Pregenerated sensors for LINC01231 (Homo sapiens)
Ensembl gene IDs: ENSG00000236511Ensembl transcript IDs: ENST00000452746.1, ENST00000654614.1, ENST00000657258.1, ENST00000659476.1, ENST00000663825.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCGCGCTCTCCAAACTTGTGTGCTCAGGGCTGCCGCCCCGCTGGGTaGCTGGGCCCATCTGCGCGTCTACGGGGCGCTCCTGTGCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: ARSPNLCAQGCRPAG*LGPSARLRGAPVRR Trigger: CCTCCGCACAGGAGCGCCCCGTAGACGCGCAGATGGGCCCAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGTTTGGAGAGCGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS CCA 90 bp | CCTCGCGCGCTCTCCAAACTTGTGTGCTCAGGGCTGCCGCCCCGCTaGGTGGCTGGGCCCATCTGCGCGTCTACGGGGCGCTCCTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: PRALSKLVCSGLPPR*VAGPICASTGRSCA Trigger: CGCACAGGAGCGCCCCGTAGACGCGCAGATGGGCCCAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGTTTGGAGAGCGCGCGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS CCA 90 bp | GCTCTCCAAACTTGTGTGCTCAGGGCTGCCGCCCCGCTGGGTGGCTaGGCCCATCTGCGCGTCTACGGGGCGCTCCTGTGCGGAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: ALQTCVLRAAAPLGG*AHLRVYGALLCGGW Trigger: CCACCCTCCGCACAGGAGCGCCCCGTAGACGCGCAGATGGGCCCAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGTTTGGAGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS CCA 90 bp | GGCTGGGCCCATCTGCGCGTCTACGGGGCGCTCCTGTGCGGAGGGTaGGGAGTTGCAGCTTTCCAGCGTGCCCTCCAGGGGGATGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GWAHLRVYGALLCGG*GVAAFQRALQGDEG Trigger: TCCCTCATCCCCCTGGAGGGCACGCTGGAAAGCTGCAACTCCCCACCCTCCGCACAGGAGCGCCCCGTAGACGCGCAGATGGGCCCAGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000452746.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS GCA 90 bp | ACTTTCAGGTGCCTCGCGCGCTCTCCAAACTTGTGTGCTCAGGGCTaGCGCCCCGCTGGGTGGCTGGGCCCATCTGCGCGTCTACGGGGC | + |
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Preference number: 5 (lower is better) Translates to: TFRCLARSPNLCAQG*RPAGWLGPSARLRG Trigger: GCCCCGTAGACGCGCAGATGGGCCCAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGTTTGGAGAGCGCGCGAGGCACCTGAAAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS GCA 90 bp | CCACACCCGCAGAGCGGTCCCAGCGAACAGCAGGTGTCACCCTTTTaGTTCCAAACCCCAACCACTTTCAGGTGCCTCGCGCGCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PHPQSGPSEQQVSPF*FQTPTTFRCLARSP Trigger: TGGAGAGCGCGCGAGGCACCTGAAAGTGGTTGGGGTTTGGAAGCAAAAGGGTGACACCTGCTGTTCGCTGGGACCGCTCTGCGGGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS TCA 90 bp | AGCAGGTGCCAGCAGAAGTCACCGGGCGTCTCGGAGGTCGAAGACTaGACTTGCAACGGGAGCTGGGGAAGGTGGTGCGCGCTTCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: SRCQQKSPGVSEVED*TCNGSWGRWCALPN Trigger: ATTTGGAAGCGCGCACCACCTTCCCCAGCTCCCGTTGCAAGTTCAGTCTTCGACCTCCGAGACGCCCGGTGACTTCTGCTGGCACCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657258.1 ENST00000663825.1 |
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| CDS GCA 90 bp | CAGCAGGTGTCACCCTTTTGCTTCCAAACCCCAACCACTTTCAGGTaGCTCGCGCGCTCTCCAAACTTGTGTGCTCAGGGCTGCCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: QQVSPFCFQTPTTFR*LARSPNLCAQGCRP Trigger: GGGGCGGCAGCCCTGAGCACACAAGTTTGGAGAGCGCGCGAGGCACCTGAAAGTGGTTGGGGTTTGGAAGCAAAAGGGTGACACCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CCA 90 bp | CTAGGCGTCAGCAGCCAGCAGCACTCGCTGTCAGGAAAGAGCACGTaGCAGAACCTAAGCTGGTGCTTCCTCAACTCCCAAGGCCAATGT | + |
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Preference number: 5 (lower is better) Translates to: LGVSSQQHSLSGKST*QNLSWCFLNSQGQC Trigger: ACATTGGCCTTGGGAGTTGAGGAAGCACCAGCTTAGGTTCTGCCACGTGCTCTTTCCTGACAGCGAGTGCTGCTGGCTGCTGACGCCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS GCA 90 bp | CTCACACTTGGGTGCCAGTTGCGCCAGAATCACACCAAGAGCGAGTaGCCACTCACCAAGCAGAGCTCAGGCAAAGGACGTTTCCAAACC | + |
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Preference number: 5 (lower is better) Translates to: LTLGCQLRQNHTKSE*PLTKQSSGKGRFQT Trigger: GGTTTGGAAACGTCCTTTGCCTGAGCTCTGCTTGGTGAGTGGGCACTCGCTCTTGGTGTGATTCTGGCGCAACTGGCACCCAAGTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS TCA 90 bp | GCGGGCTTTCCTATCACGTTGCTGCTGCTCTCTCGACCCTGTCAGTaGGGAAAGAACTCAGCACTTAGGACTGCTGCTCACACTTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: AGFPITLLLLSRPCQ*GKNSALRTAAHTWV Trigger: CACCCAAGTGTGAGCAGCAGTCCTAAGTGCTGAGTTCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 90 bp | AGTGAGGAAAGAACTCAGCACTTAGGACTGCTGCTCACACTTGGGTaGCAGTTGCGCCAGAATCACACCAAGAGCGAGTGCCCACTCACC | + |
