Pregenerated sensors for LINC01193 (Homo sapiens)
Ensembl gene IDs: ENSG00000258710Ensembl transcript IDs: ENST00000553416.5, ENST00000554209.1, ENST00000554817.6, ENST00000557312.6, ENST00000567916.2, ENST00000653373.1, ENST00000653412.1, ENST00000653450.1, ENST00000653673.1, ENST00000654471.1, ENST00000654677.1, ENST00000655788.1, ENST00000657529.1, ENST00000658496.1, ENST00000659492.1, ENST00000659808.1, ENST00000660153.1, ENST00000660895.1, ENST00000661454.1, ENST00000661835.1, ENST00000662062.1, ENST00000663152.1, ENST00000663648.1, ENST00000664036.1, ENST00000665454.1, ENST00000665633.1, ENST00000665683.1, ENST00000666174.1, ENST00000666366.1, ENST00000668088.1, ENST00000668544.1, ENST00000669291.1, ENST00000670123.1, ENST00000670237.1, ENST00000670349.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCTCCTGCAAGCCAGCAGCCCTGCAGTGTAGCCTGCATCTCCCATaGATCCACCCGTCTCCTTCCAAGGGCTTTCCACCACACCATCCA | + |
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Preference number: 5 (lower is better) Translates to: LSCKPAALQCSLHLP*IHPSPSKGFPPHHP Trigger: TGGATGGTGTGGTGGAAAGCCCTTGGAAGGAGACGGGTGGATGCATGGGAGATGCAGGCTACACTGCAGGGCTGCTGGCTTGCAGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS GCA 90 bp | TGTCCTCGGTTCTCTCCTGCAAGCCAGCAGCCCTGCAGTGTAGCCTaGATCTCCCATGCATCCACCCGTCTCCTTCCAAGGGCTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CPRFSPASQQPCSVA*ISHASTRLLPRAFH Trigger: GTGGAAAGCCCTTGGAAGGAGACGGGTGGATGCATGGGAGATGCAGGCTACACTGCAGGGCTGCTGGCTTGCAGGAGAGAACCGAGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS GCA 90 bp | AGCTGCCACCAACCGCAGCAAGGCGAGCAGCAGCCCCAGGCTATCTaGAAGCTTCCAGCATGTAACTCCTCCTCCTCCTGGCATGGAACA | + |
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Preference number: 5 (lower is better) Translates to: SCHQPQQGEQQPQAI*KLPACNSSSSWHGT Trigger: TGTTCCATGCCAGGAGGAGGAGGAGTTACATGCTGGAAGCTTGCAGATAGCCTGGGGCTGCTGCTCGCCTTGCTGCGGTTGGTGGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000658496.1 ENST00000665633.1 ENST00000666174.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS TCA 90 bp | CTGTCTTCTTGGCTGCATCTGTCCGCAGTGGAGTTTACATCATGCTaGGCGCTCTGGTGCGAGGTAGTCTCGGTAGCTGCCACCAACCGC | + |
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Preference number: 5 (lower is better) Translates to: LSSWLHLSAVEFTSC*ALWCEVVSVAATNR Trigger: GCGGTTGGTGGCAGCTACCGAGACTACCTCGCACCAGAGCGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666174.1 ENST00000670237.1 |
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| CDS GCA 90 bp | CACAAGAGAACTTTCCCCAGCTCTCCCTTGTCCTCGGTTCTCTCCTaGAAGCCAGCAGCCCTGCAGTGTAGCCTGCATCTCCCATGCATC | + |
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Preference number: 5 (lower is better) Translates to: HKRTFPSSPLSSVLS*KPAALQCSLHLPCI Trigger: GATGCATGGGAGATGCAGGCTACACTGCAGGGCTGCTGGCTTGCAGGAGAGAACCGAGGACAAGGGAGAGCTGGGGAAAGTTCTCTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS CCA 90 bp | GTCAGAGGGCCAACGTACTGGGTCCTGGGGAAGAGTTTCCTCTGGTaGGAGTTGGTAGAAGGTGACCTGTCTTCTTGGCTGCATCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VRGPTYWVLGKSFLW*ELVEGDLSSWLHLS Trigger: GGACAGATGCAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCCAGGACCCAGTACGTTGGCCCTCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668088.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS CCA 90 bp | CAAAGGAACACATCTGTAAGCAGCACTGTCAACCCCAGGTGTCAGTaGTTTGGGCTGGGCTCTCTCTGTCTCTCTCCTGACCAGACCCAG | + |
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Preference number: 5 (lower is better) Translates to: QRNTSVSSTVNPRCQ*FGLGSLCLSPDQTQ Trigger: CTGGGTCTGGTCAGGAGAGAGACAGAGAGAGCCCAGCCCAAACCACTGACACCTGGGGTTGACAGTGCTGCTTACAGATGTGTTCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654677.1 ENST00000657529.1 ENST00000665683.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS TCA 90 bp | CTGGGTCCTGGGGAAGAGTTTCCTCTGGTGGGAGTTGGTAGAAGGTaGCCTGTCTTCTTGGCTGCATCTGTCCGCAGTGGAGTTTACATC | + |
