Pregenerated sensors for LINC01192 (Homo sapiens)
Ensembl gene IDs: ENSG00000241369Ensembl transcript IDs: ENST00000462928.5, ENST00000470546.5, ENST00000474168.6, ENST00000488173.6, ENST00000488287.2, ENST00000489012.5, ENST00000492553.6, ENST00000493473.2, ENST00000494897.5, ENST00000653088.1, ENST00000654609.1, ENST00000654755.1, ENST00000655228.1, ENST00000655584.1, ENST00000655719.1, ENST00000655806.1, ENST00000655980.1, ENST00000656281.1, ENST00000656322.1, ENST00000657261.1, ENST00000657422.1, ENST00000658030.1, ENST00000658280.1, ENST00000659031.1, ENST00000659266.1, ENST00000659789.1, ENST00000659796.1, ENST00000660784.1, ENST00000660789.1, ENST00000661439.1, ENST00000661702.1, ENST00000662016.1, ENST00000662054.1, ENST00000662097.1, ENST00000662504.1, ENST00000663627.1, ENST00000663767.1, ENST00000664163.1, ENST00000664365.1, ENST00000664909.1, ENST00000665626.1, ENST00000665928.1, ENST00000666234.1, ENST00000666364.1, ENST00000666445.1, ENST00000667319.1, ENST00000667576.1, ENST00000668405.1, ENST00000668425.1, ENST00000670024.1, ENST00000670179.1, ENST00000670655.1, ENST00000671181.1
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | ACCGCCGATGCCACCTCTTTCCCACTCCCAGCAACAGCAGCATGTTaGAGGGATCATCTCTGGTTGCTAGGCGAAGTAGAACACAGCAAT | + |
Preference number: 5 (lower is better) Translates to: TADATSFPLPATAAC*RDHLWLLGEVEHSN Trigger: ATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAAAGAGGTGGCATCGGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000654755.1 ENST00000655719.1 ENST00000655806.1 ENST00000658280.1 ENST00000659789.1 ENST00000659796.1 ENST00000662016.1 ENST00000662054.1 ENST00000664163.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CCA 90 bp | AGGCCACACAATCATGGTGGAAGGCAAAAGCCATGTCTCACAGGGTaGCAGACAAGAGAAGAGGGCTTGTGCAGGGAAACTCCCACTGTC | + |
Preference number: 5 (lower is better) Translates to: RPHNHGGRQKPCLTG*QTREEGLCRETPTV Trigger: GACAGTGGGAGTTTCCCTGCACAAGCCCTCTTCTCTTGTCTGCCACCCTGTGAGACATGGCTTTTGCCTTCCACCATGATTGTGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655228.1 ENST00000670655.1 |
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CDS TCA 90 bp | ACCCAGGTATTCCCAGGTACTACATCAAGGGCCTTGGTGAGCCTCTaGGACTTTCTGACTTCAGGTTACCAGCTGTGGTGGTTATGGGGC | + |
Preference number: 5 (lower is better) Translates to: TQVFPGTTSRALVSL*DFLTSGYQLWWLWG Trigger: GCCCCATAACCACCACAGCTGGTAACCTGAAGTCAGAAAGTCTCAGAGGCTCACCAAGGCCCTTGATGTAGTACCTGGGAATACCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659796.1 ENST00000662016.1 |
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CDS CCA 90 bp | CTCCCTCAAGCACACAGATTCTCTCTCTGCACCTCTGCTGGGGCATaGGAAGTGGTGGTGAAGGCAATTCAAGCTTGTCTTGTCTATCCC | + |
Preference number: 5 (lower is better) Translates to: LPQAHRFSLCTSAGA*EVVVKAIQACLVYP Trigger: GGGATAGACAAGACAAGCTTGAATTGCCTTCACCACCACTTCCCATGCCCCAGCAGAGGTGCAGAGAGAGAATCTGTGTGCTTGAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS TCA 90 bp | GGTGGTGATCTCAGGAGCACACTTTGTTCTCCAACTCACTGTGGCTaGGCTGGTTCTCAAGCTGCAAGACAAAGTCCCCTTACTCTTCCC | + |
Preference number: 5 (lower is better) Translates to: GGDLRSTLCSPTHCG*AGSQAARQSPLTLP Trigger: GGGAAGAGTAAGGGGACTTTGTCTTGCAGCTTGAGAACCAGCTCAGCCACAGTGAGTTGGAGAACAAAGTGTGCTCCTGAGATCACCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS GCA 90 bp | CACTCTTTTCTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATTaGCACTACTGCCTCAGACCCACAGCAAGTACTGCCTGGCTACCA | + |
Preference number: 5 (lower is better) Translates to: HSFLSFTQAGGVSPH*HYCLRPTASTAWLP Trigger: TGGTAGCCAGGCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAGAAAAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 90 bp | GGCTACTATTGGTATTCAAGGCTCAAGGGTTATTTAGGCAGCAGGTaGTGTATCCTGCCAGACCTGGGTCCTTCTCTTCAAGGCAGCAAG | + |
Preference number: 5 (lower is better) Translates to: GYYWYSRLKGYLGSR*CILPDLGPSLQGSK Trigger: CTTGCTGCCTTGAAGAGAAGGACCCAGGTCTGGCAGGATACATCACCTGCTGCCTAAATAACCCTTGAGCCTTGAATACCAATAGTAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 90 bp | AGATGGCTAATTCAGCCAAGCCTTATGTCCTCCCTTTCAGTACAGTaGGCTTCTACTTGGGCCAGGGTATGTCCAGAAATGGCATCCAGG | + |
Preference number: 5 (lower is better) Translates to: RWLIQPSLMSSLSVQ*ASTWARVCPEMASR Trigger: CCTGGATGCCATTTCTGGACATACCCTGGCCCAAGTAGAAGCTCACTGTACTGAAAGGGAGGACATAAGGCTTGGCTGAATTAGCCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 90 bp | CAGGGATCATCTCTGGTTGCTAGGCGAAGTAGAACACAGCAATTGTaGGGCTCTGAATTCAATGCTGTCCTGCTATGTGAGGAGACCCAG | + |
Preference number: 5 (lower is better) Translates to: QGSSLVARRSRTQQL*GSEFNAVLLCEETQ Trigger: CTGGGTCTCCTCACATAGCAGGACAGCATTGAATTCAGAGCCTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659796.1 ENST00000662016.1 |
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CDS TCA 90 bp | TATAAGGTGGGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTATTGGCCACTGGA | + |
Preference number: 5 (lower is better) Translates to: YKVGGSLECGKQKLL*AKITPLHSILLATG Trigger: TCCAGTGGCCAATAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCCCACCTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000462928.5 ENST00000654609.1 ENST00000660789.1 ENST00000662016.1 ENST00000663627.1 ENST00000666445.1 |
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CDS CCA 90 bp | AAGTTAGAGCCAAAGCCAACACAGCACTGGGTCTCACCCAAGACATaGCAACCACTTTCTGGCTACTGCTTATGTTCACTCAAGGCTCAA | + |
Preference number: 5 (lower is better) Translates to: KLEPKPTQHWVSPKT*QPLSGYCLCSLKAQ Trigger: TTGAGCCTTGAGTGAACATAAGCAGTAGCCAGAAAGTGGTTGCCATGTCTTGGGTGAGACCCAGTGCTGTGTTGGCTTTGGCTCTAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 90 bp | TACCAGACAGAGACTCTTCTCTTCCCTTACTTTTCCCCAAACAAATaGAGATTCTCTGTCCCTGCTGAACTGCCTGGAACTGTGGGAGAG | + |
Preference number: 5 (lower is better) Translates to: YQTETLLFPYFSPNK*RFSVPAELPGTVGE Trigger: CTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTCATTTGTTTGGGGAAAAGTAAGGGAAGAGAAGAGTCTCTGTCTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS GCA 90 bp | GAAGTAGAACACAGCAATTGTGAGGCTCTGAATTCAATGCTGTCCTaGTATGTGAGGAGACCCAGGTATTCCCAGGTACTACATCAAGGG | + |
Preference number: 5 (lower is better) Translates to: EVEHSNCEALNSMLS*YVRRPRYSQVLHQG Trigger: CCCTTGATGTAGTACCTGGGAATACCTGGGTCTCCTCACATAGCAGGACAGCATTGAATTCAGAGCCTCACAATTGCTGTGTTCTACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659796.1 ENST00000662016.1 |
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CDS TCA 90 bp | GAAGATTCTCTGTCCCTGCTGAACTGCCTGGAACTGTGGGAGAGTTaGTATAAGCAATCCTATGGTCATAACCACTGCGACTGCAATAAG | + |
Preference number: 5 (lower is better) Translates to: EDSLSLLNCLELWES*YKQSYGHNHCDCNK Trigger: CTTATTGCAGTCGCAGTGGTTATGACCATAGGATTGCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 90 bp | CAGGGAAACTCCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: QGNSHCLQKPLAKQR*LGEIENPPRAEAAF Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGGAGTTTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655228.1 ENST00000670655.1 |