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Preference number: 5 (lower is better) Translates to: SEERTQHLGLLLTLG*QLRQNHTKSECPLT Trigger: GGTGAGTGGGCACTCGCTCTTGGTGTGATTCTGGCGCAACTGGCACCCAAGTGTGAGCAGCAGTCCTAAGTGCTGAGTTCTTTCCTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 90 bp | TGGGCCCAGCCAGTTGACAAATGTCTGCGGGCTTTCCTATCACGTTaGTGCTGCTCTCTCGACCCTGTCAGTGAGGAAAGAACTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: WAQPVDKCLRAFLSR*CCSLDPVSEERTQH Trigger: GTGCTGAGTTCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTGGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CCA 90 bp | GCCGAGAGACTATGCTGGGTAGCTGCTAGAGATCGGCATCAACTTTaGGACAAGAGTCCCTGGCTCTGCTGGCCCACTTCTAGGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: AERLCWVAARDRHQL*DKSPWLCWPTSREM Trigger: CATTTCCCTAGAAGTGGGCCAGCAGAGCCAGGGACTCTTGTCCCAAAGTTGATGCCGATCTCTAGCAGCTACCCAGCATAGTCTCTCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 90 bp | CAGCACTCGCTGTCAGGAAAGAGCACGTGGCAGAACCTAAGCTGGTaGTTCCTCAACTCCCAAGGCCAATGTGGTAAACCATCCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: QHSLSGKSTWQNLSW*FLNSQGQCGKPSCT Trigger: TGTGCAGGATGGTTTACCACATTGGCCTTGGGAGTTGAGGAAGCACCAGCTTAGGTTCTGCCACGTGCTCTTTCCTGACAGCGAGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS GCA 90 bp | GCCCAGCCAGTTGACAAATGTCTGCGGGCTTTCCTATCACGTTGCTaGTGCTCTCTCGACCCTGTCAGTGAGGAAAGAACTCAGCACTTA | + |
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Preference number: 5 (lower is better) Translates to: AQPVDKCLRAFLSRC*CSLDPVSEERTQHL Trigger: TAAGTGCTGAGTTCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 90 bp | GGAAGACGAATATGGTCTTTTGGGCCCAGCCAGTTGACAAATGTCTaGGGGCTTTCCTATCACGTTGCTGCTGCTCTCTCGACCCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: GRRIWSFGPSQLTNV*GLSYHVAAALSTLS Trigger: TGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTGGGCCCAAAAGACCATATTCGTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 90 bp | GCTGCTAGAGATCGGCATCAACTTTGGGACAAGAGTCCCTGGCTCTaGTGGCCCACTTCTAGGGAAATGGTTCACAATACAGCAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: AARDRHQLWDKSPWL*WPTSREMVHNTAAS Trigger: ACTCGCTGCTGTATTGTGAACCATTTCCCTAGAAGTGGGCCAGCAGAGCCAGGGACTCTTGTCCCAAAGTTGATGCCGATCTCTAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS TCA 90 bp | AGCAGCCGGTGTGGATATTTTGCTCTTACAGCGCCTTCAGCAATCTaGCCGAGGGTCTCGCATCGTGTCAATATTGTGTTCTGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSRCGYFALTAPSAI*PRVSHRVNIVFCWW Trigger: CCACCAGCAGAACACAATATTGACACGATGCGAGACCCTCGGTCAGATTGCTGAAGGCGCTGTAAGAGCAAAATATCCACACCGGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS GCA 90 bp | CAGCCAGTTGACAAATGTCTGCGGGCTTTCCTATCACGTTGCTGCTaGTCTCTCGACCCTGTCAGTGAGGAAAGAACTCAGCACTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: QPVDKCLRAFLSRCC*SLDPVSEERTQHLG Trigger: TCCTAAGTGCTGAGTTCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 90 bp | CCAGGAAGAAGGAATGCTACACAGAGAGGCCAGGAAGAATCTGAATaGACAGTCCTTGCTGGGATACTCCCCTCAGTCTATTACCACGAG | + |
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Preference number: 5 (lower is better) Translates to: PGRRNATQRGQEESE*TVLAGILPSVYYHE Trigger: CTCGTGGTAATAGACTGAGGGGAGTATCCCAGCAAGGACTGTGCATTCAGATTCTTCCTGGCCTCTCTGTGTAGCATTCCTTCTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS CCA 90 bp | GCTAGAGATCGGCATCAACTTTGGGACAAGAGTCCCTGGCTCTGCTaGCCCACTTCTAGGGAAATGGTTCACAATACAGCAGCGAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: ARDRHQLWDKSPWLC*PTSREMVHNTAASK Trigger: TTTACTCGCTGCTGTATTGTGAACCATTTCCCTAGAAGTGGGCCAGCAGAGCCAGGGACTCTTGTCCCAAAGTTGATGCCGATCTCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CCA 90 bp | AGCGAGGGATCAACGGGTTCTGTGACTGGCCAAAGAGCATCCATGTaGGAAGGTCACAGAAGTAGGCTCAGAAGAAAAGTCTCTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SEGSTGSVTGQRASM*EGHRSRLRRKVSFS Trigger: AGAGAAAGAGACTTTTCTTCTGAGCCTACTTCTGTGACCTTCCCACATGGATGCTCTTTGGCCAGTCACAGAACCCGTTGATCCCTCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS CCA 90 bp | TTTGGGACAAGAGTCCCTGGCTCTGCTGGCCCACTTCTAGGGAAATaGTTCACAATACAGCAGCGAGTAAACCTTCAATCCCAAGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: FGTRVPGSAGPLLGK*FTIQQRVNLQSQVK Trigger: CTTAACTTGGGATTGAAGGTTTACTCGCTGCTGTATTGTGAACCATTTCCCTAGAAGTGGGCCAGCAGAGCCAGGGACTCTTGTCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CCA 90 bp | CTCACTGTAGTAATAATCGCTATGGAGTTCTCTGGAGACCACACCTaGCTGGCTGTGTTGAGTTCTGAGCCTCTCAATTGCATGCAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LTVVIIAMEFSGDHT*LAVLSSEPLNCMQE Trigger: CTCTTGCATGCAATTGAGAGGCTCAGAACTCAACACAGCCAGCCAGGTGTGGTCTCCAGAGAACTCCATAGCGATTATTACTACAGTGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS TCA 90 bp | AGGCTCTGGCTGGTCACCAGATTTAGCACAGATTTAGAACAGCACTaGTTTAGAAAGTCAGGTGAAAGCCCATCAGGAGCTGTCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: RLWLVTRFSTDLEQH*FRKSGESPSGAVTA Trigger: AGCAGTGACAGCTCCTGATGGGCTTTCACCTGACTTTCTAAATCAGTGCTGTTCTAAATCTGTGCTAAATCTGGTGACCAGCCAGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS TCA 90 bp | CCGCTTTGCTGGTCATGCTCAGAGGGTGGAAGGTGTTTTATGGGGTaGCTTCTGACTGCTTGCTTTCTCTTTATTACAATATGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PLCWSCSEGGRCFMG*LLTACFLFITIWPP Trigger: AGGAGGCCATATTGTAATAAAGAGAAAGCAAGCAGTCAGAAGTCACCCCATAAAACACCTTCCACCCTCTGAGCATGACCAGCAAAGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654614.1 ENST00000659476.1 |
