Pregenerated sensors for LINC01203 (Homo sapiens)
Ensembl gene IDs: ENSG00000226985Ensembl transcript IDs: ENST00000419566.5, ENST00000420403.1, ENST00000446964.1, ENST00000456091.2, ENST00000653729.1, ENST00000655502.1, ENST00000656111.1, ENST00000656271.1, ENST00000656410.1, ENST00000656979.1, ENST00000659191.1, ENST00000659526.1, ENST00000660305.1, ENST00000661104.1, ENST00000661464.1, ENST00000661545.1, ENST00000661629.1, ENST00000665887.1, ENST00000667532.1, ENST00000667868.1, ENST00000668192.1, ENST00000669963.1, ENST00000671651.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGCCACATGGAGCTAGTGGCTTTGTCATAGACGAACTTCTCCTATaGATGAAAGGCTGTTCCCTTCTTCTCTCACACGGTCCTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RPHGASGFVIDELLL*MKGCSLLLSHGPFF Trigger: GAAGAAAGGACCGTGTGAGAGAAGAAGGGAACAGCCTTTCATCCATAGGAGAAGTTCGTCTATGACAAAGCCACTAGCTCCATGTGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000420403.1 ENST00000446964.1 ENST00000656410.1 ENST00000656979.1 ENST00000659191.1 ENST00000660305.1 ENST00000661104.1 ENST00000661545.1 ENST00000665887.1 ENST00000668192.1 |
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| CDS CCA 90 bp | TTCAACCAATTGCCAATCAGAAAATGTTTAAATCTACCTATGACCTaGAAGCCCGACTCCTGCTTCGAGTTGCCCCACCCTTCCAGATCG | + |
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Preference number: 5 (lower is better) Translates to: FNQLPIRKCLNLPMT*KPDSCFELPHPSRS Trigger: CGATCTGGAAGGGTGGGGCAACTCGAAGCAGGAGTCGGGCTTCCAGGTCATAGGTAGATTTAAACATTTTCTGATTGGCAATTGGTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS CCA 90 bp | GCTAGGAAGTCAATCAATCAATCTGGTCAATTAACAGAGGATACATaGAGTAAACAAAAACAGCCCGGGGAACAGAGTAGTCTGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: ARKSINQSGQLTEDT*SKQKQPGEQSSLRS Trigger: AGATCTCAGACTACTCTGTTCCCCGGGCTGTTTTTGTTTACTCCATGTATCCTCTGTTAATTGACCAGATTGATTGATTGACTTCCTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660305.1 |
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| CDS TCA 90 bp | TTTCTCTCTACTACTTACCTGCAAACAAACCCACAATTGCTACTATaGCATGCAACTCCATGGTTAATTCCTTGGATAGCAAATAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: FLSTTYLQTNPQLLL*HATPWLIPWIANSS Trigger: CGAGCTATTTGCTATCCAAGGAATTAACCATGGAGTTGCATGTCATAGTAGCAATTGTGGGTTTGTTTGCAGGTAAGTAGTAGAGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661464.1 ENST00000661629.1 |
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| CDS TCA 90 bp | TTGCCCCACCCTTCCAGATCGAAACAATGTAAACCTTACATGTATTaGCTGATGTATTATGTCTCCCTAAAATGTATAAAGGCAAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LPHPSRSKQCKPYMY*LMYYVSLKCIKASC Trigger: ACAGCTTGCCTTTATACATTTTAGGGAGACATAATACATCAGTCAATACATGTAAGGTTTACATTGTTTCGATCTGGAAGGGTGGGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS TCA 90 bp | ATTGAAGTATTATGTGTCAGGGATACACACAAATGTGGGGGAATATaGAAGGTCTTGGAGGCTGTCTTCATAAATATCCAGTTACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: IEVLCVRDTHKCGGI*KVLEAVFINIQLLP Trigger: AGGAAGTAACTGGATATTTATGAAGACAGCCTCCAAGACCTTTCATATTCCCCCACATTTGTGTGTATCCCTGACACATAATACTTCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000659526.1 ENST00000667532.1 |
