Pregenerated sensors for LINC01227 (Homo sapiens)
Ensembl gene IDs: ENSG00000260737Ensembl transcript IDs: ENST00000561634.6, ENST00000561719.5, ENST00000562002.6, ENST00000565215.2, ENST00000567317.6, ENST00000652792.1, ENST00000654679.1, ENST00000654863.1, ENST00000656480.1, ENST00000660108.1, ENST00000662243.1, ENST00000663234.1, ENST00000663414.1, ENST00000664145.1, ENST00000666768.1, ENST00000670104.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGGTCTGCAACTCTGCTCCTGCCTCACAGCCAGGGATGGAGGGATaGTGCTGGGGCCACAGGAACTCTGAGTCATCGCCGGGGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: QVCNSAPASQPGMEG*CWGHRNSESSPGMA Trigger: TGCCATCCCCGGCGATGACTCAGAGTTCCTGTGGCCCCAGCATCATCCCTCCATCCCTGGCTGTGAGGCAGGAGCAGAGTTGCAGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS GCA 90 bp | CAGGAACCCTGCCACCACCATGTCCTCCCATGCACGATTGCCACCTaGAAGGTCCGTCTCCCATATTGGGCTTTGAGCCTTTCCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: QEPCHHHVLPCTIAT*KVRLPYWALSLSRP Trigger: TGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGGGAGGACATGGTGGTGGCAGGGTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS GCA 90 bp | CCACAGTCAGGAACCCTGCCACCACCATGTCCTCCCATGCACGATTaGCACCTGCAAGGTCCGTCTCCCATATTGGGCTTTGAGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PQSGTLPPPCPPMHD*HLQGPSPILGFEPF Trigger: GAAAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGGGAGGACATGGTGGTGGCAGGGTTCCTGACTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS CCA 90 bp | AAAGGACCTGCATTACTGGGGATTCACACCACCCTCCCCTCACCCTaGACACCCTACCATGATGGCTCAGGTCACAGACTAGACTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: KGPALLGIHTTLPSP*TPYHDGSGHRLDWA Trigger: GGCCCAGTCTAGTCTGTGACCTGAGCCATCATGGTAGGGTGTCCAGGGTGAGGGGAGGGTGGTGTGAATCCCCAGTAATGCAGGTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000562002.6 ENST00000565215.2 ENST00000654863.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS GCA 90 bp | TATATCAAACAAATTCAAGGCCTCTCAGGTCTGCAACTCTGCTCCTaGCTCACAGCCAGGGATGGAGGGATGATGCTGGGGCCACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: YIKQIQGLSGLQLCS*LTARDGGMMLGPQE Trigger: TTCCTGTGGCCCCAGCATCATCCCTCCATCCCTGGCTGTGAGGCAGGAGCAGAGTTGCAGACCTGAGAGGCCTTGAATTTGTTTGATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS GCA 90 bp | AAGTCCTATATCAAACAAATTCAAGGCCTCTCAGGTCTGCAACTCTaGTCCTGCCTCACAGCCAGGGATGGAGGGATGATGCTGGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: KSYIKQIQGLSGLQL*SCLTARDGGMMLGP Trigger: TGGCCCCAGCATCATCCCTCCATCCCTGGCTGTGAGGCAGGAGCAGAGTTGCAGACCTGAGAGGCCTTGAATTTGTTTGATATAGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS CCA 90 bp | GAGGCCAGGCCAAGCCAGACCTCACAGGCAAAGCACTTTGTCTGGTaGCAAAGTCCTATATCAAACAAATTCAAGGCCTCTCAGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: EARPSQTSQAKHFVW*QSPISNKFKASQVC Trigger: GCAGACCTGAGAGGCCTTGAATTTGTTTGATATAGGACTTTGCCACCAGACAAAGTGCTTTGCCTGTGAGGTCTGGCTTGGCCTGGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS CCA 90 bp | TCAGAGGCCAGGCCAAGCCAGACCTCACAGGCAAAGCACTTTGTCTaGTGGCAAAGTCCTATATCAAACAAATTCAAGGCCTCTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SEARPSQTSQAKHFV*WQSPISNKFKASQV Trigger: GACCTGAGAGGCCTTGAATTTGTTTGATATAGGACTTTGCCACCAGACAAAGTGCTTTGCCTGTGAGGTCTGGCTTGGCCTGGCCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS TCA 90 bp | CATGCACGATTGCCACCTGCAAGGTCCGTCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: HARLPPARSVSHIGL*AFPGQDPNLDSSSK Trigger: CTTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS TCA 90 bp | GGGAGAAGAACGAAGATAAGAGTGAGACCCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: GRRTKIRVRPSHIGL*AFPGQDPNLDSSSK Trigger: CTTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGGTCTCACTCTTATCTTCGTTCTTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS GCA 90 bp | GACATACGTTCCCCTTTGTTTCTGCTCAGAATCACTGGAAGACAATaGCCAGTGATGATGGGTTTTCTACCTCCCATATTGGGCTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: DIRSPLFLLRITGRQ*PVMMGFLPPILGFE Trigger: CTCAAAGCCCAATATGGGAGGTAGAAAACCCATCATCACTGGGCATTGTCTTCCAGTGATTCTGAGCAGAAACAAAGGGGAACGTATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS TCA 90 bp | ACGTTCCCCTTTGTTTCTGCTCAGAATCACTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: TFPFVSAQNHSHIGL*AFPGQDPNLDSSSK Trigger: CTTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGTGATTCTGAGCAGAAACAAAGGGGAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000567317.6 ENST00000654863.1 ENST00000670104.1 |
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| CDS TCA 90 bp | ACAATGCCCAGTGATGATGGGTTTTCTACCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: TMPSDDGFSTSHIGL*AFPGQDPNLDSSSK Trigger: CTTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAGAAAACCCATCATCACTGGGCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS GCA 90 bp | CATCATTACGTAGGTCAGAAATTATATTTGCCTCTTCACTGTCTCTaGCTCTTAACTGGTCTCCCTACGGTTCCTCTTGGCCTGTTACTC | + |
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Preference number: 5 (lower is better) Translates to: HHYVGQKLYLPLHCL*LLTGLPTVPLGLLL Trigger: GAGTAACAGGCCAAGAGGAACCGTAGGGAGACCAGTTAAGAGGCAGAGACAGTGAAGAGGCAAATATAATTTCTGACCTACGTAATGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS GCA 90 bp | AAAAGTGAGCCACAGAGAAATTGTGTGATTGGCGTCTGGGACGTCTaGCTTCAGAATTCTCAACCAATCTTCATTACCACATCTGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KSEPQRNCVIGVWDV*LQNSQPIFITTSAL Trigger: CAAGGCAGATGTGGTAATGAAGATTGGTTGAGAATTCTGAAGGCAGACGTCCCAGACGCCAATCACACAATTTCTCTGTGGCTCACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS CCA 90 bp | GAGACCCCATCGTTATATGGATTCTACATTTCTTACCTCCCATATTaGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATC | + |
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Preference number: 5 (lower is better) Translates to: ETPSLYGFYISYLPY*ALSLSRPGSKFGFI Trigger: GATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAAGAAATGTAGAATCCATATAACGATGGGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656480.1 ENST00000662243.1 |
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| CDS TCA 90 bp | TTTCTTCTTGGAAAAGACTCCATCTCTTTGCTCGCTGAGTCACAATaGAGACATACGTTCCCCTTTGTTTCTGCTCAGAATCACTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: FLLGKDSISLLAESQ*RHTFPFVSAQNHSH Trigger: ATGGGAGTGATTCTGAGCAGAAACAAAGGGGAACGTATGTCTTCATTGTGACTCAGCGAGCAAAGAGATGGAGTCTTTTCCAAGAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000567317.6 ENST00000654863.1 ENST00000670104.1 |
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| CDS TCA 90 bp | TTTCTTCTTGGAAAAGACTCCATCTCTTTGCTCGCTGAGTCACAATaGAGACATACGTTCCCCTTTGTTTCTGCTCAGAATCACTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: FLLGKDSISLLAESQ*RHTFPFVSAQNHWK Trigger: CTTCCAGTGATTCTGAGCAGAAACAAAGGGGAACGTATGTCTTCATTGTGACTCAGCGAGCAAAGAGATGGAGTCTTTTCCAAGAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS CCA 90 bp | ACAGATAAGAAAAGTGAGCCACAGAGAAATTGTGTGATTGGCGTCTaGGACGTCTGCCTTCAGAATTCTCAACCAATCTTCATTACCACA | + |
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Preference number: 5 (lower is better) Translates to: TDKKSEPQRNCVIGV*DVCLQNSQPIFITT Trigger: TGTGGTAATGAAGATTGGTTGAGAATTCTGAAGGCAGACGTCCCAGACGCCAATCACACAATTTCTCTGTGGCTCACTTTTCTTATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS TCA 90 bp | TTCCAACATAAACAAGGTCTTGCTAGAATCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: FQHKQGLARISHIGL*AFPGQDPNLDSSSK Trigger: CTTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGATTCTAGCAAGACCTTGTTTATGTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652792.1 ENST00000663414.1 ENST00000666768.1 |