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CDS CCA 90 bp | GGCAGAAAGCATCTCTCCTTGTGTCCACCACAGTTTGTAATATTCTaGATAACACCTAAAGCCAGCATCACACTGGATTGGATCCAAGGG | + |
Preference number: 5 (lower is better) Translates to: GRKHLSLCPPQFVIF*ITPKASITLDWIQG Trigger: CCCTTGGATCCAATCCAGTGTGATGCTGGCTTTAGGTGTTATCCAGAATATTACAAACTGTGGTGGACACAAGGAGAGATGCTTTCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 90 bp | GAGCCTTTAGTATTCTCTTGGTGCTCTATTCTATTGCAGCTGAGCTaGTGCCCGAGCCACAAGACAAAGTCATCCTCACTCTTTTCTATC | + |
Preference number: 5 (lower is better) Translates to: EPLVFSWCSILLQLS*CPSHKTKSSSLFSI Trigger: GATAGAAAAGAGTGAGGATGACTTTGTCTTGTGGCTCGGGCACCAGCTCAGCTGCAATAGAATAGAGCACCAAGAGAATACTAAAGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 90 bp | CCAAGATCACGCCACTACACTCCATTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTAGATCTCTTT | + |
Preference number: 5 (lower is better) Translates to: PRSRHYTPFYWPLES*KGEESCASECVDLF Trigger: AAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAATGGAGTGTAGTGGCGTGATCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000462928.5 ENST00000654609.1 ENST00000660789.1 ENST00000662016.1 ENST00000663627.1 ENST00000666445.1 |
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CDS CCA 90 bp | TTGCCACATACCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: LPHTHCLQKPLAKQR*LGEIENPPRAEAAF Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGGTATGTGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000462928.5 ENST00000474168.6 ENST00000492553.6 ENST00000494897.5 ENST00000655584.1 ENST00000655806.1 ENST00000658030.1 ENST00000659789.1 ENST00000660784.1 ENST00000662016.1 ENST00000662054.1 ENST00000664163.1 |
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CDS TCA 90 bp | CTATTGGCCACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCACCACACCTG | + |
Preference number: 5 (lower is better) Translates to: LLATGIMEGGRIMCF*MCRSLSSNGIAPHL Trigger: CAGGTGTGGTGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000462928.5 ENST00000489012.5 ENST00000655980.1 ENST00000668425.1 |
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CDS TCA 90 bp | CTATTGGCCACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCACCACACCTC | + |
Preference number: 5 (lower is better) Translates to: LLATGIMEGGRIMCF*MCRSLSSNGIAPHL Trigger: GAGGTGTGGTGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 25 transcripts: ENST00000474168.6 ENST00000488173.6 ENST00000488287.2 ENST00000493473.2 ENST00000494897.5 ENST00000654609.1 ENST00000654755.1 ENST00000655228.1 ENST00000655719.1 ENST00000658280.1 ENST00000659789.1 ENST00000659796.1 ENST00000660784.1 ENST00000660789.1 ENST00000661439.1 ENST00000663627.1 ENST00000664163.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000670024.1 ENST00000670179.1 ENST00000670655.1 |
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CDS TCA 90 bp | GGAATTGCACCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTAT | + |
Preference number: 5 (lower is better) Translates to: GIAPHSWLPCSRWIC*IPLLAIQLVNASVY Trigger: ATAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGGTGCAATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000492553.6 ENST00000653088.1 ENST00000655584.1 ENST00000655806.1 ENST00000656281.1 ENST00000656322.1 ENST00000657261.1 ENST00000658030.1 ENST00000659031.1 ENST00000662016.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000666364.1 ENST00000666445.1 ENST00000667319.1 ENST00000667576.1 |
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CDS TCA 90 bp | CTATTGGCCACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCACCACACTCC | + |
Preference number: 5 (lower is better) Translates to: LLATGIMEGGRIMCF*MCRSLSSNGIAPHS Trigger: GGAGTGTGGTGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 17 transcripts: ENST00000492553.6 ENST00000653088.1 ENST00000655584.1 ENST00000655806.1 ENST00000656281.1 ENST00000656322.1 ENST00000657261.1 ENST00000658030.1 ENST00000659031.1 ENST00000662016.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000666364.1 ENST00000666445.1 ENST00000667319.1 ENST00000667576.1 |
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CDS TCA 90 bp | CTTCCCTTACTTTTCCCCAAACAAATGAAGATTCTCTGTCCCTGCTaGACTGCCTGGAACTGTGGGAGAGTTGATATAAGCAATCCTATG | + |
Preference number: 5 (lower is better) Translates to: LPLLFPKQMKILCPC*TAWNCGRVDISNPM Trigger: CATAGGATTGCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTCATTTGTTTGGGGAAAAGTAAGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 90 bp | ATGCCGTCTACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTAT | + |
Preference number: 5 (lower is better) Translates to: MPSTYSWLPCSRWIC*IPLLAIQLVNASVY Trigger: ATAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTAGACGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671181.1 |
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CDS GCA 90 bp | CTTTCAGAGGTTCTTTATACATCTTCTTCCTTCATCATCTTCATCTaGAAGGCCAAGGCTGGTCCATTAGCACCCCTTCTCATACTAGTG | + |
Preference number: 5 (lower is better) Translates to: LSEVLYTSSSFIIFI*KAKAGPLAPLLILV Trigger: CACTAGTATGAGAAGGGGTGCTAATGGACCAGCCTTGGCCTTGCAGATGAAGATGATGAAGGAAGAAGATGTATAAAGAACCTCTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000470546.5 ENST00000488287.2 ENST00000654609.1 ENST00000655980.1 ENST00000657261.1 ENST00000658280.1 ENST00000659031.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663767.1 ENST00000666234.1 ENST00000666364.1 ENST00000666445.1 ENST00000668405.1 ENST00000668425.1 ENST00000670024.1 |
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CDS CCA 90 bp | TCAACAGCATTCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: STAFHCLQKPLAKQR*LGEIENPPRAEAAF Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGAATGCTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000470546.5 ENST00000654609.1 ENST00000655980.1 ENST00000658280.1 ENST00000661439.1 ENST00000661702.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000666234.1 ENST00000666445.1 ENST00000667319.1 ENST00000670024.1 |
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CDS TCA 90 bp | TATAAGGTGGGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTTTTGACAATATTT | + |
Preference number: 5 (lower is better) Translates to: YKVGGSLECGKQKLL*AKITPLHSILLTIF Trigger: AAATATTGTCAAAAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCCCACCTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489012.5 |
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CDS CCA 90 bp | TGTGATCATGGGTCAGGCAAAAGTTTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTAGATCTCTTT | + |
Preference number: 5 (lower is better) Translates to: CDHGSGKSFYWPLES*KGEESCASECVDLF Trigger: AAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAAACTTTTGCCTGACCCATGATCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489012.5 ENST00000658030.1 |