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| CDS CCA 90 bp | CATAACTGTTTGTGGATGTTCATCAGAATGGAATGCACTTTGAGCTaGGCTGATGCAGTGTCCGCAAGAAGAAACCGCTTTGCTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: HNCLWMFIRMECTLS*ADAVSARRNRFAGH Trigger: ATGACCAGCAAAGCGGTTTCTTCTTGCGGACACTGCATCAGCCCAGCTCAAAGTGCATTCCATTCTGATGAACATCCACAAACAGTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654614.1 ENST00000659476.1 |
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| CDS TCA 90 bp | TTCTTCATAACTGTTTGTGGATGTTCATCAGAATGGAATGCACTTTaGGCTGGGCTGATGCAGTGTCCGCAAGAAGAAACCGCTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FFITVCGCSSEWNAL*AGLMQCPQEETALL Trigger: CAGCAAAGCGGTTTCTTCTTGCGGACACTGCATCAGCCCAGCTCAAAGTGCATTCCATTCTGATGAACATCCACAAACAGTTATGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654614.1 |
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| CDS TCA 90 bp | GACAATAAATATCGGTCAAGTGCTATTTTAAACACTTGGCCGACTTaGCAGGTAACTGTTGACTCCCTGAGATTGCATGATGGCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: DNKYRSSAILNTWPT*QVTVDSLRLHDGRN Trigger: GTTCCTGCCATCATGCAATCTCAGGGAGTCAACAGTTACCTGTCAAGTCGGCCAAGTGTTTAAAATAGCACTTGACCGATATTTATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS TCA 90 bp | GGAAATAGCTATTCAAAGGTCAATTCCCAGTGCCATATGCTTCTCTaGATAGTCATCACTGCTTCATCTGTGTTGAGGAAGAGGAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: GNSYSKVNSQCHMLL*IVITASSVLRKRSV Trigger: AACACTCCTCTTCCTCAACACAGATGAAGCAGTGATGACTATTCAGAGAAGCATATGGCACTGGGAATTGACCTTTGAATAGCTATTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS CCA 90 bp | AATTTGCTGCAGATACTTACTGACAGCTGTGGTGAACACCTATGGTaGAGCCCAAGCACAGGTTTGGTTTTATTTTTAAAGCTTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: NLLQILTDSCGEHLW*SPSTGLVLFLKLSK Trigger: CTTGGAAAGCTTTAAAAATAAAACCAAACCTGTGCTTGGGCTCCACCATAGGTGTTCACCACAGCTGTCAGTAAGTATCTGCAGCAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CCA 90 bp | TCTAATTTGCTGCAGATACTTACTGACAGCTGTGGTGAACACCTATaGTGGAGCCCAAGCACAGGTTTGGTTTTATTTTTAAAGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SNLLQILTDSCGEHL*WSPSTGLVLFLKLS Trigger: GGAAAGCTTTAAAAATAAAACCAAACCTGTGCTTGGGCTCCACCATAGGTGTTCACCACAGCTGTCAGTAAGTATCTGCAGCAAATTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS TCA 90 bp | AGTGTGGAAAGAGAATGGAATTTCGAGTCTAAGATTTCCAGTTTTTaGGCACTGACTCTGCTGACTTACGGCTCATTAATCCCCTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: SVEREWNFESKISSF*ALTLLTYGSLIPLY Trigger: ATACAAGGGGATTAATGAGCCGTAAGTCAGCAGAGTCAGTGCTCAAAAACTGGAAATCTTAGACTCGAAATTCCATTCTCTTTCCACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CCA 90 bp | AACCAAGATGCATTGATTTATACTGACAGCTGTGGTGAACACCTATaGTGGAGCCCAAGCACAGGTTTGGTTTTATTTTTAAAGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: NQDALIYTDSCGEHL*WSPSTGLVLFLKLS Trigger: GGAAAGCTTTAAAAATAAAACCAAACCTGTGCTTGGGCTCCACCATAGGTGTTCACCACAGCTGTCAGTATAAATCAATGCATCTTGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CCA 90 bp | GGTCATTCTTCATTGAACCTAAGCATAAAAATAGACAGTATTCCCTaGGTCTTTGGGTCTTCATTTCTGAAGTTTCCCATGTCAAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: GHSSLNLSIKIDSIP*VFGSSFLKFPMSSE Trigger: TTCACTTGACATGGGAAACTTCAGAAATGAAGACCCAAAGACCCAGGGAATACTGTCTATTTTTATGCTTAGGTTCAATGAAGAATGACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS CCA 72 bp | GGGGAGGCACTGCTAGGGCTCAGGAGCAGAGGCGCTTaGACCATGGCTGCGACCCCGGCTCCGGCCCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GEALLGLRSRGA*TMAATPAPARV Trigger: GACCCGGGCCGGAGCCGGGGTCGCAGCCATGGTCCAAGCGCCTCTGCTCCTGAGCCCTAGCAGTGCCTCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657258.1 ENST00000663825.1 |
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| CDS CAA 72 bp | GGGGGAGGCACTGCTAGGGCTCAGGAGCAGAGGCGCTaGGACCATGGCTGCGACCCCGGCTCCGGCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: GGGTARAQEQRR*DHGCDPGSGPG Trigger: ACCCGGGCCGGAGCCGGGGTCGCAGCCATGGTCCAAGCGCCTCTGCTCCTGAGCCCTAGCAGTGCCTCCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657258.1 ENST00000663825.1 |
