Pregenerated sensors for LINC01210 (Homo sapiens)
Ensembl gene IDs: ENSG00000239513Ensembl transcript IDs: ENST00000465283.6, ENST00000469216.2, ENST00000471091.6, ENST00000478772.6, ENST00000652948.1, ENST00000654450.1, ENST00000654543.1, ENST00000654610.1, ENST00000655048.1, ENST00000660613.1, ENST00000660863.1, ENST00000661982.1, ENST00000662157.1, ENST00000662180.1, ENST00000664320.1, ENST00000666528.1, ENST00000667229.1, ENST00000667692.1, ENST00000671510.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCGCAGGAAAACAGAGCAAGGGAGCTGCCTTAGTTCTCAAACACTaGATATGGATGGGTGTTCCGCGGAAGATTATTCTAGACCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GAGKQSKGAALVLKH*IWMGVPRKIILDPV Trigger: CACAGGGTCTAGAATAATCTTCCGCGGAACACCCATCCATATGCAGTGTTTGAGAACTAAGGCAGCTCCCTTGCTCTGTTTTCCTGCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654543.1 ENST00000654610.1 |
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| CDS CCA 90 bp | GGAAAACAGAGCAAGGGAGCTGCCTTAGTTCTCAAACACTGCATATaGATGGGTGTTCCGCGGAAGATTATTCTAGACCCTGTGAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: GKQSKGAALVLKHCI*MGVPRKIILDPVKE Trigger: TTCTTTCACAGGGTCTAGAATAATCTTCCGCGGAACACCCATCCATATGCAGTGTTTGAGAACTAAGGCAGCTCCCTTGCTCTGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654543.1 ENST00000654610.1 |
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| CDS TCA 90 bp | TCCTTTCTACCAAATAGGTTGGCCATGAATGCTGTTGTAGTTGTGTaGCACACTTTGAATTTCACCAAGCATGTGGTAACAAGACTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SFLPNRLAMNAVVVV*HTLNFTKHVVTRLV Trigger: GACCAGTCTTGTTACCACATGCTTGGTGAAATTCAAAGTGTGTCACACAACTACAACAGCATTCATGGCCAACCTATTTGGTAGAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666528.1 |
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| CDS GCA 90 bp | TTTCTGTCAGCGTTTGTGAGAAACCTGCCCAACAAACCCATCCAATaGTCTGCAGTCCTTTGGTATAAAATTATAATTGGCACAAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: FLSAFVRNLPNKPIQ*SAVLWYKIIIGTSD Trigger: ATCACTTGTGCCAATTATAATTTTATACCAAAGGACTGCAGAGCATTGGATGGGTTTGTTGGGCAGGTTTCTCACAAACGCTGACAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000652948.1 ENST00000654450.1 ENST00000654543.1 ENST00000654610.1 ENST00000660863.1 ENST00000666528.1 |
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| CDS GCA 90 bp | TGCTCAATTAATAACCATCTAATAAACCATGTGGCTCCCTCTTATTaGAAACAGAGTACATCTTTCCAGAGAATATGGAGACAAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: CSINNHLINHVAPSY*KQSTSFQRIWRQIF Trigger: GAAGATTTGTCTCCATATTCTCTGGAAAGATGTACTCTGTTTGCAATAAGAGGGAGCCACATGGTTTATTAGATGGTTATTAATTGAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000465283.6 ENST00000469216.2 ENST00000471091.6 ENST00000478772.6 ENST00000652948.1 ENST00000654450.1 ENST00000654543.1 ENST00000654610.1 ENST00000655048.1 ENST00000660613.1 ENST00000660863.1 ENST00000661982.1 ENST00000662157.1 ENST00000662180.1 ENST00000664320.1 ENST00000666528.1 ENST00000667229.1 ENST00000667692.1 ENST00000671510.1 |
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| CDS CAA 90 bp | AGGCTGCCGTGGGCAGGTGTGAACACCTCAGCCCTCGCGGCGGGTTaGGAGCCGCCCAGCGTAGGAAGAGGGCAGAAGTGGGCTCGCGTC | + |
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Preference number: 6 (lower is better) Translates to: RLPWAGVNTSALAAG*EPPSVGRGQKWARV Trigger: GACGCGAGCCCACTTCTGCCCTCTTCCTACGCTGGGCGGCTCCAAACCCGCCGCGAGGGCTGAGGTGTTCACACCTGCCCACGGCAGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654543.1 ENST00000654610.1 ENST00000661982.1 |
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| CDS CAA 72 bp | TGGGCAGGTGTGAACACCTCAGCCCTCGCGGCGGGTTaGGAGCCGCCCAGCGTAGGAAGAGGGCAGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: WAGVNTSALAAG*EPPSVGRGQKW Trigger: CCACTTCTGCCCTCTTCCTACGCTGGGCGGCTCCAAACCCGCCGCGAGGGCTGAGGTGTTCACACCTGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652948.1 ENST00000654543.1 ENST00000654610.1 ENST00000661982.1 |
