Pregenerated sensors for LINC01217 (Homo sapiens)
Ensembl gene IDs: ENSG00000251219Ensembl transcript IDs: ENST00000514427.1, ENST00000657311.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCATGGATGCTGGCTGGCTGTGCATTGCAGGCACCATGGTGCCAGTaGCCCAAGGGCAGTCCTTCAAAGAGACTTAGAGATGCCAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: PWMLAGCALQAPWCQ*PKGSPSKRLRDASL Trigger: GAGACTGGCATCTCTAAGTCTCTTTGAAGGACTGCCCTTGGGCCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 90 bp | TGTCTGTCCTTGGTGAGGGCTATCCTTGAGGGCATGTTACCACCATaGATGCTGGCTGGCTGTGCATTGCAGGCACCATGGTGCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: CLSLVRAILEGMLPP*MLAGCALQAPWCQW Trigger: CCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGGTGGTAACATGCCCTCAAGGATAGCCCTCACCAAGGACAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 90 bp | TTACCACCATGGATGCTGGCTGGCTGTGCATTGCAGGCACCATGGTaGCAGTGGCCCAAGGGCAGTCCTTCAAAGAGACTTAGAGATGCC | + |
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Preference number: 5 (lower is better) Translates to: LPPWMLAGCALQAPW*QWPKGSPSKRLRDA Trigger: GGCATCTCTAAGTCTCTTTGAAGGACTGCCCTTGGGCCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGGTGGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 90 bp | ATGTTACCACCATGGATGCTGGCTGGCTGTGCATTGCAGGCACCATaGTGCCAGTGGCCCAAGGGCAGTCCTTCAAAGAGACTTAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: MLPPWMLAGCALQAP*CQWPKGSPSKRLRD Trigger: ATCTCTAAGTCTCTTTGAAGGACTGCCCTTGGGCCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGGTGGTAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 90 bp | AGATTTTATAATCTGTGCCTGTCTGTCCTTGGTGAGGGCTATCCTTaGGGGCATGTTACCACCATGGATGCTGGCTGGCTGTGCATTGCA | + |
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Preference number: 5 (lower is better) Translates to: RFYNLCLSVLGEGYP*GHVTTMDAGWLCIA Trigger: TGCAATGCACAGCCAGCCAGCATCCATGGTGGTAACATGCCCTCAAGGATAGCCCTCACCAAGGACAGACAGGCACAGATTATAAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 90 bp | CTTCAAAGAGACTTAGAGATGCCAGTCTCTAGGAGCCAAGCATGTTaGAGCCAGAGGATGGGCACACAGAAAGAGTCAGAAGAATCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LQRDLEMPVSRSQAC*SQRMGTQKESEESE Trigger: CTCAGATTCTTCTGACTCTTTCTGTGTGCCCATCCTCTGGCTTCAACATGCTTGGCTCCTAGAGACTGGCATCTCTAAGTCTCTTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 90 bp | TCGTATATAGGACTTTGCTCAGTTTTATCAGCTGGACACCATCACTaGTGCTTTTCTCCCATGTTCTCCTCCCTGGGATTTGGGACATCC | + |
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Preference number: 5 (lower is better) Translates to: SYIGLCSVLSAGHHH*CFSPMFSSLGFGTS Trigger: GGATGTCCCAAATCCCAGGGAGGAGAACATGGGAGAAAAGCACCAGTGATGGTGTCCAGCTGATAAAACTGAGCAAAGTCCTATATACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514427.1 |
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| CDS CCA 90 bp | ACACCATCACTGGTGCTTTTCTCCCATGTTCTCCTCCCTGGGATTTaGGACATCCTTCATGATTCTGGTGGATTCCTGTTTTTCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: TPSLVLFSHVLLPGI*DILHDSGGFLFFFL Trigger: CAAGAAGAAAAACAGGAATCCACCAGAATCATGAAGGATGTCCCAAATCCCAGGGAGGAGAACATGGGAGAAAAGCACCAGTGATGGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514427.1 |
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| CDS GCA 90 bp | GGCTTTTCTTCCTTTCTGGAGCTGATGCAGGGACAAGGTGACATTTaGTCTGTTTTAGTCCTCACGTTACTGACAATGACTCCTGTATCT | + |