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CDS CCA 90 bp | ATCTTCATTATCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: IFIIHCLQKPLAKQR*LGEIENPPRAEAAF Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGATAATGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000657422.1 ENST00000659266.1 ENST00000660789.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 |
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CDS GCA 90 bp | CATAACTTATACCAGGGAAAGGTCATAATGAAGGTGTCTCAGCATTaGCGTATGGTTAAATTGACCCCATTGTCATTCCATGCTCATAAG | + |
Preference number: 5 (lower is better) Translates to: HNLYQGKVIMKVSQH*RMVKLTPLSFHAHK Trigger: CTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACACCTTCATTATGACCTTTCCCTGGTATAAGTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000654609.1 ENST00000655228.1 ENST00000657422.1 ENST00000658280.1 ENST00000659266.1 ENST00000660789.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000668425.1 ENST00000670655.1 |
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CDS CCA 90 bp | CACAATTACCTTAATGTCATTCTGTCCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTAGATCTCTTT | + |
Preference number: 5 (lower is better) Translates to: HNYLNVILSYWPLES*KGEESCASECVDLF Trigger: AAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGACAGAATGACATTAAGGTAATTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488173.6 |
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CDS CCA 90 bp | GCATACCTTGTAGTTAGTGAAGTTATCTACCTAAATATTGGCCAATaGAATATGAGCAGTAGTGCTGTACACAGTTATCAGGATGAGCAC | + |
Preference number: 5 (lower is better) Translates to: AYLVVSEVIYLNIGQ*NMSSSAVHSYQDEH Trigger: GTGCTCATCCTGATAACTGTGTACAGCACTACTGCTCATATTCCATTGGCCAATATTTAGGTAGATAACTTCACTAACTACAAGGTATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000493473.2 ENST00000653088.1 ENST00000654755.1 ENST00000655719.1 ENST00000656281.1 ENST00000659796.1 |
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CDS CCA 90 bp | GATGTACCATCAACATGGCCTTCGGTAATATCAAAGATATTTATCTaGATTACCAGACAGAGACTCTTCTCTTCCCTTACTTTTCCCCAA | + |
Preference number: 5 (lower is better) Translates to: DVPSTWPSVISKIFI*ITRQRLFSSLTFPQ Trigger: TTGGGGAAAAGTAAGGGAAGAGAAGAGTCTCTGTCTGGTAATCCAGATAAATATCTTTGATATTACCGAAGGCCATGTTGATGGTACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 90 bp | TTTATTGTAGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTAT | + |
Preference number: 5 (lower is better) Translates to: FIVVCSWLPCSRWIC*IPLLAIQLVNASVY Trigger: ATAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACTACAATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657422.1 ENST00000659266.1 ENST00000664365.1 |
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CDS GCA 90 bp | CTTTATTGTAGTTTGTCCCAATGCACAGCCTATGGAGAAAAACCATaGATGTTGGCAAAGAATCAAATTACAAGGCCAAGATATGACATA | + |
Preference number: 5 (lower is better) Translates to: LYCSLSQCTAYGEKP*MLAKNQITRPRYDI Trigger: TATGTCATATCTTGGCCTTGTAATTTGATTCTTTGCCAACATGCATGGTTTTTCTCCATAGGCTGTGCATTGGGACAAACTACAATAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000474168.6 ENST00000655584.1 ENST00000660784.1 |
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CDS TCA 90 bp | CTTTCAGATTTTATCAGTCAGGTAAAGCTAAGGAATTCCGTTGTGTaGCATAACATTTCTGAAACATCCCAAGACACTTCTCTTTTCATC | + |
Preference number: 5 (lower is better) Translates to: LSDFISQVKLRNSVV*HNISETSQDTSLFI Trigger: GATGAAAAGAGAAGTGTCTTGGGATGTTTCAGAAATGTTATGTCACACAACGGAATTCCTTAGCTTTACCTGACTGATAAAATCTGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671181.1 |
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CDS TCA 72 bp | ACTGTGAGCTGTACTACCCTAGGGTTCAGGGAGGGGTaGTGCAGGCACTCCTTTGGTCGCTCCAGCTGGTGT | + |
Preference number: 6 (lower is better) Translates to: TVSCTTLGFREG*CRHSFGRSSWC Trigger: ACACCAGCTGGAGCGACCAAAGGAGTGCCTGCATCACCCCTCCCTGAACCCTAGGGTAGTACAGCTCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS TCA 72 bp | GCTGTCTTGCTGATTGTAGAGCCCCGGGACCTTGAGTaGACACAGGCAGTACCAGGGAGTGGTTACAGCAGG | + |
Preference number: 6 (lower is better) Translates to: AVLLIVEPRDLE*TQAVPGSGYSR Trigger: CCTGCTGTAACCACTCCCTGGTACTGCCTGTGTTCACTCAAGGTCCCGGGGCTCTACAATCAGCAAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655719.1 ENST00000655806.1 ENST00000662054.1 ENST00000664163.1 |
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CDS CCA 72 bp | CCTAGGGTTCAGGGAGGGGTGATGCAGGCACTCCTTTaGTCGCTCCAGCTGGTGTCTCACTATGTTGTGTGT | + |
Preference number: 6 (lower is better) Translates to: PRVQGGVMQALL*SLQLVSHYVVC Trigger: ACACACAACATAGTGAGACACCAGCTGGAGCGACCAAAGGAGTGCCTGCATCACCCCTCCCTGAACCCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS TCA 72 bp | CTCCTTTTGCTGATTGTAGAGCCCCGGGACCTTGAGTaGACACAGGCAGTACCAGGGAGTGGTTACAGCAGG | + |
Preference number: 6 (lower is better) Translates to: LLLLIVEPRDLE*TQAVPGSGYSR Trigger: CCTGCTGTAACCACTCCCTGGTACTGCCTGTGTTCACTCAAGGTCCCGGGGCTCTACAATCAGCAAAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662016.1 |
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CDS CCA 72 bp | CCCTCAAGCACACAGATTCTCTCTCTGCACCTCTGCTaGGGCATGGGAAGTGGTGGTGAAGGCAATTCAAGC | + |
Preference number: 6 (lower is better) Translates to: PSSTQILSLHLC*GMGSGGEGNSS Trigger: GCTTGAATTGCCTTCACCACCACTTCCCATGCCCCAGCAGAGGTGCAGAGAGAGAATCTGTGTGCTTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS CAA 90 bp | AACCGCCGATGCCACCTCTTTCCCACTCCCAGCAACAGCAGCATGTaGCAGGGATCATCTCTGGTTGCTAGGCGAAGTAGAACACAGCAA | + |
Preference number: 6 (lower is better) Translates to: NRRCHLFPTPSNSSM*QGSSLVARRSRTQQ Trigger: TTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAAAGAGGTGGCATCGGCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000654755.1 ENST00000655719.1 ENST00000655806.1 ENST00000658280.1 ENST00000659789.1 ENST00000659796.1 ENST00000662016.1 ENST00000662054.1 ENST00000664163.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CAA 90 bp | TCAGCCAAGCCTTATGTCCTCCCTTTCAGTACAGTGAGCTTCTACTaGGGCCAGGGTATGTCCAGAAATGGCATCCAGGAGCCAGCGCCT | + |
Preference number: 6 (lower is better) Translates to: SAKPYVLPFSTVSFY*GQGMSRNGIQEPAP Trigger: AGGCGCTGGCTCCTGGATGCCATTTCTGGACATACCCTGGCCCAAGTAGAAGCTCACTGTACTGAAAGGGAGGACATAAGGCTTGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | CAATGCTGTCTTGCTGATTGTAGAGCCCCGGGACCTTaGGTGAACACAGGCAGTACCAGGGAGTGGTTACAG | + |
Preference number: 6 (lower is better) Translates to: QCCLADCRAPGP*VNTGSTREWLQ Trigger: CTGTAACCACTCCCTGGTACTGCCTGTGTTCACTCAAGGTCCCGGGGCTCTACAATCAGCAAGACAGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655719.1 ENST00000655806.1 ENST00000662054.1 ENST00000664163.1 |
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CDS GCA 72 bp | CTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATTaGCACTACTGCCTCAGACCCACAGCAAGTACTGCC | + |
Preference number: 6 (lower is better) Translates to: LSFTQAGGVSPH*HYCLRPTASTA Trigger: GGCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 72 bp | ACACAGGCAGTACCAGGGAGTGGTTACAGCAGGCCTTaGGTGAGACACAGAGCTATGTTGGCTTCATCTCTG | + |