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| CDS CCA 72 bp | ACTTGTGTGCTCAGGGCTGCCGCCCCGCTGGGTGGCTaGGCCCATCTGCGCGTCTACGGGGCGCTCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TCVLRAAAPLGG*AHLRVYGALLC Trigger: GCACAGGAGCGCCCCGTAGACGCGCAGATGGGCCCAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS CCA 72 bp | CCAAACTTGTGTGCTCAGGGCTGCCGCCCCGCTGGGTaGCTGGGCCCATCTGCGCGTCTACGGGGCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PNLCAQGCRPAG*LGPSARLRGAP Trigger: AGGAGCGCCCCGTAGACGCGCAGATGGGCCCAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGTTTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS CCA 72 bp | CTCTCCAAACTTGTGTGCTCAGGGCTGCCGCCCCGCTaGGTGGCTGGGCCCATCTGCGCGTCTACGGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LSKLVCSGLPPR*VAGPICASTGR Trigger: GCGCCCCGTAGACGCGCAGATGGGCCCAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGTTTGGAGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS CCA 72 bp | CATCTGCGCGTCTACGGGGCGCTCCTGTGCGGAGGGTaGGGAGTTGCAGCTTTCCAGCGTGCCCTCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HLRVYGALLCGG*GVAAFQRALQG Trigger: CCCCTGGAGGGCACGCTGGAAAGCTGCAACTCCCCACCCTCCGCACAGGAGCGCCCCGTAGACGCGCAGATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452746.1 ENST00000657258.1 ENST00000663825.1 |
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| CDS GCA 72 bp | GGGGAAGGTGGTGCGCGCTTCCAAATCCCTCCCCCTTaGCCCAGCAGTTTCTCGGTGCCCAGAGCAGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: GEGGARFQIPPP*PSSFSVPRAAR Trigger: CCGCGCTGCTCTGGGCACCGAGAAACTGCTGGGGCAAGGGGGAGGGATTTGGAAGCGCGCACCACCTTCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657258.1 ENST00000663825.1 |
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| CDS CAA 72 bp | CCAACCACTTTCAGGTGCCTCGCGCGCTCTCCAAACTaGTGTGCTCAGGGCTGCCGCCCCGCTGGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PTTFRCLARSPN*CAQGCRPAGWL Trigger: CAGCCACCCAGCGGGGCGGCAGCCCTGAGCACACAAGTTTGGAGAGCGCGCGAGGCACCTGAAAGTGGTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS TCA 72 bp | CAGCAGAAGTCACCGGGCGTCTCGGAGGTCGAAGACTaGACTTGCAACGGGAGCTGGGGAAGGTGGTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: QQKSPGVSEVED*TCNGSWGRWCA Trigger: CGCGCACCACCTTCCCCAGCTCCCGTTGCAAGTTCAGTCTTCGACCTCCGAGACGCCCGGTGACTTCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657258.1 ENST00000663825.1 |
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| CDS CAA 72 bp | GAAGTCACCGGGCGTCTCGGAGGTCGAAGACTGAACTaGCAACGGGAGCTGGGGAAGGTGGTGCGCGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EVTGRLGGRRLN*QRELGKVVRAS Trigger: GGAAGCGCGCACCACCTTCCCCAGCTCCCGTTGCAAGTTCAGTCTTCGACCTCCGAGACGCCCGGTGACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657258.1 ENST00000663825.1 |
||
| CDS CAA 90 bp | CCCACACCCGCAGAGCGGTCCCAGCGAACAGCAGGTGTCACCCTTTaGCTTCCAAACCCCAACCACTTTCAGGTGCCTCGCGCGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTPAERSQRTAGVTL*LPNPNHFQVPRALS Trigger: GGAGAGCGCGCGAGGCACCTGAAAGTGGTTGGGGTTTGGAAGCAAAAGGGTGACACCTGCTGTTCGCTGGGACCGCTCTGCGGGTGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CAA 90 bp | GTGCCAGCAGAAGTCACCGGGCGTCTCGGAGGTCGAAGACTGAACTaGCAACGGGAGCTGGGGAAGGTGGTGCGCGCTTCCAAATCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPAEVTGRLGGRRLN*QRELGKVVRASKSL Trigger: GAGGGATTTGGAAGCGCGCACCACCTTCCCCAGCTCCCGTTGCAAGTTCAGTCTTCGACCTCCGAGACGCCCGGTGACTTCTGCTGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657258.1 ENST00000663825.1 |
||
| CDS TCA 72 bp | CCGCGCGCCTGCAGTACAGTGTGCAACTGCGCTTTGTaGCGGAGGAGCAGCTCTTTCGGCCTGGACAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRACSTVCNCAL*RRSSSFGLDSS Trigger: AGAACTGTCCAGGCCGAAAGAGCTGCTCCTCCGTCACAAAGCGCAGTTGCACACTGTACTGCAGGCGCGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS GCA 72 bp | CAGAGCGGTCCCAGCGAACAGCAGGTGTCACCCTTTTaGTTCCAAACCCCAACCACTTTCAGGTGCCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: QSGPSEQQVSPF*FQTPTTFRCLA Trigger: CGCGAGGCACCTGAAAGTGGTTGGGGTTTGGAAGCAAAAGGGTGACACCTGCTGTTCGCTGGGACCGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS GCA 72 bp | GGGTGCCAGTTGCGCCAGAATCACACCAAGAGCGAGTaGCCACTCACCAAGCAGAGCTCAGGCAAAGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: GCQLRQNHTKSE*PLTKQSSGKGR Trigger: ACGTCCTTTGCCTGAGCTCTGCTTGGTGAGTGGGCACTCGCTCTTGGTGTGATTCTGGCGCAACTGGCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
||
| CDS CAA 72 bp | GCAGAGCGGTCCCAGCGAACAGCAGGTGTCACCCTTTaGCTTCCAAACCCCAACCACTTTCAGGTGCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: AERSQRTAGVTL*LPNPNHFQVPR Trigger: GCGAGGCACCTGAAAGTGGTTGGGGTTTGGAAGCAAAAGGGTGACACCTGCTGTTCGCTGGGACCGCTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CAA 72 bp | CAGCACTTAGGACTGCTGCTCACACTTGGGTGCCAGTaGCGCCAGAATCACACCAAGAGCGAGTGCCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: QHLGLLLTLGCQ*RQNHTKSECPL Trigger: GAGTGGGCACTCGCTCTTGGTGTGATTCTGGCGCAACTGGCACCCAAGTGTGAGCAGCAGTCCTAAGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
||
