Pregenerated sensors for LINC01214 (Homo sapiens)

Ensembl gene IDs: ENSG00000243550

Ensembl transcript IDs: ENST00000471222.3, ENST00000665600.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCAAAGCAGCAACACTCTTCACCGGAAATCAGGCTCCCAAGAGCCTaGAGTTTCAGAAGGTGGGTCTCAAACTCGATTTTAAGTCTTCCA	+
Preference number: 5 (lower is better) Translates to: AKQQHSSPEIRLPRA*SFRRWVSNSILSLP Trigger: TGGAAGACTTAAAATCGAGTTTGAGACCCACCTTCTGAAACTGCAGGCTCTTGGGAGCCTGATTTCCGGTGAAGAGTGTTGCTGCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471222.3 ENST00000665600.1
CDS TCA 90 bp	ACTATAATCCTAATTAATGTTCATCTTCTTCACTGTGTTCAAGTGTaGAAAATGCAAAGCAGCAACACTCTTCACCGGAAATCAGGCTCC	+
Preference number: 5 (lower is better) Translates to: TIILINVHLLHCVQV*KMQSSNTLHRKSGS Trigger: GGAGCCTGATTTCCGGTGAAGAGTGTTGCTGCTTTGCATTTTTCACACTTGAACACAGTGAAGAAGATGAACATTAATTAGGATTATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471222.3 ENST00000665600.1
CDS GCA 90 bp	TTGTTCAAAATCACTTTCCATAGTCTTGTGCTTCCTGCCTTTCATTaGTATTCAATCCTAACGGTTTCCAGATGTTTAACTTCCATTCAA	+
Preference number: 5 (lower is better) Translates to: LFKITFHSLVLPAFH*YSILTVSRCLTSIQ Trigger: TTGAATGGAAGTTAAACATCTGGAAACCGTTAGGATTGAATAGCAATGAAAGGCAGGAAGCACAAGACTATGGAAAGTGATTTTGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471222.3
CDS GCA 72 bp	CAACACTCTTCACCGGAAATCAGGCTCCCAAGAGCCTaGAGTTTCAGAAGGTGGGTCTCAAACTCGATTTTA	+
Preference number: 6 (lower is better) Translates to: QHSSPEIRLPRA*SFRRWVSNSIL Trigger: TAAAATCGAGTTTGAGACCCACCTTCTGAAACTGCAGGCTCTTGGGAGCCTGATTTCCGGTGAAGAGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471222.3 ENST00000665600.1
CDS TCA 72 bp	CCAGAACAAACTTTCTGGAAGGGGTTTGTCCTGAGCTaGGTCTTGATGAAGGTGAAGGAGCTGCTTAGGAAA	+
Preference number: 6 (lower is better) Translates to: PEQTFWKGFVLS*VLMKVKELLRK Trigger: TTTCCTAAGCAGCTCCTTCACCTTCATCAAGACTCAGCTCAGGACAAACCCCTTCCAGAAAGTTTGTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665600.1
CDS TCA 72 bp	AGAGTGATAGGCTCTTTGATAAAGGCAGTCACAAGGTaGGGCCCCAAACTCACAGAGCAAGAAACCAGAACA	+
Preference number: 6 (lower is better) Translates to: RVIGSLIKAVTR*GPKLTEQETRT Trigger: TGTTCTGGTTTCTTGCTCTGTGAGTTTGGGGCCTCACCTTGTGACTGCCTTTATCAAAGAGCCTATCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665600.1
CDS CAA 72 bp	ATGTGGGTTCTTCCCTTTCCTCTAGGCTCTAAACAATaGGTTATCTTTGGGACCACCTGGTTGTTCAAAATC	+
Preference number: 6 (lower is better) Translates to: MWVLPFPLGSKQ*VIFGTTWLFKI Trigger: GATTTTGAACAACCAGGTGGTCCCAAAGATAACCAATTGTTTAGAGCCTAGAGGAAAGGGAAGAACCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471222.3
CDS GCA 72 bp	ATCACTTTCCATAGTCTTGTGCTTCCTGCCTTTCATTaGTATTCAATCCTAACGGTTTCCAGATGTTTAACT	+
Preference number: 6 (lower is better) Translates to: ITFHSLVLPAFH*YSILTVSRCLT Trigger: AGTTAAACATCTGGAAACCGTTAGGATTGAATAGCAATGAAAGGCAGGAAGCACAAGACTATGGAAAGTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471222.3

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