Preference number: 6 (lower is better) Translates to: TQAVPGSGYSRP*VRHRAMLASSL Trigger: CAGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGTACTGCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655719.1 ENST00000664163.1 |
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CDS CAA 72 bp | CACTCCTTTGGTCGCTCCAGCTGGTGTCTCACTATGTaGTGTGTAACCCAAGTCCACCGGTTCCAAGCACAG | + |
Preference number: 6 (lower is better) Translates to: HSFGRSSWCLTM*CVTQVHRFQAQ Trigger: CTGTGCTTGGAACCGGTGGACTTGGGTTACACACAACATAGTGAGACACCAGCTGGAGCGACCAAAGGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS CAA 72 bp | TGCCACCTCTTTCCCACTCCCAGCAACAGCAGCATGTaGCAGGGATCATCTCTGGTTGCTAGGCGAAGTAGA | + |
Preference number: 6 (lower is better) Translates to: CHLFPTPSNSSM*QGSSLVARRSR Trigger: TCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAAAGAGGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000654755.1 ENST00000655719.1 ENST00000655806.1 ENST00000658280.1 ENST00000659789.1 ENST00000659796.1 ENST00000662016.1 ENST00000662054.1 ENST00000664163.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS GCA 72 bp | CTGGATATCTCCCTTAAGTGTAGTGGGTTCCCCACTTaGCCACAGCTAAGTCTAGAGATGCTGTCCAGGAGC | + |
Preference number: 6 (lower is better) Translates to: LDISLKCSGFPT*PQLSLEMLSRS Trigger: GCTCCTGGACAGCATCTCTAGACTTAGCTGTGGGCAAGTGGGGAACCCACTACACTTAAGGGAGATATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 72 bp | GCACACAGATTCTCTCTCTGCACCTCTGCTGGGGCATaGGAAGTGGTGGTGAAGGCAATTCAAGCTTGTCTT | + |
Preference number: 6 (lower is better) Translates to: AHRFSLCTSAGA*EVVVKAIQACL Trigger: AAGACAAGCTTGAATTGCCTTCACCACCACTTCCCATGCCCCAGCAGAGGTGCAGAGAGAGAATCTGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS CCA 72 bp | GACTTTCTGACTTCAGGTTACCAGCTGTGGTGGTTATaGGGCAAAACTCCTTCCATGTCCTGCGGGACCTCA | + |
Preference number: 6 (lower is better) Translates to: DFLTSGYQLWWL*GKTPSMSCGTS Trigger: TGAGGTCCCGCAGGACATGGAAGGAGTTTTGCCCCATAACCACCACAGCTGGTAACCTGAAGTCAGAAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659796.1 |
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CDS CAA 72 bp | CCATGTCTCACAGGGTGGCAGACAAGAGAAGAGGGCTaGTGCAGGGAAACTCCCACTGTCTTCAGAAACCTT | + |
Preference number: 6 (lower is better) Translates to: PCLTGWQTREEG*CRETPTVFRNL Trigger: AAGGTTTCTGAAGACAGTGGGAGTTTCCCTGCACAAGCCCTCTTCTCTTGTCTGCCACCCTGTGAGACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655228.1 ENST00000670655.1 |
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CDS CAA 72 bp | GGTTACAGCAGGCCTTGGGTGAGACACAGAGCTATGTaGGCTTCATCTCTGACCCAGTGCAGTCATAGTGGT | + |
Preference number: 6 (lower is better) Translates to: GYSRPWVRHRAM*ASSLTQCSHSG Trigger: ACCACTATGACTGCACTGGGTCAGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654755.1 ENST00000659789.1 ENST00000671181.1 |
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CDS CAA 72 bp | TCTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATaGCCACTACTGCCTCAGACCCACAGCAAGTACTGC | + |
Preference number: 6 (lower is better) Translates to: SILYSSRRSLSP*PLLPQTHSKYC Trigger: GCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 72 bp | AACACAGGCAGTACCAGGGAGTGGTTACAGCAGGCCTaGGGTGAGACACAGAGCTATGTTGGCTTCATCTCT | + |
Preference number: 6 (lower is better) Translates to: NTGSTREWLQQA*GETQSYVGFIS Trigger: AGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGTACTGCCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655719.1 ENST00000662054.1 ENST00000664163.1 |
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CDS CAA 72 bp | CTTCATTATCTTGCCCCCAACAGGCCCTGGTGTGTGTaGCTCCCCTCTCTGTGTCCGTGTGTTCTCAATGTT | + |
Preference number: 6 (lower is better) Translates to: LHYLAPNRPWCV*LPSLCPCVLNV Trigger: AACATTGAGAACACACGGACACAGAGAGGGGAGCAACACACACCAGGGCCTGTTGGGGGCAAGATAATGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668405.1 |
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CDS CAA 90 bp | TCACTCTTTTCTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATaGCCACTACTGCCTCAGACCCACAGCAAGTACTGCCTGGCTACC | + |
Preference number: 6 (lower is better) Translates to: SLFSILYSSRRSLSP*PLLPQTHSKYCLAT Trigger: GGTAGCCAGGCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAGAAAAGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 90 bp | GCATCCAGGAGCCAGCGCCTGAAATTAGGAGCCTTTAGTATTCTCTaGGTGCTCTATTCTATTGCAGCTGAGCTGGTGCCCGAGCCACAA | + |
Preference number: 6 (lower is better) Translates to: ASRSQRLKLGAFSIL*VLYSIAAELVPEPQ Trigger: TTGTGGCTCGGGCACCAGCTCAGCTGCAATAGAATAGAGCACCAAGAGAATACTAAAGGCTCCTAATTTCAGGCGCTGGCTCCTGGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | CTCAGGAGCACACTTTGTTCTCCAACTCACTGTGGCTaGGCTGGTTCTCAAGCTGCAAGACAAAGTCCCCTT | + |
Preference number: 6 (lower is better) Translates to: LRSTLCSPTHCG*AGSQAARQSPL Trigger: AAGGGGACTTTGTCTTGCAGCTTGAGAACCAGCTCAGCCACAGTGAGTTGGAGAACAAAGTGTGCTCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 72 bp | AATCATGGTGGAAGGCAAAAGCCATGTCTCACAGGGTaGCAGACAAGAGAAGAGGGCTTGTGCAGGGAAACT | + |
Preference number: 6 (lower is better) Translates to: NHGGRQKPCLTG*QTREEGLCRET Trigger: AGTTTCCCTGCACAAGCCCTCTTCTCTTGTCTGCCACCCTGTGAGACATGGCTTTTGCCTTCCACCATGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655228.1 ENST00000670655.1 |
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CDS CCA 72 bp | ATTCAATGCTGTCCAGGGAGTGGTTACAGCAGGCCTTaGGTGAGACACAGAGCTATGTTGGCTTCATCTCTG | + |
Preference number: 6 (lower is better) Translates to: IQCCPGSGYSRP*VRHRAMLASSL Trigger: CAGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGACAGCATTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654755.1 ENST00000659789.1 ENST00000671181.1 |
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CDS CCA 72 bp | CTCCCAGCAACAGCAGCATGTTGCAGGGATCATCTCTaGTTGCTAGGCGAAGTAGAACACAGCAATTGTGAG | + |
Preference number: 6 (lower is better) Translates to: LPATAACCRDHL*LLGEVEHSNCE Trigger: CTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000654755.1 ENST00000655719.1 ENST00000655806.1 ENST00000658280.1 ENST00000659789.1 ENST00000659796.1 ENST00000662016.1 ENST00000662054.1 ENST00000664163.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CCA 72 bp | GACTGCAATAAGTTAGAGCCAAAGCCAACACAGCACTaGGTCTCACCCAAGACATGGCAACCACTTTCTGGC | + |
Preference number: 6 (lower is better) Translates to: DCNKLEPKPTQH*VSPKTWQPLSG Trigger: GCCAGAAAGTGGTTGCCATGTCTTGGGTGAGACCCAGTGCTGTGTTGGCTTTGGCTCTAACTTATTGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 72 bp | GTTGAAAGAGGCACTGAAGAGATAGAAAACTCAGTCTaGAACCGCCGATGCCACCTCTTTCCCACTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: VERGTEEIENSV*NRRCHLFPTPS Trigger: GCTGGGAGTGGGAAAGAGGTGGCATCGGCGGTTCAAGACTGAGTTTTCTATCTCTTCAGTGCCTCTTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 27 transcripts: ENST00000488173.6 ENST00000492553.6 ENST00000493473.2 ENST00000653088.1 ENST00000654609.1 ENST00000654755.1 ENST00000655719.1 ENST00000655806.1 ENST00000656322.1 ENST00000657422.1 ENST00000658030.1 ENST00000658280.1 ENST00000659266.1 ENST00000659789.1 ENST00000659796.1 ENST00000660784.1 ENST00000661702.1 ENST00000662016.1 ENST00000662054.1 ENST00000663627.1 ENST00000663767.1 ENST00000664163.1 ENST00000664365.1 ENST00000664909.1 ENST00000667319.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CAA 72 bp | CCAGCAACAGCAGCATGTTGCAGGGATCATCTCTGGTaGCTAGGCGAAGTAGAACACAGCAATTGTGAGGCT | + |
