAGTACAGTATACCCAGTGCGTTTTGTTCAATTCTTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625369.2 |
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| CDS GCA 72 bp | GTAGGAGTTGGCGAGGTGCGGCCGGGCGGCCGGCCCTaGGCATGCGTGATACTTGCACCGGTCGAGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: VGVGEVRPGGRP*ACVILAPVEMV Trigger: TACCATCTCGACCGGTGCAAGTATCACGCATGCGCAGGGCCGGCCGCCCGGCCGCACCTCGCCAACTCCTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625254.1 ENST00000656995.1 |
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| CDS CAA 90 bp | GAGTCCTTCCCTCTTCAAGGCAGGGCAGCCATCCCTGTTCACTCCTaGGCCTTCAGACAGCACTGGAGAGTGGTCCCAGCCAGTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: ESFPLQGRAAIPVHS*AFRQHWRVVPASSP Trigger: AGGGGAACTGGCTGGGACCACTCTCCAGTGCTGTCTGAAGGCCAAGGAGTGAACAGGGATGGCTGCCCTGCCTTGAAGAGGGAAGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625369.2 ENST00000626729.2 ENST00000656995.1 |
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| CDS CCA 72 bp | CTCTTCAAGGCAGGGCAGCCATCCCTGTTCACTCCTTaGCCTTCAGACAGCACTGGAGAGTGGTCCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LFKAGQPSLFTP*PSDSTGEWSQP Trigger: TGGCTGGGACCACTCTCCAGTGCTGTCTGAAGGCCAAGGAGTGAACAGGGATGGCTGCCCTGCCTTGAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625369.2 ENST00000626729.2 ENST00000656995.1 |
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| CDS CCA 72 bp | GCCATCCCTGTTCACTCCTTGGCCTTCAGACAGCACTaGAGAGTGGTCCCAGCCAGTTCCCCTCAATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: AIPVHSLAFRQH*RVVPASSPQLP Trigger: TGGCAATTGAGGGGAACTGGCTGGGACCACTCTCCAGTGCTGTCTGAAGGCCAAGGAGTGAACAGGGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625369.2 ENST00000626729.2 ENST00000656995.1 |
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| CDS CCA 72 bp | CTGTTCACTCCTTGGCCTTCAGACAGCACTGGAGAGTaGTCCCAGCCAGTTCCCCTCAATTGCCAAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LFTPWPSDSTGE*SQPVPLNCQGA Trigger: AGCTCCTTGGCAATTGAGGGGAACTGGCTGGGACCACTCTCCAGTGCTGTCTGAAGGCCAAGGAGTGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625369.2 ENST00000626729.2 ENST00000656995.1 |
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| CDS GCA 72 bp | TGTCAGATGTCTCTGACCTTAGATGGGGGCTGGCACTaGTTTGGGATGGTTCCCTCCACTATCGGGGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: CQMSLTLDGGWH*FGMVPSTIGGN Trigger: ATTTCCCCCGATAGTGGAGGGAACCATCCCAAAGCAGTGCCAGCCCCCATCTAAGGTCAGAGACATCTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000626729.2 |
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| CDS CCA 72 bp | GGTGACTTCTTGATGGCCAGGGGTGGTGTCTTCACCTaGAACTGGCTGGAAACCCTGTCACATGATCATCTG | + |
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Preference number: 6 (lower is better) Translates to: GDFLMARGGVFT*NWLETLSHDHL Trigger: CAGATGATCATGTGACAGGGTTTCCAGCCAGTTCCAGGTGAAGACACCACCCCTGGCCATCAAGAAGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CCA 72 bp | TTAGTCTGTCAGATGTCTCTGACCTTAGATGGGGGCTaGCACTGCTTTGGGATGGTTCCCTCCACTATCGGG | + |
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Preference number: 6 (lower is better) Translates to: LVCQMSLTLDGG*HCFGMVPSTIG Trigger: CCCGATAGTGGAGGGAACCATCCCAAAGCAGTGCCAGCCCCCATCTAAGGTCAGAGACATCTGACAGACTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000626729.2 |