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| CDS TCA 72 bp | TCACACCACCCTCCCCTCACCCTGGACACCCTACCATaGTGGCTCAGGTCACAGACTAGACTGGGCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SHHPPLTLDTLP*WLRSQTRLGPS Trigger: AGAGGGGCCCAGTCTAGTCTGTGACCTGAGCCATCATGGTAGGGTGTCCAGGGTGAGGGGAGGGTGGTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000562002.6 ENST00000565215.2 ENST00000654863.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS GCA 72 bp | GGAACCCTGCCACCACCATGTCCTCCCATGCACGATTaGCACCTGCAAGGTCCGTCTCCCATATTGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: GTLPPPCPPMHD*HLQGPSPILGF Trigger: AAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGGGAGGACATGGTGGTGGCAGGGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS GCA 72 bp | CACAGTCAGGAACCCTGCCACCACCATGTCCTCCCATaGACGATTGCCACCTGCAAGGTCCGTCTCCCATAT | + |
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Preference number: 6 (lower is better) Translates to: HSQEPCHHHVLP*TIATCKVRLPY Trigger: ATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGGGAGGACATGGTGGTGGCAGGGTTCCTGACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS CCA 72 bp | ACACCCTACCATGATGGCTCAGGTCACAGACTAGACTaGGCCCCTCTGCCAGCCTTCCCCCGACTTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: TPYHDGSGHRLD*APLPAFPRLHN Trigger: ATTGTGAAGTCGGGGGAAGGCTGGCAGAGGGGCCCAGTCTAGTCTGTGACCTGAGCCATCATGGTAGGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000565215.2 ENST00000666768.1 |
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| CDS CAA 72 bp | AGGAACCCTGCCACCACCATGTCCTCCCATGCACGATaGCCACCTGCAAGGTCCGTCTCCCATATTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: RNPATTMSSHAR*PPARSVSHIGL Trigger: AAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGGGAGGACATGGTGGTGGCAGGGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS GCA 72 bp | TGCCACCACCATGTCCTCCCATGCACGATTGCCACCTaGAAGGTCCGTCTCCCATATTGGGCTTTGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: CHHHVLPCTIAT*KVRLPYWALSL Trigger: AAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGGGAGGACATGGTGGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS GCA 72 bp | ATCAAACAAATTCAAGGCCTCTCAGGTCTGCAACTCTaGTCCTGCCTCACAGCCAGGGATGGAGGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: IKQIQGLSGLQL*SCLTARDGGMM Trigger: CATCATCCCTCCATCCCTGGCTGTGAGGCAGGAGCAGAGTTGCAGACCTGAGAGGCCTTGAATTTGTTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS CAA 90 bp | TGTCCTCCCATGCACGATTGCCACCTGCAAGGTCCGTCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: CPPMHDCHLQGPSPI*GFEPFQARIQIWIH Trigger: ATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGGGAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS TCA 72 bp | TTGCCACCTGCAAGGTCCGTCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: LPPARSVSHIGL*AFPGQDPNLDS Trigger: TGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS CAA 72 bp | TTACACAGCTGGGACTCTAGGGGACTTAGAAGCCCATaGTCTTTATATCTGCTGCTGGGAGGGCAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LHSWDSRGLRSP*SLYLLLGGQTA Trigger: TGCTGTCTGCCCTCCCAGCAGCAGATATAAAGACAATGGGCTTCTAAGTCCCCTAGAGTCCCAGCTGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS CAA 72 bp | ATTGCCACCTGCAAGGTCCGTCTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: IATCKVRLPYWA*SLSRPGSKFGF Trigger: GAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS CAA 90 bp | CTTTCTCAGAGGCCAGGCCAAGCCAGACCTCACAGGCAAAGCACTTaGTCTGGTGGCAAAGTCCTATATCAAACAAATTCAAGGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSQRPGQARPHRQST*SGGKVLYQTNSRPL Trigger: GAGAGGCCTTGAATTTGTTTGATATAGGACTTTGCCACCAGACAAAGTGCTTTGCCTGTGAGGTCTGGCTTGGCCTGGCCTCTGAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS CAA 90 bp | CCATGCACGATTGCCACCTGCAAGGTCCGTCTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: PCTIATCKVRLPYWA*SLSRPGSKFGFIFK Trigger: TTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGACGGACCTTGCAGGTGGCAATCGTGCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660108.1 ENST00000663234.1 |
