Pregenerated sensors for LINC01204 (Homo sapiens)
Ensembl gene IDs: ENSG00000229563Ensembl transcript IDs: ENST00000422047.1, ENST00000435394.5, ENST00000609127.1, ENST00000657646.1, ENST00000657964.1, ENST00000671478.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTTGGGACGTGTCTGGAGTTTCTTCCTCCCAGTGGGTTCATGGTCTaGCTGGCTTCAGGAGTGAAGCTGCAGACCTCCGTGGTGAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: VGTCLEFLPPSGFMV*LASGVKLQTSVVSV Trigger: AACACTCACCACGGAGGTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCATGAACCCACTGGGAGGAAGAAACTCCAGACACGTCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657964.1 |
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| CDS TCA 90 bp | ATAGGGGTAATTCATCAGTGGTGCCACAAACAGGATTGCTGTGCATaGTGTAGTCAGGTGTGCCCGTATACACTGTGGACAGGGCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: IGVIHQWCHKQDCCA*CSQVCPYTLWTGLD Trigger: GTCCAGCCCTGTCCACAGTGTATACGGGCACACCTGACTACATCATGCACAGCAATCCTGTTTGTGGCACCACTGATGAATTACCCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS TCA 90 bp | GAACCAGACCCTGTGGTCCCCTTAGGGTCTCAATGCCTGTTCACTTaGATAGGGGTAATTCATCAGTGGTGCCACAAACAGGATTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: EPDPVVPLGSQCLFT*IGVIHQWCHKQDCC Trigger: ACAGCAATCCTGTTTGTGGCACCACTGATGAATTACCCCTATTCAAGTGAACAGGCATTGAGACCCTAAGGGGACCACAGGGTCTGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CCA 90 bp | ATTTGTGGTGTCTGTGCCCAGTGGTCACAATGGTGGCATCCTTTCTaGACCCATCCTGCAGCATCATTTTGGTGTTGTGCCTTCCCATAT | + |
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Preference number: 5 (lower is better) Translates to: ICGVCAQWSQWWHPF*THPAASFWCCAFPY Trigger: ATATGGGAAGGCACAACACCAAAATGATGCTGCAGGATGGGTCCAGAAAGGATGCCACCATTGTGACCACTGGGCACAGACACCACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CCA 90 bp | AGGATCAATGGGACAATTTGTGGTGTCTGTGCCCAGTGGTCACAATaGTGGCATCCTTTCTGGACCCATCCTGCAGCATCATTTTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: RINGTICGVCAQWSQ*WHPFWTHPAASFWC Trigger: ACACCAAAATGATGCTGCAGGATGGGTCCAGAAAGGATGCCACCATTGTGACCACTGGGCACAGACACCACAAATTGTCCCATTGATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CCA 90 bp | GGACGTTGGCTTCTCTTTTCTCCACAGAGATTGGTTGCTTTTGGCTaGGACGCCAATCCAGTTAGTGATGGTCAGGATGAAAGGTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: GRWLLFSPQRLVAFG*DANPVSDGQDERFG Trigger: ACCAAACCTTTCATCCTGACCATCACTAACTGGATTGGCGTCCCAGCCAAAAGCAACCAATCTCTGTGGAGAAAAGAGAAGCCAACGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000657964.1 |
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| CDS CCA 90 bp | AAAGACTTCTCAGAGGACGTTGGCTTCTCTTTTCTCCACAGAGATTaGTTGCTTTTGGCTGGGACGCCAATCCAGTTAGTGATGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KDFSEDVGFSFLHRD*LLLAGTPIQLVMVR Trigger: CCTGACCATCACTAACTGGATTGGCGTCCCAGCCAAAAGCAACCAATCTCTGTGGAGAAAAGAGAAGCCAACGTCCTCTGAGAAGTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS CCA 90 bp | ATCAATGGGACAATTTGTGGTGTCTGTGCCCAGTGGTCACAATGGTaGCATCCTTTCTGGACCCATCCTGCAGCATCATTTTGGTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: INGTICGVCAQWSQW*HPFWTHPAASFWCC Trigger: ACAACACCAAAATGATGCTGCAGGATGGGTCCAGAAAGGATGCCACCATTGTGACCACTGGGCACAGACACCACAAATTGTCCCATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CCA 90 bp | GCTGTACTTCTCTGGATTTGCCTGTCTCTCCCAATTTCAGAGTGGTaGTCTACCTTGCAACTTCAGCTCTATGTTGGAGCTGAAACCAGA | + |