| CDS GCA 72 bp | TCACCCTTTTGCTTCCAAACCCCAACCACTTTCAGGTaGCTCGCGCGCTCTCCAAACTTGTGTGCTCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPFCFQTPTTFR*LARSPNLCAQG Trigger: GCCCTGAGCACACAAGTTTGGAGAGCGCGCGAGGCACCTGAAAGTGGTTGGGGTTTGGAAGCAAAAGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000657258.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CCA 72 bp | AGCAGCCAGCAGCACTCGCTGTCAGGAAAGAGCACGTaGCAGAACCTAAGCTGGTGCTTCCTCAACTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSQQHSLSGKST*QNLSWCFLNSQ Trigger: TTGGGAGTTGAGGAAGCACCAGCTTAGGTTCTGCCACGTGCTCTTTCCTGACAGCGAGTGCTGCTGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CAA 90 bp | GAAAGAACTCAGCACTTAGGACTGCTGCTCACACTTGGGTGCCAGTaGCGCCAGAATCACACCAAGAGCGAGTGCCCACTCACCAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ERTQHLGLLLTLGCQ*RQNHTKSECPLTKQ Trigger: CTGCTTGGTGAGTGGGCACTCGCTCTTGGTGTGATTCTGGCGCAACTGGCACCCAAGTGTGAGCAGCAGTCCTAAGTGCTGAGTTCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 72 bp | AGAACTCAGCACTTAGGACTGCTGCTCACACTTGGGTaGCAGTTGCGCCAGAATCACACCAAGAGCGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RTQHLGLLLTLG*QLRQNHTKSEC Trigger: GCACTCGCTCTTGGTGTGATTCTGGCGCAACTGGCACCCAAGTGTGAGCAGCAGTCCTAAGTGCTGAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
||
| CDS CCA 72 bp | GCTGATGATGTCAGTAGAGCTGTCCCAGGTAGTCTCTaGCACCCAGGTTCAAGCAGAGCTCAGGCAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ADDVSRAVPGSL*HPGSSRAQAKD Trigger: GTCCTTTGCCTGAGCTCTGCTTGAACCTGGGTGCCAGAGACTACCTGGGACAGCTCTACTGACATCATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452746.1 |
||
| CDS CCA 72 bp | CTATGCTGGGTAGCTGCTAGAGATCGGCATCAACTTTaGGACAAGAGTCCCTGGCTCTGCTGGCCCACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LCWVAARDRHQL*DKSPWLCWPTS Trigger: AGAAGTGGGCCAGCAGAGCCAGGGACTCTTGTCCCAAAGTTGATGCCGATCTCTAGCAGCTACCCAGCATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
||
| CDS CAA 90 bp | CAGCGCCTTCAGCAATCTGACCGAGGGTCTCGCATCGTGTCAATATaGTGTTCTGCTGGTGGTTTGTATCCTCTTCTCCCTCCCCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: QRLQQSDRGSRIVSI*CSAGGLYPLLPPPT Trigger: GGTTGGGGGAGGGAGAAGAGGATACAAACCACCAGCAGAACACAATATTGACACGATGCGAGACCCTCGGTCAGATTGCTGAAGGCGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657258.1 |
||
| CDS TCA 72 bp | CCTATCACGTTGCTGCTGCTCTCTCGACCCTGTCAGTaGGGAAAGAACTCAGCACTTAGGACTGCTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PITLLLLSRPCQ*GKNSALRTAAH Trigger: GTGAGCAGCAGTCCTAAGTGCTGAGTTCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS TCA 72 bp | TGGAGTTCTCTGGAGACCACACCTGGCTGGCTGTGTTaGGTTCTGAGCCTCTCAATTGCATGCAAGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WSSLETTPGWLC*VLSLSIACKRL Trigger: CAGCCTCTTGCATGCAATTGAGAGGCTCAGAACTCAACACAGCCAGCCAGGTGTGGTCTCCAGAGAACTCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS GCA 72 bp | GCACCTCACCTTTTCATAAGCTTCACTCCTACTCCATaGAGGGGTGACCAGGCTCTGGCTGGTCACCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: APHLFISFTPTP*RGDQALAGHQI Trigger: AATCTGGTGACCAGCCAGAGCCTGGTCACCCCTGCATGGAGTAGGAGTGAAGCTTATGAAAAGGTGAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CAA 72 bp | GATGCTAGACCACAGGGCAACTGCACAGGTGCTCGATaGAATGGGGAACCAAGGTCTGTGACAAAGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DARPQGNCTGAR*NGEPRSVTKAA Trigger: AGCTGCCTTTGTCACAGACCTTGGTTCCCCATTCAATCGAGCACCTGTGCAGTTGCCCTGTGGTCTAGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS TCA 72 bp | CTCTGGAGACCACACCTGGCTGGCTGTGTTGAGTTCTaGGCCTCTCAATTGCATGCAAGAGGCTGGAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LWRPHLAGCVEF*ASQLHARGWKD Trigger: ATCTTTCCAGCCTCTTGCATGCAATTGAGAGGCTCAGAACTCAACACAGCCAGCCAGGTGTGGTCTCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
||
| CDS GCA 72 bp | CTGTCAGGAAAGAGCACGTGGCAGAACCTAAGCTGGTaGTTCCTCAACTCCCAAGGCCAATGTGGTAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LSGKSTWQNLSW*FLNSQGQCGKP Trigger: TGGTTTACCACATTGGCCTTGGGAGTTGAGGAAGCACCAGCTTAGGTTCTGCCACGTGCTCTTTCCTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS GCA 72 bp | GACAAATGTCTGCGGGCTTTCCTATCACGTTGCTGCTaGTCTCTCGACCCTGTCAGTGAGGAAAGAACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DKCLRAFLSRCC*SLDPVSEERTQ Trigger: CTGAGTTCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
||
