Pregenerated sensors for LINC01224 (Homo sapiens)
Ensembl gene IDs: ENSG00000269416Ensembl transcript IDs: ENST00000593573.5, ENST00000594576.5, ENST00000596283.5, ENST00000596763.1, ENST00000598922.1, ENST00000600643.5, ENST00000601293.5, ENST00000601338.5, ENST00000602077.5, ENST00000654756.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCTGTGGGCAGGGTCCAGGCTGGAGACACATATCACCTTGGCGTTaGGCCCATGAATATGTGACAGTGCCTTCTGAGGGCAGGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: PCGQGPGWRHISPWR*AHEYVTVPSEGRPK Trigger: CTTGGGCCTGCCCTCAGAAGGCACTGTCACATATTCATGGGCCCAACGCCAAGGTGATATGTGTCTCCAGCCTGGACCCTGCCCACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS CCA 90 bp | AATGCCCCCTGTGGGCAGGGTCCAGGCTGGAGACACATATCACCTTaGCGTTGGGCCCATGAATATGTGACAGTGCCTTCTGAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NAPCGQGPGWRHISP*RWAHEYVTVPSEGR Trigger: CCTGCCCTCAGAAGGCACTGTCACATATTCATGGGCCCAACGCCAAGGTGATATGTGTCTCCAGCCTGGACCCTGCCCACAGGGGGCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS CCA 90 bp | GGCCAAGAGATATGTCACAATGCCCCCTGTGGGCAGGGTCCAGGCTaGAGACACATATCACCTTGGCGTTGGGCCCATGAATATGTGACA | + |
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Preference number: 5 (lower is better) Translates to: GQEICHNAPCGQGPG*RHISPWRWAHEYVT Trigger: TGTCACATATTCATGGGCCCAACGCCAAGGTGATATGTGTCTCCAGCCTGGACCCTGCCCACAGGGGGCATTGTGACATATCTCTTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 90 bp | CCCGGAGTAGCTGAAATTACAGGCGCCTTTGATCATCCACGGGAGTaGCGATCCCTGGTGTCTGCTTCCAGGGAGAAGTCGCAATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PGVAEITGAFDHPRE*RSLVSASREKSQSF Trigger: GAAAGATTGCGACTTCTCCCTGGAAGCAGACACCAGGGATCGTCACTCCCGTGGATGATCAAAGGCGCCTGTAATTTCAGCTACTCCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593573.5 |
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| CDS TCA 90 bp | TTCTCCTGCCTCAGCCCCCGGAGTAGCTTTGATCATCCACGGGAGTaGCGATCCCTAAATGCTGGGTCCAGCAATGAAGCACAATCCCAT | + |
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Preference number: 5 (lower is better) Translates to: FSCLSPRSSFDHPRE*RSLNAGSSNEAQSH Trigger: ATGGGATTGTGCTTCATTGCTGGACCCAGCATTTAGGGATCGTCACTCCCGTGGATGATCAAAGCTACTCCGGGGGCTGAGGCAGGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000600643.5 ENST00000601338.5 |
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| CDS CCA 90 bp | AATCAAACATCTGATGGGCCAAGAGATATGTCACAATGCCCCCTGTaGGCAGGGTCCAGGCTGGAGACACATATCACCTTGGCGTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: NQTSDGPRDMSQCPL*AGSRLETHITLALG Trigger: GCCCAACGCCAAGGTGATATGTGTCTCCAGCCTGGACCCTGCCCACAGGGGGCATTGTGACATATCTCTTGGCCCATCAGATGTTTGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 90 bp | CCACCTGGGTGCTCAATTAGGGATACGTTACAGTCTCCTCCTGTGTaGTGGGTGCAGGGTTATATCACAATGTCCGCTGTAGGCAGGACC | + |
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Preference number: 5 (lower is better) Translates to: PPGCSIRDTLQSPPV*WVQGYITMSAVGRT Trigger: GGTCCTGCCTACAGCGGACATTGTGATATAACCCTGCACCCATCACACAGGAGGAGACTGTAACGTATCCCTAATTGAGCACCCAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596283.5 |
