RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01202 (Homo sapiens)

Ensembl gene IDs: ENSG00000280776

Ensembl transcript IDs: ENST00000625268.2

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GAATGGTGCACCAGGAGCACACCCGGCCAGGACAGGAGACAGGATTaGAGAATTTCCCAAGGACCTGACATTCGTTCAGTACTGATTCAA +
Preference number: 5 (lower is better)
Translates to: EWCTRSTPGQDRRQD*RISQGPDIRSVLIQ
Trigger: TTGAATCAGTACTGAACGAATGTCAGGTCCTTGGGAAATTCTCCAATCCTGTCTCCTGTCCTGGCCGGGTGTGCTCCTGGTGCACCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS GCA 90 bp GGTACAAAGGTCTCCCAAATAGTTCAAATTGACTTAGTCGAATGGTaGACCAGGAGCACACCCGGCCAGGACAGGAGACAGGATTGGAGA +
Preference number: 5 (lower is better)
Translates to: GTKVSQIVQIDLVEW*TRSTPGQDRRQDWR
Trigger: TCTCCAATCCTGTCTCCTGTCCTGGCCGGGTGTGCTCCTGGTGCACCATTCGACTAAGTCAATTTGAACTATTTGGGAGACCTTTGTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 90 bp GTAGGTACAAAGGTCTCCCAAATAGTTCAAATTGACTTAGTCGAATaGTGCACCAGGAGCACACCCGGCCAGGACAGGAGACAGGATTGG +
Preference number: 5 (lower is better)
Translates to: VGTKVSQIVQIDLVE*CTRSTPGQDRRQDW
Trigger: CCAATCCTGTCTCCTGTCCTGGCCGGGTGTGCTCCTGGTGCACCATTCGACTAAGTCAATTTGAACTATTTGGGAGACCTTTGTACCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 90 bp ACCCGGCCAGGACAGGAGACAGGATTGGAGAATTTCCCAAGGACCTaGCATTCGTTCAGTACTGATTCAAGTAGTGTTGGTGGAGGTTGT +
Preference number: 5 (lower is better)
Translates to: TRPGQETGLENFPRT*HSFSTDSSSVGGGC
Trigger: ACAACCTCCACCAACACTACTTGAATCAGTACTGAACGAATGTCAGGTCCTTGGGAAATTCTCCAATCCTGTCTCCTGTCCTGGCCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 90 bp AGCAGAAGGAAACGTAGGTACAAAGGTCTCCCAAATAGTTCAAATTaGCTTAGTCGAATGGTGCACCAGGAGCACACCCGGCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: SRRKRRYKGLPNSSN*LSRMVHQEHTRPGQ
Trigger: CTGTCCTGGCCGGGTGTGCTCCTGGTGCACCATTCGACTAAGTCAATTTGAACTATTTGGGAGACCTTTGTACCTACGTTTCCTTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 90 bp ACACCAGAAAGGAAGTTCTCCATCTGTGTAAGGGGAGGAGGGAAATaGGTGGGCCAGGAAAGCATATATGGAGGACGTGGGGTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: TPERKFSICVRGGGK*VGQESIYGGRGVLK
Trigger: TTTTAAGACCCCACGTCCTCCATATATGCTTTCCTGGCCCACCCATTTCCCTCCTCCCCTTACACAGATGGAGAACTTCCTTTCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 90 bp GGAAAGGCTCAGCACATAAAAGCACTAGCAATCTGTGCTGAGTGCTaGGAGAACACCAGAAAGGAAGTTCTCCATCTGTGTAAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GKAQHIKALAICAEC*ENTRKEVLHLCKGR
Trigger: CCTCCCCTTACACAGATGGAGAACTTCCTTTCTGGTGTTCTCTCAGCACTCAGCACAGATTGCTAGTGCTTTTATGTGCTGAGCCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 90 bp AGACAGCAGATTGTCGTGTCTGATACTGGGGGTGGCAGTGGGAACTaGTTGGAATTGAGCATGAGGGATCTTTTTGGCACAATGGAAATG +
Preference number: 5 (lower is better)
Translates to: RQQIVVSDTGGGSGN*LELSMRDLFGTMEM
Trigger: CATTTCCATTGTGCCAAAAAGATCCCTCATGCTCAATTCCAACCAGTTCCCACTGCCACCCCCAGTATCAGACACGACAATCTGCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 90 bp AGATTCAACCCACCTCCTTACACACTGTGTGCATACTTCCACACTTaGACAAAGGTATTCCCTGTAGGCAATAAGATAATACAGCACCTG +
Preference number: 5 (lower is better)
Translates to: RFNPPPYTLCAYFHT*TKVFPVGNKIIQHL
Trigger: CAGGTGCTGTATTATCTTATTGCCTACAGGGAATACCTTTGTTCAAGTGTGGAAGTATGCACACAGTGTGTAAGGAGGTGGGTTGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 90 bp CTCTTCAGACTACCAGTGGGAGTTGGTAAATTGACATATGGAAACTaGATCCACATACTGGGAGGCCAGTTGTCCTCATCAATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LFRLPVGVGKLTYGN*IHILGGQLSSSIFF