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| CDS TCA 72 bp | AAGAGACCAGTGGTTTTCTCTGAGCCAGGCTTTACTTaGGAAGGAAAGCCTTTCCAGGAACCTCTGGCTACA | + |
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Preference number: 6 (lower is better) Translates to: KRPVVFSEPGFT*EGKPFQEPLAT Trigger: TGTAGCCAGAGGTTCCTGGAAAGGCTTTCCTTCTCAAGTAAAGCCTGGCTCAGAGAAAACCACTGGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000660108.1 ENST00000662243.1 ENST00000663414.1 |
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| CDS GCA 72 bp | TCCCTACGGTTCCTCTTGGCCTGTTACTCCATTCTCTaGACAGTAGACAACGTGGGCTTCATAAAACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLRFLLACYSIL*TVDNVGFIKPS Trigger: AGAAGGTTTTATGAAGCCCACGTTGTCTACTGTGCAGAGAATGGAGTAACAGGCCAAGAGGAACCGTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS CCA 72 bp | AGGCCAAGCCAGACCTCACAGGCAAAGCACTTTGTCTaGTGGCAAAGTCCTATATCAAACAAATTCAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RPSQTSQAKHFV*WQSPISNKFKA Trigger: GGCCTTGAATTTGTTTGATATAGGACTTTGCCACCAGACAAAGTGCTTTGCCTGTGAGGTCTGGCTTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS CAA 72 bp | AGGCCAGGCCAAGCCAGACCTCACAGGCAAAGCACTTaGTCTGGTGGCAAAGTCCTATATCAAACAAATTCA | + |
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Preference number: 6 (lower is better) Translates to: RPGQARPHRQST*SGGKVLYQTNS Trigger: TGAATTTGTTTGATATAGGACTTTGCCACCAGACAAAGTGCTTTGCCTGTGAGGTCTGGCTTGGCCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000567317.6 ENST00000652792.1 ENST00000654679.1 ENST00000654863.1 ENST00000656480.1 ENST00000660108.1 ENST00000662243.1 ENST00000663234.1 ENST00000663414.1 ENST00000664145.1 ENST00000666768.1 ENST00000670104.1 |
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| CDS CAA 72 bp | CGTTCCCCTTTGTTTCTGCTCAGAATCACTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: RSPLFLLRITPI*GFEPFQARIQI Trigger: AATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGTGATTCTGAGCAGAAACAAAGGGGAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000567317.6 ENST00000654863.1 ENST00000670104.1 |
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| CDS CAA 72 bp | CAATGCCCAGTGATGATGGGTTTTCTACCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: QCPVMMGFLPPI*GFEPFQARIQI Trigger: AATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAGAAAACCCATCATCACTGGGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS CAA 90 bp | GGGGAGAAGAACGAAGATAAGAGTGAGACCCTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GEKNEDKSETLPYWA*SLSRPGSKFGFIFK Trigger: TTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGGTCTCACTCTTATCTTCGTTCTTCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS CAA 90 bp | CAGTGGGCCAAATATGTCAGTGGTCCCAAATCTCCCACTTTCTTCTaGGAAAAGACTCCATCTCTTTGCTCGCTGAGTCACAATGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: QWAKYVSGPKSPTFF*EKTPSLCSLSHNED Trigger: GTCTTCATTGTGACTCAGCGAGCAAAGAGATGGAGTCTTTTCCAAGAAGAAAGTGGGAGATTTGGGACCACTGACATATTTGGCCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000567317.6 ENST00000654679.1 ENST00000654863.1 ENST00000664145.1 ENST00000670104.1 |