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| CDS TCA 90 bp | CCAGGCAGGAGAGTCAAATTACTCAGGTGCTGCATTTTGGGGCAGTaGTATGTCAGAATCTCCTCTGAGGGCAGGGACAGGGCAGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: PGRRVKLLRCCILGQ*YVRISSEGRDRAEV Trigger: CACTTCTGCCCTGTCCCTGCCCTCAGAGGAGATTCTGACATATCACTGCCCCAAAATGCAGCACCTGAGTAATTTGACTCTCCTGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596283.5 |
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| CDS TCA 90 bp | CAGGCTGGAGACACATATCACCTTGGCGTTGGGCCCATGAATATGTaGCAGTGCCTTCTGAGGGCAGGCCCAAGGCAAAAGAGTAACATC | + |
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Preference number: 5 (lower is better) Translates to: QAGDTYHLGVGPMNM*QCLLRAGPRQKSNI Trigger: GATGTTACTCTTTTGCCTTGGGCCTGCCCTCAGAAGGCACTGTCACATATTCATGGGCCCAACGCCAAGGTGATATGTGTCTCCAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS CCA 90 bp | CATCACTTAGGCACTGGGTCCAGCAGTGTGGCACAATCCTATTTGTaGGCCGGGCCAATTCTGAAGAATCACATTACTCAGGTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: HHLGTGSSSVAQSYL*AGPILKNHITQVLG Trigger: GCCCAGCACCTGAGTAATGTGATTCTTCAGAATTGGCCCGGCCCACAAATAGGATTGTGCCACACTGCTGGACCCAGTGCCTAAGTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS TCA 90 bp | CATCACCTAAGTGCAAGGCCCAGCGATATGTCACAATGCCCCCTGTaGGCAGCACCAATGCAGAAAAAGAGAGTCAGTTCTGGGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: HHLSARPSDMSQCPL*AAPMQKKRVSSGFS Trigger: GCTGAACCCAGAACTGACTCTCTTTTTCTGCATTGGTGCTGCTCACAGGGGGCATTGTGACATATCGCTGGGCCTTGCACTTAGGTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS GCA 90 bp | CGATCCCTGGTGTCTGCTTCCAGGGAGAAGTCGCAATCTTTCCTGTaGAGGGCAGGTTGCAGGCAAGAAGTGTCACATCTTTTAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: RSLVSASREKSQSFL*RAGCRQEVSHLLGH Trigger: ATGACCTAAAAGATGTGACACTTCTTGCCTGCAACCTGCCCTGCACAGGAAAGATTGCGACTTCTCCCTGGAAGCAGACACCAGGGATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000593573.5 ENST00000596283.5 |
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| CDS GCA 90 bp | GGGGATAACAATCAAACATCTGATGGGCCAAGAGATATGTCACAATaGCCCCTGTGGGCAGGGTCCAGGCTGGAGACACATATCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: GDNNQTSDGPRDMSQ*PLWAGSRLETHITL Trigger: CAAGGTGATATGTGTCTCCAGCCTGGACCCTGCCCACAGGGGGCATTGTGACATATCTCTTGGCCCATCAGATGTTTGATTGTTATCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS CCA 90 bp | CGAGTAGCACCAAGGCAGAAGAATAGAGTTACATCACTTAGGCACTaGGTCCAGCAGTGTGGCACAATCCTATTTGTGGGCCGGGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: RVAPRQKNRVTSLRH*VQQCGTILFVGRAN Trigger: ATTGGCCCGGCCCACAAATAGGATTGTGCCACACTGCTGGACCCAGTGCCTAAGTGATGTAACTCTATTCTTCTGCCTTGGTGCTACTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS GCA 90 bp | CAAGGCCCAGCGATATGTCACAATGCCCCCTGTGAGCAGCACCAATaGAGAAAAAGAGAGTCAGTTCTGGGTTCAGCTATATGTCACTAT | + |
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Preference number: 5 (lower is better) Translates to: QGPAICHNAPCEQHQ*RKRESVLGSAICHY Trigger: ATAGTGACATATAGCTGAACCCAGAACTGACTCTCTTTTTCTGCATTGGTGCTGCTCACAGGGGGCATTGTGACATATCGCTGGGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS CCA 90 bp | CAATCTTCCCTGAGGGAAAGAACCAAGCAGGAATATCACATCACCTaGGTGCTCATCCAGGGATATGTTACAGTTCTCTCCTGGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: QSSLRERTKQEYHIT*VLIQGYVTVLSWCL Trigger: CAGACACCAGGAGAGAACTGTAACATATCCCTGGATGAGCACCCAGGTGATGTGATATTCCTGCTTGGTTCTTTCCCTCAGGGAAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596763.1 |
