Pregenerated sensors for LINC01215 (Homo sapiens)
Ensembl gene IDs: ENSG00000271856Ensembl transcript IDs: ENST00000607746.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGAACGAAAGACCCAGCAGGACCCACCTGTAACGAGCTGACTACATaGGGACAAAGACAGGCATGTACAGCTCCTAGGAGCACTTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTKDPAGPTCNELTT*GQRQACTAPRSTCE Trigger: CTCACAAGTGCTCCTAGGAGCTGTACATGCCTGTCTTTGTCCCCATGTAGTCAGCTCGTTACAGGTGGGTCCTGCTGGGTCTTTCGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS GCA 90 bp | ACTGCAGGAAATGCAACTGGACCCACTTCCCTTCTGCTCTATGTCTaGACTGGGGACTCACTGGACCAGGACTTATTAGCCATCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAGNATGPTSLLLYV*TGDSLDQDLLAILK Trigger: CTTCAAGATGGCTAATAAGTCCTGGTCCAGTGAGTCCCCAGTGCAGACATAGAGCAGAAGGGAAGTGGGTCCAGTTGCATTTCCTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 90 bp | AGGAAATGCAACTGGACCCACTTCCCTTCTGCTCTATGTCTGCACTaGGGACTCACTGGACCAGGACTTATTAGCCATCTTGAAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RKCNWTHFPSALCLH*GLTGPGLISHLEAE Trigger: CTCTGCTTCAAGATGGCTAATAAGTCCTGGTCCAGTGAGTCCCCAGTGCAGACATAGAGCAGAAGGGAAGTGGGTCCAGTTGCATTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS TCA 90 bp | CCAGCCCTCACCTTCCAGTTCCACGCAGTTAAGAACTTGGCAAAATaGGCAAGCAGAGGATCAAAGCGTGGTATCAGCTTTAGCAGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PALTFQFHAVKNLAK*ASRGSKRGISFSSG Trigger: ACCACTGCTAAAGCTGATACCACGCTTTGATCCTCTGCTTGCTCATTTTGCCAAGTTCTTAACTGCGTGGAACTGGAAGGTGAGGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS TCA 90 bp | TCTTCAAGAACCCTTGGTTTCGGTTGTTGGAGTTTGGGGGCAGGGTaGAAAATCAATCATCCAGCCCTCACCTTCCAGTTCCACGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRTLGFGCWSLGAG*KINHPALTFQFHAV Trigger: AACTGCGTGGAACTGGAAGGTGAGGGCTGGATGATTGATTTTTCACCCTGCCCCCAAACTCCAACAACCGAAACCAAGGGTTCTTGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS GCA 90 bp | CCCCTCTCACAACCAATCAGGTTGGTTGTGGGCCAAGTCTTCATTTaGGTGGGAGTATTACTTTGTAACTTCACTTCAGCCTCTAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSQPIRLVVGQVFI*VGVLLCNFTSASNW Trigger: CCAATTAGAGGCTGAAGTGAAGTTACAAAGTAATACTCCCACGCAAATGAAGACTTGGCCCACAACCAACCTGATTGGTTGTGAGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 90 bp | TCAATCATCCAGCCCTCACCTTCCAGTTCCACGCAGTTAAGAACTTaGCAAAATGAGCAAGCAGAGGATCAAAGCGTGGTATCAGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SIIQPSPSSSTQLRT*QNEQAEDQSVVSAL Trigger: TAAAGCTGATACCACGCTTTGATCCTCTGCTTGCTCATTTTGCCAAGTTCTTAACTGCGTGGAACTGGAAGGTGAGGGCTGGATGATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 90 bp | TCTCACAACCAATCAGGTTGGTTGTGGGCCAAGTCTTCATTTGCGTaGGAGTATTACTTTGTAACTTCACTTCAGCCTCTAATTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SHNQSGWLWAKSSFA*EYYFVTSLQPLIGH Trigger: GTGACCAATTAGAGGCTGAAGTGAAGTTACAAAGTAATACTCCCACGCAAATGAAGACTTGGCCCACAACCAACCTGATTGGTTGTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 