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| CDS CAA 72 bp | GATGGTGTCATAATTAAGGCTACCACTGACTGCCCATaGCTGGGGGCTGGGCAGCTCATAATGGGGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: DGVIIKATTDCP*LGAGQLIMGPN Trigger: GTTTGGCCCCATTATGAGCTGCCCAGCCCCCAGCAATGGGCAGTCAGTGGTAGCCTTAATTATGACACCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS TCA 72 bp | TTCTTTGAGAAAGGCTCCGCTTCTCCGGGTTTTTGCTaGTGCCGATCCCGGGGGATTGAGGAAACATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FFEKGSASPGFC*CRSRGIEETLS Trigger: GCTCAATGTTTCCTCAATCCCCCGGGATCGGCATCAGCAAAAACCCGGAGAAGCGGAGCCTTTCTCAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000625254.1 |
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| CDS TCA 72 bp | GCATGCGTGATACTTGCACCGGTCGAGATGGTAGCATaGGTCTGGAGGTCATTTTCTTTGAGAAAGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ACVILAPVEMVA*VWRSFSLRKAP Trigger: CGGAGCCTTTCTCAAAGAAAATGACCTCCAGACTCATGCTACCATCTCGACCGGTGCAAGTATCACGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625254.1 |
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| CDS CAA 72 bp | GGTCCAAATACCCTCTTGAGGTTTTCCATTGGCCACTaGGTGTTCACCTCACGTAAAGGAAGTGGTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GPNTLLRFSIGH*VFTSRKGSGGP Trigger: TGGGCCACCACTTCCTTTACGTGAGGTGAACACCAAGTGGCCAATGGAAAACCTCAAGAGGGTATTTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 72 bp | ACTGAAAGACTGGCTCGCCAAACCCGTAGAGGGTCTTaGGTGCAAGTTGTCCAGATTCTTGGGGTTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: TERLARQTRRGS*VQVVQILGVLN Trigger: GTTCAAAACCCCAAGAATCTGGACAACTTGCACTCAAGACCCTCTACGGGTTTGGCGAGCCAGTCTTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625369.2 ENST00000626729.2 ENST00000656995.1 |
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| CDS TCA 72 bp | AGAGATTTATTCAAAGTGAAATTACACTCCACCATGTaGGAGTGGGCAGAGCAGCAGCTCAAGGGCCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RDLFKVKLHSTM*EWAEQQLKGPR Trigger: TCTGGGGCCCTTGAGCTGCTGCTCTGCCCACTCTCACATGGTGGAGTGTAATTTCACTTTGAATAAATCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 72 bp | GAGAAGAGGACTTTGAAAAGTAGAGGGCCCATTAGGTaGCCCAAACTTTACCCAGGGCATCCCCCTGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: EKRTLKSRGPIR*PKLYPGHPPEK Trigger: TTTTTCAGGGGGATGCCCTGGGTAAAGTTTGGGTCACCTAATGGGCCCTCTACTTTTCAAAGTCCTCTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000626729.2 |
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| CDS CAA 90 bp | GGGGACTTAGCACAATCCTTTGCCCAATGTCTTCTTTTCTTGCATTaGAAGCAAGAGCCTTTGCTGGCATTATCTTTATGGCCCTTCGGG | + |
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Preference number: 6 (lower is better) Translates to: GDLAQSFAQCLLFLH*KQEPLLALSLWPFG Trigger: CCCGAAGGGCCATAAAGATAATGCCAGCAAAGGCTCTTGCTTCAAATGCAAGAAAAGAAGACATTGGGCAAAGGATTGTGCTAAGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS TCA 72 bp | CCAGATACAGAATCTTCTCAGGTCCAAATACCCTCTTaGGGTTTTCCATTGGCCACTTGGTGTTCACCTCAC | + |
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Preference number: 6 (lower is better) Translates to: PDTESSQVQIPS*GFPLATWCSPH Trigger: GTGAGGTGAACACCAAGTGGCCAATGGAAAACCTCAAGAGGGTATTTGGACCTGAGAAGATTCTGTATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CCA 72 bp | GGTACTTTCAATTTCCCATATGCCACACAGAAAAGGTaGGGGTTTGCAAAGGGAGTAGCCTCTGGTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GTFNFPYATQKR*GFAKGVASGPF Trigger: AAAAGGACCAGAGGCTACTCCCTTTGCAAACCCCCACCTTTTCTGTGTGGCATATGGGAAATTGAAAGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CCA 72 bp | TTTAAAGTCTCCCTCCAGCCTGCCATAAAACATGGCTaGATTTTCCTCCTTGCCTTGTGTAACCTCCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: FKVSLQPAIKHG*IFLLALCNLPY Trigger: GTAAGGGAGGTTACACAAGGCAAGGAGGAAAATCCAGCCATGTTTTATGGCAGGCTGGAGGGAGACTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CAA 72 bp | CCCAGATACAGAATCTTCTCAGGTCCAAATACCCTCTaGAGGTTTTCCATTGGCCACTTGGTGTTCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: PRYRIFSGPNTL*RFSIGHLVFTS Trigger: TGAGGTGAACACCAAGTGGCCAATGGAAAACCTCAAGAGGGTATTTGGACCTGAGAAGATTCTGTATCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CAA 72 bp | GATTGCCCTGAGAGTTTTGGGCAAATAATTCATTGCTaGCAGGTGGGCGGCCTCAGAGATTCATTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: DCPESFGQIIHC*QVGGLRDSFLF Trigger: GAAAAGGAATGAATCTCTGAGGCCGCCCACCTGCAAGCAATGAATTATTTGCCCAAAACTCTCAGGGCAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CAA 72 bp | AGAGTAATTTGCTCCTGCATCAAAAAGAAACTGAATTaGGGTGCCCATGACGTCCAGAGTTACCTGGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: RVICSCIKKKLN*GAHDVQSYLGL Trigger: GAGCCCCAGGTAACTCTGGACGTCATGGGCACCCAAATTCAGTTTCTTTTTGATGCAGGAGCAAATTACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS GCA 72 bp | ACAAAGTTGCACTTCTATGCAAACGAAGACTTGGCCTaGAGAATTTCCAGACTGCAGCAACCAATCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: TKLHFYANEDLA*RISRLQQPIRD Trigger: GTCTCTGATTGGTTGCTGCAGTCTGGAAATTCTGCAGGCCAAGTCTTCGTTTGCATAGAAGTGCAACTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CAA 72 bp | CCCCTAGGCACACATTCTCTGTCTCAGGGCTGTTCCTaGCTGAGAAAAAGAATTCAGCGATATTTCTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: PLGTHSLSQGCS*LRKRIQRYFSY Trigger: ATAGGAGAAATATCGCTGAATTCTTTTTCTCAGCAAGGAACAGCCCTGAGACAGAGAATGTGTGCCTAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000626729.2 ENST00000656995.1 |
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| CDS CAA 72 bp | TTGCCCATAGTGGAATCAGGTCGAATAGATAGAGAGTaGCCCATAGTGGTCTGGAACAGAGAAGAGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: LPIVESGRIDRE*PIVVWNREEDF Trigger: AAAGTCCTCTTCTCTGTTCCAGACCACTATGGGCAACTCTCTATCTATTCGACCTGATTCCACTATGGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS CAA 90 bp | TCCTTTGCCCAATGTCTTCTTTTCTTGCATTTGAAGCAAGAGCCTTaGCTGGCATTATCTTTATGGCCCTTCGGGTTTCCCTTAGACACT | + |
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Preference number: 6 (lower is better) Translates to: SFAQCLLFLHLKQEP*LALSLWPFGFPLDT Trigger: AGTGTCTAAGGGAAACCCGAAGGGCCATAAAGATAATGCCAGCAAAGGCTCTTGCTTCAAATGCAAGAAAAGAAGACATTGGGCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS TCA 72 bp | GTGAAGTTACAAAGGTCACACGCCTATGCAAACATCTaGTTGGTTGCAGAAAGCAACCAATCAGAGGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: VKLQRSHAYANI*LVAESNQSEAK Trigger: CTTAGCCTCTGATTGGTTGCTTTCTGCAACCAATCAGATGTTTGCATAGGCGTGTGACCTTTGTAACTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS GCA 72 bp | ATTTGCTTTAGAAAGAAGAGAAATATGGCTCTGTTCTaGCCGGCCCATAGGCAGCCAGACGTTAAGATTATC | + |
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Preference number: 6 (lower is better) Translates to: ICFRKKRNMALF*PAHRQPDVKII Trigger: GATAATCTTAACGTCTGGCTGCCTATGGGCCGGGCAGAACAGAGCCATATTTCTCTTCTTTCTAAAGCAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626729.2 ENST00000656995.1 |