Preference number: 6 (lower is better) Translates to: PATAACCRDHLW*LGEVEHSNCEA Trigger: AGCCTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000654755.1 ENST00000655719.1 ENST00000655806.1 ENST00000658280.1 ENST00000659789.1 ENST00000659796.1 ENST00000662016.1 ENST00000662054.1 ENST00000664163.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CAA 90 bp | TTCCCACTCCCAGCAACAGCAGCATGTTGCAGGGATCATCTCTGGTaGCTAGGCGAAGTAGAACACAGCAATTGTGAGGCTCTGAATTCA | + |
Preference number: 6 (lower is better) Translates to: FPLPATAACCRDHLW*LGEVEHSNCEALNS Trigger: TGAATTCAGAGCCTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000654755.1 ENST00000655719.1 ENST00000655806.1 ENST00000658280.1 ENST00000659789.1 ENST00000659796.1 ENST00000662016.1 ENST00000662054.1 ENST00000664163.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CAA 90 bp | ACTTGCCCACAGCTAAGTCTAGAGATGCTGTCCAGGAGCCACAAATaGGTGGTGATCTCAGGAGCACACTTTGTTCTCCAACTCACTGTG | + |
Preference number: 6 (lower is better) Translates to: TCPQLSLEMLSRSHK*VVISGAHFVLQLTV Trigger: CACAGTGAGTTGGAGAACAAAGTGTGCTCCTGAGATCACCACCAATTTGTGGCTCCTGGACAGCATCTCTAGACTTAGCTGTGGGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | GCCTCAGACCCACAGCAAGTACTGCCTGGCTACCATTaGTGTTCATTTAAGGGCCAAGCCATTTTCAGTCAG | + |
Preference number: 6 (lower is better) Translates to: ASDPQQVLPGYH*CSFKGQAIFSQ Trigger: CTGACTGAAAATGGCTTGGCCCTTAAATGAACATCAATGGTAGCCAGGCAGTACTTGCTGTGGGTCTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | CTGTCCCTGCTGAACTGCCTGGAACTGTGGGAGAGTTaGTATAAGCAATCCTATGGTCATAACCACTGCGAC | + |
Preference number: 6 (lower is better) Translates to: LSLLNCLELWES*YKQSYGHNHCD Trigger: GTCGCAGTGGTTATGACCATAGGATTGCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 72 bp | AATTGTGAGGCTCTGAATTCAATGCTGTCCAGGGAGTaGTTACAGCAGGCCTTGGGTGAGACACAGAGCTAT | + |
Preference number: 6 (lower is better) Translates to: NCEALNSMLSRE*LQQALGETQSY Trigger: ATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGACAGCATTGAATTCAGAGCCTCACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654755.1 ENST00000658280.1 ENST00000659789.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CCA 72 bp | GCACTGGGTCTCACCCAAGACATGGCAACCACTTTCTaGCTACTGCTTATGTTCACTCAAGGCTCAAGTGTT | + |
Preference number: 6 (lower is better) Translates to: ALGLTQDMATTF*LLLMFTQGSSV Trigger: AACACTTGAGCCTTGAGTGAACATAAGCAGTAGCCAGAAAGTGGTTGCCATGTCTTGGGTGAGACCCAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 72 bp | AATTCAATGCTGTCCAGGGAGTGGTTACAGCAGGCCTaGGGTGAGACACAGAGCTATGTTGGCTTCATCTCT | + |
Preference number: 6 (lower is better) Translates to: NSMLSREWLQQA*GETQSYVGFIS Trigger: AGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGACAGCATTGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654755.1 ENST00000658280.1 ENST00000659789.1 ENST00000664909.1 ENST00000668405.1 ENST00000671181.1 |
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CDS CAA 72 bp | AGCCAGCGCCTGAAATTAGGAGCCTTTAGTATTCTCTaGGTGCTCTATTCTATTGCAGCTGAGCTGGTGCCC | + |
Preference number: 6 (lower is better) Translates to: SQRLKLGAFSIL*VLYSIAAELVP Trigger: GGGCACCAGCTCAGCTGCAATAGAATAGAGCACCAAGAGAATACTAAAGGCTCCTAATTTCAGGCGCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | GGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTATTG | + |
Preference number: 6 (lower is better) Translates to: GGSLECGKQKLL*AKITPLHSILL Trigger: CAATAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000462928.5 ENST00000654609.1 ENST00000660789.1 ENST00000662016.1 ENST00000663627.1 ENST00000666445.1 |
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CDS TCA 72 bp | GGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTTTTG | + |
Preference number: 6 (lower is better) Translates to: GGSLECGKQKLL*AKITPLHSILL Trigger: CAAAAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489012.5 |
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CDS TCA 72 bp | TGGTATTCAAGGCTCAAGGGTTATTTAGGCAGCAGGTaGTGTATCCTGCCAGACCTGGGTCCTTCTCTTCAA | + |
Preference number: 6 (lower is better) Translates to: WYSRLKGYLGSR*CILPDLGPSLQ Trigger: TTGAAGAGAAGGACCCAGGTCTGGCAGGATACATCACCTGCTGCCTAAATAACCCTTGAGCCTTGAATACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | ATTCAGCCAAGCCTTATGTCCTCCCTTTCAGTACAGTaGGCTTCTACTTGGGCCAGGGTATGTCCAGAAATG | + |
Preference number: 6 (lower is better) Translates to: IQPSLMSSLSVQ*ASTWARVCPEM Trigger: CATTTCTGGACATACCCTGGCCCAAGTAGAAGCTCACTGTACTGAAAGGGAGGACATAAGGCTTGGCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS GCA 72 bp | GGGCCAAGCCATTTTCAGTCAGTTTGTTGTAGATGCTaGCACACCTGGATATCTCCCTTAAGTGTAGTGGGT | + |
Preference number: 6 (lower is better) Translates to: GPSHFQSVCCRC*HTWISPLSVVG Trigger: ACCCACTACACTTAAGGGAGATATCCAGGTGTGGCAGCATCTACAACAAACTGACTGAAAATGGCTTGGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS GCA 72 bp | CACAGCAATTGTGAGGCTCTGAATTCAATGCTGTCCTaGTATGTGAGGAGACCCAGGTATTCCCAGGTACTA | + |
Preference number: 6 (lower is better) Translates to: HSNCEALNSMLS*YVRRPRYSQVL Trigger: TAGTACCTGGGAATACCTGGGTCTCCTCACATAGCAGGACAGCATTGAATTCAGAGCCTCACAATTGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659796.1 ENST00000662016.1 |
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CDS CCA 72 bp | CAAGATCACGCCACTACACTCCATTCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: QDHATTLHSIGH*NHGRGKNHVLL Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAATGGAGTGTAGTGGCGTGATCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000462928.5 ENST00000654609.1 ENST00000660789.1 ENST00000662016.1 ENST00000663627.1 ENST00000666445.1 |
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CDS CCA 72 bp | GGGGACTGGCTTTGTCCAGGCCTCAGAAAATATGGATaGCTGGGTCATGTTGTACTCAACTCTACTTGTTCA | + |
Preference number: 6 (lower is better) Translates to: GDWLCPGLRKYG*LGHVVLNSTCS Trigger: TGAACAAGTAGAGTTGAGTACAACATGACCCAGCCATCCATATTTTCTGAGGCCTGGACAAAGCCAGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 72 bp | CAGCTAAGTCTAGAGATGCTGTCCAGGAGCCACAAATaGGTGGTGATCTCAGGAGCACACTTTGTTCTCCAA | + |
Preference number: 6 (lower is better) Translates to: QLSLEMLSRSHK*VVISGAHFVLQ Trigger: TTGGAGAACAAAGTGTGCTCCTGAGATCACCACCAATTTGTGGCTCCTGGACAGCATCTCTAGACTTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | CATAAATCTTCCACCACGTGGCTGTGCTGGAGTATTTaGGCCTACTCTGGCTTGGAAGACTGCTTGATTCAT | + |
Preference number: 6 (lower is better) Translates to: HKSSTTWLCWSI*AYSGLEDCLIH Trigger: ATGAATCAAGCAGTCTTCCAAGCCAGAGTAGGCTCAAATACTCCAGCACAGCCACGTGGTGGAAGATTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000470546.5 ENST00000654609.1 ENST00000655980.1 ENST00000658280.1 ENST00000661439.1 ENST00000661702.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000666234.1 ENST00000666445.1 ENST00000667319.1 ENST00000670024.1 |