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| CDS CCA 90 bp | ACAATCCCCATGTGGACACATTCCAGTAAGACAACACCTAGGTGCTaGGCCCAGGAACATATGACTGTGTCTTTTATAGGCAAACACAGG | + |
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Preference number: 5 (lower is better) Translates to: TIPMWTHSSKTTPRC*AQEHMTVSFIGKHR Trigger: CCTGTGTTTGCCTATAAAAGACACAGTCATATGTTCCTGGGCCCAGCACCTAGGTGTTGTCTTACTGGAATGTGTCCACATGGGGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 90 bp | CAGCAAGGCAGAAGAGGAGACTCACATTACCTGGGTGTAAGGCTCTaGGATATGTTACAATGTCTTTTTCGAGTAGCACCAAGGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: QQGRRGDSHYLGVRL*DMLQCLFRVAPRQK Trigger: CTTCTGCCTTGGTGCTACTCGAAAAAGACATTGTAACATATCTCAGAGCCTTACACCCAGGTAATGTGAGTCTCCTCTTCTGCCTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS TCA 90 bp | CTAGGCATGAGAGGAGAGTCACATCAAGTTAAGTACTGGGCCACGTaGCATATCACAATCCCCATGTGGACACATTCCAGTAAGACAACA | + |
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Preference number: 5 (lower is better) Translates to: LGMRGESHQVKYWAT*HITIPMWTHSSKTT Trigger: TGTTGTCTTACTGGAATGTGTCCACATGGGGATTGTGATATGTCACGTGGCCCAGTACTTAACTTGATGTGACTCTCCTCTCATGCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 90 bp | CAGGGACCAGGCAGGAGAAGAAAGTCACATCATGTGGGTGAGGTGTaGAAATATATGTCACAATGCTCCTTGTGGGTAGTAGAGTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: QGPGRRRKSHHVGEV*KYMSQCSLWVVELH Trigger: ATGCAACTCTACTACCCACAAGGAGCATTGTGACATATATTTTCACACCTCACCCACATGATGTGACTTTCTTCTCCTGCCTGGTCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS GCA 90 bp | ATCACAATCCCCATGTGGACACATTCCAGTAAGACAACACCTAGGTaGTGGGCCCAGGAACATATGACTGTGTCTTTTATAGGCAAACAC | + |
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Preference number: 5 (lower is better) Translates to: ITIPMWTHSSKTTPR*WAQEHMTVSFIGKH Trigger: GTGTTTGCCTATAAAAGACACAGTCATATGTTCCTGGGCCCAGCACCTAGGTGTTGTCTTACTGGAATGTGTCCACATGGGGATTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS GCA 90 bp | TATGTCACTATTCCATCTGTAGGCAAGACAGTCAGATCACTCAGGTaGTGGGCAGAGAAATATGTTCCAAGTAAACCTGTGAGAAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: YVTIPSVGKTVRSLR*WAEKYVPSKPVRRC Trigger: GCACCTTCTCACAGGTTTACTTGGAACATATTTCTCTGCCCAGCACCTGAGTGATCTGACTGTCTTGCCTACAGATGGAATAGTGACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS TCA 90 bp | GCAGAAGTGTGCGTCAAAATCACACCTGTGGACTGGATCCAAATATaGGAGTCAAGTTTTCCACCTTTGACTTCCTCTATGTGTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: AEVCVKITPVDWIQI*ESSFPPLTSSMCEI Trigger: AATCTCACACATAGAGGAAGTCAAAGGTGGAAAACTTGACTCTCATATTTGGATCCAGTCCACAGGTGTGATTTTGACGCACACTTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000600643.5 ENST00000601293.5 |
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| CDS GCA 90 bp | GGAGAGTCACATCAAATAGTTGATGCTCTTAAAGATATGTCACAATaGTCTGTTGTCAGGGTCCATACGGAAGACTCATGCCACCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: GESHQIVDALKDMSQ*SVVRVHTEDSCHLV Trigger: AACAAGGTGGCATGAGTCTTCCGTATGGACCCTGACAACAGAGCATTGTGACATATCTTTAAGAGCATCAACTATTTGATGTGACTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000654756.1 |