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Preference number: 5 (lower is better) Translates to: GFSSFLELMQGQGDI*SVLVLTLLTMTPVS Trigger: AGATACAGGAGTCATTGTCAGTAACGTGAGGACTAAAACAGAGCAAATGTCACCTTGTCCCTGCATCAGCTCCAGAAAGGAAGAAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 90 bp | TGCTCTGTTTTAGTCCTCACGTTACTGACAATGACTCCTGTATCTTaGGTGGGCTTGAATAAAGCCACTGCATGTGAAACGTTGATGCTA | + |
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Preference number: 5 (lower is better) Translates to: CSVLVLTLLTMTPVS*VGLNKATACETLML Trigger: TAGCATCAACGTTTCACATGCAGTGGCTTTATTCAAGCCCACGCAAGATACAGGAGTCATTGTCAGTAACGTGAGGACTAAAACAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 90 bp | TCCGGTCAGTTGCTTTCAGGAATAAATCAAGTCTCAAACTTGCCATaGATCTGCCAGCTCTCTTGCTTTCTTCTCACAGGAAACATAAGG | + |
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Preference number: 5 (lower is better) Translates to: SGQLLSGINQVSNLP*ICQLSCFLLTGNIR Trigger: CCTTATGTTTCCTGTGAGAAGAAAGCAAGAGAGCTGGCAGATGCATGGCAAGTTTGAGACTTGATTTATTCCTGAAAGCAACTGACCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 90 bp | CAGTTGCTTTCAGGAATAAATCAAGTCTCAAACTTGCCATGCATCTaGCAGCTCTCTTGCTTTCTTCTCACAGGAAACATAAGGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: QLLSGINQVSNLPCI*QLSCFLLTGNIRSM Trigger: CATGGACCTTATGTTTCCTGTGAGAAGAAAGCAAGAGAGCTGGCAGATGCATGGCAAGTTTGAGACTTGATTTATTCCTGAAAGCAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 90 bp | ATGCTCTCAGACACAGAAAAGTATAACTCACGAGTAACTGATATGTaGTTAAACTTTCCAGCTTCTGAAGCTTCACGTATGGCTTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: MLSDTEKYNSRVTDM*LNFPASEASRMAFL Trigger: CAGAAAAGCCATACGTGAAGCTTCAGAAGCTGGAAAGTTTAAGCACATATCAGTTACTCGTGAGTTATACTTTTCTGTGTCTGAGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 90 bp | TTGCTTTCTTCTCACAGGAAACATAAGGTCCATGGCTATTTCTTTTaGTCTCCTATGCCTAGAATTACCTCAATTCATAATTCTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LLSSHRKHKVHGYFF*SPMPRITSIHNSGH Trigger: ATGACCAGAATTATGAATTGAGGTAATTCTAGGCATAGGAGATCAAAAGAAATAGCCATGGACCTTATGTTTCCTGTGAGAAGAAAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | CCATGGATGCTGGCTGGCTGTGCATTGCAGGCACCATaGTGCCAGTGGCCCAAGGGCAGTCCTTCAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PWMLAGCALQAP*CQWPKGSPSKR Trigger: TCTCTTTGAAGGACTGCCCTTGGGCCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 90 bp | ATCCTTGAGGGCATGTTACCACCATGGATGCTGGCTGGCTGTGCATaGCAGGCACCATGGTGCCAGTGGCCCAAGGGCAGTCCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ILEGMLPPWMLAGCA*QAPWCQWPKGSPSK Trigger: CTTTGAAGGACTGCCCTTGGGCCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGGTGGTAACATGCCCTCAAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 72 bp | TGGATGCTGGCTGGCTGTGCATTGCAGGCACCATGGTaGCAGTGGCCCAAGGGCAGTCCTTCAAAGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: WMLAGCALQAPW*QWPKGSPSKRL Trigger: AAGTCTCTTTGAAGGACTGCCCTTGGGCCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | GGGCTATCCTTGAGGGCATGTTACCACCATGGATGCTaGCTGGCTGTGCATTGCAGGCACCATGGTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GLSLRACYHHGC*LAVHCRHHGAS Trigger: ACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGGTGGTAACATGCCCTCAAGGATAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | CTGGCTGGCTGTGCATTGCAGGCACCATGGTGCCAGTaGCCCAAGGGCAGTCCTTCAAAGAGACTTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: LAGCALQAPWCQ*PKGSPSKRLRD Trigger: ATCTCTAAGTCTCTTTGAAGGACTGCCCTTGGGCCACTGGCACCATGGTGCCTGCAATGCACAGCCAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | TTGGTGAGGGCTATCCTTGAGGGCATGTTACCACCATaGATGCTGGCTGGCTGTGCATTGCAGGCACCATGG | + |