Trigger: AAAGAAAATTGATGAGGACAACTGGCCTCCCAGTATGTGGATTCAGTTTCCATATGTCAATTTACCAACTCCCACTGGTAGTCTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS GCA 72 bp CCCAGGCTGGAAGGCAGTGGCCCGATCTCCGCTCTCTaGAAGCTCCGCCTCCCGAGTAAAAATAGGCTAAAT +
Preference number: 6 (lower is better)
Translates to: PRLEGSGPISAL*KLRLPSKNRLN
Trigger: ATTTAGCCTATTTTTACTCGGGAGGCGGAGCTTGCAGAGAGCGGAGATCGGGCCACTGCCTTCCAGCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 72 bp AGGAAGTTCTCCATCTGTGTAAGGGGAGGAGGGAAATaGGTGGGCCAGGAAAGCATATATGGAGGACGTGGG +
Preference number: 6 (lower is better)
Translates to: RKFSICVRGGGK*VGQESIYGGRG
Trigger: CCCACGTCCTCCATATATGCTTTCCTGGCCCACCCATTTCCCTCCTCCCCTTACACAGATGGAGAACTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 72 bp ACCAGGAGCACACCCGGCCAGGACAGGAGACAGGATTaGAGAATTTCCCAAGGACCTGACATTCGTTCAGTA +
Preference number: 6 (lower is better)
Translates to: TRSTPGQDRRQD*RISQGPDIRSV
Trigger: TACTGAACGAATGTCAGGTCCTTGGGAAATTCTCCAATCCTGTCTCCTGTCCTGGCCGGGTGTGCTCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS GCA 72 bp GTCTCCCAAATAGTTCAAATTGACTTAGTCGAATGGTaGACCAGGAGCACACCCGGCCAGGACAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: VSQIVQIDLVEW*TRSTPGQDRRQ
Trigger: CTGTCTCCTGTCCTGGCCGGGTGTGCTCCTGGTGCACCATTCGACTAAGTCAATTTGAACTATTTGGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 72 bp AAGGTCTCCCAAATAGTTCAAATTGACTTAGTCGAATaGTGCACCAGGAGCACACCCGGCCAGGACAGGAGA +
Preference number: 6 (lower is better)
Translates to: KVSQIVQIDLVE*CTRSTPGQDRR
Trigger: TCTCCTGTCCTGGCCGGGTGTGCTCCTGGTGCACCATTCGACTAAGTCAATTTGAACTATTTGGGAGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 72 bp GTCGTGTCTGATACTGGGGGTGGCAGTGGGAACTGGTaGGAATTGAGCATGAGGGATCTTTTTGGCACAATG +
Preference number: 6 (lower is better)
Translates to: VVSDTGGGSGNW*ELSMRDLFGTM
Trigger: CATTGTGCCAAAAAGATCCCTCATGCTCAATTCCAACCAGTTCCCACTGCCACCCCCAGTATCAGACACGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 72 bp ATTGTCGTGTCTGATACTGGGGGTGGCAGTGGGAACTaGTTGGAATTGAGCATGAGGGATCTTTTTGGCACA +
Preference number: 6 (lower is better)
Translates to: IVVSDTGGGSGN*LELSMRDLFGT
Trigger: TGTGCCAAAAAGATCCCTCATGCTCAATTCCAACCAGTTCCCACTGCCACCCCCAGTATCAGACACGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 90 bp CAGCAGATTGTCGTGTCTGATACTGGGGGTGGCAGTGGGAACTGGTaGGAATTGAGCATGAGGGATCTTTTTGGCACAATGGAAATGTGT +
Preference number: 6 (lower is better)
Translates to: QQIVVSDTGGGSGNW*ELSMRDLFGTMEMC
Trigger: ACACATTTCCATTGTGCCAAAAAGATCCCTCATGCTCAATTCCAACCAGTTCCCACTGCCACCCCCAGTATCAGACACGACAATCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 72 bp AGCTTCAGCGAGATTGCCATCCTCTTTCAGTCCAGGTaGAAGGGAAAGGCTCAGCACATAAAAGCACTAGCA +
Preference number: 6 (lower is better)
Translates to: SFSEIAILFQSR*KGKAQHIKALA
Trigger: TGCTAGTGCTTTTATGTGCTGAGCCTTTCCCTTCAACCTGGACTGAAAGAGGATGGCAATCTCGCTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 72 bp TCTGATACTGGGGGTGGCAGTGGGAACTGGTTGGAATaGAGCATGAGGGATCTTTTTGGCACAATGGAAATG +
Preference number: 6 (lower is better)
Translates to: SDTGGGSGNWLE*SMRDLFGTMEM
Trigger: CATTTCCATTGTGCCAAAAAGATCCCTCATGCTCAATTCCAACCAGTTCCCACTGCCACCCCCAGTATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 72 bp AAACGTAGGTACAAAGGTCTCCCAAATAGTTCAAATTaGCTTAGTCGAATGGTGCACCAGGAGCACACCCGG +