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| CDS CCA 90 bp | ATAAAAACACAGAGGCAAGAAAATAGAGTCACATCACCTAGTTTCTaGTACAGTGATATGTCACGATTCCATCTATGGGTTAAATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: IKTQRQENRVTSPSF*YSDMSRFHLWVKSR Trigger: CCTGGATTTAACCCATAGATGGAATCGTGACATATCACTGTACCAGAAACTAGGTGATGTGACTCTATTTTCTTGCCTCTGTGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS TCA 72 bp | CTCAGCCCCCGGAGTAGCTTTGATCATCCACGGGAGTaGCGATCCCCTTTCCCACCTTCTGGAATGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSPRSSFDHPRE*RSPFPPSGMSW Trigger: CCAGGACATTCCAGAAGGTGGGAAAGGGGATCGTCACTCCCGTGGATGATCAAAGCTACTCCGGGGGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601293.5 |
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| CDS GCA 72 bp | CACAAGGTCACTGTGGGCACAGCCCAGGCAGGAGCATaGAATCTCATAGGTAGTGGGCCTAAATGCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: HKVTVGTAQAGA*NLIGSGPKCWV Trigger: GACCCAGCATTTAGGCCCACTACCTATGAGATTGCATGCTCCTGCCTGGGCTGTGCCCACAGTGACCTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000596763.1 |
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| CDS TCA 72 bp | ACGGGAGTGACGATCCCTAAATGCTGGGTCCAGCAATaGAGCACAATCCCATCTGTACGCTGGGTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TGVTIPKCWVQQ*STIPSVRWVQA Trigger: TGCCTGGACCCAGCGTACAGATGGGATTGTGCTTCATTGCTGGACCCAGCATTTAGGGATCGTCACTCCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000600643.5 ENST00000601338.5 |
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| CDS CCA 72 bp | TGTGGGCAGGGTCCAGGCTGGAGACACATATCACCTTaGCGTTGGGCCCATGAATATGTGACAGTGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CGQGPGWRHISP*RWAHEYVTVPS Trigger: AGAAGGCACTGTCACATATTCATGGGCCCAACGCCAAGGTGATATGTGTCTCCAGCCTGGACCCTGCCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 72 bp | CTCATAGGTAGTGGGCCTAAATGCTGGGTCCAGCAATaGAGCACAATCCCATCTGTACGCTGGGTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LIGSGPKCWVQQ*STIPSVRWVQA Trigger: TGCCTGGACCCAGCGTACAGATGGGATTGTGCTTCATTGCTGGACCCAGCATTTAGGCCCACTACCTATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000596763.1 |
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| CDS TCA 72 bp | CTGAAATTACAGGCGCCTAAATGCTGGGTCCAGCAATaGAGCACAATCCCATCTGTACGCTGGGTCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LKLQAPKCWVQQ*STIPSVRWVQA Trigger: TGCCTGGACCCAGCGTACAGATGGGATTGTGCTTCATTGCTGGACCCAGCATTTAGGCGCCTGTAATTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594576.5 |
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| CDS GCA 72 bp | GTGTCTGCTTCCAGGGAGAAGTCGCAATCTTTCCTGTaGAGGGCAGGTTGCAGGCAAGAAGTGTCACATCTT | + |
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Preference number: 6 (lower is better) Translates to: VSASREKSQSFL*RAGCRQEVSHL Trigger: AAGATGTGACACTTCTTGCCTGCAACCTGCCCTGCACAGGAAAGATTGCGACTTCTCCCTGGAAGCAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000596763.1 |
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| CDS CCA 72 bp | CAGGACCGAGGCAGTAGAGTTACATCACCTGGGTGTTaGACCCAGCAATATGTCACAATGGCCTACATGGGT | + |
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Preference number: 6 (lower is better) Translates to: QDRGSRVTSPGC*TQQYVTMAYMG Trigger: ACCCATGTAGGCCATTGTGACATATTGCTGGGTCCAACACCCAGGTGATGTAACTCTACTGCCTCGGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596283.5 |
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| CDS CCA 72 bp | GGCACTGGGTCCAGCAGTGTGGCACAATCCTATTTGTaGGCCGGGCCAATTCTGAAGAATCACATTACTCAG | + |