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Preference number: 5 (lower is better) Translates to: AVLLWICLSLPISEW*STLQLQLYVGAETR Trigger: TCTGGTTTCAGCTCCAACATAGAGCTGAAGTTGCAAGGTAGACCACCACTCTGAAATTGGGAGAGACAGGCAAATCCAGAGAAGTACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS TCA 90 bp | CTAAACTCATTGCTAACATTCAAGGAAGACTGTGTTTGTGGTGAATaGACCAGACCCTGTGGTCCCCTTAGGGTCTCAATGCCTGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LNSLLTFKEDCVCGE*TRPCGPLRVSMPVH Trigger: GTGAACAGGCATTGAGACCCTAAGGGGACCACAGGGTCTGGTTCATTCACCACAAACACAGTCTTCCTTGAATGTTAGCAATGAGTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS TCA 90 bp | CACACATGGCATGGACCAGAGCTACATGATGTGGAAAGAACTGCTTaGGGAAGTTACAACCTAAATACCACAGGTACTAGTGTGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: HTWHGPELHDVERTA*GSYNLNTTGTSVSR Trigger: TCTGGACACACTAGTACCTGTGGTATTTAGGTTGTAACTTCCTCAAGCAGTTCTTTCCACATCATGTAGCTCTGGTCCATGCCATGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657964.1 |
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| CDS TCA 90 bp | AAGGTTTGGTTACCATTGGCACACATGGCATGGACCAGAGCTACATaGTGTGGAAAGAACTGCTTGAGGAAGTTACAACCTAAATACCTC | + |
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Preference number: 5 (lower is better) Translates to: KVWLPLAHMAWTRAT*CGKNCLRKLQPKYL Trigger: GAGGTATTTAGGTTGTAACTTCCTCAAGCAGTTCTTTCCACATCATGTAGCTCTGGTCCATGCCATGTGTGCCAATGGTAACCAAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS TCA 90 bp | AAGGTTTGGTTACCATTGGCACACATGGCATGGACCAGAGCTACATaGTGTGGAAAGAACTGCTTGAGGAAGTTACAACCTAAATACCAC | + |
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Preference number: 5 (lower is better) Translates to: KVWLPLAHMAWTRAT*CGKNCLRKLQPKYH Trigger: GTGGTATTTAGGTTGTAACTTCCTCAAGCAGTTCTTTCCACATCATGTAGCTCTGGTCCATGCCATGTGTGCCAATGGTAACCAAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657964.1 |
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| CDS TCA 90 bp | AGGGAAAATATGCAAGCAAATATGGTAAGTATTCTCCATGGCAGCTaGGGACATCTGGGTGTTCCATCAAATTCGACCTCAAACTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: RENMQANMVSILHGS*GHLGVPSNSTSNSW Trigger: CCAAGAGTTTGAGGTCGAATTTGATGGAACACCCAGATGTCCTCAGCTGCCATGGAGAATACTTACCATATTTGCTTGCATATTTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000671478.1 |
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| CDS GCA 90 bp | GCCAAATCCTGCATCCTCTCAGGTGTTACTTCCCAATATACCTTTTaGCCTTCTAATTCAATTTCAGCATCTGCTTCTCAGAGAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: AKSCILSGVTSQYTF*PSNSISASASQRIQ Trigger: CTGGATTCTCTGAGAAGCAGATGCTGAAATTGAATTAGAAGGGCAAAAGGTATATTGGGAAGTAACACCTGAGAGGATGCAGGATTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS GCA 90 bp | ATGACTTTTGTGGGTCACGTAGAGTTGTGCAGACACAACATTCTTTaGCAAATCCTGCATCCTCTCAGGTGTTACTTCCCAATATACCTT | + |
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Preference number: 5 (lower is better) Translates to: MTFVGHVELCRHNIL*QILHPLRCYFPIYL Trigger: AAGGTATATTGGGAAGTAACACCTGAGAGGATGCAGGATTTGGCAAAGAATGTTGTGTCTGCACAACTCTACGTGACCCACAAAAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CCA 90 bp | CCTTCAAGTTTGGTCATTTATGCTAAAGAAGAAGAAAGTAGGCTCTaGAGGCTGTTCTTTCTCCTATTCAAGGAAACTCCTTCCACATCC | + |
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Preference number: 5 (lower is better) Translates to: PSSLVIYAKEEESRL*RLFFLLFKETPSTS Trigger: GGATGTGGAAGGAGTTTCCTTGAATAGGAGAAAGAACAGCCTCCAGAGCCTACTTTCTTCTTCTTTAGCATAAATGACCAAACTTGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS TCA 90 bp | GCAGTTGAAGAGTACTTGATGTCTTATGATTTGTATAGAAGTCTTTaGGTAGACTCGCTCTCCACTCTCCTGATGCCCTTGAAGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: AVEEYLMSYDLYRSL*VDSLSTLLMPLKKK Trigger: TTTCTTCTTCAAGGGCATCAGGAGAGTGGAGAGCGAGTCTACTCAAAGACTTCTATACAAATCATAAGACATCAAGTACTCTTCAACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609127.1 ENST00000657646.1 |
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| CDS TCA 90 bp | ACCATGGAGCCTCACATCAGCTACATATCAGGCAGACATTTTGTTTaGGGGAGTAAACATTGTATGTTTAAGCTACCACTCATTAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: TMEPHISYISGRHFV*GSKHCMFKLPLIRV Trigger: AACCCTAATGAGTGGTAGCTTAAACATACAATGTTTACTCCCTCAAACAAAATGTCTGCCTGATATGTAGCTGATGTGAGGCTCCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609127.1 |