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CDS TCA 72 bp | CCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCA | + |
Preference number: 6 (lower is better) Translates to: PHSWLPCSRWIC*IPLLAIQLVNA Trigger: TGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000492553.6 ENST00000653088.1 ENST00000655584.1 ENST00000655806.1 ENST00000656281.1 ENST00000656322.1 ENST00000657261.1 ENST00000658030.1 ENST00000659031.1 ENST00000662016.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000666364.1 ENST00000666445.1 ENST00000667319.1 ENST00000667576.1 |
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CDS GCA 72 bp | AGACACAGAGCTATGTTGGCTTCATCTCTGACCCAGTaGAGTCATAGTGGTGATGGCTACAGAGGTGTTTAT | + |
Preference number: 6 (lower is better) Translates to: RHRAMLASSLTQ*SHSGDGYRGVY Trigger: ATAAACACCTCTGTAGCCATCACCACTATGACTGCACTGGGTCAGAGATGAAGCCAACATAGCTCTGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654755.1 ENST00000671181.1 |
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CDS GCA 72 bp | GTCTCACCCAAGACATGGCAACCACTTTCTGGCTACTaGTTATGTTCACTCAAGGCTCAAGTGTTCTTCCAT | + |
Preference number: 6 (lower is better) Translates to: VSPKTWQPLSGY*LCSLKAQVFFH Trigger: ATGGAAGAACACTTGAGCCTTGAGTGAACATAAGCAGTAGCCAGAAAGTGGTTGCCATGTCTTGGGTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CCA 72 bp | CGCCACTACACTCCATTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA | + |
Preference number: 6 (lower is better) Translates to: RHYTPFYWPLES*KGEESCASECV Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAATGGAGTGTAGTGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000462928.5 ENST00000654609.1 ENST00000660789.1 ENST00000662016.1 ENST00000663627.1 ENST00000666445.1 |
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CDS CCA 72 bp | GTGATCATGGGTCAGGCAAAAGTTTCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: VIMGQAKVSIGH*NHGRGKNHVLL Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAAACTTTTGCCTGACCCATGATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489012.5 ENST00000658030.1 |
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CDS CAA 72 bp | ACCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGC | + |
Preference number: 6 (lower is better) Translates to: TTLLAAVLKMDL*NSIVGHSASKC Trigger: GCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000492553.6 ENST00000653088.1 ENST00000655584.1 ENST00000655806.1 ENST00000656281.1 ENST00000656322.1 ENST00000657261.1 ENST00000658030.1 ENST00000659031.1 ENST00000662016.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000666364.1 ENST00000666445.1 ENST00000667319.1 ENST00000667576.1 |
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CDS TCA 72 bp | TTTTGCACCGCTTCTGACTTGGAGAACTATTTTTGGTaGCTTTCCAACATTTCCACGCATGCAGCCAACTCC | + |
Preference number: 6 (lower is better) Translates to: FCTASDLENYFW*LSNISTHAANS Trigger: GGAGTTGGCTGCATGCGTGGAAATGTTGGAAAGTCACCAAAAATAGTTCTCCAAGTCAGAAGCGGTGCAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 19 transcripts: ENST00000470546.5 ENST00000489012.5 ENST00000655228.1 ENST00000655980.1 ENST00000657422.1 ENST00000660784.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663767.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000666364.1 ENST00000666445.1 ENST00000667319.1 ENST00000667576.1 ENST00000668405.1 ENST00000668425.1 |
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CDS TCA 72 bp | CTTTTCCCCAAACAAATGAAGATTCTCTGTCCCTGCTaGACTGCCTGGAACTGTGGGAGAGTTGATATAAGC | + |
Preference number: 6 (lower is better) Translates to: LFPKQMKILCPC*TAWNCGRVDIS Trigger: GCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTCATTTGTTTGGGGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | ACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCA | + |
Preference number: 6 (lower is better) Translates to: TYSWLPCSRWIC*IPLLAIQLVNA Trigger: TGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671181.1 |
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CDS CCA 72 bp | GGGTCAGGCAAAAGTTTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA | + |
Preference number: 6 (lower is better) Translates to: GSGKSFYWPLES*KGEESCASECV Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAAACTTTTGCCTGACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489012.5 ENST00000658030.1 |
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CDS CCA 72 bp | AGGGCATGGCTTTATTGTAGTTTGTCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: RAWLYCSLSIGH*NHGRGKNHVLL Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGACAAACTACAATAAAGCCATGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 28 transcripts: ENST00000488287.2 ENST00000492553.6 ENST00000494897.5 ENST00000655228.1 ENST00000655806.1 ENST00000655980.1 ENST00000656322.1 ENST00000657261.1 ENST00000658280.1 ENST00000659031.1 ENST00000659789.1 ENST00000661439.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000664163.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000666364.1 ENST00000667319.1 ENST00000667576.1 ENST00000668405.1 ENST00000668425.1 ENST00000670024.1 ENST00000670179.1 ENST00000670655.1 |
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CDS CCA 72 bp | TGCCAAAAGGTTCACATGTCTCTGTCACTCCAGGATTaGTCCTCTGGTGCCTTATTTAGTCTGTTTGGTAAG | + |
Preference number: 6 (lower is better) Translates to: CQKVHMSLSLQD*SSGALFSLFGK Trigger: CTTACCAAACAGACTAAATAAGGCACCAGAGGACCAATCCTGGAGTGACAGAGACATGTGAACCTTTTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 72 bp | ATCCAGTCAGGGCATGGCTTTATTGTAGTTTGTCTATaGGCCACTGGAATCATGGAAGGGGGAAGAATCATG | + |
Preference number: 6 (lower is better) Translates to: IQSGHGFIVVCL*ATGIMEGGRIM Trigger: CATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGACAAACTACAATAAAGCCATGCCCTGACTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 28 transcripts: ENST00000488287.2 ENST00000492553.6 ENST00000494897.5 ENST00000655228.1 ENST00000655806.1 ENST00000655980.1 ENST00000656322.1 ENST00000657261.1 ENST00000658280.1 ENST00000659031.1 ENST00000659789.1 ENST00000661439.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000664163.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000666364.1 ENST00000667319.1 ENST00000667576.1 ENST00000668405.1 ENST00000668425.1 ENST00000670024.1 ENST00000670179.1 ENST00000670655.1 |
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CDS CAA 72 bp | ATTGTGTTGGCATCTTCACAGCTGCTCTACTTCTTTTaGGCAGATTCACTGCCTCTTCGCCAAGTCACAATG | + |
Preference number: 6 (lower is better) Translates to: IVLASSQLLYFF*ADSLPLRQVTM Trigger: CATTGTGACTTGGCGAAGAGGCAGTGAATCTGCCAAAAAGAAGTAGAGCAGCTGTGAAGATGCCAACACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000654609.1 ENST00000655228.1 ENST00000657422.1 ENST00000658280.1 ENST00000659266.1 ENST00000660789.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000668425.1 ENST00000670655.1 |