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Preference number: 5 (lower is better) Translates to: LGPGEEFPLVGVGRR*PVFLAASVRSGVYI Trigger: GATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCCAGGACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668088.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS GCA 90 bp | GCTTCCCACCTTCTCAGCACTTCGGTTATTGTGGGGTGGAACCTCTaGCATAGGACAGAGCTAGAAACCAGAGACCCAGTGTTCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ASHLLSTSVIVGWNL*HRTELETRDPVFPV Trigger: CACTGGGAACACTGGGTCTCTGGTTTCTAGCTCTGTCCTATGGCAGAGGTTCCACCCCACAATAACCGAAGTGCTGAGAAGGTGGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668088.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS TCA 90 bp | ATGGGTCCTGGGGAAGAGTTTCCTCTGGTGGGAGTTGGTAGAAGGTaGCCTGTCTTCTTGGCTGCATCTGTCCGCAGTGGAGTTTACATC | + |
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Preference number: 5 (lower is better) Translates to: MGPGEEFPLVGVGRR*PVFLAASVRSGVYI Trigger: GATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCCAGGACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670123.1 |
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| CDS CCA 90 bp | TGTACTGCCATAAAGGGAGCACACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTGTACTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: CTAIKGAHCGTANWI*CSSSESQSRALYSL Trigger: TAGAGAGTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGCTCCCTTTATGGCAGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567916.2 |
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| CDS CCA 90 bp | ACTCCAAGCCCGCTTTTTACACACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTGTACTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: TPSPLFTHCGTANWI*CSSSESQSRALYSL Trigger: TAGAGAGTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGTAAAAAGCGGGCTTGGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659808.1 |
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| CDS CCA 90 bp | TGCTTCAAAATATCACAGGCCCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTGTACTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: CFKISQAHCGTANWI*CSSSESQSRALYSL Trigger: TAGAGAGTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGCCTGTGATATTTTGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653673.1 ENST00000660895.1 ENST00000661835.1 ENST00000663152.1 |
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| CDS CCA 90 bp | TCCACAGAGATACAAAATCCCCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTGTACTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: STEIQNPHCGTANWI*CSSSESQSRALYSL Trigger: TAGAGAGTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGGATTTTGTATCTCTGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664036.1 |
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| CDS CCA 90 bp | TTCCTTAGGTTCATATCATGGGTCCTGGGGAAGAGTTTCCTCTGGTaGGAGTTGGTAGAAGGTGACCTGTCTTCTTGGCTGCATCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: FLRFISWVLGKSFLW*ELVEGDLSSWLHLS Trigger: GGACAGATGCAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCCAGGACCCATGATATGAACCTAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670123.1 |
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| CDS CCA 90 bp | TTCACTCAGAACCAGCTTTTTCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTGTACTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: FTQNQLFHCGTANWI*CSSSESQSRALYSL Trigger: TAGAGAGTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGAAAAAGCTGGTTCTGAGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658496.1 |
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| CDS CAA 90 bp | GTAGCCAAGCACGGAGCAGCTGTCACTGCCAGCTGCCTCTCTCCATaGCCACCACACACCATTCAAGGCTCCAGGGCTCCAGGTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VAKHGAAVTASCLSP*PPHTIQGSRAPGSR Trigger: CCTGGAACCTGGAGCCCTGGAGCCTTGAATGGTGTGTGGTGGCAATGGAGAGAGGCAGCTGGCAGTGACAGCTGCTCCGTGCTTGGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000553416.5 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000660895.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS GCA 72 bp | CAACCGCAGCAAGGCGAGCAGCAGCCCCAGGCTATCTaGAAGCTTCCAGCATGTAACTCCTCCTCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QPQQGEQQPQAI*KLPACNSSSSW Trigger: CCAGGAGGAGGAGGAGTTACATGCTGGAAGCTTGCAGATAGCCTGGGGCTGCTGCTCGCCTTGCTGCGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000658496.1 ENST00000665633.1 ENST00000666174.