Preference number: 6 (lower is better)
Translates to: KRRYKGLPNSSN*LSRMVHQEHTR
Trigger: CCGGGTGTGCTCCTGGTGCACCATTCGACTAAGTCAATTTGAACTATTTGGGAGACCTTTGTACCTACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 90 bp AAAAGAAACAGCTTCAGCGAGATTGCCATCCTCTTTCAGTCCAGGTaGAAGGGAAAGGCTCAGCACATAAAAGCACTAGCAATCTGTGCT +
Preference number: 6 (lower is better)
Translates to: KRNSFSEIAILFQSR*KGKAQHIKALAICA
Trigger: AGCACAGATTGCTAGTGCTTTTATGTGCTGAGCCTTTCCCTTCAACCTGGACTGAAAGAGGATGGCAATCTCGCTGAAGCTGTTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 72 bp GGACAGGAGACAGGATTGGAGAATTTCCCAAGGACCTaGCATTCGTTCAGTACTGATTCAAGTAGTGTTGGT +
Preference number: 6 (lower is better)
Translates to: GQETGLENFPRT*HSFSTDSSSVG
Trigger: ACCAACACTACTTGAATCAGTACTGAACGAATGTCAGGTCCTTGGGAAATTCTCCAATCCTGTCTCCTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS GCA 72 bp TGTAGAAAGATTCAACCCACCTCCTTACACACTGTGTaGATACTTCCACACTTGAACAAAGGTATTCCCTGT +
Preference number: 6 (lower is better)
Translates to: CRKIQPTSLHTV*ILPHLNKGIPC
Trigger: ACAGGGAATACCTTTGTTCAAGTGTGGAAGTATGCACACAGTGTGTAAGGAGGTGGGTTGAATCTTTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 72 bp CCACCTCCTTACACACTGTGTGCATACTTCCACACTTaGACAAAGGTATTCCCTGTAGGCAATAAGATAATA +
Preference number: 6 (lower is better)
Translates to: PPPYTLCAYFHT*TKVFPVGNKII
Trigger: TATTATCTTATTGCCTACAGGGAATACCTTTGTTCAAGTGTGGAAGTATGCACACAGTGTGTAAGGAGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 72 bp TGGGAACTGGTTGGAATTGAGCATGAGGGATCTTTTTaGCACAATGGAAATGTGTTAAAATTGCACTGTGGT +
Preference number: 6 (lower is better)
Translates to: WELVGIEHEGSF*HNGNVLKLHCG
Trigger: ACCACAGTGCAATTTTAACACATTTCCATTGTGCCAAAAAGATCCCTCATGCTCAATTCCAACCAGTTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 90 bp AGTGGTTCTCAAACTTCAGCATGCATTAGAGTTGCCCAGAAGGGCTaGTTGAAAGACATATTGCTAAACCGTACCAACAGACTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: SGSQTSACIRVAQKG*LKDILLNRTNRLFV
Trigger: AACAAAAAGTCTGTTGGTACGGTTTAGCAATATGTCTTTCAACAAGCCCTTCTGGGCAACTCTAATGCATGCTGAAGTTTGAGAACCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS TCA 72 bp ACAGAAAGACAAATACCACATGATCTCACTTGTATGTaGAACCTACAAGAGCTGAACTTATCGAAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: TERQIPHDLTCM*NLQELNLSKER
Trigger: CCTCTCCTTCGATAAGTTCAGCTCTTGTAGGTTTCACATACAAGTGAGATCATGTGGTATTTGTCTTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CCA 72 bp CATATATACATTGCTGGTGAGAATGTACAGCCACCTTaGAAAATGGTTTGGCAATTTCTTATGAAGTTAGAC +
Preference number: 6 (lower is better)
Translates to: HIYIAGENVQPP*KMVWQFLMKLD
Trigger: GTCTAACTTCATAAGAAATTGCCAAACCATTTTCCAAGGTGGCTGTACATTCTCACCAGCAATGTATATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 72 bp AAATATTTTCTCCCACTGTTTGTAGCTGTATCTACTTaGCCTATTAGCTCTAGTGATTTGAGAGCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: KYFLPLFVAVST*PISSSDLRAGK
Trigger: TTTCCCTGCTCTCAAATCACTAGAGCTAATAGGCAAAGTAGATACAGCTACAAACAGTGGGAGAAAATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625268.2
CDS CAA 72 bp GAGGGATCTTTTTGGCACAATGGAAATGTGTTAAAATaGCACTGTGGTCATGGCTTCACAACTTTATTAATT +
Preference number: 6 (lower is better)
Translates to: EGSFWHNGNVLK*HCGHGFTTLLI
Trigger: AATTAATAAAGTTGTGAAGCCATGACCACAGTGCAATTTTAACACATTTCCATTGTGCCAAAAAGATCCCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625268.2