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Preference number: 6 (lower is better) Translates to: LVRAILEGMLPP*MLAGCALQAPW Trigger: CCATGGTGCCTGCAATGCACAGCCAGCCAGCATCCATGGTGGTAACATGCCCTCAAGGATAGCCCTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 72 bp | AATCTGTGCCTGTCTGTCCTTGGTGAGGGCTATCCTTaGGGGCATGTTACCACCATGGATGCTGGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NLCLSVLGEGYP*GHVTTMDAGWL Trigger: CAGCCAGCCAGCATCCATGGTGGTAACATGCCCTCAAGGATAGCCCTCACCAAGGACAGACAGGCACAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 72 bp | GACTTAGAGATGCCAGTCTCTAGGAGCCAAGCATGTTaGAGCCAGAGGATGGGCACACAGAAAGAGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: DLEMPVSRSQAC*SQRMGTQKESE Trigger: TTCTGACTCTTTCTGTGTGCCCATCCTCTGGCTTCAACATGCTTGGCTCCTAGAGACTGGCATCTCTAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 72 bp | CTTTGCTCAGTTTTATCAGCTGGACACCATCACTGGTaGTTTTCTCCCATGTTCTCCTCCCTGGGATTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LCSVLSAGHHHW*FSPMFSSLGFG Trigger: CCCAAATCCCAGGGAGGAGAACATGGGAGAAAAGCACCAGTGATGGTGTCCAGCTGATAAAACTGAGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514427.1 |
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| CDS CCA 72 bp | CAGTCTCTAGGAGCCAAGCATGTTGAAGCCAGAGGATaGGCACACAGAAAGAGTCAGAAGAATCTGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: QSLGAKHVEARG*AHRKSQKNLRR Trigger: TCTCCTCAGATTCTTCTGACTCTTTCTGTGTGCCCATCCTCTGGCTTCAACATGCTTGGCTCCTAGAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | CTGGTGCTTTTCTCCCATGTTCTCCTCCCTGGGATTTaGGACATCCTTCATGATTCTGGTGGATTCCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LVLFSHVLLPGI*DILHDSGGFLF Trigger: AAACAGGAATCCACCAGAATCATGAAGGATGTCCCAAATCCCAGGGAGGAGAACATGGGAGAAAAGCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514427.1 |
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| CDS CCA 72 bp | GGACTTTGCTCAGTTTTATCAGCTGGACACCATCACTaGTGCTTTTCTCCCATGTTCTCCTCCCTGGGATTT | + |
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Preference number: 6 (lower is better) Translates to: GLCSVLSAGHHH*CFSPMFSSLGF Trigger: AAATCCCAGGGAGGAGAACATGGGAGAAAAGCACCAGTGATGGTGTCCAGCTGATAAAACTGAGCAAAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514427.1 |
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| CDS CAA 90 bp | GTTACCTCCGGTCAGTTGCTTTCAGGAATAAATCAAGTCTCAAACTaGCCATGCATCTGCCAGCTCTCTTGCTTTCTTCTCACAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: VTSGQLLSGINQVSN*PCICQLSCFLLTGN Trigger: GTTTCCTGTGAGAAGAAAGCAAGAGAGCTGGCAGATGCATGGCAAGTTTGAGACTTGATTTATTCCTGAAAGCAACTGACCGGAGGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 72 bp | AAACCTCAGATTTGTTCCTCCTTGGGGCAAGGTTGCTaGGATTTTATAATCTGTGCCTGTCTGTCCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KPQICSSLGQGC*DFIICACLSLV Trigger: CACCAAGGACAGACAGGCACAGATTATAAAATCTCAGCAACCTTGCCCCAAGGAGGAACAAATCTGAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 72 bp | TCCTTTCTGGAGCTGATGCAGGGACAAGGTGACATTTaGTCTGTTTTAGTCCTCACGTTACTGACAATGACT | + |