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS TCA 72 bp | CCAGTGGCACTGGACCCGGGACAGAGCCTCCATCCATaGGTGGGGCTCCATGGAAGAAGTGAATCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVALDPGQSLHP*VGLHGRSESLA Trigger: AGCCAGAGATTCACTTCTTCCATGGAGCCCCACTCATGGATGGAGGCTCTGTCCCGGGTCCAGTGCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668088.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS GCA 72 bp | AGGTTCCAGGCTCCAGCCTGCGGCAGCACAATCTGCTaGCGCTTTCTCCAAACTCTGCGGCAGAAGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: RFQAPACGSTIC*RFLQTLRQKYR Trigger: CCTGTACTTCTGCCGCAGAGTTTGGAGAAAGCGGCAGCAGATTGTGCTGCCGCAGGCTGGAGCCTGGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000553416.5 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000660895.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS GCA 72 bp | CCTGTAGCCAAGCACGGAGCAGCTGTCACTGCCAGCTaGCTCTCTCCATTGCCACCACACACCATTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PVAKHGAAVTAS*LSPLPPHTIQG Trigger: GCCTTGAATGGTGTGTGGTGGCAATGGAGAGAGGCAGCTGGCAGTGACAGCTGCTCCGTGCTTGGCTACAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000553416.5 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000660895.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS GCA 72 bp | AAGCCAGCAGCCCTGCAGTGTAGCCTGCATCTCCCATaGATCCACCCGTCTCCTTCCAAGGGCTTTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: KPAALQCSLHLP*IHPSPSKGFPP Trigger: TGGTGGAAAGCCCTTGGAAGGAGACGGGTGGATGCATGGGAGATGCAGGCTACACTGCAGGGCTGCTGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS GCA 72 bp | TTCTCTCCTGCAAGCCAGCAGCCCTGCAGTGTAGCCTaGATCTCCCATGCATCCACCCGTCTCCTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FSPASQQPCSVA*ISHASTRLLPR Trigger: CCTTGGAAGGAGACGGGTGGATGCATGGGAGATGCAGGCTACACTGCAGGGCTGCTGGCTTGCAGGAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS GCA 72 bp | AAGCCTACCCCATTGCCTTTCTACACTCTGGCCAGCTaGAGTATCCGTCGCTGCCACCAACCACAGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: KPTPLPFYTLAS*SIRRCHQPQRG Trigger: GCCTCGCTGTGGTTGGTGGCAGCGACGGATACTGCAGCTGGCCAGAGTGTAGAAAGGCAATGGGGTAGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658496.1 ENST00000665633.1 ENST00000666174.1 |
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| CDS CCA 72 bp | GCAGCACTGTCAACCCCAGGTGTCAGTGGTTTGGGCTaGGCTCTCTCTGTCTCTCTCCTGACCAGACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AALSTPGVSGLG*ALSVSLLTRPR Trigger: TCTGGGTCTGGTCAGGAGAGAGACAGAGAGAGCCCAGCCCAAACCACTGACACCTGGGGTTGACAGTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654677.1 ENST00000657529.1 ENST00000665683.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS CAA 90 bp | GGGCCAACGTACTGGGTCCTGGGGAAGAGTTTCCTCTGGTGGGAGTaGGTAGAAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GPTYWVLGKSFLWWE*VEGDLSSWLHLSAV Trigger: CACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCCAGGACCCAGTACGTTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668088.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS TCA 72 bp | CTTCAGGAGCGGTGCCTCTGCCTGCAGCCTTGGAGCTaGCTCTGCCACCCAAATAAGCTGAGCCAGATGCAT | + |
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Preference number: 6 (lower is better) Translates to: LQERCLCLQPWS*LCHPNKLSQMH Trigger: ATGCATCTGGCTCAGCTTATTTGGGTGGCAGAGTCAGCTCCAAGGCTGCAGGCAGAGGCACCGCTCCTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670123.1 |
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| CDS GCA 72 bp | TTTCCTTCCTGTAGCCAAGCACGGAGCAGCTGTCACTaGCAGCTGCCTCTCTCCATTGCCACCACACACCAT | + |
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Preference number: 6 (lower is better) Translates to: FPSCSQARSSCH*QLPLSIATTHH Trigger: ATGGTGTGTGGTGGCAATGGAGAGAGGCAGCTGGCAGTGACAGCTGCTCCGTGCTTGGCTACAGGAAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000553416.5 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000660895.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000668544.1 ENST00000670237.1 |