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| CDS GCA 90 bp | ATTCACTACCATCATTCCAAGAACCATCAAGTATACCTGGAATCTTaGAGTACTGCAAGGTCTATAGCACTGTTACAGATACCATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: IHYHHSKNHQVYLES*STARSIALLQIPFS Trigger: AGAAAATGGTATCTGTAACAGTGCTATAGACCTTGCAGTACTGCAAGATTCCAGGTATACTTGATGGTTCTTGGAATGATGGTAGTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661464.1 ENST00000661629.1 |
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| CDS CAA 90 bp | CCTTGTTTGACTGTAGGTCATAACACCCCCACTCCAGAGAGGGTCTaGCCTTACACCCAGAAGGAAGGAACGCTGCTCAGAGAGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PCLTVGHNTPTPERV*PYTQKEGTLLREAK Trigger: CTTGGCCTCTCTGAGCAGCGTTCCTTCCTTCTGGGTGTAAGGCAAGACCCTCTCTGGAGTGGGGGTGTTATGACCTACAGTCAAACAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000656111.1 ENST00000659526.1 |
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| CDS CAA 72 bp | ACTGTAGGTCATAACACCCCCACTCCAGAGAGGGTCTaGCCTTACACCCAGAAGGAAGGAACGCTGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TVGHNTPTPERV*PYTQKEGTLLR Trigger: TCTGAGCAGCGTTCCTTCCTTCTGGGTGTAAGGCAAGACCCTCTCTGGAGTGGGGGTGTTATGACCTACAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000656111.1 ENST00000659526.1 ENST00000661464.1 ENST00000671651.1 |
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| CDS CAA 90 bp | TCTTGTTTGACTGTAGGTCATAACACCCCCACTCCAGAGAGGGTCTaGCCTTACACCCAGAAGGAAGGAACGCTGCTCAGAGAGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: SCLTVGHNTPTPERV*PYTQKEGTLLREAK Trigger: CTTGGCCTCTCTGAGCAGCGTTCCTTCCTTCTGGGTGTAAGGCAAGACCCTCTCTGGAGTGGGGGTGTTATGACCTACAGTCAAACAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000661464.1 ENST00000671651.1 |
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| CDS CAA 72 bp | AGCCAGTCACGGGCAGTCAACTGTTCAAACCCTTGTTaGACTGTAGGTCATAACACCCCCACTCCAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SQSRAVNCSNPC*TVGHNTPTPER Trigger: CCTCTCTGGAGTGGGGGTGTTATGACCTACAGTCAAACAAGGGTTTGAACAGTTGACTGCCCGTGACTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659526.1 |
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| CDS CAA 90 bp | CAGAGTTTCAGCCAGTCACGGGCAGTCAACTGTTCAAACCCTTGTTaGACTGTAGGTCATAACACCCCCACTCCAGAGAGGGTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: QSFSQSRAVNCSNPC*TVGHNTPTPERVLP Trigger: AGGCAAGACCCTCTCTGGAGTGGGGGTGTTATGACCTACAGTCAAACAAGGGTTTGAACAGTTGACTGCCCGTGACTGGCTGAAACTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659526.1 |
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| CDS GCA 72 bp | TGTTTAAATCTACCTATGACCTGGAAGCCCGACTCCTaGTTCGAGTTGCCCCACCCTTCCAGATCGAAACAA | + |
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Preference number: 6 (lower is better) Translates to: CLNLPMTWKPDS*FELPHPSRSKQ Trigger: TTGTTTCGATCTGGAAGGGTGGGGCAACTCGAAGCAGGAGTCGGGCTTCCAGGTCATAGGTAGATTTAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS GCA 72 bp | AAATGTATAAAGGCAAGCTGTACCCTGACCACCTTGTaGACATGTAATCTGGACCTCCTGAGGCTGTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: KCIKASCTLTTL*TCNLDLLRLCH Trigger: GTGACACAGCCTCAGGAGGTCCAGATTACATGTGCACAAGGTGGTCAGGGTACAGCTTGCCTTTATACATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS GCA 72 bp | ATGATCTCTCCATCTTCTCATCCCCAGATGTCCTGCTaGTCCTGTGTTGCAGGAAGTCTCAGGAATGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: MISPSSHPQMSC*SCVAGSLRNEV Trigger: AACTTCATTCCTGAGACTTCCTGCAACACAGGAGCAGCAGGACATCTGGGGATGAGAAGATGGAGAGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656979.1 ENST00000659191.1 ENST00000661464.1 ENST00000661629.1 ENST00000667868.1 |