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| CDS TCA 90 bp | ACATCTGGGTGTTCCATCAAATTCGACCTCAAACTCTTGGGAGTTTaGCCTGCAAGCTTAAAACATACTGGCATTTCCACAAATAAATGT | + |
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Preference number: 5 (lower is better) Translates to: TSGCSIKFDLKLLGV*PASLKHTGISTNKC Trigger: ACATTTATTTGTGGAAATGCCAGTATGTTTTAAGCTTGCAGGTCAAACTCCCAAGAGTTTGAGGTCGAATTTGATGGAACACCCAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS TCA 90 bp | ACATCTGGGTGTTCCATCAAATTCGACCTCAAACTCTTGGGAGTTTaGCCTTCAAGTTTGGTCATTTATGCTAAAGAAGAAGAAAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: TSGCSIKFDLKLLGV*PSSLVIYAKEEESR Trigger: CCTACTTTCTTCTTCTTTAGCATAAATGACCAAACTTGAAGGTCAAACTCCCAAGAGTTTGAGGTCGAATTTGATGGAACACCCAGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS TCA 90 bp | TTATTACTCATAGAAATAGCAGTAGCTAGACTATCAGAATTTCTATaGAGGTTCCCTGAGCTCCAATTCCCACAGGGTAATGGGAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LLLIEIAVARLSEFL*RFPELQFPQGNGKN Trigger: ATTCTTCCCATTACCCTGTGGGAATTGGAGCTCAGGGAACCTTCATAGAAATTCTGATAGTCTAGCTACTGCTATTTCTATGAGTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609127.1 ENST00000657646.1 |
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| CDS TCA 90 bp | AAAGCCTTGGGTTACATCAAAGTTGATATTGGCCCCAAGCTACAGTaGTTAATAGGTTACCTCCTTAATTCACCTCTTTCCTCTATGTTA | + |
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Preference number: 5 (lower is better) Translates to: KALGYIKVDIGPKLQ*LIGYLLNSPLSSML Trigger: TAACATAGAGGAAAGAGGTGAATTAAGGAGGTAACCTATTAATCACTGTAGCTTGGGGCCAATATCAACTTTGATGTAACCCAAGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS CCA 90 bp | ATCAAGCACTTTCTACATAGCAGGTATCATGCTAAGCAATTCAAGTaGATATTTCAATTAATCCTTACAACATCCTTGGGTCTGGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: IKHFLHSRYHAKQFK*IFQLILTTSLGLVP Trigger: AGGCACCAGACCCAAGGATGTTGTAAGGATTAATTGAAATATCCACTTGAATTGCTTAGCATGATACCTGCTATGTAGAAAGTGCTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609127.1 |
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| CDS TCA 90 bp | ATGAATAGTGTTTACCTTCACTTCTGTTCAAGTCTCCTAATGAGATaGCTAAACTCATTGCTAACATTCAAGGAAGACTGTGTTTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: MNSVYLHFCSSLLMR*LNSLLTFKEDCVCG Trigger: ACCACAAACACAGTCTTCCTTGAATGTTAGCAATGAGTTTAGTCATCTCATTAGGAGACTTGAACAGAAGTGAAGGTAAACACTATTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CCA 72 bp | TGTCTGGAGTTTCTTCCTCCCAGTGGGTTCATGGTCTaGCTGGCTTCAGGAGTGAAGCTGCAGACCTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: CLEFLPPSGFMV*LASGVKLQTSV Trigger: CACGGAGGTCTGCAGCTTCACTCCTGAAGCCAGCCAGACCATGAACCCACTGGGAGGAAGAAACTCCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657964.1 |
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| CDS CCA 72 bp | GTCTGTGCCCAGTGGTCACAATGGTGGCATCCTTTCTaGACCCATCCTGCAGCATCATTTTGGTGTTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VCAQWSQWWHPF*THPAASFWCCA Trigger: GGCACAACACCAAAATGATGCTGCAGGATGGGTCCAGAAAGGATGCCACCATTGTGACCACTGGGCACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CCA 72 bp | GGGACAATTTGTGGTGTCTGTGCCCAGTGGTCACAATaGTGGCATCCTTTCTGGACCCATCCTGCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: GTICGVCAQWSQ*WHPFWTHPAAS Trigger: TGATGCTGCAGGATGGGTCCAGAAAGGATGCCACCATTGTGACCACTGGGCACAGACACCACAAATTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CCA 72 bp | GTCCGGAGTTTGTTCCTTCTGATGTTGGGACGTGTCTaGAGTTTCTTCCTCCCAGTGGGTTCATGGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VRSLFLLMLGRV*SFFLPVGSWSG Trigger: GCCAGACCATGAACCCACTGGGAGGAAGAAACTCCAGACACGTCCCAACATCAGAAGGAACAAACTCCGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657964.1 |