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| CDS GCA 72 bp | TCACAGGCCCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: SQAHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGCCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653673.1 ENST00000660895.1 ENST00000661835.1 ENST00000663152.1 |
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| CDS GCA 72 bp | CCCGTTGACCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: PVDHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGTCAACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653412.1 |
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| CDS TCA 72 bp | GGGGAAGAGTTTCCTCTGGTGGGAGTTGGTAGAAGGTaGCCTGTCTTCTTGGCTGCATCTGTCCGCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GEEFPLVGVGRR*PVFLAASVRSG Trigger: TCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668088.1 ENST00000668544.1 ENST00000670123.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS TCA 72 bp | CGCAGTGGAGTTTACATCATGCTGAGCATAGGCCTGTaGTGGTGGTGGCCACAGGGTCATTCTCCTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSGVYIMLSIGL*WWWPQGHSPLP Trigger: AGGCAGAGGAGAATGACCCTGTGGCCACCACCATCACAGGCCTATGCTCAGCATGATGTAAACTCCACTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665683.1 |
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| CDS GCA 72 bp | TGGAGAAGGCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: WRRHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGCCTTCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000557312.6 ENST00000653373.1 ENST00000653450.1 ENST00000654471.1 ENST00000660153.1 ENST00000663648.1 ENST00000665454.1 ENST00000669291.1 ENST00000670123.1 |
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| CDS GCA 72 bp | AAGGGAGCACACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: KGAHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGCTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567916.2 |
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| CDS GCA 72 bp | CATGCTGAGCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: HAEHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGCTCAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000654677.1 ENST00000657529.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665633.1 ENST00000668088.1 ENST00000668544.1 ENST00000670349.1 |
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| CDS CCA 72 bp | CTTTGGAGAAGGCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LWRRHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGCCTTCTCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000557312.6 ENST00000653373.1 ENST00000653450.1 ENST00000654471.1 ENST00000660153.1 ENST00000663648.1 ENST00000665454.1 ENST00000669291.1 ENST00000670123.1 |
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| CDS CCA 72 bp | CATCATGCTGAGCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HHAEHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGCTCAGCATGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000654677.1 ENST00000657529.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665633.1 ENST00000668088.1 ENST00000668544.1 ENST00000670349.1 |
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| CDS CCA 72 bp | CCAACGTACTGGGTCCTGGGGAAGAGTTTCCTCTGGTaGGAGTTGGTAGAAGGTGACCTGTCTTCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PTYWVLGKSFLW*ELVEGDLSSWL Trigger: CAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCCAGGACCCAGTACGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668088.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS CCA 72 bp | ATATCACAGGCCCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ISQAHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGCCTGTGATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653673.1 ENST00000660895.1 ENST00000661835.1 ENST00000663152.1 |
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| CDS CCA 72 bp | TTTCCCGTTGACCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FPVDHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGTCAACGGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653412.1 |