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| CDS GCA 72 bp | AGATGGGCTGGGCTGTGTTTTAGGCCCACATTATCATaGACATCCATACGAGCAATGACCCCTGTTAACTAT | + |
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Preference number: 6 (lower is better) Translates to: RWAGLCFRPTLS*TSIRAMTPVNY Trigger: ATAGTTAACAGGGGTCATTGCTCGTATGGATGTGCATGATAATGTGGGCCTAAAACACAGCCCAGCCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669963.1 |
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| CDS CAA 72 bp | CTAAAATGTATAAAGGCAAGCTGTACCCTGACCACCTaGTGCACATGTAATCTGGACCTCCTGAGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LKCIKASCTLTT*CTCNLDLLRLC Trigger: ACACAGCCTCAGGAGGTCCAGATTACATGTGCACAAGGTGGTCAGGGTACAGCTTGCCTTTATACATTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS CAA 90 bp | ACGCTGCTCAGAGAGGCCAAGAAGAATCTAGACAGACAGGCCTTGTaGGGTTTCCACACTCAGTCCATTAGCTTTAGATCACAACATTTT | + |
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Preference number: 6 (lower is better) Translates to: TLLREAKKNLDRQAL*GFHTQSISFRSQHF Trigger: AAAATGTTGTGATCTAAAGCTAATGGACTGAGTGTGGAAACCCAACAAGGCCTGTCTGTCTAGATTCTTCTTGGCCTCTCTGAGCAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000656111.1 ENST00000659526.1 ENST00000661464.1 ENST00000671651.1 |
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| CDS CCA 72 bp | GTGGACTTTATACTAACAACATATCTCAATTCAGACTaGCCACATTTTGAGTGCTCAGCGGCCACATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VDFILTTYLNSD*PHFECSAATWS Trigger: GCTCCATGTGGCCGCTGAGCACTCAAAATGTGGCCAGTCTGAATTGAGATATGTTGTTAGTATAAAGTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000420403.1 ENST00000446964.1 ENST00000656410.1 ENST00000656979.1 ENST00000659191.1 ENST00000660305.1 ENST00000661104.1 ENST00000661545.1 ENST00000665887.1 ENST00000668192.1 |
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| CDS CCA 72 bp | ACACATTTACAGTCTATTTCTCTGAAGCCTGCTACCTaGAGGCTTCATCTGCATGATAAAACCTTGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: THLQSISLKPAT*RLHLHDKTLAS Trigger: GGAGGCCAAGGTTTTATCATGCAGATGAAGCCTCCAGGTAGCAGGCTTCAGAGAAATAGACTGTAAATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS CAA 72 bp | TTTGTCCAATCATATTTCTGCACAGCTGTCCACACTTaGTTGAACTGGAAAGGCGTGATACGAAGGCGACTC | + |
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Preference number: 6 (lower is better) Translates to: FVQSYFCTAVHT*LNWKGVIRRRL Trigger: GAGTCGCCTTCGTATCACGCCTTTCCAGTTCAACAAAGTGTGGACAGCTGTGCAGAAATATGATTGGACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000656111.1 ENST00000659526.1 ENST00000661464.1 ENST00000671651.1 |
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| CDS CAA 72 bp | AGAGAGGCCAAGAAGAATCTAGACAGACAGGCCTTGTaGGGTTTCCACACTCAGTCCATTAGCTTTAGATCA | + |
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Preference number: 6 (lower is better) Translates to: REAKKNLDRQAL*GFHTQSISFRS Trigger: TGATCTAAAGCTAATGGACTGAGTGTGGAAACCCAACAAGGCCTGTCTGTCTAGATTCTTCTTGGCCTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000656111.1 ENST00000659526.1 ENST00000661464.1 ENST00000671651.1 |