90 bp | AAAATGAAGCGCAATGAAACAAGTGTGTATGGTGTGTGTGTGGGGTaGTGTGTGTTCAGAAAGATAGGAGTGTGCAATGGCAAGGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KMKRNETSVYGVCVG*CVFRKIGVCNGKET Trigger: AGTTTCCTTGCCATTGCACACTCCTATCTTTCTGAACACACACCACCCCACACACACACCATACACACTTGTTTCATTGCGCTTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 90 bp | GAGGATCAAAGCGTGGTATCAGCTTTAGCAGTGGTAAAGCTGGATTaGATAACACTACACGTTCCAAGCACAATATCAGCTTTAGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: EDQSVVSALAVVKLD*ITLHVPSTISALGN Trigger: ATTACCTAAAGCTGATATTGTGCTTGGAACGTGTAGTGTTATCCAATCCAGCTTTACCACTGCTAAAGCTGATACCACGCTTTGATCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | GACCCAGCAGGACCCACCTGTAACGAGCTGACTACATaGGGACAAAGACAGGCATGTACAGCTCCTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DPAGPTCNELTT*GQRQACTAPRS Trigger: GCTCCTAGGAGCTGTACATGCCTGTCTTTGTCCCCATGTAGTCAGCTCGTTACAGGTGGGTCCTGCTGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CAA 72 bp | ACCCCAGAAAGTTCTGTAACTGGGCCCTTGAGCTGCTaGCTCGGCCTGCTCCCACCCTGTGGAGTGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TPESSVTGPLSC*LGLLPPCGVCF Trigger: AAAACACACTCCACAGGGTGGGAGCAGGCCGAGCAAGCAGCTCAAGGGCCCAGTTACAGAACTTTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CAA 72 bp | CCTGTTGCTGCCCTGCCCCTCTCTCTTCAAGAACCCTaGGTTTCGGTTGTTGGAGTTTGGGGGCAGGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PVAALPLSLQEP*VSVVGVWGQGE Trigger: TTCACCCTGCCCCCAAACTCCAACAACCGAAACCAAGGGTTCTTGAAGAGAGAGGGGCAGGGCAGCAACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | CTGTTGCTGCCCTGCCCCTCTCTCTTCAAGAACCCTTaGTTTCGGTTGTTGGAGTTTGGGGGCAGGGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLPCPSLFKNP*FRLLEFGGRVK Trigger: TTTCACCCTGCCCCCAAACTCCAACAACCGAAACCAAGGGTTCTTGAAGAGAGAGGGGCAGGGCAGCAACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS GCA 72 bp | AAACTGCAGGAAATGCAACTGGACCCACTTCCCTTCTaGTCTATGTCTGCACTGGGGACTCACTGGACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KLQEMQLDPLPF*SMSALGTHWTR Trigger: CCTGGTCCAGTGAGTCCCCAGTGCAGACATAGAGCAGAAGGGAAGTGGGTCCAGTTGCATTTCCTGCAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | TCTAAAGGGTATTTAAACCCCAGAAAGTTCTGTAACTaGGCCCTTGAGCTGCTTGCTCGGCCTGCTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SKGYLNPRKFCN*ALELLARPAPT Trigger: GGTGGGAGCAGGCCGAGCAAGCAGCTCAAGGGCCCAGTTACAGAACTTTCTGGGGTTTAAATACCCTTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CAA 90 bp | TATGTCTGCACTGGGGACTCACTGGACCAGGACTTATTAGCCATCTaGAAGCAGAGAAGCAAGAACGAAAGACCCAGCAGGACCCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: YVCTGDSLDQDLLAI*KQRSKNERPSRTHL Trigger: CAGGTGGGTCCTGCTGGGTCTTTCGTTCTTGCTTCTCTGCTTCAAGATGGCTAATAAGTCCTGGTCCAGTGAGTCCCCAGTGCAGACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | AACTGGACCCACTTCCCTTCTGCTCTATGTCTGCACTaGGGACTCACTGGACCAGGACTTATTAGCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: NWTHFPSALCLH*GLTGPGLISHL Trigger: AAGATGGCTAATAAGTCCTGGTCCAGTGAGTCCCCAGTGCAGACATAGAGCAGAAGGGAAGTGGGTCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | CAGCCCTCACCTTCCAGTTCCACGCAGTTAAGAACTTaGCAAAATGAGCAAGCAGAGGATCAAAGCGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QPSPSSSTQLRT*QNEQAEDQSVV Trigger: TACCACGCTTTGATCCTCTGCTTGCTCATTTTGCCAAGTTCTTAACTGCGTGGAACTGGAAGGTGAGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | TCTCTTCAAGAACCCTTGGTTTCGGTTGTTGGAGTTTaGGGGCAGGGTGAAAAATCAATCATCCAGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLQEPLVSVVGV*GQGEKSIIQPS Trigger: TGAGGGCTGGATGATTGATTTTTCACCCTGCCCCCAAACTCCAACAACCGAAACCAAGGGTTCTTGAAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | CGCAATGAAACAAGTGTGTATGGTGTGTGTGTGGGGTaGTGTGTGTTCAGAAAGATAGGAGTGTGCAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RNETSVYGVCVG*CVFRKIGVCNG Trigger: GCCATTGCACACTCCTATCTTTCTGAACACACACCACCCCACACACACACCATACACACTTGTTTCATTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS TCA 72 bp | ACCTTCCAGTTCCACGCAGTTAAGAACTTGGCAAAATaGGCAAGCAGAGGATCAAAGCGTGGTATCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TFQFHAVKNLAK*ASRGSKRGISF Trigger: AAAGCTGATACCACGCTTTGATCCTCTGCTTGCTCATTTTGCCAAGTTCTTAACTGCGTGGAACTGGAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS GCA 72 bp | CAACCAATCAGGTTGGTTGTGGGCCAAGTCTTCATTTaGGTGGGAGTATTACTTTGTAACTTCACTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QPIRLVVGQVFI*VGVLLCNFTSA Trigger: GGCTGAAGTGAAGTTACAAAGTAATACTCCCACGCAAATGAAGACTTGGCCCACAACCAACCTGATTGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | CAATCAGGTTGGTTGTGGGCCAAGTCTTCATTTGCGTaGGAGTATTACTTTGTAACTTCACTTCAGCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: QSGWLWAKSSFA*EYYFVTSLQPL Trigger: TAGAGGCTGAAGTGAAGTTACAAAGTAATACTCCCACGCAAATGAAGACTTGGCCCACAACCAACCTGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CAA 72 bp | CCTCTAATTGGTCACTTTCCACAACTAATCAGACGTTaGCATTCTGATTGGTCCCTTCCAACCAATCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PLIGHFPQLIRR*HSDWSLPTNQT Trigger: AGTCTGATTGGTTGGAAGGGACCAATCAGAATGCAAACGTCTGATTAGTTGTGGAAAGTGACCAATTAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | GAAACCATGAAGCTGCTGGGTTTTAAAACTTATGCATaGATAGCTTCCAAGCTCTCAGTTGTATCATGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ETMKLLGFKTYA*IASKLSVVSCS Trigger: ACTACATGATACAACTGAGAGCTTGGAAGCTATCCATGCATAAGTTTTAAAACCCAGCAGCTTCATGGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||
| CDS CCA 72 bp | GGAGTATTACTTTGTAACTTCACTTCAGCCTCTAATTaGTCACTTTCCACAACTAATCAGACGTTTGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: GVLLCNFTSASN*SLSTTNQTFAF Trigger: GAATGCAAACGTCTGATTAGTTGTGGAAAGTGACCAATTAGAGGCTGAAGTGAAGTTACAAAGTAATACTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000607746.1 |
||