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| CDS CAA 72 bp | ATGGCCCCCATGTTCACCCTGTATAATCTCCTCCCCTaGAGTGCAGGTGGAACTGGTGACTTGTTTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: MAPMFTLYNLLP*SAGGTGDLFVT Trigger: GGTTACAAACAAGTCACCAGTTCCACCTGCACTCAAGGGGAGGAGATTATACAGGGTGAACATGGGGGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 72 bp | CAGTTCAGCATCCATGTCCAGGATCAATGGGACAATTaGTGGTGTCTGTGCCCAGTGGTCACAATGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QFSIHVQDQWDN*WCLCPVVTMVA Trigger: TGCCACCATTGTGACCACTGGGCACAGACACCACAAATTGTCCCATTGATCCTGGACATGGATGCTGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CAA 90 bp | CTGGGCCATCGCAAAGGTGGAAATGTTCCCCACACTCAGGGTGATTaGATGCATCCCTGTCTAACAATGAAGGGTTGGCATAGACAACCT | + |
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Preference number: 6 (lower is better) Translates to: LGHRKGGNVPHTQGD*MHPCLTMKGWHRQP Trigger: AGGTTGTCTATGCCAACCCTTCATTGTTAGACAGGGATGCATCAAATCACCCTGAGTGTGGGGAACATTTCCACCTTTGCGATGGCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 90 bp | CTAGCTCTTCTCAGAGGACGTTGGCTTCTCTTTTCTCCACAGAGATaGGTTGCTTTTGGCTGGGACGCCAATCCAGTTAGTGATGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LALLRGRWLLFSPQR*VAFGWDANPVSDGQ Trigger: CTGACCATCACTAACTGGATTGGCGTCCCAGCCAAAAGCAACCAATCTCTGTGGAGAAAAGAGAAGCCAACGTCCTCTGAGAAGAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657964.1 |
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| CDS TCA 72 bp | CCTGTGGTCCCCTTAGGGTCTCAATGCCTGTTCACTTaGATAGGGGTAATTCATCAGTGGTGCCACAAACAG | + |
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Preference number: 6 (lower is better) Translates to: PVVPLGSQCLFT*IGVIHQWCHKQ Trigger: CTGTTTGTGGCACCACTGATGAATTACCCCTATTCAAGTGAACAGGCATTGAGACCCTAAGGGGACCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS GCA 72 bp | GCCTGTCTCTCCCAATTTCAGAGTGGTGGTCTACCTTaGAACTTCAGCTCTATGTTGGAGCTGAAACCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ACLSQFQSGGLP*NFSSMLELKPE Trigger: CTCTGGTTTCAGCTCCAACATAGAGCTGAAGTTGCAAGGTAGACCACCACTCTGAAATTGGGAGAGACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS CCA 72 bp | TCAGAGGACGTTGGCTTCTCTTTTCTCCACAGAGATTaGTTGCTTTTGGCTGGGACGCCAATCCAGTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: SEDVGFSFLHRD*LLLAGTPIQLV Trigger: CACTAACTGGATTGGCGTCCCAGCCAAAAGCAACCAATCTCTGTGGAGAAAAGAGAAGCCAACGTCCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000657964.1 |
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| CDS CAA 72 bp | CTCAGAGGACGTTGGCTTCTCTTTTCTCCACAGAGATaGGTTGCTTTTGGCTGGGACGCCAATCCAGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: LRGRWLLFSPQR*VAFGWDANPVS Trigger: ACTAACTGGATTGGCGTCCCAGCCAAAAGCAACCAATCTCTGTGGAGAAAAGAGAAGCCAACGTCCTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000657964.1 |
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| CDS CAA 72 bp | CCCTGTGGTCCCCTTAGGGTCTCAATGCCTGTTCACTaGAATAGGGGTAATTCATCAGTGGTGCCACAAACA | + |
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Preference number: 6 (lower is better) Translates to: PCGPLRVSMPVH*NRGNSSVVPQT Trigger: TGTTTGTGGCACCACTGATGAATTACCCCTATTCAAGTGAACAGGCATTGAGACCCTAAGGGGACCACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 90 bp | TCAGAGGACGTTGGCTTCTCTTTTCTCCACAGAGATTGGTTGCTTTaGGCTGGGACGCCAATCCAGTTAGTGATGGTCAGGATGAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SEDVGFSFLHRDWLL*AGTPIQLVMVRMKG Trigger: ACCTTTCATCCTGACCATCACTAACTGGATTGGCGTCCCAGCCAAAAGCAACCAATCTCTGTGGAGAAAAGAGAAGCCAACGTCCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000657964.1 |