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| CDS CAA 72 bp | CTTGGAGGCTGTCTTCATAAATATCCAGTTACTTCCTaGTACCAATCACAGAGTTTCAGCCAGTCACGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGGCLHKYPVTS*YQSQSFSQSRA Trigger: TGCCCGTGACTGGCTGAAACTCTGTGATTGGTACAAGGAAGTAACTGGATATTTATGAAGACAGCCTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659526.1 ENST00000667532.1 |
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| CDS CAA 90 bp | TCTCTGAAGCCTGCTACCTGGAGGCTTCATCTGCATGATAAAACCTaGGCCTCCACAACCACTTATCATAACCCAAACAATTCTTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SLKPATWRLHLHDKT*ASTTTYHNPNNSFY Trigger: GTAGAAAGAATTGTTTGGGTTATGATAAGTGGTTGTGGAGGCCAAGGTTTTATCATGCAGATGAAGCCTCCAGGTAGCAGGCTTCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS CAA 90 bp | ATGAAAGGTCTTGGAGGCTGTCTTCATAAATATCCAGTTACTTCCTaGTACCAATCACAGAGTTTCAGCCAGTCACGGGCAGTCAACTGT | + |
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Preference number: 6 (lower is better) Translates to: MKGLGGCLHKYPVTS*YQSQSFSQSRAVNC Trigger: ACAGTTGACTGCCCGTGACTGGCTGAAACTCTGTGATTGGTACAAGGAAGTAACTGGATATTTATGAAGACAGCCTCCAAGACCTTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659526.1 ENST00000667532.1 |
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| CDS TCA 72 bp | AGATCAATACCACTGTCAGGTAAGACGGTCATTTCTTaGCAGGACACCTGTAAAAATCCCCTGGTTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: RSIPLSGKTVIS*QDTCKNPLVTA Trigger: AGCAGTAACCAGGGGATTTTTACAGGTGTCCTGTCAAGAAATGACCGTCTTACCTGACAGTGGTATTGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000661545.1 ENST00000669963.1 |
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| CDS TCA 72 bp | TTAGGCCCACATTATCATGCACATCCATACGAGCAATaGCCCCTGTTAACTATTACTGATAGGCTCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: LGPHYHAHPYEQ*PLLTITDRLTV Trigger: CACAGTGAGCCTATCAGTAATAGTTAACAGGGGTCATTGCTCGTATGGATGTGCATGATAATGTGGGCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669963.1 |
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| CDS CCA 72 bp | CTGCTACCTGGAGGCTTCATCTGCATGATAAAACCTTaGCCTCCACAACCACTTATCATAACCCAAACAATT | + |
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Preference number: 6 (lower is better) Translates to: LLPGGFICMIKP*PPQPLIITQTI Trigger: AATTGTTTGGGTTATGATAAGTGGTTGTGGAGGCCAAGGTTTTATCATGCAGATGAAGCCTCCAGGTAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000669963.1 |
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| CDS CAA 72 bp | GCAGCAGTGTATTTCCACAGCACTCTTAAACTCGGCTaGGATTCTCTACAATGGCTTTTTGAGAGTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: AAVYFHSTLKLG*DSLQWLFESDA Trigger: AGCATCACTCTCAAAAAGCCATTGTAGAGAATCCAAGCCGAGTTTAAGAGTGCTGTGGAAATACACTGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 19 transcripts: ENST00000456091.2 ENST00000653729.1 ENST00000655502.1 ENST00000656111.1 ENST00000656271.1 ENST00000656410.1 ENST00000656979.1 ENST00000659191.1 ENST00000659526.1 ENST00000660305.1 ENST00000661104.1 ENST00000661464.1 ENST00000661545.1 ENST00000665887.1 ENST00000667532.1 ENST00000667868.1 ENST00000668192.1 ENST00000669963.1 ENST00000671651.1 |