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| CDS GCA 72 bp | GTACATATGGGACTTCTGACCATCTTCCCAGCCTCTTaGAAAGTAGGTCTAATTGCAGGATGGTGTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: VHMGLLTIFPAS*KVGLIAGWCHN Trigger: ATTATGACACCATCCTGCAATTAGACCTACTTTGCAAGAGGCTGGGAAGATGGTCAGAAGTCCCATATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS CCA 72 bp | TCTCTCCATGATAGATCAGAGGCTAAGGTCAAACGCTaGAACCCATCTGCAAGTTTCTTAGGATTCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLHDRSEAKVKR*NPSASFLGFSE Trigger: TTCTGAGAATCCTAAGAAACTTGCAGATGGGTTCCAGCGTTTGACCTTAGCCTCTGATCTATCATGGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CCA 72 bp | CATTTGAAGCAAGAGCCTTTGCTGGCATTATCTTTATaGCCCTTCGGGTTTCCCTTAGACACTCTTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: HLKQEPLLALSL*PFGFPLDTLCT Trigger: TGTACAAAGAGTGTCTAAGGGAAACCCGAAGGGCCATAAAGATAATGCCAGCAAAGGCTCTTGCTTCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CAA 72 bp | GAAGTTACAAAGTTGCACTTCTATGCAAACGAAGACTaGGCCTGCAGAATTTCCAGACTGCAGCAACCAATC | + |
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Preference number: 6 (lower is better) Translates to: EVTKLHFYANED*ACRISRLQQPI Trigger: GATTGGTTGCTGCAGTCTGGAAATTCTGCAGGCCAAGTCTTCGTTTGCATAGAAGTGCAACTTTGTAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CAA 72 bp | CAATGTCTTCTTTTCTTGCATTTGAAGCAAGAGCCTTaGCTGGCATTATCTTTATGGCCCTTCGGGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: QCLLFLHLKQEP*LALSLWPFGFP Trigger: GGGAAACCCGAAGGGCCATAAAGATAATGCCAGCAAAGGCTCTTGCTTCAAATGCAAGAAAAGAAGACATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS TCA 72 bp | GACTTCCCACAACACTCCACCACTGAGGACCTACTATaGACTTTCCTTAAGGTTTTTCTATCCCACTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: DFPQHSTTEDLL*TFLKVFLSHLK Trigger: CTTTAAGTGGGATAGAAAAACCTTAAGGAAAGTTCATAGTAGGTCCTCAGTGGTGGAGTGTTGTGGGAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626729.2 ENST00000656995.1 |
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| CDS TCA 72 bp | TATAAATGGGGGAATGAGACAGCAAACAAACAAACGTaGTCCTTCCTGATAGTGGTAAATGTGGGATGCCGA | + |
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Preference number: 6 (lower is better) Translates to: YKWGNETANKQT*SFLIVVNVGCR Trigger: TCGGCATCCCACATTTACCACTATCAGGAAGGATCACGTTTGTTTGTTTGCTGTCTCATTCCCCCATTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625254.1 |
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| CDS GCA 72 bp | ATGCAAACGAAGACTTGGCCTGCAGAATTTCCAGACTaGAGCAACCAATCAGAGACTGAAGTGAAATTACAA | + |
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Preference number: 6 (lower is better) Translates to: MQTKTWPAEFPD*SNQSETEVKLQ Trigger: TTGTAATTTCACTTCAGTCTCTGATTGGTTGCTGCAGTCTGGAAATTCTGCAGGCCAAGTCTTCGTTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CCA 72 bp | AAGTTACAAAGTTGCACTTCTATGCAAACGAAGACTTaGCCTGCAGAATTTCCAGACTGCAGCAACCAATCA | + |
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Preference number: 6 (lower is better) Translates to: KLQSCTSMQTKT*PAEFPDCSNQS Trigger: TGATTGGTTGCTGCAGTCTGGAAATTCTGCAGGCCAAGTCTTCGTTTGCATAGAAGTGCAACTTTGTAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CCA 72 bp | ATCATTAAAAAGTCAGGAAACAGGCTGGTGAGGCTGTaGAGAAGTAGGAACATTTTTACACTGTTGGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: IIKKSGNRLVRL*RSRNIFTLLVG Trigger: TCCCACCAACAGTGTAAAAATGTTCCTACTTCTCCACAGCCTCACCAGCCTGTTTCCTGACTTTTTAATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS CAA 72 bp | TATGTTTACTGCAACACTATTTACCATGGCAAAGACTaGGAACCAACCCAAATGCCCATCAGTGATAGACGG | + |