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| CDS TCA 72 bp | ATTCATCAGTGGTGCCACAAACAGGATTGCTGTGCATaGTGTAGTCAGGTGTGCCCGTATACACTGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: IHQWCHKQDCCA*CSQVCPYTLWT Trigger: TGTCCACAGTGTATACGGGCACACCTGACTACATCATGCACAGCAATCCTGTTTGTGGCACCACTGATGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS TCA 72 bp | CCATCGCAAAGGTGGAAATGTTCCCCACACTCAGGGTaGTTTGATGCATCCCTGTCTAACAATGAAGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: PSQRWKCSPHSG*FDASLSNNEGL Trigger: CAACCCTTCATTGTTAGACAGGGATGCATCAAATCACCCTGAGTGTGGGGAACATTTCCACCTTTGCGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS TCA 72 bp | CTCCAATTCCCACAGGGTAATGGGAAGAATGCCAGGTaGTACCTGCACACACAATGGGTTGCATTACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LQFPQGNGKNAR*YLHTQWVALQK Trigger: CTTCTGTAATGCAACCCATTGTGTGTGCAGGTATCACCTGGCATTCTTCCCATTACCCTGTGGGAATTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609127.1 ENST00000657646.1 |
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| CDS GCA 72 bp | GTGGGTCACGTAGAGTTGTGCAGACACAACATTCTTTaGCAAATCCTGCATCCTCTCAGGTGTTACTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VGHVELCRHNIL*QILHPLRCYFP Trigger: TGGGAAGTAACACCTGAGAGGATGCAGGATTTGGCAAAGAATGTTGTGTCTGCACAACTCTACGTGACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS GCA 72 bp | TCCCACAGGGTAATGGGAAGAATGCCAGGTGATACCTaGACACACAATGGGTTGCATTACAGAAGAATTCCG | + |
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Preference number: 6 (lower is better) Translates to: SHRVMGRMPGDT*THNGLHYRRIP Trigger: CGGAATTCTTCTGTAATGCAACCCATTGTGTGTGCAGGTATCACCTGGCATTCTTCCCATTACCCTGTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609127.1 ENST00000657646.1 |
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| CDS GCA 72 bp | GTGGTCACAATGGTGGCATCCTTTCTGGACCCATCCTaGAGCATCATTTTGGTGTTGTGCCTTCCCATATAT | + |
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Preference number: 6 (lower is better) Translates to: VVTMVASFLDPS*SIILVLCLPIY Trigger: ATATATGGGAAGGCACAACACCAAAATGATGCTGCAGGATGGGTCCAGAAAGGATGCCACCATTGTGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CCA 72 bp | CTCTGGATTTGCCTGTCTCTCCCAATTTCAGAGTGGTaGTCTACCTTGCAACTTCAGCTCTATGTTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LWICLSLPISEW*STLQLQLYVGA Trigger: AGCTCCAACATAGAGCTGAAGTTGCAAGGTAGACCACCACTCTGAAATTGGGAGAGACAGGCAAATCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS CAA 72 bp | TGTGGGTCACGTAGAGTTGTGCAGACACAACATTCTTaGCCAAATCCTGCATCCTCTCAGGTGTTACTTCCC | + |
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Preference number: 6 (lower is better) Translates to: CGSRRVVQTQHS*PNPASSQVLLP Trigger: GGGAAGTAACACCTGAGAGGATGCAGGATTTGGCAAAGAATGTTGTGTCTGCACAACTCTACGTGACCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 72 bp | CGCAAAGGTGGAAATGTTCCCCACACTCAGGGTGATTaGATGCATCCCTGTCTAACAATGAAGGGTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RKGGNVPHTQGD*MHPCLTMKGWH Trigger: ATGCCAACCCTTCATTGTTAGACAGGGATGCATCAAATCACCCTGAGTGTGGGGAACATTTCCACCTTTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 72 bp | ACCACAGGTACTAGTGTGTCCAGAATTGGTGGGTTCTaGGTCTCTCTGATTTCAAGAATGAAGCCTCGGACC | + |
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Preference number: 6 (lower is better) Translates to: TTGTSVSRIGGF*VSLISRMKPRT Trigger: GGTCCGAGGCTTCATTCTTGAAATCAGAGAGACCAAGAACCCACCAATTCTGGACACACTAGTACCTGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657964.1 |
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| CDS CAA 90 bp | AATTCTAGGATGGCCCCCATGTTCACCCTGTATAATCTCCTCCCCTaGAGTGCAGGTGGAACTGGTGACTTGTTTGTAACCAACAGAATA | + |
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Preference number: 6 (lower is better) Translates to: NSRMAPMFTLYNLLP*SAGGTGDLFVTNRI Trigger: TATTCTGTTGGTTACAAACAAGTCACCAGTTCCACCTGCACTCAAGGGGAGGAGATTATACAGGGTGAACATGGGGGCCATCCTAGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS TCA 72 bp | TTGCTAACATTCAAGGAAGACTGTGTTTGTGGTGAATaGACCAGACCCTGTGGTCCCCTTAGGGTCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LLTFKEDCVCGE*TRPCGPLRVSM Trigger: CATTGAGACCCTAAGGGGACCACAGGGTCTGGTTCATTCACCACAAACACAGTCTTCCTTGAATGTTAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CCA 72 bp | GGTCAGGATGAAAGGTTTGGTTACCATTGGCACACATaGCATGGACCAGAGCTACATGATGTGGAAAGAACT | + |