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| CDS TCA 72 bp | GACAGGATCCTGCAAACAAACCCACAATTGCTACTATaGCATGCAACTCCATGGTTAATTCCTTGGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: DRILQTNPQLLL*HATPWLIPWIA Trigger: TGCTATCCAAGGAATTAACCATGGAGTTGCATGTCATAGTAGCAATTGTGGGTTTGTTTGCAGGATCCTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419566.5 ENST00000456091.2 |
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| CDS TCA 72 bp | TTTGTTGAGTTGCATGGGTCAGGAAGGACCCTCCAATaGAGTAAAAGTTTAGATGGATCTGTGTTGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: FVELHGSGRTLQ*SKSLDGSVLQE Trigger: TTCCTGCAACACAGATCCATCTAAACTTTTACTTCATTGGAGGGTCCTTCCTGACCCATGCAACTCAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000456091.2 ENST00000655502.1 ENST00000656271.1 ENST00000656410.1 ENST00000659526.1 ENST00000661545.1 ENST00000665887.1 ENST00000668192.1 ENST00000669963.1 |
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| CDS CCA 72 bp | CAGCAGTGTATTTCCACAGCACTCTTAAACTCGGCTTaGATTCTCTACAATGGCTTTTTGAGAGTGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: QQCISTALLNSA*ILYNGFLRVML Trigger: AAGCATCACTCTCAAAAAGCCATTGTAGAGAATCCAAGCCGAGTTTAAGAGTGCTGTGGAAATACACTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 19 transcripts: ENST00000456091.2 ENST00000653729.1 ENST00000655502.1 ENST00000656111.1 ENST00000656271.1 ENST00000656410.1 ENST00000656979.1 ENST00000659191.1 ENST00000659526.1 ENST00000660305.1 ENST00000661104.1 ENST00000661464.1 ENST00000661545.1 ENST00000665887.1 ENST00000667532.1 ENST00000667868.1 ENST00000668192.1 ENST00000669963.1 ENST00000671651.1 |
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| CDS TCA 72 bp | GTAGTGTTGATTATCAACTATTCTTGCCTTATATGCTaGTTTCAATACTTAACCCCACCTCTGATCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: VVLIINYSCLIC*FQYLTPPLIPC Trigger: GCAGGGGATCAGAGGTGGGGTTAAGTATTGAAATCAGCATATAAGGCAAGAATAGTTGATAATCAACACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656271.1 |
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| CDS CAA 90 bp | TATTCACTACCATCATTCCAAGAACCATCAAGTATACCTGGAATCTaGCAGTACTGCAAGGTCTATAGCACTGTTACAGATACCATTTTC | + |
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Preference number: 6 (lower is better) Translates to: YSLPSFQEPSSIPGI*QYCKVYSTVTDTIF Trigger: GAAAATGGTATCTGTAACAGTGCTATAGACCTTGCAGTACTGCAAGATTCCAGGTATACTTGATGGTTCTTGGAATGATGGTAGTGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661464.1 ENST00000661629.1 |
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| CDS CAA 72 bp | GGAGTTTTAGAGAGTAGTGTTGATTATCAACTATTCTaGCCTTATATGCTGATTTCAATACTTAACCCCACC | + |
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Preference number: 6 (lower is better) Translates to: GVLESSVDYQLF*PYMLISILNPT Trigger: GGTGGGGTTAAGTATTGAAATCAGCATATAAGGCAAGAATAGTTGATAATCAACACTACTCTCTAAAACTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656271.1 |
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| CDS TCA 72 bp | AATGAGTTTACATTAGTAACAACATATATCCCTTTGTaGGAGAGAGGTGATGTGTCATACTTAGCAAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: NEFTLVTTYIPL*ERGDVSYLAKR Trigger: CCTTTTTGCTAAGTATGACACATCACCTCTCTCTCACAAAGGGATATATGTTGTTACTAATGTAAACTCATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000653729.1 ENST00000655502.1 ENST00000661464.1 ENST00000669963.1 |
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