| CDS GCA 72 bp | CCAGTTGACAAATGTCTGCGGGCTTTCCTATCACGTTaGTGCTGCTCTCTCGACCCTGTCAGTGAGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PVDKCLRAFLSR*CCSLDPVSEER Trigger: TCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 72 bp | ATATGGTCTTTTGGGCCCAGCCAGTTGACAAATGTCTaGGGGCTTTCCTATCACGTTGCTGCTGCTCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: IWSFGPSQLTNV*GLSYHVAAALS Trigger: CGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTGGGCCCAAAAGACCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CCA 72 bp | TCGCTGTCAGGAAAGAGCACGTGGCAGAACCTAAGCTaGTGCTTCCTCAACTCCCAAGGCCAATGTGGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLSGKSTWQNLS*CFLNSQGQCGK Trigger: TTTACCACATTGGCCTTGGGAGTTGAGGAAGCACCAGCTTAGGTTCTGCCACGTGCTCTTTCCTGACAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CCA 72 bp | GCTTCACTCCTACTCCATGCAGGGGTGACCAGGCTCTaGCTGGTCACCAGATTTAGCACAGATTTAGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: ASLLLHAGVTRL*LVTRFSTDLEQ Trigger: CTGTTCTAAATCTGTGCTAAATCTGGTGACCAGCCAGAGCCTGGTCACCCCTGCATGGAGTAGGAGTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CCA 72 bp | CGGCATCAACTTTGGGACAAGAGTCCCTGGCTCTGCTaGCCCACTTCTAGGGAAATGGTTCACAATACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RHQLWDKSPWLC*PTSREMVHNTA Trigger: TGCTGTATTGTGAACCATTTCCCTAGAAGTGGGCCAGCAGAGCCAGGGACTCTTGTCCCAAAGTTGATGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CCA 72 bp | CCGAGGGTCTCGCATCGTGTCAATATTGTGTTCTGCTaGTGGTTTGTATCCTCTTCTCCCTCCCCCAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: PRVSHRVNIVFC*WFVSSSPSPNQ Trigger: TTGGTTGGGGGAGGGAGAAGAGGATACAAACCACCAGCAGAACACAATATTGACACGATGCGAGACCCTCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CAA 72 bp | ATGGAGTTCTCTGGAGACCACACCTGGCTGGCTGTGTaGAGTTCTGAGCCTCTCAATTGCATGCAAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MEFSGDHTWLAV*SSEPLNCMQEA Trigger: AGCCTCTTGCATGCAATTGAGAGGCTCAGAACTCAACACAGCCAGCCAGGTGTGGTCTCCAGAGAACTCCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS GCA 72 bp | GTTGACAAATGTCTGCGGGCTTTCCTATCACGTTGCTaGTGCTCTCTCGACCCTGTCAGTGAGGAAAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: VDKCLRAFLSRC*CSLDPVSEERT Trigger: AGTTCTTTCCTCACTGACAGGGTCGAGAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS GCA 72 bp | GATCGGCATCAACTTTGGGACAAGAGTCCCTGGCTCTaGTGGCCCACTTCTAGGGAAATGGTTCACAATACA | + |
|
Preference number: 6 (lower is better) Translates to: DRHQLWDKSPWL*WPTSREMVHNT Trigger: TGTATTGTGAACCATTTCCCTAGAAGTGGGCCAGCAGAGCCAGGGACTCTTGTCCCAAAGTTGATGCCGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CCA 72 bp | AGAGTCCCTGGCTCTGCTGGCCCACTTCTAGGGAAATaGTTCACAATACAGCAGCGAGTAAACCTTCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: RVPGSAGPLLGK*FTIQQRVNLQS Trigger: GGATTGAAGGTTTACTCGCTGCTGTATTGTGAACCATTTCCCTAGAAGTGGGCCAGCAGAGCCAGGGACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CAA 72 bp | CACAGAGAGGCCAGGAAGAATCTGAATGCACAGTCCTaGCTGGGATACTCCCCTCAGTCTATTACCACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HREARKNLNAQS*LGYSPQSITTR Trigger: TCTCGTGGTAATAGACTGAGGGGAGTATCCCAGCAAGGACTGTGCATTCAGATTCTTCCTGGCCTCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS TCA 72 bp | ATGGAAGACGAATATGGTCTTTTGGGCCCAGCCAGTTaGCAAATGTCTGCGGGCTTTCCTATCACGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MEDEYGLLGPAS*QMSAGFPITLL Trigger: CAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTGGGCCCAAAAGACCATATTCGTCTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS TCA 72 bp | AAGAAGGAATGCTACACAGAGAGGCCAGGAAGAATCTaGATGCACAGTCCTTGCTGGGATACTCCCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KKECYTERPGRI*MHSPCWDTPLS Trigger: ACTGAGGGGAGTATCCCAGCAAGGACTGTGCATTCAGATTCTTCCTGGCCTCTCTGTGTAGCATTCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS GCA 72 bp | TTCCTCAACTCCCAAGGCCAATGTGGTAAACCATCCTaGACAAAATACCTCCGCAGGTGTTCAGGACAACTG | + |
|
Preference number: 6 (lower is better) Translates to: FLNSQGQCGKPS*TKYLRRCSGQL Trigger: CAGTTGTCCTGAACACCTGCGGAGGTATTTTGTGCAGGATGGTTTACCACATTGGCCTTGGGAGTTGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654614.1 ENST00000663825.1 |
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| CDS CCA 72 bp | TCAACGGGTTCTGTGACTGGCCAAAGAGCATCCATGTaGGAAGGTCACAGAAGTAGGCTCAGAAGAAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: STGSVTGQRASM*EGHRSRLRRKV Trigger: GACTTTTCTTCTGAGCCTACTTCTGTGACCTTCCCACATGGATGCTCTTTGGCCAGTCACAGAACCCGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS CCA 72 bp | GTAATAATCGCTATGGAGTTCTCTGGAGACCACACCTaGCTGGCTGTGTTGAGTTCTGAGCCTCTCAATTGC | + |
|
Preference number: 6 (lower is better) Translates to: VIIAMEFSGDHT*LAVLSSEPLNC Trigger: GCAATTGAGAGGCTCAGAACTCAACACAGCCAGCCAGGTGTGGTCTCCAGAGAACTCCATAGCGATTATTAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CAA 72 bp | CAGCAATCTGACCGAGGGTCTCGCATCGTGTCAATATaGTGTTCTGCTGGTGGTTTGTATCCTCTTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QQSDRGSRIVSI*CSAGGLYPLLP Trigger: AGGGAGAAGAGGATACAAACCACCAGCAGAACACAATATTGACACGATGCGAGACCCTCGGTCAGATTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS GCA 72 bp | TTCCTCAACTCCCAAGGCCAATGTGGTAAACCATCCTaGACAAAATACCTCCGCAGGTGTTCAGGACAACAT | + |
|