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| CDS CAA 72 bp | AGCGGGGAGGCGGTTGCCTTCCGTGCAGGATTTCCGTaGAGGGCTCACAATAAGCGGTCTCAAGCGGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SGEAVAFRAGFP*RAHNKRSQAGA Trigger: TGCCCCCGCTTGAGACCGCTTATTGTGAGCCCTCAACGGAAATCCTGCACGGAAGGCAACCGCCTCCCCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000469216.2 ENST00000471091.6 ENST00000478772.6 ENST00000652948.1 ENST00000654543.1 ENST00000654610.1 ENST00000655048.1 ENST00000661982.1 ENST00000664320.1 ENST00000667229.1 ENST00000671510.1 |
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| CDS CCA 72 bp | GAAGATTATTCTAGACCCTGTGAAAGAAGTCTCCACTaGGCGCCGGCCACGGCATTGGGGTGCGCGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: EDYSRPCERSLH*APATALGCAPA Trigger: AGCAGGCGCGCACCCCAATGCCGTGGCCGGCGCCCAGTGGAGACTTCTTTCACAGGGTCTAGAATAATCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654610.1 |
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| CDS TCA 72 bp | GGAGTCGGGCTCCCAGAGCGGGCAACTAACAGAGGCTaGGAATTTCCAAGAGGTCCTGGCTCTGGGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: GVGLPERATNRG*EFPRGPGSGKE Trigger: TTCTTTCCCAGAGCCAGGACCTCTTGGAAATTCTCAGCCTCTGTTAGTTGCCCGCTCTGGGAGCCCGACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000478772.6 ENST00000655048.1 ENST00000660613.1 ENST00000661982.1 ENST00000662157.1 ENST00000662180.1 ENST00000664320.1 ENST00000667692.1 ENST00000671510.1 |
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| CDS GCA 72 bp | ATGATTTCAGATGTCCATCGCGAGCGGGGAGGCGGTTaGCTTCCGTGCAGGATTTCCGTTGAGGGCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: MISDVHRERGGG*LPCRISVEGSQ Trigger: TTGTGAGCCCTCAACGGAAATCCTGCACGGAAGGCAACCGCCTCCCCGCTCGCGATGGACATCTGAAATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667229.1 |
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| CDS GCA 72 bp | CCGGGGGCTAGGCGCAGGAAAACAGAGCAAGGGAGCTaGCTTAGTTCTCAAACACTGCATATGGATGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: PGARRRKTEQGS*LSSQTLHMDGC Trigger: ACACCCATCCATATGCAGTGTTTGAGAACTAAGGCAGCTCCCTTGCTCTGTTTTCCTGCGCCTAGCCCCCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654543.1 ENST00000654610.1 |
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| CDS CAA 72 bp | TGTGGTAACAAGACTGGTCTGAGCCCCAGGTGTCAGTaGAACCTCCCACAGCAGCAGAGAGGGAGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: CGNKTGLSPRCQ*NLPQQQRGSHL Trigger: CAGATGACTCCCTCTCTGCTGCTGTGGGAGGTTCAACTGACACCTGGGGCTCAGACCAGTCTTGTTACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666528.1 |
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| CDS TCA 72 bp | GCAGAAGTGGGCTCGCGTCTATGCGGGTATTCGAAATaGAAAAGAGCTGCAAACGGCACAAAAGTCCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AEVGSRLCGYSK*KRAANGTKVRG Trigger: CCCCCGGACTTTTGTGCCGTTTGCAGCTCTTTTTCATTTCGAATACCCGCATAGACGCGAGCCCACTTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654543.1 ENST00000654610.1 |
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| CDS CAA 90 bp | CACCAAGCATGTGGTAACAAGACTGGTCTGAGCCCCAGGTGTCAGTaGAACCTCCCACAGCAGCAGAGAGGGAGTCATCTGTATTTATAC | + |
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Preference number: 6 (lower is better) Translates to: HQACGNKTGLSPRCQ*NLPQQQRGSHLYLY Trigger: GTATAAATACAGATGACTCCCTCTCTGCTGCTGTGGGAGGTTCAACTGACACCTGGGGCTCAGACCAGTCTTGTTACCACATGCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666528.1 |
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| CDS TCA 72 bp | CTCCCATCCTTCGTCATACCTTTCTGTCAGCGTTTGTaGGAAACCTGCCCAACAAACCCATCCAATGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPSFVIPFCQRL*ETCPTNPSNAL Trigger: CAGAGCATTGGATGGGTTTGTTGGGCAGGTTTCTCACAAACGCTGACAGAAAGGTATGACGAAGGATGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000652948.1 ENST00000654450.1 ENST00000654543.1 ENST00000654610.1 ENST00000660863.1 ENST00000666528.1 |
