Pregenerated sensors for LINC01222 (Homo sapiens)

Ensembl gene IDs: ENSG00000233410

Ensembl transcript IDs: ENST00000427439.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CACGTGTTATGTAAAACCTTCCATGAACATCTCTGTGCTTGGAATTaGAACTTTAAGGAGCTTGCCACCAGAATTTTATTCAGAACTTAC	+
Preference number: 5 (lower is better) Translates to: HVLCKTFHEHLCAWN*NFKELATRILFRTY Trigger: GTAAGTTCTGAATAAAATTCTGGTGGCAAGCTCCTTAAAGTTCCAATTCCAAGCACAGAGATGTTCATGGAAGGTTTTACATAACACGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427439.1
CDS CCA 90 bp	GTTCTACACGTGTTATGTAAAACCTTCCATGAACATCTCTGTGCTTaGAATTGGAACTTTAAGGAGCTTGCCACCAGAATTTTATTCAGA	+
Preference number: 5 (lower is better) Translates to: VLHVLCKTFHEHLCA*NWNFKELATRILFR Trigger: TCTGAATAAAATTCTGGTGGCAAGCTCCTTAAAGTTCCAATTCCAAGCACAGAGATGTTCATGGAAGGTTTTACATAACACGTGTAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427439.1
CDS TCA 72 bp	TCAATAGCCTTGGGGTTTCTAGACTTGAAGAATGGCTaGTGTCTTAGGATTTCCCTTCAACATTATTCCAGG	+
Preference number: 6 (lower is better) Translates to: SIALGFLDLKNG*CLRISLQHYSR Trigger: CCTGGAATAATGTTGAAGGGAAATCCTAAGACATCAGCCATTCTTCAAGTCTAGAAACCCCAAGGCTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427439.1
CDS CCA 72 bp	TGTAAAACCTTCCATGAACATCTCTGTGCTTGGAATTaGAACTTTAAGGAGCTTGCCACCAGAATTTTATTC	+
Preference number: 6 (lower is better) Translates to: CKTFHEHLCAWN*NFKELATRILF Trigger: GAATAAAATTCTGGTGGCAAGCTCCTTAAAGTTCCAATTCCAAGCACAGAGATGTTCATGGAAGGTTTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427439.1
CDS CAA 90 bp	CCTTCCATGAACATCTCTGTGCTTGGAATTGGAACTTTAAGGAGCTaGCCACCAGAATTTTATTCAGAACTTACCAATAAGGATCTATAT	+
Preference number: 6 (lower is better) Translates to: PSMNISVLGIGTLRS*PPEFYSELTNKDLY Trigger: ATATAGATCCTTATTGGTAAGTTCTGAATAAAATTCTGGTGGCAAGCTCCTTAAAGTTCCAATTCCAAGCACAGAGATGTTCATGGAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427439.1
CDS CAA 72 bp	AACATCTCTGTGCTTGGAATTGGAACTTTAAGGAGCTaGCCACCAGAATTTTATTCAGAACTTACCAATAAG	+
Preference number: 6 (lower is better) Translates to: NISVLGIGTLRS*PPEFYSELTNK Trigger: CTTATTGGTAAGTTCTGAATAAAATTCTGGTGGCAAGCTCCTTAAAGTTCCAATTCCAAGCACAGAGATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427439.1

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