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Preference number: 6 (lower is better) Translates to: GQDERFGYHWHT*HGPELHDVERT Trigger: AGTTCTTTCCACATCATGTAGCTCTGGTCCATGCCATGTGTGCCAATGGTAACCAAACCTTTCATCCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000657964.1 |
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| CDS CCA 72 bp | CTTCTCTTTTCTCCACAGAGATTGGTTGCTTTTGGCTaGGACGCCAATCCAGTTAGTGATGGTCAGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: LLFSPQRLVAFG*DANPVSDGQDE Trigger: TTCATCCTGACCATCACTAACTGGATTGGCGTCCCAGCCAAAAGCAACCAATCTCTGTGGAGAAAAGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000657964.1 |
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| CDS CCA 72 bp | CTTCTCTGGATTTGCCTGTCTCTCCCAATTTCAGAGTaGTGGTCTACCTTGCAACTTCAGCTCTATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLWICLSLPISE*WSTLQLQLYVG Trigger: TCCAACATAGAGCTGAAGTTGCAAGGTAGACCACCACTCTGAAATTGGGAGAGACAGGCAAATCCAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS CCA 72 bp | TACTGTTTCAACTGTAAAGTGGGCAGAATTCTAGGATaGCCCCCATGTTCACCCTGTATAATCTCCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: YCFNCKVGRILG*PPCSPCIISSP Trigger: AGGGGAGGAGATTATACAGGGTGAACATGGGGGCCATCCTAGAATTCTGCCCACTTTACAGTTGAAACAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 90 bp | GGCTTCTGCTCCAGATATGCAAATATTAGCTGTACTTCTCTGGATTaGCCTGTCTCTCCCAATTTCAGAGTGGTGGTCTACCTTGCAACT | + |
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Preference number: 6 (lower is better) Translates to: GFCSRYANISCTSLD*PVSPNFRVVVYLAT Trigger: AGTTGCAAGGTAGACCACCACTCTGAAATTGGGAGAGACAGGCAAATCCAGAGAAGTACAGCTAATATTTGCATATCTGGAGCAGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS TCA 72 bp | TTACCATTGGCACACATGGCATGGACCAGAGCTACATaGTGTGGAAAGAACTGCTTGAGGAAGTTACAACCT | + |
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Preference number: 6 (lower is better) Translates to: LPLAHMAWTRAT*CGKNCLRKLQP Trigger: AGGTTGTAACTTCCTCAAGCAGTTCTTTCCACATCATGTAGCTCTGGTCCATGCCATGTGTGCCAATGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000657964.1 |
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| CDS TCA 72 bp | ATGCAAGCAAATATGGTAAGTATTCTCCATGGCAGCTaGGGACATCTGGGTGTTCCATCAAATTCGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: MQANMVSILHGS*GHLGVPSNSTS Trigger: TGAGGTCGAATTTGATGGAACACCCAGATGTCCTCAGCTGCCATGGAGAATACTTACCATATTTGCTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422047.1 ENST00000671478.1 |
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| CDS GCA 72 bp | CCAGATATGCAAATATTAGCTGTACTTCTCTGGATTTaGCTGTCTCTCCCAATTTCAGAGTGGTGGTCTACC | + |
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Preference number: 6 (lower is better) Translates to: PDMQILAVLLWI*LSLPISEWWST Trigger: GGTAGACCACCACTCTGAAATTGGGAGAGACAGGCAAATCCAGAGAAGTACAGCTAATATTTGCATATCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS GCA 72 bp | AAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATaGTTGTATAGTGGGGATAGTAGGTGCTCAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: KMCVCVCVCVCV*LYSGDSRCSVS Trigger: ACTCACTGAGCACCTACTATCCCCACTATACAAGCATACACACACACACACACACACACACACACACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS CCA 72 bp | TCTGCTCCAGATATGCAAATATTAGCTGTACTTCTCTaGATTTGCCTGTCTCTCCCAATTTCAGAGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SAPDMQILAVLL*ICLSLPISEWW Trigger: CCACCACTCTGAAATTGGGAGAGACAGGCAAATCCAGAGAAGTACAGCTAATATTTGCATATCTGGAGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS CCA 72 bp | AGGATCCAGCTAAGCTGTGACTGGAATCCTGACTTATaGAAGCAGTCTCTAAAGAAAATGATGGCAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RIQLSCDWNPDL*KQSLKKMMAEA Trigger: TGCTTCTGCCATCATTTTCTTTAGAGACTGCTTCCATAAGTCAGGATTCCAGTCACAGCTTAGCTGGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657646.1 |