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Preference number: 6 (lower is better) Translates to: GTGSSSVAQSYL*AGPILKNHITQ Trigger: CTGAGTAATGTGATTCTTCAGAATTGGCCCGGCCCACAAATAGGATTGTGCCACACTGCTGGACCCAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS TCA 72 bp | GTGTGGCACAATCCTATTTGTGGGCCGGGCCAATTCTaGAGAATCACATTACTCAGGTGCTGGGCAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: VWHNPICGPGQF*RITLLRCWAEV Trigger: CACTTCTGCCCAGCACCTGAGTAATGTGATTCTTCAGAATTGGCCCGGCCCACAAATAGGATTGTGCCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS TCA 72 bp | AGTGCAAGGCCCAGCGATATGTCACAATGCCCCCTGTaGGCAGCACCAATGCAGAAAAAGAGAGTCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SARPSDMSQCPL*AAPMQKKRVSS Trigger: AGAACTGACTCTCTTTTTCTGCATTGGTGCTGCTCACAGGGGGCATTGTGACATATCGCTGGGCCTTGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS CCA 72 bp | GGTGTTGGACCCAGCAATATGTCACAATGGCCTACATaGGTAGGGCACAGGCAGGAGACTCACATAACCTAT | + |
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Preference number: 6 (lower is better) Translates to: GVGPSNMSQWPT*VGHRQETHITY Trigger: ATAGGTTATGTGAGTCTCCTGCCTGTGCCCTACCCATGTAGGCCATTGTGACATATTGCTGGGTCCAACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596283.5 |
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| CDS CAA 72 bp | CAGGGAGAAGTCGCAATCTTTCCTGTGCAGGGCAGGTaGCAGGCAAGAAGTGTCACATCTTTTAGGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: QGEVAIFPVQGR*QARSVTSFRSW Trigger: CCATGACCTAAAAGATGTGACACTTCTTGCCTGCAACCTGCCCTGCACAGGAAAGATTGCGACTTCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000596763.1 |
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| CDS CAA 90 bp | TTACATCACTTAGGCACTGGGTCCAGCAGTGTGGCACAATCCTATTaGTGGGCCGGGCCAATTCTGAAGAATCACATTACTCAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LHHLGTGSSSVAQSY*WAGPILKNHITQVL Trigger: CAGCACCTGAGTAATGTGATTCTTCAGAATTGGCCCGGCCCACAAATAGGATTGTGCCACACTGCTGGACCCAGTGCCTAAGTGATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS TCA 72 bp | AGAGTCAAATTACTCAGGTGCTGCATTTTGGGGCAGTaGTATGTCAGAATCTCCTCTGAGGGCAGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: RVKLLRCCILGQ*YVRISSEGRDR Trigger: CCTGTCCCTGCCCTCAGAGGAGATTCTGACATATCACTGCCCCAAAATGCAGCACCTGAGTAATTTGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000596283.5 |
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| CDS GCA 72 bp | TCATCCAGGGATATGTTACAGTTCTCTCCTGGTGTCTaGTTCCAGGGAGAAGTCGCAATCTTTCCTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SSRDMLQFSPGV*FQGEVAIFPVQ Trigger: CTGCACAGGAAAGATTGCGACTTCTCCCTGGAAGCAGACACCAGGAGAGAACTGTAACATATCCCTGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596763.1 |
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| CDS CCA 72 bp | CAGGCCCAAGGCAAAAGAGTAACATCATTATGCGGCTaGGCCCAGTGGTTTGTTACAATCTCTGCTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: QAQGKRVTSLCG*AQWFVTISAAV Trigger: AACTGCAGCAGAGATTGTAACAAACCACTGGGCCCAGCCGCATAATGATGTTACTCTTTTGCCTTGGGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 72 bp | CTGGGCCCAGTGGTTTGTTACAATCTCTGCTGCAGTTaGAACCTAGAAAGAAGAGAAGAATCAGGCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LGPVVCYNLCCS*NLERREESGQV Trigger: CACCTGGCCTGATTCTTCTCTTCTTTCTAGGTTTCAACTGCAGCAGAGATTGTAACAAACCACTGGGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS GCA 72 bp | GGGAAAGAACCAAGCAGGAATATCACATCACCTGGGTaGTCATCCAGGGATATGTTACAGTTCTCTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GKEPSRNITSPG*SSRDMLQFSPG Trigger: ACCAGGAGAGAACTGTAACATATCCCTGGATGAGCACCCAGGTGATGTGATATTCCTGCTTGGTTCTTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596763.1 |