Preference number: 6 (lower is better) Translates to: FLNSQGQCGKPS*TKYLRRCSGQH Trigger: ATGTTGTCCTGAACACCTGCGGAGGTATTTTGTGCAGGATGGTTTACCACATTGGCCTTGGGAGTTGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CAA 72 bp | AATGGAAGACGAATATGGTCTTTTGGGCCCAGCCAGTaGACAAATGTCTGCGGGCTTTCCTATCACGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NGRRIWSFGPSQ*TNVCGLSYHVA Trigger: AGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTGGGCCCAAAAGACCATATTCGTCTTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CAA 72 bp | ACAAAACCTAAAAGGGTCACTCTCTCCCTCCTCTCTTaGCCCTTAAAGACTCATTCCAGAGAGGTCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TKPKRVTLSLLS*PLKTHSREVLP Trigger: GGGAAGGACCTCTCTGGAATGAGTCTTTAAGGGCAAAGAGAGGAGGGAGAGAGTGACCCTTTTAGGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS CAA 90 bp | AAGTTAAGTAATGGAAGACGAATATGGTCTTTTGGGCCCAGCCAGTaGACAAATGTCTGCGGGCTTTCCTATCACGTTGCTGCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KLSNGRRIWSFGPSQ*TNVCGLSYHVAAAL Trigger: GAGAGCAGCAGCAACGTGATAGGAAAGCCCGCAGACATTTGTCAACTGGCTGGGCCCAAAAGACCATATTCGTCTTCCATTACTTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CAA 90 bp | CCTCTTTATTACAATATGGCCTCCTCCGTGTTCTCCTCTGTGTGTTaGGCACCTCACCTTTTCATAAGCTTCACTCCTACTCCATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLYYNMASSVFSSVC*APHLFISFTPTPCR Trigger: CCTGCATGGAGTAGGAGTGAAGCTTATGAAAAGGTGAGGTGCCAAACACACAGAGGAGAACACGGAGGAGGCCATATTGTAATAAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS CAA 90 bp | TCTCTTTATTACAATATGGCCTCCTCCGTGTTCTCCTCTGTGTGTTaGGCACCTCACCTTTTCATAAGCTTCACTCCTACTCCATGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLYYNMASSVFSSVC*APHLFISFTPTPCR Trigger: CCTGCATGGAGTAGGAGTGAAGCTTATGAAAAGGTGAGGTGCCAAACACACAGAGGAGAACACGGAGGAGGCCATATTGTAATAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654614.1 ENST00000659476.1 |
||
| CDS CAA 90 bp | CAAGAGCTAGTAGTCCTCCTGTCTTCTTCCTCTATGGCAAGGGCTTaGAACCATGTGACCTTTAAGATGCCCACTGTTTCTGAAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: QELVVLLSSSSMARA*NHVTFKMPTVSEGS Trigger: AGATCCTTCAGAAACAGTGGGCATCTTAAAGGTCACATGGTTCAAAGCCCTTGCCATAGAGGAAGAAGACAGGAGGACTACTAGCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663825.1 |
||
| CDS CAA 90 bp | CTGCTGCTCTTTCTTCCATTTAGGCTAAGTGCTCACCGATCTAATTaGCTGCAGATACTTACTGACAGCTGTGGTGAACACCTATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLFLPFRLSAHRSN*LQILTDSCGEHLWW Trigger: CCACCATAGGTGTTCACCACAGCTGTCAGTAAGTATCTGCAGCAAATTAGATCGGTGAGCACTTAGCCTAAATGGAAGAAAGAGCAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
||
| CDS TCA 72 bp | TGTGGATATTTTGCTCTTACAGCGCCTTCAGCAATCTaGCCGAGGGTCTCGCATCGTGTCAATATTGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CGYFALTAPSAI*PRVSHRVNIVF Trigger: GAACACAATATTGACACGATGCGAGACCCTCGGTCAGATTGCTGAAGGCGCTGTAAGAGCAAAATATCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657258.1 |
||
| CDS GCA 72 bp | TTCCCAGTGCCATATGCTTCTCTGAATAGTCATCACTaGTTCATCTGTGTTGAGGAAGAGGAGTGTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FPVPYASLNSHH*FICVEEEECCG Trigger: CCCACAACACTCCTCTTCCTCAACACAGATGAAGCAGTGATGACTATTCAGAGAAGCATATGGCACTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663825.1 |
||
| CDS CAA 72 bp | TACAATATGGCCTCCTCCGTGTTCTCCTCTGTGTGTTaGGCACCTCACCTTTTCATAAGCTTCACTCCTACT | + |
|
Preference number: 6 (lower is better) Translates to: YNMASSVFSSVC*APHLFISFTPT Trigger: AGTAGGAGTGAAGCTTATGAAAAGGTGAGGTGCCAAACACACAGAGGAGAACACGGAGGAGGCCATATTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CAA 90 bp | CTTCTTCATAACTGTTTGTGGATGTTCATCAGAATGGAATGCACTTaGAGCTGGGCTGATGCAGTGTCCGCAAGAAGAAACCGCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLHNCLWMFIRMECT*SWADAVSARRNRFA Trigger: AGCAAAGCGGTTTCTTCTTGCGGACACTGCATCAGCCCAGCTCAAAGTGCATTCCATTCTGATGAACATCCACAAACAGTTATGAAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654614.1 |
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| CDS TCA 72 bp | GCTCAGAGGGTGGAAGGTGTTTTATGGGGTGACTTCTaGCTGCTTGCTTTCTCTTTATTACAATATGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: AQRVEGVLWGDF*LLAFSLLQYGL Trigger: GAGGCCATATTGTAATAAAGAGAAAGCAAGCAGTCAGAAGTCACCCCATAAAACACCTTCCACCCTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654614.1 ENST00000659476.1 |
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| CDS GCA 72 bp | CTTCATAACTGTTTGTGGATGTTCATCAGAATGGAATaGACTTTGAGCTGGGCTGATGCAGTGTCCGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: LHNCLWMFIRME*TLSWADAVSAR Trigger: TCTTGCGGACACTGCATCAGCCCAGCTCAAAGTGCATTCCATTCTGATGAACATCCACAAACAGTTATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654614.1 |
