Pregenerated sensors for LINC01201 (Homo sapiens)

Ensembl gene IDs: ENSG00000228659

Ensembl transcript IDs: ENST00000412420.1, ENST00000451431.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TGTGTGTTTCTGAGTCTACCACAGGTGCAGAAGTTTTACAGAAATTaGTTTCTCATTTCCAAATCCATCTTTTGTCATGGAGAGACTGCT	+
Preference number: 5 (lower is better) Translates to: CVFLSLPQVQKFYRN*FLISKSIFCHGETA Trigger: AGCAGTCTCTCCATGACAAAAGATGGATTTGGAAATGAGAAAGCAATTTCTGTAAAACTTCTGCACCTGTGGTAGACTCAGAAACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451431.1
CDS CAA 90 bp	TTTAGAGAGAGAGGGCTTGCTCAGGTTCAAGCCAAGGAAATCCAGTaGGGTCACTCAGCCATTAGTCCAAAAGGAAGGAACAGGGCAGGG	+
Preference number: 6 (lower is better) Translates to: FRERGLAQVQAKEIQ*GHSAISPKGRNRAG Trigger: CCCTGCCCTGTTCCTTCCTTTTGGACTAATGGCTGAGTGACCCAACTGGATTTCCTTGGCTTGAACCTGAGCAAGCCCTCTCTCTCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412420.1
CDS CAA 72 bp	AGAGGGCTTGCTCAGGTTCAAGCCAAGGAAATCCAGTaGGGTCACTCAGCCATTAGTCCAAAAGGAAGGAAC	+
Preference number: 6 (lower is better) Translates to: RGLAQVQAKEIQ*GHSAISPKGRN Trigger: GTTCCTTCCTTTTGGACTAATGGCTGAGTGACCCAACTGGATTTCCTTGGCTTGAACCTGAGCAAGCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412420.1
CDS TCA 72 bp	AGAAGTTTGATCATCAGGCTCACTAGGGATTGCATCTaGGTTGGCCAGGAACAGAAGAAACCACTCAGTGAA	+
Preference number: 6 (lower is better) Translates to: RSLIIRLTRDCI*VGQEQKKPLSE Trigger: TTCACTGAGTGGTTTCTTCTGTTCCTGGCCAACTCAGATGCAATCCCTAGTGAGCCTGATGATCAAACTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451431.1
CDS TCA 72 bp	AGACTGCTCTTTCAGGAATCTGATCGCTCAGAAGTTTaGTCATCAGGCTCACTAGGGATTGCATCTGAGTTG	+
Preference number: 6 (lower is better) Translates to: RLLFQESDRSEV*SSGSLGIASEL Trigger: CAACTCAGATGCAATCCCTAGTGAGCCTGATGATCAAACTTCTGAGCGATCAGATTCCTGAAAGAGCAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451431.1
CDS CAA 90 bp	GTGTGTGTTTCTGAGTCTACCACAGGTGCAGAAGTTTTACAGAAATaGCTTTCTCATTTCCAAATCCATCTTTTGTCATGGAGAGACTGC	+
Preference number: 6 (lower is better) Translates to: VCVSESTTGAEVLQK*LSHFQIHLLSWRDC Trigger: GCAGTCTCTCCATGACAAAAGATGGATTTGGAAATGAGAAAGCAATTTCTGTAAAACTTCTGCACCTGTGGTAGACTCAGAAACACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451431.1

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