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Preference number: 6 (lower is better) Translates to: YVYCNTIYHGKD*EPTQMPISDRR Trigger: CCGTCTATCACTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCCATGGTAAATAGTGTTGCAGTAAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS TCA 72 bp | TTGAACAAAGAATTGAACAAAACGCACCCATGTAAATaGAGTGGTGGCCTGCAATCAGAGGCTAAAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LNKELNKTHPCK*SGGLQSEAKVK Trigger: CTTCACTTTAGCCTCTGATTGCAGGCCACCACTTCATTTACATGGGTGCGTTTTGTTCAATTCTTTGTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 72 bp | GTGATCCCCATAAGTCTTTATGTGAGACAGAGGGACTaGTGGTTTTTCTTCCGTAACTTCTTTATGCTGACT | + |
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Preference number: 6 (lower is better) Translates to: VIPISLYVRQRD*WFFFRNFFMLT Trigger: AGTCAGCATAAAGAAGTTACGGAAGAAAAACCATCAGTCCCTCTGTCTCACATAAAGACTTATGGGGATCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 72 bp | GTGATTCCTCAGGGATCTAGAACCAGAAATACCATTTaGCCCAGCAATCCCATTACTGGATATATACCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VIPQGSRTRNTI*PSNPITGYIPK Trigger: TTTGGGTATATATCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTGGTTCTAGATCCCTGAGGAATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS GCA 72 bp | CAGACGTTAAGATTATCTCCCTTGTTCCTTGAACGTTaGTGTTATCCTGTTCTTAAGGTGCCCAGATTTGAT | + |
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Preference number: 6 (lower is better) Translates to: QTLRLSPLFLER*CYPVLKVPRFD Trigger: ATCAAATCTGGGCACCTTAAGAACAGGATAACAGCAACGTTCAAGGAACAAGGGAGATAATCTTAACGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626729.2 ENST00000656995.1 |
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| CDS GCA 72 bp | CTATTTACCATGGCAAAGACTTGGAACCAACCCAAATaGCCATCAGTGATAGACGGGATAAAGAAAATATGG | + |
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Preference number: 6 (lower is better) Translates to: LFTMAKTWNQPK*PSVIDGIKKIW Trigger: CCATATTTTCTTTATCCCGTCTATCACTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCCATGGTAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS GCA 72 bp | ACGCCTTACTGCATAAGCAGTAAGAACAGAGTAATTTaGTCCTGCATCAAAAAGAAACTGAATTTGGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: TPYCISSKNRVI*SCIKKKLNLGA Trigger: GGCACCCAAATTCAGTTTCTTTTTGATGCAGGAGCAAATTACTCTGTTCTTACTGCTTATGCAGTAAGGCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CAA 72 bp | CCTGCCATAAAACATGGCTGGATTTTCCTCCTTGCCTaGTGTAACCTCCCTTACTTTATCATAATTTACTGC | + |
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Preference number: 6 (lower is better) Translates to: PAIKHGWIFLLA*CNLPYFIIIYC Trigger: GCAGTAAATTATGATAAAGTAAGGGAGGTTACACAAGGCAAGGAGGAAAATCCAGCCATGTTTTATGGCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CAA 90 bp | ATGCACATGTATGTTTACTGCAACACTATTTACCATGGCAAAGACTaGGAACCAACCCAAATGCCCATCAGTGATAGACGGGATAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: MHMYVYCNTIYHGKD*EPTQMPISDRRDKE Trigger: TTCTTTATCCCGTCTATCACTGATGGGCATTTGGGTTGGTTCCAAGTCTTTGCCATGGTAAATAGTGTTGCAGTAAACATACATGTGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS TCA 72 bp | GATTGGTTGCAGAAAGCAACCAATCAGAGGCTAAGATaGAGTTACAAAGTTGCACTTCTATGCAAACGAAGA | + |
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Preference number: 6 (lower is better) Translates to: DWLQKATNQRLR*SYKVALLCKRR Trigger: TCTTCGTTTGCATAGAAGTGCAACTTTGTAACTTCATCTTAGCCTCTGATTGGTTGCTTTCTGCAACCAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS TCA 72 bp | ATTCCTTTTCTGAGGGTGTGTAACAGGTTGCTAGAATaGATTGAACATCTCTCCATGATAGATCAGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: IPFLRVCNRLLE*IEHLSMIDQRL Trigger: TAGCCTCTGATCTATCATGGAGAGATGTTCAATTCATTCTAGCAACCTGTTACACACCCTCAGAAAAGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS CAA 72 bp | GCAGATTGGCTAATGAAATGCTGTGCTATTAATATTTaGCCTTCGGGAGAGGAAGGGTCCAGATTAGTATAT | + |