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| CDS CCA 72 bp | AAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTaGAGTTTACATCATGCTGAGCGCTCTGGTGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: KVTCLLGCICPQ*SLHHAERSGAR Trigger: CCTCGCACCAGAGCGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666174.1 ENST00000670237.1 |
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| CDS TCA 72 bp | ATTTTGGAGTTGAGTTTGAGGTGCCCCATAGGCCTGTaGTGGTGGTGGCCACAGGGTCATTCTCCTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ILELSLRCPIGL*WWWPQGHSPLP Trigger: AGGCAGAGGAGAATGACCCTGTGGCCACCACCATCACAGGCCTATGGGGCACCTCAAACTCAACTCCAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553416.5 |
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| CDS TCA 72 bp | TGGCTGCATCTGTCCGCAGTGGAGTTTACATCATGCTaGGCACTGTGGCACAGCAAACTGGATCTGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: WLHLSAVEFTSC*ALWHSKLDLVL Trigger: GAGCACCAGATCCAGTTTGCTGTGCCACAGTGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000654677.1 ENST00000657529.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665633.1 ENST00000668088.1 ENST00000668544.1 ENST00000670349.1 |
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| CDS GCA 72 bp | GTGACTTACCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: VTYHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGTAAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553416.5 ENST00000554817.6 |
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| CDS GCA 72 bp | CAAAATCCCCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QNPHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGGATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664036.1 |
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| CDS CCA 72 bp | ATAAAGGGAGCACACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IKGAHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGCTCCCTTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567916.2 |
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| CDS CCA 72 bp | ACTGCCATAAAGGGAGCACACTGTGGCACAGCAAACTaGATCTGGTGCTCATCCTCTGAGTCACAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TAIKGAHCGTAN*IWCSSSESQSR Trigger: CCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGCTCCCTTTATGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567916.2 |
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| CDS CCA 72 bp | CCGCTTTTTACACACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PLFTHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGTAAAAAGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659808.1 |
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| CDS CCA 72 bp | CCAAGCCCGCTTTTTACACACTGTGGCACAGCAAACTaGATCTGGTGCTCATCCTCTGAGTCACAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSPLFTHCGTAN*IWCSSSESQSR Trigger: CCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGTAAAAAGCGGGCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659808.1 |
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| CDS CCA 72 bp | AAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTaGAGTTTACATCATGCTGAGCCACACTTCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KVTCLLGCICPQ*SLHHAEPHFPS Trigger: GGAGGGGAAGTGTGGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658496.1 |
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| CDS CAA 72 bp | TATTTCAACCACAAGAGAACTTTCCCCAGCTCTCCCTaGTCCTCGGTTCTCTCCTGCAAGCCAGCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: YFNHKRTFPSSP*SSVLSCKPAAL Trigger: CAGGGCTGCTGGCTTGCAGGAGAGAACCGAGGACAAGGGAGAGCTGGGGAAAGTTCTCTTGTGGTTGAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS CAA 90 bp | AGGTTCATATCATGGGTCCTGGGGAAGAGTTTCCTCTGGTGGGAGTaGGTAGAAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: RFISWVLGKSFLWWE*VEGDLSSWLHLSAV Trigger: CACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTTCTACCAACTCCCACCAGAGGAAACTCTTCCCCAGGACCCATGATATGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670123.1 |