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| CDS CAA 90 bp | TATGACTTTTGTGGGTCACGTAGAGTTGTGCAGACACAACATTCTTaGCCAAATCCTGCATCCTCTCAGGTGTTACTTCCCAATATACCT | + |
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Preference number: 6 (lower is better) Translates to: YDFCGSRRVVQTQHS*PNPASSQVLLPNIP Trigger: AGGTATATTGGGAAGTAACACCTGAGAGGATGCAGGATTTGGCAAAGAATGTTGTGTCTGCACAACTCTACGTGACCCACAAAAGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 90 bp | AGGGTAATGGGAAGAATGCCAGGTGATACCTGCACACACAATGGGTaGCATTACAGAAGAATTCCGAGCTTAGGGAACTTGAATCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RVMGRMPGDTCTHNG*HYRRIPSLGNLNLL Trigger: TAAAAGATTCAAGTTCCCTAAGCTCGGAATTCTTCTGTAATGCAACCCATTGTGTGTGCAGGTATCACCTGGCATTCTTCCCATTACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000609127.1 ENST00000657646.1 |
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| CDS GCA 72 bp | CAGAAGATAAGAGAGTCTTGTCTTGCTTACAAGTTGTaGAGAAACATGAGAGAGCTGTGGAAATTGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: QKIRESCLAYKL*RNMRELWKLSP Trigger: GGGAGACAATTTCCACAGCTCTCTCATGTTTCTGCACAACTTGTAAGCAAGACAAGACTCTCTTATCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609127.1 ENST00000657646.1 |
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| CDS CCA 72 bp | GAAGAAGATATTAGTGAACCCCAACATGTGAGGGACTaGCAAAAAGAAAGTAGCCACCAGAGAATACTATCC | + |
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Preference number: 6 (lower is better) Translates to: EEDISEPQHVRD*QKESSHQRILS Trigger: GGATAGTATTCTCTGGTGGCTACTTTCTTTTTGCCAGTCCCTCACATGTTGGGGTTCACTAATATCTTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 72 bp | GTGTTCCATCAAATTCGACCTCAAACTCTTGGGAGTTaGACCTGCAAGCTTAAAACATACTGGCATTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VFHQIRPQTLGS*TCKLKTYWHFH Trigger: GTGGAAATGCCAGTATGTTTTAAGCTTGCAGGTCAAACTCCCAAGAGTTTGAGGTCGAATTTGATGGAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS CAA 72 bp | TCCAGATATGCAAATATTAGCTGTACTTCTCTGGATTaGCCTGTCTCTCCCAATTTCAGAGTGGTGGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SRYANISCTSLD*PVSPNFRVVVY Trigger: GTAGACCACCACTCTGAAATTGGGAGAGACAGGCAAATCCAGAGAAGTACAGCTAATATTTGCATATCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS TCA 72 bp | TGTTCCATCAAATTCGACCTCAAACTCTTGGGAGTTTaGCCTGCAAGCTTAAAACATACTGGCATTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: CSIKFDLKLLGV*PASLKHTGIST Trigger: TGTGGAAATGCCAGTATGTTTTAAGCTTGCAGGTCAAACTCCCAAGAGTTTGAGGTCGAATTTGATGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS GCA 72 bp | TGCATCCTCTCAGGTGTTACTTCCCAATATACCTTTTaGCCTTCTAATTCAATTTCAGCATCTGCTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: CILSGVTSQYTF*PSNSISASASQ Trigger: CTGAGAAGCAGATGCTGAAATTGAATTAGAAGGGCAAAAGGTATATTGGGAAGTAACACCTGAGAGGATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 90 bp | TCCCAATTTCAGAGTGGTGGTCTACCTTGCAACTTCAGCTCTATGTaGGAGCTGAAACCAGAGGTTCCCAATTCATTTTATGATATGAAT | + |
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Preference number: 6 (lower is better) Translates to: SQFQSGGLPCNFSSM*ELKPEVPNSFYDMN Trigger: ATTCATATCATAAAATGAATTGGGAACCTCTGGTTTCAGCTCCAACATAGAGCTGAAGTTGCAAGGTAGACCACCACTCTGAAATTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422047.1 |
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| CDS CAA 90 bp | ACACACAATGGGTTGCATTACAGAAGAATTCCGAGCTTAGGGAACTaGAATCTTTTAAAATGGAAAGTAGCATTTATGCCCTTCGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: THNGLHYRRIPSLGN*NLLKWKVAFMPFAQ Trigger: CTGAGCGAAGGGCATAAATGCTACTTTCCATTTTAAAAGATTCAAGTTCCCTAAGCTCGGAATTCTTCTGTAATGCAACCCATTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000609127.1 ENST00000657646.1 |