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| CDS CAA 72 bp | AACTGTTTGTGGATGTTCATCAGAATGGAATGCACTTaGAGCTGGGCTGATGCAGTGTCCGCAAGAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: NCLWMFIRMECT*SWADAVSARRN Trigger: GTTTCTTCTTGCGGACACTGCATCAGCCCAGCTCAAAGTGCATTCCATTCTGATGAACATCCACAAACAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654614.1 ENST00000659476.1 |
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| CDS CAA 90 bp | ACAAGACTTCCAAGACTGTTCCTTAACTCGAAGGAAGCCCTAGGTTaGTCTTATCCAAGTACATGCTGCTTTTTCTCTTGTGTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: TRLPRLFLNSKEALG*SYPSTCCFFSCVLG Trigger: TCCCAGCACACAAGAGAAAAAGCAGCATGTACTTGGATAAGACAAACCTAGGGCTTCCTTCGAGTTAAGGAACAGTCTTGGAAGTCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000663825.1 |
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| CDS TCA 72 bp | CTGGTCACCAGATTTAGCACAGATTTAGAACAGCACTaGTTTAGAAAGTCAGGTGAAAGCCCATCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LVTRFSTDLEQH*FRKSGESPSGA Trigger: AGCTCCTGATGGGCTTTCACCTGACTTTCTAAATCAGTGCTGTTCTAAATCTGTGCTAAATCTGGTGACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CCA 72 bp | ACCTTCAATCCCAAGTTAAGTAATGGAAGACGAATATaGTCTTTTGGGCCCAGCCAGTTGACAAATGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TFNPKLSNGRRI*SFGPSQLTNVC Trigger: GCAGACATTTGTCAACTGGCTGGGCCCAAAAGACCATATTCGTCTTCCATTACTTAACTTGGGATTGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659476.1 |
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| CDS CCA 72 bp | CTGCAGATACTTACTGACAGCTGTGGTGAACACCTATaGTGGAGCCCAAGCACAGGTTTGGTTTTATTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LQILTDSCGEHL*WSPSTGLVLFL Trigger: TAAAAATAAAACCAAACCTGTGCTTGGGCTCCACCATAGGTGTTCACCACAGCTGTCAGTAAGTATCTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CAA 72 bp | CCAAGACTGTTCCTTAACTCGAAGGAAGCCCTAGGTTaGTCTTATCCAAGTACATGCTGCTTTTTCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PRLFLNSKEALG*SYPSTCCFFSC Trigger: ACAAGAGAAAAAGCAGCATGTACTTGGATAAGACAAACCTAGGGCTTCCTTCGAGTTAAGGAACAGTCTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000663825.1 |
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| CDS CAA 72 bp | TTTCTTCCATTTAGGCTAAGTGCTCACCGATCTAATTaGCTGCAGATACTTACTGACAGCTGTGGTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: FLPFRLSAHRSN*LQILTDSCGEH Trigger: GTGTTCACCACAGCTGTCAGTAAGTATCTGCAGCAAATTAGATCGGTGAGCACTTAGCCTAAATGGAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CAA 72 bp | AAATCAAATGGGATAGTGCACATTAATGCCCAGGACTaGTGGCCTCTAAGGAGCTCTATTTCAGGAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: KSNGIVHINAQD*WPLRSSISGDS Trigger: TGAATCTCCTGAAATAGAGCTCCTTAGAGGCCACAAGTCCTGGGCATTAATGTGCACTATCCCATTTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CCA 72 bp | GCATTGATTTATACTGACAGCTGTGGTGAACACCTATaGTGGAGCCCAAGCACAGGTTTGGTTTTATTTTTA | + |
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Preference number: 6 (lower is better) Translates to: ALIYTDSCGEHL*WSPSTGLVLFL Trigger: TAAAAATAAAACCAAACCTGTGCTTGGGCTCCACCATAGGTGTTCACCACAGCTGTCAGTATAAATCAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000452746.1 ENST00000654614.1 ENST00000659476.1 ENST00000663825.1 |
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| CDS CAA 90 bp | ATAACTTTCGTCCACTTACATTTCTACGTGGCTGGTCATTCTTCATaGAACCTAAGCATAAAAATAGACAGTATTCCCTGGGTCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: ITFVHLHFYVAGHSS*NLSIKIDSIPWVFG Trigger: CCCAAAGACCCAGGGAATACTGTCTATTTTTATGCTTAGGTTCAATGAAGAATGACCAGCCACGTAGAAATGTAAGTGGACGAAAGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS TCA 72 bp | TCTTATAGGAGTGTTGTCTGTGACCCTTATGATGAATaGGGACTTTCCACCCCTGCAATACTGTATGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: SYRSVVCDPYDE*GLSTPAILYEN Trigger: ATTTTCATACAGTATTGCAGGGGTGGAAAGTCCTCATTCATCATAAGGGTCACAGACAACACTCCTATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663825.1 |
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| CDS TCA 72 bp | AGAGAATGGAATTTCGAGTCTAAGATTTCCAGTTTTTaGGCACTGACTCTGCTGACTTACGGCTCATTAATC | + |
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Preference number: 6 (lower is better) Translates to: REWNFESKISSF*ALTLLTYGSLI Trigger: GATTAATGAGCCGTAAGTCAGCAGAGTCAGTGCTCAAAAACTGGAAATCTTAGACTCGAAATTCCATTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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| CDS CAA 72 bp | GATGTGCTAAGGTTTAAGATATCTTTTTCATGTGTGTaGAGACTACTGTTATGCAAAGCAGTCTGGAAAACT | + |
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Preference number: 6 (lower is better) Translates to: DVLRFKISFSCV*RLLLCKAVWKT Trigger: AGTTTTCCAGACTGCTTTGCATAACAGTAGTCTCAACACACATGAAAAAGATATCTTAAACCTTAGCACATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657258.1 |
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