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| CDS GCA 72 bp | TATTCTACCCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: YSTHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGTAGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655788.1 |
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| CDS GCA 72 bp | CAGCTTTTTCACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: QLFHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGAAAAAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658496.1 |
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| CDS CCA 72 bp | AAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTaGAGTTTACATCATGCTGAGCACTGTGGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: KVTCLLGCICPQ*SLHHAEHCGTA Trigger: TGCTGTGCCACAGTGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000654677.1 ENST00000657529.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665633.1 ENST00000668088.1 ENST00000668544.1 ENST00000670349.1 |
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| CDS CCA 72 bp | CAATATTCTACCCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QYSTHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGTAGAATATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655788.1 |
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| CDS CCA 72 bp | AACCAGCTTTTTCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: NQLFHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGAAAAAGCTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658496.1 |
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| CDS CCA 72 bp | ATACAAAATCCCCACTGTGGCACAGCAAACTGGATCTaGTGCTCATCCTCTGAGTCACAGTCCAGGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IQNPHCGTANWI*CSSSESQSRAL Trigger: CAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGGATTTTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664036.1 |
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| CDS GCA 72 bp | CTTTTTACACACTGTGGCACAGCAAACTGGATCTGGTaGTCATCCTCTGAGTCACAGTCCAGGGCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LFTHCGTANWIW*SSSESQSRALY Trigger: GTACAGAGCCCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGTGTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659808.1 |
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| CDS CCA 72 bp | AGTTTACATCATGCTGAGCACTGTGGCACAGCAAACTaGATCTGGTGCTCATCCTCTGAGTCACAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLHHAEHCGTAN*IWCSSSESQSR Trigger: CCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGCTCAGCATGATGTAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000654677.1 ENST00000657529.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665633.1 ENST00000668088.1 ENST00000668544.1 ENST00000670349.1 |
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| CDS CCA 72 bp | AAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTaGAGTTTACATCATGCTGAGCTCCTGCTGCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: KVTCLLGCICPQ*SLHHAELLLLF Trigger: AAACAGCAGCAGGAGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653373.1 ENST00000665454.1 ENST00000670123.1 |
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| CDS CCA 72 bp | CAAGAGCAATATTCTACCCACTGTGGCACAGCAAACTaGATCTGGTGCTCATCCTCTGAGTCACAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QEQYSTHCGTAN*IWCSSSESQSR Trigger: CCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGTAGAATATTGCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655788.1 |
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| CDS CCA 72 bp | AAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTaGAGTTTACATCATGCTGAGCATAGGCCTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: KVTCLLGCICPQ*SLHHAEHRPVM Trigger: CATCACAGGCCTATGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665683.1 |
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| CDS CCA 72 bp | ACTCAGAACCAGCTTTTTCACTGTGGCACAGCAAACTaGATCTGGTGCTCATCCTCTGAGTCACAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TQNQLFHCGTAN*IWCSSSESQSR Trigger: CCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGAAAAAGCTGGTTCTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658496.1 |