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| CDS TCA 72 bp | CCTCACATCAGCTACATATCAGGCAGACATTTTGTTTaGGGGAGTAAACATTGTATGTTTAAGCTACCACTC | + |
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Preference number: 6 (lower is better) Translates to: PHISYISGRHFV*GSKHCMFKLPL Trigger: GAGTGGTAGCTTAAACATACAATGTTTACTCCCTCAAACAAAATGTCTGCCTGATATGTAGCTGATGTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609127.1 |
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| CDS TCA 72 bp | GGTTACATCAAAGTTGATATTGGCCCCAAGCTACAGTaGTTAATAGGTTACCTCCTTAATTCACCTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GYIKVDIGPKLQ*LIGYLLNSPLS Trigger: GGAAAGAGGTGAATTAAGGAGGTAACCTATTAATCACTGTAGCTTGGGGCCAATATCAACTTTGATGTAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS CCA 72 bp | TTGGTCATTTATGCTAAAGAAGAAGAAAGTAGGCTCTaGAGGCTGTTCTTTCTCCTATTCAAGGAAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LVIYAKEEESRL*RLFFLLFKETP Trigger: AGGAGTTTCCTTGAATAGGAGAAAGAACAGCCTCCAGAGCCTACTTTCTTCTTCTTTAGCATAAATGACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS TCA 72 bp | GTTTACCTTCACTTCTGTTCAAGTCTCCTAATGAGATaGCTAAACTCATTGCTAACATTCAAGGAAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: VYLHFCSSLLMR*LNSLLTFKEDC Trigger: ACAGTCTTCCTTGAATGTTAGCAATGAGTTTAGTCATCTCATTAGGAGACTTGAACAGAAGTGAAGGTAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS TCA 72 bp | TGTTCCATCAAATTCGACCTCAAACTCTTGGGAGTTTaGCCTTCAAGTTTGGTCATTTATGCTAAAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: CSIKFDLKLLGV*PSSLVIYAKEE Trigger: TTCTTCTTTAGCATAAATGACCAAACTTGAAGGTCAAACTCCCAAGAGTTTGAGGTCGAATTTGATGGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS TCA 72 bp | TATAATAAAGCCGAAAGCCTTGGGTTACATCAAAGTTaGTATTGGCCCCAAGCTACAGTGATTAATAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: YNKAESLGLHQS*YWPQATVINRL Trigger: TAACCTATTAATCACTGTAGCTTGGGGCCAATATCAACTTTGATGTAACCCAAGGCTTTCGGCTTTATTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671478.1 |
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| CDS CAA 90 bp | CAGTCTTTGCAAAGTCCATTTGTTGTTCTGCTAAAATCTAAACATTaGCAAAGTGGTGTGCAGTATCTGGATTCCCTAAAACACATTGAT | + |
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Preference number: 6 (lower is better) Translates to: QSLQSPFVVLLKSKH*QSGVQYLDSLKHID Trigger: ATCAATGTGTTTTAGGGAATCCAGATACTGCACACCACTTTGCAAATGTTTAGATTTTAGCAGAACAACAAATGGACTTTGCAAAGACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609127.1 |
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| CDS CAA 72 bp | CAGGTATGCTTTCAAAAGGCAGAGAACTGTAGTCCTTaGTTTACATATCTTACTACCTACCACGTTATATTT | + |
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Preference number: 6 (lower is better) Translates to: QVCFQKAENCSP*FTYLTTYHVIF Trigger: AAATATAACGTGGTAGGTAGTAAGATATGTAAACAAAGGACTACAGTTCTCTGCCTTTTGAAAGCATACCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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| CDS CAA 72 bp | CAAAGTCCATTTGTTGTTCTGCTAAAATCTAAACATTaGCAAAGTGGTGTGCAGTATCTGGATTCCCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: QSPFVVLLKSKH*QSGVQYLDSLK Trigger: TTTTAGGGAATCCAGATACTGCACACCACTTTGCAAATGTTTAGATTTTAGCAGAACAACAAATGGACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609127.1 |
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| CDS CAA 72 bp | CAAAGAGTACCTTTTTACCATGTTCCCTTTAAATCCTaGAAATACTGGGGAATCTTGTGCTTACTAATCTTA | + |
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Preference number: 6 (lower is better) Translates to: QRVPFYHVPFKS*KYWGILCLLIL Trigger: TAAGATTAGTAAGCACAAGATTCCCCAGTATTTCAAGGATTTAAAGGGAACATGGTAAAAAGGTACTCTTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435394.5 |
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