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| CDS CAA 90 bp | ACTGGAAGACAATGCCCAGTGATGATGGGTTTTCTACCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: TGRQCPVMMGFLPPI*GFEPFQARIQIWIH Trigger: ATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAGAAAACCCATCATCACTGGGCATTGTCTTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS TCA 72 bp | ACGAAGATAAGAGTGAGACCCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: TKIRVRPSHIGL*AFPGQDPNLDS Trigger: TGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGGTCTCACTCTTATCTTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS GCA 72 bp | GTAGGTCAGAAATTATATTTGCCTCTTCACTGTCTCTaGCTCTTAACTGGTCTCCCTACGGTTCCTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VGQKLYLPLHCL*LLTGLPTVPLG Trigger: GCCAAGAGGAACCGTAGGGAGACCAGTTAAGAGGCAGAGACAGTGAAGAGGCAAATATAATTTCTGACCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS CAA 72 bp | AACGAAGATAAGAGTGAGACCCTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: NEDKSETLPYWA*SLSRPGSKFGF Trigger: GAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGGTCTCACTCTTATCTTCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS CAA 90 bp | GAAGACATACGTTCCCCTTTGTTTCTGCTCAGAATCACTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: EDIRSPLFLLRITPI*GFEPFQARIQIWIH Trigger: ATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGTGATTCTGAGCAGAAACAAAGGGGAACGTATGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000567317.6 ENST00000654863.1 ENST00000670104.1 |
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| CDS TCA 72 bp | GTTTCACATTTGTATCCAGGCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: VSHLYPGSHIGL*AFPGQDPNLDS Trigger: TGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGCCTGGATACAAATGTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 |
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| CDS TCA 72 bp | AGTGATGATGGGTTTTCTACCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: SDDGFSTSHIGL*AFPGQDPNLDS Trigger: TGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAGAAAACCCATCATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS GCA 72 bp | CCACAGAGAAATTGTGTGATTGGCGTCTGGGACGTCTaGCTTCAGAATTCTCAACCAATCTTCATTACCACA | + |
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Preference number: 6 (lower is better) Translates to: PQRNCVIGVWDV*LQNSQPIFITT Trigger: TGTGGTAATGAAGATTGGTTGAGAATTCTGAAGGCAGACGTCCCAGACGCCAATCACACAATTTCTCTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS GCA 72 bp | TCCCCTTTGTTTCTGCTCAGAATCACTGGAAGACAATaGCCAGTGATGATGGGTTTTCTACCTCCCATATTG | + |
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Preference number: 6 (lower is better) Translates to: SPLFLLRITGRQ*PVMMGFLPPIL Trigger: CAATATGGGAGGTAGAAAACCCATCATCACTGGGCATTGTCTTCCAGTGATTCTGAGCAGAAACAAAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS CCA 72 bp | AAAAGTGAGCCACAGAGAAATTGTGTGATTGGCGTCTaGGACGTCTGCCTTCAGAATTCTCAACCAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSEPQRNCVIGV*DVCLQNSQPIF Trigger: GAAGATTGGTTGAGAATTCTGAAGGCAGACGTCCCAGACGCCAATCACACAATTTCTCTGTGGCTCACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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| CDS CCA 72 bp | AGACATACGTTCCCCTTTGTTTCTGCTCAGAATCACTaGAAGACAATGCCCAGTGATGATGGGTTTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: RHTFPFVSAQNH*KTMPSDDGFST Trigger: GGTAGAAAACCCATCATCACTGGGCATTGTCTTCCAGTGATTCTGAGCAGAAACAAAGGGGAACGTATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654679.1 ENST00000664145.1 |
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| CDS CAA 72 bp | AGTTTCACATTTGTATCCAGGCTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: SFTFVSRLPYWA*SLSRPGSKFGF Trigger: GAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGCCTGGATACAAATGTGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 |