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| CDS CCA 72 bp | ACAGAGATACAAAATCCCCACTGTGGCACAGCAAACTaGATCTGGTGCTCATCCTCTGAGTCACAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TEIQNPHCGTAN*IWCSSSESQSR Trigger: CCTGGACTGTGACTCAGAGGATGAGCACCAGATCCAGTTTGCTGTGCCACAGTGGGGATTTTGTATCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664036.1 |
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| CDS CAA 90 bp | CACCCGTCTCCTTCCAAGGGCTTTCCACCACACCATCCACTGTTTTaGAGAGCACTGGCAGGCTTTCAATTTGTCCACAATCTGCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: HPSPSKGFPPHHPLF*RALAGFQFVHNLLL Trigger: TAACAGCAGATTGTGGACAAATTGAAAGCCTGCCAGTGCTCTCAAAAACAGTGGATGGTGTGGTGGAAAGCCCTTGGAAGGAGACGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS CCA 72 bp | AAGGTGACCTGTCTTCTTGGCTGCATCTGTCCGCAGTaGAGTTTACATCATGCTGAGCAAATGAATCACCTG | + |
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Preference number: 6 (lower is better) Translates to: KVTCLLGCICPQ*SLHHAEQMNHL Trigger: CAGGTGATTCATTTGCTCAGCATGATGTAAACTCCACTGCGGACAGATGCAGCCAAGAAGACAGGTCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666366.1 |
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| CDS CAA 72 bp | CCTTCCAAGGGCTTTCCACCACACCATCCACTGTTTTaGAGAGCACTGGCAGGCTTTCAATTTGTCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: PSKGFPPHHPLF*RALAGFQFVHN Trigger: ATTGTGGACAAATTGAAAGCCTGCCAGTGCTCTCAAAAACAGTGGATGGTGTGGTGGAAAGCCCTTGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000653373.1 ENST00000654677.1 ENST00000657529.1 ENST00000658496.1 ENST00000659492.1 ENST00000661454.1 ENST00000662062.1 ENST00000665454.1 ENST00000665633.1 ENST00000665683.1 ENST00000666174.1 ENST00000666366.1 ENST00000668544.1 ENST00000670237.1 ENST00000670349.1 |
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| CDS CCA 72 bp | AAAATATCACAGGCCCTGGTAAAATTCCTTCCAAAGTaGTTCAAGAGCAATATTCTACCCACTGTGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: KISQALVKFLPK*FKSNILPTVAQ Trigger: CTGTGCCACAGTGGGTAGAATATTGCTCTTGAACCACTTTGGAAGGAATTTTACCAGGGCCTGTGATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655788.1 |
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| CDS CAA 90 bp | AATGCAAGAAGGGAATGTGGTTTGGGAAAGTTCATTAGATCAATTTaGGAGTTGAGTTTGAGGTGCCCCCAGCAATTGATGAGTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: NARRECGLGKFIRSI*ELSLRCPQQLMSSR Trigger: CCTTGAACTCATCAATTGCTGGGGGCACCTCAAACTCAACTCCAAAATTGATCTAATGAACTTTCCCAAACCACATTCCCTTCTTGCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000554209.1 ENST00000557312.6 ENST00000653673.1 ENST00000661454.1 ENST00000665454.1 |
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| CDS CAA 72 bp | TGTGGTTTGGGAAAGTTCATTAGATCAATTTTGGAGTaGAGTTTGAGGTGCCCCCAGCAATTGATGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: CGLGKFIRSILE*SLRCPQQLMSS Trigger: TGAACTCATCAATTGCTGGGGGCACCTCAAACTCAACTCCAAAATTGATCTAATGAACTTTCCCAAACCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000554209.1 ENST00000557312.6 ENST00000653673.1 ENST00000661454.1 ENST00000665454.1 |
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| CDS CAA 72 bp | ATGACTACTTCTTCTACTACCGATTCTGTATTCCCTTaGCCTTCAGCAAGCATCACAGCAGGTAGAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: MTTSSTTDSVFP*PSASITAGRVF Trigger: AAAAACTCTACCTGCTGTGATGCTTGCTGAAGGCAAAGGGAATACAGAATCGGTAGTAGAAGAAGTAGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653412.1 |
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| CDS GCA 72 bp | TTCTTGGTCCTCAAGGAAGGGTTTATTGTTTTTGTTTaGTTGTTTGATTGGTTGTTTGCCATTGCATTAAAA | + |
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Preference number: 6 (lower is better) Translates to: FLVLKEGFIVFV*LFDWLFAIALK Trigger: TTTTAATGCAATGGCAAACAACCAATCAAACAAGCAAACAAAAACAATAAACCCTTCCTTGAGGACCAAGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000554817.6 ENST00000567916.2 ENST00000653373.1 ENST00000654471.1 ENST00000660153.1 ENST00000661835.1 ENST00000662062.1 ENST00000663152.1 ENST00000666366.1 ENST00000668088.1 |
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