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Preference number: 6 (lower is better) Translates to: SFLELMQGQGDI*SVLVLTLLTMT Trigger: AGTCATTGTCAGTAACGTGAGGACTAAAACAGAGCAAATGTCACCTTGTCCCTGCATCAGCTCCAGAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 72 bp | AGGTGCGTTCTTAAGAGCTGCAATGGGGCAGGCACATaGCTCTCACAAACTAAAGATGAGGAAACAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: RCVLKSCNGAGT*LSQTKDEETEN Trigger: ATTTTCTGTTTCCTCATCTTTAGTTTGTGAGAGGCATGTGCCTGCCCCATTGCAGCTCTTAAGAACGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 72 bp | TGCGTGGGCTTGAATAAAGCCACTGCATGTGAAACGTaGATGCTAATGATGACTGTGGAGACTCCTGTCATT | + |
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Preference number: 6 (lower is better) Translates to: CVGLNKATACET*MLMMTVETPVI Trigger: AATGACAGGAGTCTCCACAGTCATCATTAGCATCAACGTTTCACATGCAGTGGCTTTATTCAAGCCCACGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 90 bp | CCTGTATCTTGCGTGGGCTTGAATAAAGCCACTGCATGTGAAACGTaGATGCTAATGATGACTGTGGAGACTCCTGTCATTTACTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: PVSCVGLNKATACET*MLMMTVETPVIYSL Trigger: TAGAGAGTAAATGACAGGAGTCTCCACAGTCATCATTAGCATCAACGTTTCACATGCAGTGGCTTTATTCAAGCCCACGCAAGATACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 72 bp | GGCACACAGAAAGAGTCAGAAGAATCTGAGGAGAATTaGTGGAGTACTGATAGCTTCTGCTTCAAATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GTQKESEESEEN*WSTDSFCFKCC Trigger: GCAACATTTGAAGCAGAAGCTATCAGTACTCCAGCAATTCTCCTCAGATTCTTCTGACTCTTTCTGTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | CCTATCGTATATAGGACTTTGCTCAGTTTTATCAGCTaGACACCATCACTGGTGCTTTTCTCCCATGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PIVYRTLLSFIS*TPSLVLFSHVL Trigger: GAGAACATGGGAGAAAAGCACCAGTGATGGTGTCCAGCTGATAAAACTGAGCAAAGTCCTATATACGATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514427.1 |
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| CDS CAA 72 bp | ACGTTACTGACAATGACTCCTGTATCTTGCGTGGGCTaGAATAAAGCCACTGCATGTGAAACGTTGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: TLLTMTPVSCVG*NKATACETLML Trigger: TAGCATCAACGTTTCACATGCAGTGGCTTTATTCAAGCCCACGCAAGATACAGGAGTCATTGTCAGTAACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 72 bp | GGTCAGTTGCTTTCAGGAATAAATCAAGTCTCAAACTaGCCATGCATCTGCCAGCTCTCTTGCTTTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GQLLSGINQVSN*PCICQLSCFLL Trigger: GAGAAGAAAGCAAGAGAGCTGGCAGATGCATGGCAAGTTTGAGACTTGATTTATTCCTGAAAGCAACTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 90 bp | TTAGTCCTCACGTTACTGACAATGACTCCTGTATCTTGCGTGGGCTaGAATAAAGCCACTGCATGTGAAACGTTGATGCTAATGATGACT | + |
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Preference number: 6 (lower is better) Translates to: LVLTLLTMTPVSCVG*NKATACETLMLMMT Trigger: AGTCATCATTAGCATCAACGTTTCACATGCAGTGGCTTTATTCAAGCCCACGCAAGATACAGGAGTCATTGTCAGTAACGTGAGGACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 90 bp | CCAAAAGCCATAAGAATGCGGTCAAAGGGCAGGGATAAGGGTGTTTaGAGTAATTGTTTTACAAGGCCTTTGCTGAACACTTGTAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: PKAIRMRSKGRDKGV*SNCFTRPLLNTCSD Trigger: GTCACTACAAGTGTTCAGCAAAGGCCTTGTAAAACAATTACTCAAAACACCCTTATCCCTGCCCTTTGACCGCATTCTTATGGCTTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 72 bp | CATTTCCAAGCATCTTCCCAATTTAGCTCTAGGTCTTaGGAGAAACAAAGTATTCCCCCTTGGCCTATGTTG | + |