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| CDS CAA 72 bp | CTTTGTTTCTGCTCAGAATCACTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: LCFCSESLPYWA*SLSRPGSKFGF Trigger: GAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGTGATTCTGAGCAGAAACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000567317.6 ENST00000654863.1 ENST00000670104.1 |
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| CDS CAA 90 bp | TACGTTCCCCTTTGTTTCTGCTCAGAATCACTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: YVPLCFCSESLPYWA*SLSRPGSKFGFIFK Trigger: TTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGTGATTCTGAGCAGAAACAAAGGGGAACGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000567317.6 ENST00000654863.1 ENST00000670104.1 |
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| CDS CAA 90 bp | GGAGACCCCATCGTTATATGGATTCTACATTTCTTACCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: GDPIVIWILHFLPPI*GFEPFQARIQIWIH Trigger: ATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAAGAAATGTAGAATCCATATAACGATGGGGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656480.1 ENST00000662243.1 |
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| CDS TCA 72 bp | TTTGTTTCTGCTCAGAATCACTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: FVSAQNHSHIGL*AFPGQDPNLDS Trigger: TGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGTGATTCTGAGCAGAAACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000567317.6 ENST00000654863.1 ENST00000670104.1 |
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| CDS TCA 72 bp | GGAAAAGACTCCATCTCTTTGCTCGCTGAGTCACAATaGAGACATACGTTCCCCTTTGTTTCTGCTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GKDSISLLAESQ*RHTFPFVSAQN Trigger: ATTCTGAGCAGAAACAAAGGGGAACGTATGTCTTCATTGTGACTCAGCGAGCAAAGAGATGGAGTCTTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000567317.6 ENST00000654679.1 ENST00000654863.1 ENST00000664145.1 ENST00000670104.1 |
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| CDS TCA 72 bp | AAACAAGGTCTTGCTAGAATCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: KQGLARISHIGL*AFPGQDPNLDS Trigger: TGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGATTCTAGCAAGACCTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652792.1 ENST00000663414.1 ENST00000666768.1 |
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| CDS TCA 72 bp | AGCCAGAAGTCAGATCTAAAGGTGAACTTGAGGTGGTaGAACTACCTTGGAATTCACAGGAATTGCAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: SQKSDLKVNLRW*NYLGIHRNCSY Trigger: GTAGCTGCAATTCCTGTGAATTCCAAGGTAGTTTCACCACCTCAAGTTCACCTTTAGATCTGACTTCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656480.1 ENST00000662243.1 |
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| CDS GCA 72 bp | GGTATGCATATGCATGCCCAAACCTTTAGCCAAGTCTaGTGTGGAAACAAAGGTCTTGTGTACACAGATTTG | + |
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Preference number: 6 (lower is better) Translates to: GMHMHAQTFSQV*CGNKGLVYTDL Trigger: CAAATCTGTGTACACAAGACCTTTGTTTCCACAGCAGACTTGGCTAAAGGTTTGGGCATGCATATGCATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 ENST00000656480.1 ENST00000662243.1 |
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| CDS CAA 72 bp | TCCAACATAAACAAGGTCTTGCTAGAATCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: SNINKVLLESPI*GFEPFQARIQI Trigger: AATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGATTCTAGCAAGACCTTGTTTATGTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652792.1 ENST00000663414.1 ENST00000666768.1 |