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| CDS GCA 72 bp | TTAGTGAAGTCACAGCCTCATAGGCGTGCTGATTCTTaGTCTGAATGTCACCAACTCACCTGTGGACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LVKSQPHRRADS*SECHQLTCGLD Trigger: ATCCAGTCCACAGGTGAGTTGGTGACATTCAGAGCAAGAATCAGCACGCCTATGAGGCTGTGACTTCACTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS CCA 72 bp | CTGAGGGAAAGAACCAAGCAGGAATATCACATCACCTaGGTGCTCATCCAGGGATATGTTACAGTTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRERTKQEYHIT*VLIQGYVTVLS Trigger: GGAGAGAACTGTAACATATCCCTGGATGAGCACCCAGGTGATGTGATATTCCTGCTTGGTTCTTTCCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596763.1 |
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| CDS CAA 72 bp | GCTGGGCCCAGTGGTTTGTTACAATCTCTGCTGCAGTaGAAACCTAGAAAGAAGAGAAGAATCAGGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AGPSGLLQSLLQ*KPRKKRRIRPG Trigger: ACCTGGCCTGATTCTTCTCTTCTTTCTAGGTTTCAACTGCAGCAGAGATTGTAACAAACCACTGGGCCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 72 bp | TGCTCAATTAGGGATACGTTACAGTCTCCTCCTGTGTaGTGGGTGCAGGGTTATATCACAATGTCCGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: CSIRDTLQSPPV*WVQGYITMSAV Trigger: TACAGCGGACATTGTGATATAACCCTGCACCCATCACACAGGAGGAGACTGTAACGTATCCCTAATTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596283.5 |
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| CDS TCA 72 bp | GGGACCAGGCAGGAGAAGAAAGTCACATCATGTGGGTaGGGTGTGAAAATATATGTCACAATGCTCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GTRQEKKVTSCG*GVKIYVTMLLV Trigger: CACAAGGAGCATTGTGACATATATTTTCACACCTCACCCACATGATGTGACTTTCTTCTCCTGCCTGGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS GCA 72 bp | TGCAGGCAAGAAGTGTCACATCTTTTAGGTCATGGATaGAGATATATGTCACAAGGTCACTGTGGGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: CRQEVSHLLGHG*RYMSQGHCGHS Trigger: GCTGTGCCCACAGTGACCTTGTGACATATATCTGCATCCATGACCTAAAAGATGTGACACTTCTTGCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000596763.1 |
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| CDS GCA 72 bp | CCCATGTGGACACATTCCAGTAAGACAACACCTAGGTaGTGGGCCCAGGAACATATGACTGTGTCTTTTATA | + |
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Preference number: 6 (lower is better) Translates to: PMWTHSSKTTPR*WAQEHMTVSFI Trigger: TATAAAAGACACAGTCATATGTTCCTGGGCCCAGCACCTAGGTGTTGTCTTACTGGAATGTGTCCACATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS CCA 72 bp | ATGTGGACACATTCCAGTAAGACAACACCTAGGTGCTaGGCCCAGGAACATATGACTGTGTCTTTTATAGGC | + |
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Preference number: 6 (lower is better) Translates to: MWTHSSKTTPRC*AQEHMTVSFIG Trigger: GCCTATAAAAGACACAGTCATATGTTCCTGGGCCCAGCACCTAGGTGTTGTCTTACTGGAATGTGTCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS CCA 72 bp | CCATCTGTAGGCAAGACAGTCAGATCACTCAGGTGCTaGGCAGAGAAATATGTTCCAAGTAAACCTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PSVGKTVRSLRC*AEKYVPSKPVR Trigger: TCTCACAGGTTTACTTGGAACATATTTCTCTGCCCAGCACCTGAGTGATCTGACTGTCTTGCCTACAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS GCA 72 bp | ATTCCATCTGTAGGCAAGACAGTCAGATCACTCAGGTaGTGGGCAGAGAAATATGTTCCAAGTAAACCTGTG | + |