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CDS CAA 72 bp | TACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGC | + |
Preference number: 6 (lower is better) Translates to: YVLLAAVLKMDL*NSIVGHSASKC Trigger: GCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671181.1 |
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CDS CAA 90 bp | TGGAATTGCACCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTA | + |
Preference number: 6 (lower is better) Translates to: WNCTTLLAAVLKMDL*NSIVGHSASKCICL Trigger: TAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGGTGCAATTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000492553.6 ENST00000653088.1 ENST00000655584.1 ENST00000655806.1 ENST00000656281.1 ENST00000656322.1 ENST00000657261.1 ENST00000658030.1 ENST00000659031.1 ENST00000662016.1 ENST00000662097.1 ENST00000662504.1 ENST00000663767.1 ENST00000666364.1 ENST00000666445.1 ENST00000667319.1 ENST00000667576.1 |
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CDS CAA 90 bp | GAGTACTCAATTGTGTTGGCATCTTCACAGCTGCTCTACTTCTTTTaGGCAGATTCACTGCCTCTTCGCCAAGTCACAATGAGACAGATT | + |
Preference number: 6 (lower is better) Translates to: EYSIVLASSQLLYFF*ADSLPLRQVTMRQI Trigger: AATCTGTCTCATTGTGACTTGGCGAAGAGGCAGTGAATCTGCCAAAAAGAAGTAGAGCAGCTGTGAAGATGCCAACACAATTGAGTACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000654609.1 ENST00000655228.1 ENST00000657422.1 ENST00000658280.1 ENST00000659266.1 ENST00000660789.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000668425.1 ENST00000670655.1 |
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CDS CAA 90 bp | AATGCCGTCTACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTA | + |
Preference number: 6 (lower is better) Translates to: NAVYVLLAAVLKMDL*NSIVGHSASKCICL Trigger: TAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTAGACGGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671181.1 |
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CDS TCA 72 bp | CTGCCCTATGATGCTTTCTGCTGTGACAAGCAGCACTaGTTTCCTATGCAAAGTTCCACAATAACTGCAATC | + |
Preference number: 6 (lower is better) Translates to: LPYDAFCCDKQH*FPMQSSTITAI Trigger: GATTGCAGTTATTGTGGAACTTTGCATAGGAAATCAGTGCTGCTTGTCACAGCAGAAAGCATCATAGGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS TCA 72 bp | GTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCA | + |
Preference number: 6 (lower is better) Translates to: VCSWLPCSRWIC*IPLLAIQLVNA Trigger: TGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657422.1 ENST00000659266.1 ENST00000664365.1 |
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CDS GCA 72 bp | TGGATATCCATAAAATGCCGTCTACGTACTCCTGGCTaGCGTGCTCAAGATGGATTTGTTGAATTCCATTGT | + |
Preference number: 6 (lower is better) Translates to: WISIKCRLRTPG*RAQDGFVEFHC Trigger: ACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTAGACGGCATTTTATGGATATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671181.1 |
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CDS CCA 72 bp | CATCTCTCCTTGTGTCCACCACAGTTTGTAATATTCTaGATAACACCTAAAGCCAGCATCACACTGGATTGG | + |
Preference number: 6 (lower is better) Translates to: HLSLCPPQFVIF*ITPKASITLDW Trigger: CCAATCCAGTGTGATGCTGGCTTTAGGTGTTATCCAGAATATTACAAACTGTGGTGGACACAAGGAGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 72 bp | ATAACGGGTCACCCCAAATCCAGTAACATGTTAGTCTaGCAGAGTGATAGATGTACCATCAACATGGCCTTC | + |
Preference number: 6 (lower is better) Translates to: ITGHPKSSNMLV*QSDRCTINMAF Trigger: GAAGGCCATGTTGATGGTACATCTATCACTCTGCAAGACTAACATGTTACTGGATTTGGGGTGACCCGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS CAA 72 bp | AGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGC | + |
Preference number: 6 (lower is better) Translates to: SLFLAAVLKMDL*NSIVGHSASKC Trigger: GCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657422.1 ENST00000659266.1 ENST00000664365.1 |
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CDS GCA 72 bp | AGAAAGAGTACTCAATTGTGTTGGCATCTTCACAGCTaGTCTACTTCTTTTTGGCAGATTCACTGCCTCTTC | + |
Preference number: 6 (lower is better) Translates to: RKSTQLCWHLHS*STSFWQIHCLF Trigger: GAAGAGGCAGTGAATCTGCCAAAAAGAAGTAGAGCAGCTGTGAAGATGCCAACACAATTGAGTACTCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 17 transcripts: ENST00000654609.1 ENST00000655228.1 ENST00000657422.1 ENST00000658280.1 ENST00000659266.1 ENST00000660789.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000668425.1 ENST00000670655.1 |
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CDS CCA 72 bp | AGAGAAGTTCTGATTACCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA | + |
Preference number: 6 (lower is better) Translates to: REVLITYWPLES*KGEESCASECV Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGTAATCAGAACTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000493473.2 ENST00000653088.1 ENST00000654755.1 ENST00000655719.1 ENST00000656281.1 ENST00000659796.1 |
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CDS CCA 72 bp | CTTAATGTCATTCTGTCCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA | + |
Preference number: 6 (lower is better) Translates to: LNVILSYWPLES*KGEESCASECV Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGACAGAATGACATTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488173.6 |
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CDS CCA 72 bp | ACAATTACCTTAATGTCATTCTGTCCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: TITLMSFCPIGH*NHGRGKNHVLL Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGACAGAATGACATTAAGGTAATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000488173.6 |
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CDS CAA 90 bp | TGGCTTTATTGTAGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTaGTTGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGT | + |
Preference number: 6 (lower is better) Translates to: WLYCSLFLAAVLKMD*LNSIVGHSASKCIC Trigger: ACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACTACAATAAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657422.1 ENST00000659266.1 ENST00000664365.1 |
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CDS CCA 72 bp | TTTTTGTCTGTTCCAATTAGAATTCCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: FLSVPIRIPIGH*NHGRGKNHVLL Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGAATTCTAATTGGAACAGACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000474168.6 ENST00000655584.1 ENST00000660784.1 |
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CDS CAA 72 bp | GTATTGGGTTTTTGTCTGTTCCAATTAGAATTCCTATaGGCCACTGGAATCATGGAAGGGGGAAGAATCATG | + |
Preference number: 6 (lower is better) Translates to: VLGFCLFQLEFL*ATGIMEGGRIM Trigger: CATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGAATTCTAATTGGAACAGACAAAAACCCAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000474168.6 ENST00000655584.1 ENST00000660784.1 |