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| CDS TCA 72 bp | CTTTCTTCTTGGAAAAGACTCCATCTCTTTGCTCGCTaGGTCACAATGAAGACATACGTTCCCCTTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LSSWKRLHLFAR*VTMKTYVPLCF Trigger: GAAACAAAGGGGAACGTATGTCTTCATTGTGACTCAGCGAGCAAAGAGATGGAGTCTTTTCCAAGAAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000567317.6 ENST00000654679.1 ENST00000654863.1 ENST00000664145.1 ENST00000670104.1 |
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| CDS TCA 72 bp | ATGGATTCTACATTTCTTACCTCCCATATTGGGCTTTaGGCCTTTCCAGGCCAGGATCCAAATTTGGATTCA | + |
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Preference number: 6 (lower is better) Translates to: MDSTFLTSHIGL*AFPGQDPNLDS Trigger: TGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAAGAAATGTAGAATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656480.1 ENST00000662243.1 |
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| CDS CAA 72 bp | TATGGATTCTACATTTCTTACCTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTC | + |
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Preference number: 6 (lower is better) Translates to: YGFYISYLPYWA*SLSRPGSKFGF Trigger: GAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAAGAAATGTAGAATCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656480.1 ENST00000662243.1 |
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| CDS CAA 90 bp | CTAACAGTTTCCAACATAAACAAGGTCTTGCTAGAATCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: LTVSNINKVLLESPI*GFEPFQARIQIWIH Trigger: ATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGATTCTAGCAAGACCTTGTTTATGTTGGAAACTGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000652792.1 ENST00000663414.1 ENST00000666768.1 |
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| CDS CAA 72 bp | ATCGTTATATGGATTCTACATTTCTTACCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: IVIWILHFLPPI*GFEPFQARIQI Trigger: AATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGGTAAGAAATGTAGAATCCATATAACGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656480.1 ENST00000662243.1 |
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| CDS CAA 90 bp | AAGAAGATAAGTTTCACATTTGTATCCAGGCTCCCATATTGGGCTTaGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KKISFTFVSRLPYWA*SLSRPGSKFGFIFK Trigger: TTTGAAGATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGCCTGGATACAAATGTGAAACTTATCTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 |
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| CDS CCA 72 bp | AGATCTAAAGGTGAACTTGAGGTGGTGAAACTACCTTaGAATTCACAGGAATTGCAGCTACTCATAACTAGA | + |
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Preference number: 6 (lower is better) Translates to: RSKGELEVVKLP*NSQELQLLITR Trigger: TCTAGTTATGAGTAGCTGCAATTCCTGTGAATTCCAAGGTAGTTTCACCACCTCAAGTTCACCTTTAGATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656480.1 ENST00000662243.1 |
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| CDS CAA 90 bp | TTAATAAAAGAAGATAAGTTTCACATTTGTATCCAGGCTCCCATATaGGGCTTTGAGCCTTTCCAGGCCAGGATCCAAATTTGGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: LIKEDKFHICIQAPI*GFEPFQARIQIWIH Trigger: ATGAATCCAAATTTGGATCCTGGCCTGGAAAGGCTCAAAGCCCAATATGGGAGCCTGGATACAAATGTGAAACTTATCTTCTTTTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561634.6 ENST00000562002.6 ENST00000565215.2 |
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| CDS CCA 72 bp | TCAGATCACATCACTTTGGCAAAGAAAACCTTCCAATaGCTTCCATCATCCTTAGAACAAAATTCCAACTGT | + |
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Preference number: 6 (lower is better) Translates to: SDHITLAKKTFQ*LPSSLEQNSNC Trigger: ACAGTTGGAATTTTGTTCTAAGGATGATGGAAGCCATTGGAAGGTTTTCTTTGCCAAAGTGATGTGATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561719.5 |
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