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Preference number: 6 (lower is better) Translates to: HFQASSQFSSRS*EKQSIPPWPML Trigger: CAACATAGGCCAAGGGGGAATACTTTGTTTCTCTCAAGACCTAGAGCTAAATTGGGAAGATGCTTGGAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514427.1 |
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| CDS CAA 72 bp | ATAAGAATGCGGTCAAAGGGCAGGGATAAGGGTGTTTaGAGTAATTGTTTTACAAGGCCTTTGCTGAACACT | + |
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Preference number: 6 (lower is better) Translates to: IRMRSKGRDKGV*SNCFTRPLLNT Trigger: AGTGTTCAGCAAAGGCCTTGTAAAACAATTACTCAAAACACCCTTATCCCTGCCCTTTGACCGCATTCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 90 bp | AGGAATAAATCAAGTCTCAAACTTGCCATGCATCTGCCAGCTCTCTaGCTTTCTTCTCACAGGAAACATAAGGTCCATGGCTATTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RNKSSLKLAMHLPAL*LSSHRKHKVHGYFF Trigger: AAAGAAATAGCCATGGACCTTATGTTTCCTGTGAGAAGAAAGCAAGAGAGCTGGCAGATGCATGGCAAGTTTGAGACTTGATTTATTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | ACACAGAAAGAGTCAGAAGAATCTGAGGAGAATTGCTaGAGTACTGATAGCTTCTGCTTCAAATGTTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: TQKESEESEENC*STDSFCFKCCY Trigger: ATAGCAACATTTGAAGCAGAAGCTATCAGTACTCCAGCAATTCTCCTCAGATTCTTCTGACTCTTTCTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 72 bp | GACACAGAAAAGTATAACTCACGAGTAACTGATATGTaGTTAAACTTTCCAGCTTCTGAAGCTTCACGTATG | + |
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Preference number: 6 (lower is better) Translates to: DTEKYNSRVTDM*LNFPASEASRM Trigger: CATACGTGAAGCTTCAGAAGCTGGAAAGTTTAAGCACATATCAGTTACTCGTGAGTTATACTTTTCTGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CCA 72 bp | TTCCAGCTTCTGAAGCTTCACGTATGGCTTTTCTGTTaGCTGTTTTATGATTGTGCAAACAGAATCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: FQLLKLHVWLFC*LFYDCANRITK Trigger: TTTTGTGATTCTGTTTGCACAATCATAAAACAGCCAACAGAAAAGCCATACGTGAAGCTTCAGAAGCTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 72 bp | ACTGTCATTGGCACTTCAAAGATATATTCAACATTTTaGTGGGTCCAGCCCAATCATATAATGCATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TVIGTSKIYSTF*WVQPNHIMHFR Trigger: CCTGAAATGCATTATATGATTGGGCTGGACCCATCAAAATGTTGAATATATCTTTGAAGTGCCAATGACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS TCA 72 bp | TCTCACAGGAAACATAAGGTCCATGGCTATTTCTTTTaGTCTCCTATGCCTAGAATTACCTCAATTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: SHRKHKVHGYFF*SPMPRITSIHN Trigger: ATTATGAATTGAGGTAATTCTAGGCATAGGAGATCAAAAGAAATAGCCATGGACCTTATGTTTCCTGTGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS CAA 72 bp | AAAATATCTCCGAAAGAAACTAATAAACTGATAACATaGGTTATCTCCACAGAGGAATACTGGGTGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: KISPKETNKLIT*VISTEEYWVNR Trigger: CCTGTTCACCCAGTATTCCTCTGTGGAGATAACCAATGTTATCAGTTTATTAGTTTCTTTCGGAGATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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| CDS GCA 72 bp | AACATAAGGTCCATGGCTATTTCTTTTGATCTCCTATaGCTAGAATTACCTCAATTCATAATTCTGGTCATT | + |
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Preference number: 6 (lower is better) Translates to: NIRSMAISFDLL*LELPQFIILVI Trigger: AATGACCAGAATTATGAATTGAGGTAATTCTAGGCATAGGAGATCAAAAGAAATAGCCATGGACCTTATGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657311.1 |
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