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CDS CAA 72 bp | GTGTCTCAGCATTGCCGTATGGTTAAATTGACCCCATaGTCATTCCATGCTCATAAGTGTCCAATAAATTGC | + |
Preference number: 6 (lower is better) Translates to: VSQHCRMVKLTP*SFHAHKCPINC Trigger: GCAATTTATTGGACACTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000654609.1 ENST00000655228.1 ENST00000657422.1 ENST00000658280.1 ENST00000659266.1 ENST00000660789.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000668425.1 ENST00000670655.1 |
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CDS CAA 72 bp | ATAATGAAGGTGTCTCAGCATTGCCGTATGGTTAAATaGACCCCATTGTCATTCCATGCTCATAAGTGTCCA | + |
Preference number: 6 (lower is better) Translates to: IMKVSQHCRMVK*TPLSFHAHKCP Trigger: TGGACACTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACACCTTCATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000654609.1 ENST00000655228.1 ENST00000657422.1 ENST00000658280.1 ENST00000659266.1 ENST00000660789.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000668425.1 ENST00000670655.1 |
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CDS CAA 90 bp | GGAAAGGTCATAATGAAGGTGTCTCAGCATTGCCGTATGGTTAAATaGACCCCATTGTCATTCCATGCTCATAAGTGTCCAATAAATTGC | + |
Preference number: 6 (lower is better) Translates to: GKVIMKVSQHCRMVK*TPLSFHAHKCPINC Trigger: GCAATTTATTGGACACTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACACCTTCATTATGACCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000654609.1 ENST00000655228.1 ENST00000657422.1 ENST00000658280.1 ENST00000659266.1 ENST00000660789.1 ENST00000661439.1 ENST00000661702.1 ENST00000662504.1 ENST00000663627.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000668405.1 ENST00000668425.1 ENST00000670655.1 |
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CDS CAA 90 bp | CTTTATTGTAGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTA | + |
Preference number: 6 (lower is better) Translates to: LYCSLFLAAVLKMDL*NSIVGHSASKCICL Trigger: TAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACTACAATAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657422.1 ENST00000659266.1 ENST00000664365.1 |
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CDS TCA 72 bp | ACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCA | + |
Preference number: 6 (lower is better) Translates to: TGIMEGGRIMCF*MCRSLSSNGIA Trigger: TGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 46 transcripts: ENST00000462928.5 ENST00000474168.6 ENST00000488173.6 ENST00000488287.2 ENST00000489012.5 ENST00000492553.6 ENST00000493473.2 ENST00000494897.5 ENST00000653088.1 ENST00000654609.1 ENST00000654755.1 ENST00000655228.1 ENST00000655584.1 ENST00000655719.1 ENST00000655806.1 ENST00000655980.1 ENST00000656281.1 ENST00000656322.1 ENST00000657261.1 ENST00000658030.1 ENST00000658280.1 ENST00000659031.1 ENST00000659789.1 ENST00000659796.1 ENST00000660784.1 ENST00000660789.1 ENST00000661439.1 ENST00000662016.1 ENST00000662097.1 ENST00000662504.1 ENST00000663627.1 ENST00000663767.1 ENST00000664163.1 ENST00000664909.1 ENST00000665626.1 ENST00000665928.1 ENST00000666234.1 ENST00000666364.1 ENST00000666445.1 ENST00000667319.1 ENST00000667576.1 ENST00000668405.1 ENST00000668425.1 ENST00000670024.1 ENST00000670179.1 ENST00000670655.1 |
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CDS CAA 90 bp | CATAGTAAGATTGCCAGCAATCTTACTAATGGGAGCAATATAATTTaGTATCTGGATATCCATAAAATGCCGTCTACGTACTCCTGGCTG | + |
Preference number: 6 (lower is better) Translates to: HSKIASNLTNGSNII*YLDIHKMPSTYSWL Trigger: CAGCCAGGAGTACGTAGACGGCATTTTATGGATATCCAGATACAAAATTATATTGCTCCCATTAGTAAGATTGCTGGCAATCTTACTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671181.1 |
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CDS CCA 72 bp | TCAACATGGCCTTCGGTAATATCAAAGATATTTATCTaGATTACCAGACAGAGACTCTTCTCTTCCCTTACT | + |
Preference number: 6 (lower is better) Translates to: STWPSVISKIFI*ITRQRLFSSLT Trigger: AGTAAGGGAAGAGAAGAGTCTCTGTCTGGTAATCCAGATAAATATCTTTGATATTACCGAAGGCCATGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654755.1 |
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CDS TCA 72 bp | GATTTGTCAAGGAATTGTAGTACTTTTGGCTTAGACTaGCTTTCAAATTTAAGACCCCAGTGCACTTTAGCT | + |
Preference number: 6 (lower is better) Translates to: DLSRNCSTFGLD*LSNLRPQCTLA Trigger: AGCTAAAGTGCACTGGGGTCTTAAATTTGAAAGTCAGTCTAAGCCAAAAGTACTACAATTCCTTGACAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS GCA 72 bp | TGGGGGAAGGAAATGTTTCAGTCTTGGCATAATGGTTaGTGTATAGCACTGAATGAATTTTTGTTAAATGTG | + |
Preference number: 6 (lower is better) Translates to: WGKEMFQSWHNG*CIALNEFLLNV Trigger: CACATTTAACAAAAATTCATTCAGTGCTATACAGCAACCATTATGCCAAGACTGAAACATTTCCTTCCCCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000660789.1 |
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CDS CCA 72 bp | GTAGTTAGTGAAGTTATCTACCTAAATATTGGCCAATaGAATATGAGCAGTAGTGCTGTACACAGTTATCAG | + |
Preference number: 6 (lower is better) Translates to: VVSEVIYLNIGQ*NMSSSAVHSYQ Trigger: CTGATAACTGTGTACAGCACTACTGCTCATATTCCATTGGCCAATATTTAGGTAGATAACTTCACTAACTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000493473.2 ENST00000653088.1 ENST00000654755.1 ENST00000655719.1 ENST00000656281.1 ENST00000659796.1 |
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CDS CCA 72 bp | AGGTACTGTGAGTGCTTCCCTGATTTTTGGTTGTTGTaGAGATGTTTTCTTATGTGGATAGTTACTCATTTT | + |
Preference number: 6 (lower is better) Translates to: RYCECFPDFWLL*RCFLMWIVTHF Trigger: AAAATGAGTAACTATCCACATAAGAAAACATCTCCACAACAACCAAAAATCAGGGAAGCACTCACAGTACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000488173.6 ENST00000654755.1 |
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CDS CCA 72 bp | ATGGTCAATTTTATTCTTTTAGGATCGGACTCAAACTaGGTATATGTATTAGGAACCCACAGAATGCTTCAG | + |
Preference number: 6 (lower is better) Translates to: MVNFILLGSDSN*VYVLGTHRMLQ Trigger: CTGAAGCATTCTGTGGGTTCCTAATACATATACCCAGTTTGAGTCCGATCCTAAAAGAATAAAATTGACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664365.1 ENST00000670179.1 |
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CDS CAA 90 bp | TCCTCTTTTTGTGACCTGATGAATACTTTACTGCTTAAACATGTATaGGGTTTTTGTCTGTTCCAATTAGAATTCCTATTGGCCACTGGA | + |
Preference number: 6 (lower is better) Translates to: SSFCDLMNTLLLKHV*GFCLFQLEFLLATG Trigger: TCCAGTGGCCAATAGGAATTCTAATTGGAACAGACAAAAACCCAATACATGTTTAAGCAGTAAAGTATTCATCAGGTCACAAAAAGAGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000474168.6 ENST00000655584.1 ENST00000660784.1 |
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CDS CAA 72 bp | ATTGCCAGCAATCTTACTAATGGGAGCAATATAATTTaGTATCTGGATATCCATAAAATGCCGTCTACGTAC | + |
Preference number: 6 (lower is better) Translates to: IASNLTNGSNII*YLDIHKMPSTY Trigger: GTACGTAGACGGCATTTTATGGATATCCAGATACAAAATTATATTGCTCCCATTAGTAAGATTGCTGGCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671181.1 |