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| CDS CAA 72 bp | GAGGTCAAGAGGATGTCCTCCAAAAGGCAGAAGCTCTaGATTTGCCAAGAAAGCTTGAGAAGAGGCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: EVKRMSSKRQKL*ICQESLRRGHL Trigger: CAGGTGGCCTCTTCTCAAGCTTTCTTGGCAAATCAAGAGCTTCTGCCTTTTGGAGGACATCCTCTTGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000654450.1 ENST00000654543.1 ENST00000660863.1 ENST00000661982.1 ENST00000662180.1 ENST00000666528.1 ENST00000667692.1 ENST00000671510.1 |
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| CDS CCA 72 bp | AGCAAGGGAGCTGCCTTAGTTCTCAAACACTGCATATaGATGGGTGTTCCGCGGAAGATTATTCTAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: SKGAALVLKHCI*MGVPRKIILDP Trigger: AGGGTCTAGAATAATCTTCCGCGGAACACCCATCCATATGCAGTGTTTGAGAACTAAGGCAGCTCCCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654543.1 ENST00000654610.1 |
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| CDS CAA 72 bp | GAGGTCAAGAGGATGTCCTCCAAAAGGCAGAAGCTCTaGATTTGCCAAGAAAGCTTGAGAAGAGGCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: EVKRMSSKRQKL*ICQESLRRGHL Trigger: AAGGTGGCCTCTTCTCAAGCTTTCTTGGCAAATCAAGAGCTTCTGCCTTTTGGAGGACATCCTCTTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000465283.6 ENST00000469216.2 ENST00000654610.1 ENST00000655048.1 ENST00000660613.1 ENST00000664320.1 |
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| CDS CAA 90 bp | TATGGGTGGGAGGTCAAGAGGATGTCCTCCAAAAGGCAGAAGCTCTaGATTTGCCAAGAAAGCTTGAGAAGAGGCCACCTTTTCTACAGA | + |
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Preference number: 6 (lower is better) Translates to: YGWEVKRMSSKRQKL*ICQESLRRGHLFYR Trigger: TCTGTAGAAAAGGTGGCCTCTTCTCAAGCTTTCTTGGCAAATCAAGAGCTTCTGCCTTTTGGAGGACATCCTCTTGACCTCCCACCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000465283.6 ENST00000469216.2 ENST00000654610.1 ENST00000655048.1 ENST00000660613.1 ENST00000664320.1 |
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| CDS GCA 72 bp | AAACAGAGCAAGGGAGCTGCCTTAGTTCTCAAACACTaGATATGGATGGGTGTTCCGCGGAAGATTATTCTA | + |
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Preference number: 6 (lower is better) Translates to: KQSKGAALVLKH*IWMGVPRKIIL Trigger: TAGAATAATCTTCCGCGGAACACCCATCCATATGCAGTGTTTGAGAACTAAGGCAGCTCCCTTGCTCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654543.1 ENST00000654610.1 |
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| CDS CAA 72 bp | CTAGGCCAGGATTTCCAGTTGTCAGGCTGTGTGACCTaGGAAAATTGGCTTTACTCCTCTGATCTCTCATTT | + |
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Preference number: 6 (lower is better) Translates to: LGQDFQLSGCVT*ENWLYSSDLSF Trigger: AAATGAGAGATCAGAGGAGTAAAGCCAATTTTCCAAGGTCACACAGCCTGACAACTGGAAATCCTGGCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666528.1 |
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| CDS TCA 72 bp | GAAGACAGTAGTCTCCAGGGTTTGGATTTGTCCCCCTaGATTCTTAGTATCAAAAAGGGCTTGAATGCAACT | + |
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Preference number: 6 (lower is better) Translates to: EDSSLQGLDLSP*ILSIKKGLNAT Trigger: AGTTGCATTCAAGCCCTTTTTGATACTAAGAATTCAGGGGGACAAATCCAAACCCTGGAGACTACTGTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 9 transcripts: ENST00000478772.6 ENST00000655048.1 ENST00000660613.1 ENST00000661982.1 ENST00000662157.1 ENST00000662180.1 ENST00000664320.1 ENST00000667692.1 ENST00000671510.1 |
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| CDS GCA 72 bp | AATAACCATCTAATAAACCATGTGGCTCCCTCTTATTaGAAACAGAGTACATCTTTCCAGAGAATATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: NNHLINHVAPSY*KQSTSFQRIWR Trigger: TCTCCATATTCTCTGGAAAGATGTACTCTGTTTGCAATAAGAGGGAGCCACATGGTTTATTAGATGGTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 19 transcripts: ENST00000465283.6 ENST00000469216.2 ENST00000471091.6 ENST00000478772.6 ENST00000652948.1 ENST00000654450.1 ENST00000654543.1 ENST00000654610.1 ENST00000655048.1 ENST00000660613.1 ENST00000660863.1 ENST00000661982.1 ENST00000662157.1 ENST00000662180.1 ENST00000664320.1 ENST00000666528.1 ENST00000667229.1 ENST00000667692.1 ENST00000671510.1 |
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