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Preference number: 6 (lower is better) Translates to: IPSVGKTVRSLR*WAEKYVPSKPV Trigger: CACAGGTTTACTTGGAACATATTTCTCTGCCCAGCACCTGAGTGATCTGACTGTCTTGCCTACAGATGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS CCA 72 bp | AGGTTGCAGGCAAGAAGTGTCACATCTTTTAGGTCATaGATGCAGATATATGTCACAAGGTCACTGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RLQARSVTSFRS*MQIYVTRSLWA Trigger: TGCCCACAGTGACCTTGTGACATATATCTGCATCCATGACCTAAAAGATGTGACACTTCTTGCCTGCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000596763.1 |
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| CDS CCA 72 bp | GTGAGCAGCACCAATGCAGAAAAAGAGAGTCAGTTCTaGGTTCAGCTATATGTCACTATTCCATCTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: VSSTNAEKESQF*VQLYVTIPSVG Trigger: GCCTACAGATGGAATAGTGACATATAGCTGAACCCAGAACTGACTCTCTTTTTCTGCATTGGTGCTGCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS CAA 72 bp | ATTGGCGTAGAGCCCCACAATATGTCTCAGTCTTCCTaGCTAGCAGAACCTATGATGGAAGAAGAATCACAC | + |
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Preference number: 6 (lower is better) Translates to: IGVEPHNMSQSS*LAEPMMEEESH Trigger: GTGTGATTCTTCTTCCATCATAGGTTCTGCTAGCAAGGAAGACTGAGACATATTGTGGGGCTCTACGCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS TCA 72 bp | GGCAGGAGAAGAAAGTCACATCATGTGGGTGAGGTGTaGAAATATATGTCACAATGCTCCTTGTGGGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: GRRRKSHHVGEV*KYMSQCSLWVV Trigger: TACTACCCACAAGGAGCATTGTGACATATATTTTCACACCTCACCCACATGATGTGACTTTCTTCTCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS CAA 72 bp | TCTATGAGCAAAGCTCAGGCAGGAGAAACACATCACTaGATTTCTGTGCCAGAAGATGTGTCACAATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SMSKAQAGETHH*ISVPEDVSQSL Trigger: GAGAGATTGTGACACATCTTCTGGCACAGAAATCAAGTGATGTGTTTCTCCTGCCTGAGCTTTGCTCATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000654756.1 |
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| CDS TCA 72 bp | TGCGTCAAAATCACACCTGTGGACTGGATCCAAATATaGGAGTCAAGTTTTCCACCTTTGACTTCCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: CVKITPVDWIQI*ESSFPPLTSSM Trigger: CATAGAGGAAGTCAAAGGTGGAAAACTTGACTCTCATATTTGGATCCAGTCCACAGGTGTGATTTTGACGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000593573.5 ENST00000600643.5 ENST00000601293.5 |
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| CDS TCA 72 bp | AGAAGAGGAGACTCACATTACCTGGGTGTAAGGCTCTaGGATATGTTACAATGTCTTTTTCGAGTAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RRGDSHYLGVRL*DMLQCLFRVAP Trigger: TGGTGCTACTCGAAAAAGACATTGTAACATATCTCAGAGCCTTACACCCAGGTAATGTGAGTCTCCTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS TCA 72 bp | AATGTCACCAACTCACCTGTGGACTGGATCCAAATATaGGAGTCAAGTTTTCCACCTTTGACTTCCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: NVTNSPVDWIQI*ESSFPPLTSSM Trigger: CATAGAGGAAGTCAAAGGTGGAAAACTTGACTCTCATATTTGGATCCAGTCCACAGGTGAGTTGGTGACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654756.1 |