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Preference number: 6 (lower is better) Translates to: ADWLMKCCAINI*PSGEEGSRLVY Trigger: ATATACTAATCTGGACCCTTCCTCTCCCGAAGGCAAAATATTAATAGCACAGCATTTCATTAGCCAATCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625287.1 |
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| CDS TCA 72 bp | GGGTCCTTTTCTATTTTCCCTAAGTGTTGGCTGGTCTaGGAAATAAAGGGAAAGAGTACAAAGAGAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: GSFSIFPKCWLV*EIKGKSTKREI Trigger: AATTTCTCTCTTTGTACTCTTTCCCTTTATTTCTCAGACCAGCCAACACTTAGGGAAAATAGAAAAGGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626729.2 |
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| CDS TCA 72 bp | TGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGGTaGTTCCTCAGGGATCTAGAACCAGAAATACCATTT | + |
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Preference number: 6 (lower is better) Translates to: CKLVQPLWKTVW*FLRDLEPEIPF Trigger: AAATGGTATTTCTGGTTCTAGATCCCTGAGGAATCACCACACTGTCTTCCACAATGGTTGAACTAATTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625287.1 ENST00000626729.2 |
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| CDS CAA 90 bp | AATTGGACAAAACGCACAGTAAAGCTGGGTATACTGTACTTTTATTaGCTATATCCGACAATCTTATACAGAAGTCGTCATGGGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: NWTKRTVKLGILYFY*LYPTILYRSRHGKL Trigger: GAGTTTCCCATGACGACTTCTGTATAAGATTGTCGGATATAGCAAATAAAAGTACAGTATACCCAGCTTTACTGTGCGTTTTGTCCAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625254.1 |
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| CDS CAA 90 bp | GAACAAAGAATTGAACAAAACGCACTGGGTATACTGTACTTTTATTaGCTATATCCGACAATCTTATACAGAAGTCGTCATGGGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: EQRIEQNALGILYFY*LYPTILYRSRHGKL Trigger: GAGTTTCCCATGACGACTTCTGTATAAGATTGTCGGATATAGCAAATAAAAGTACAGTATACCCAGTGCGTTTTGTTCAATTCTTTGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625369.2 |
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| CDS CAA 72 bp | AAACGCACAGTAAAGCTGGGTATACTGTACTTTTATTaGCTATATCCGACAATCTTATACAGAAGTCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: KRTVKLGILYFY*LYPTILYRSRH Trigger: ATGACGACTTCTGTATAAGATTGTCGGATATAGCAAATAAAAGTACAGTATACCCAGCTTTACTGTGCGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625254.1 |
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| CDS TCA 72 bp | AGTGAAATTACAAAGTTACACTCCAATGCAAACATCTaGTTGGTTGCAGAAAACAATCAATCAGAGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: SEITKLHSNANI*LVAENNQSEVL Trigger: AAGTACCTCTGATTGATTGTTTTCTGCAACCAATCAGATGTTTGCATTGGAGTGTAACTTTGTAATTTCACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS GCA 72 bp | TACAAAGTTACACTCCAATGCAAACATCTGATTGGTTaGAGAAAACAATCAATCAGAGGTACTTTCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: YKVTLQCKHLIG*RKQSIRGTFNF Trigger: GAAATTGAAAGTACCTCTGATTGATTGTTTTCTGCAACCAATCAGATGTTTGCATTGGAGTGTAACTTTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630421.2 |
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| CDS CAA 72 bp | ATTGAACAAAACGCACTGGGTATACTGTACTTTTATTaGCTATATCCGACAATCTTATACAGAAGTCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: IEQNALGILYFY*LYPTILYRSRH Trigger: ATGACGACTTCTGTATAAGATTGTCGGATATAGCAAATAAAAGTACAGTATACCCAGTGCGTTTTGTTCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625369.2 |
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