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| CDS CAA 90 bp | CCTCTATGTGTGAGATTCAGAACTCACAATGATGATGTGTACTGTTaGATGGGTGTTCATACAATGGTAAAAGTCTCCTCTGTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PLCVRFRTHNDDVYC*MGVHTMVKVSSVCW Trigger: CCAGCACACAGAGGAGACTTTTACCATTGTATGAACACCCATCAAACAGTACACATCATCATTGTGAGTTCTGAATCTCACACATAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000598922.1 ENST00000600643.5 ENST00000601293.5 ENST00000601338.5 ENST00000602077.5 ENST00000654756.1 |
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| CDS CCA 72 bp | CAGAGGCAAGAAAATAGAGTCACATCACCTAGTTTCTaGTACAGTGATATGTCACGATTCCATCTATGGGTT | + |
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Preference number: 6 (lower is better) Translates to: QRQENRVTSPSF*YSDMSRFHLWV Trigger: AACCCATAGATGGAATCGTGACATATCACTGTACCAGAAACTAGGTGATGTGACTCTATTTTCTTGCCTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS CAA 72 bp | CAGCTAGGTGTATTGGGCCTAGCAATATGTCACAAGTaGTTTTGTGAGAAGGAACTAAGCAGTAAAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: QLGVLGLAICHK*FCEKELSSKRE Trigger: TTCCCTTTTACTGCTTAGTTCCTTCTCACAAAACAACTTGTGACATATTGCTAGGCCCAATACACCTAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000596283.5 ENST00000600643.5 ENST00000654756.1 |
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| CDS CAA 90 bp | GAGTTACACCAGCTAGGTGTATTGGGCCTAGCAATATGTCACAAGTaGTTTTGTGAGAAGGAACTAAGCAGTAAAAGGGAATCATATTAC | + |
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Preference number: 6 (lower is better) Translates to: ELHQLGVLGLAICHK*FCEKELSSKRESYY Trigger: GTAATATGATTCCCTTTTACTGCTTAGTTCCTTCTCACAAAACAACTTGTGACATATTGCTAGGCCCAATACACCTAGCTGGTGTAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000596283.5 ENST00000600643.5 |
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| CDS TCA 72 bp | AGAGTCAAGTTTTCCACCTTTGACTTCCTCTATGTGTaGGATTCAGAACTCACAATGATGATGTGTACTGTT | + |
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Preference number: 6 (lower is better) Translates to: RVKFSTFDFLYV*DSELTMMMCTV Trigger: AACAGTACACATCATCATTGTGAGTTCTGAATCTCACACATAGAGGAAGTCAAAGGTGGAAAACTTGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000598922.1 ENST00000600643.5 ENST00000601293.5 ENST00000601338.5 ENST00000602077.5 ENST00000654756.1 |
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| CDS CAA 72 bp | GTGAGATTCAGAACTCACAATGATGATGTGTACTGTTaGATGGGTGTTCATACAATGGTAAAAGTCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: VRFRTHNDDVYC*MGVHTMVKVSS Trigger: AGAGGAGACTTTTACCATTGTATGAACACCCATCAAACAGTACACATCATCATTGTGAGTTCTGAATCTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000593573.5 ENST00000596283.5 ENST00000598922.1 ENST00000600643.5 ENST00000601293.5 ENST00000601338.5 ENST00000602077.5 ENST00000654756.1 |
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| CDS TCA 72 bp | AATTTAAATATTTTGTGGTTGACAAGTGGTGGAATCTaGAGACCTGGGATCAATGAAAGGGAAGGTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: NLNILWLTSGGI*RPGINEREGLG Trigger: ACCTAAACCTTCCCTTTCATTGATCCCAGGTCTTCAGATTCCACCACTTGTCAACCACAAAATATTTAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600643.5 |
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