RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01192 (Homo sapiens)

Ensembl gene IDs: ENSG00000241369

Ensembl transcript IDs: ENST00000462928.5, ENST00000470546.5, ENST00000474168.6, ENST00000488173.6, ENST00000488287.2, ENST00000489012.5, ENST00000492553.6, ENST00000493473.2, ENST00000494897.5, ENST00000653088.1, ENST00000654609.1, ENST00000654755.1, ENST00000655228.1, ENST00000655584.1, ENST00000655719.1, ENST00000655806.1, ENST00000655980.1, ENST00000656281.1, ENST00000656322.1, ENST00000657261.1, ENST00000657422.1, ENST00000658030.1, ENST00000658280.1, ENST00000659031.1, ENST00000659266.1, ENST00000659789.1, ENST00000659796.1, ENST00000660784.1, ENST00000660789.1, ENST00000661439.1, ENST00000661702.1, ENST00000662016.1, ENST00000662054.1, ENST00000662097.1, ENST00000662504.1, ENST00000663627.1, ENST00000663767.1, ENST00000664163.1, ENST00000664365.1, ENST00000664909.1, ENST00000665626.1, ENST00000665928.1, ENST00000666234.1, ENST00000666364.1, ENST00000666445.1, ENST00000667319.1, ENST00000667576.1, ENST00000668405.1, ENST00000668425.1, ENST00000670024.1, ENST00000670179.1, ENST00000670655.1, ENST00000671181.1

Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp ACCGCCGATGCCACCTCTTTCCCACTCCCAGCAACAGCAGCATGTTaGAGGGATCATCTCTGGTTGCTAGGCGAAGTAGAACACAGCAAT +
Preference number: 5 (lower is better)
Translates to: TADATSFPLPATAAC*RDHLWLLGEVEHSN
Trigger: ATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAAAGAGGTGGCATCGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000654755.1
ENST00000655719.1
ENST00000655806.1
ENST00000658280.1
ENST00000659789.1
ENST00000659796.1
ENST00000662016.1
ENST00000662054.1
ENST00000664163.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS CCA 90 bp AGGCCACACAATCATGGTGGAAGGCAAAAGCCATGTCTCACAGGGTaGCAGACAAGAGAAGAGGGCTTGTGCAGGGAAACTCCCACTGTC +
Preference number: 5 (lower is better)
Translates to: RPHNHGGRQKPCLTG*QTREEGLCRETPTV
Trigger: GACAGTGGGAGTTTCCCTGCACAAGCCCTCTTCTCTTGTCTGCCACCCTGTGAGACATGGCTTTTGCCTTCCACCATGATTGTGTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655228.1
ENST00000670655.1
CDS TCA 90 bp ACCCAGGTATTCCCAGGTACTACATCAAGGGCCTTGGTGAGCCTCTaGGACTTTCTGACTTCAGGTTACCAGCTGTGGTGGTTATGGGGC +
Preference number: 5 (lower is better)
Translates to: TQVFPGTTSRALVSL*DFLTSGYQLWWLWG
Trigger: GCCCCATAACCACCACAGCTGGTAACCTGAAGTCAGAAAGTCTCAGAGGCTCACCAAGGCCCTTGATGTAGTACCTGGGAATACCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659796.1
ENST00000662016.1
CDS CCA 90 bp CTCCCTCAAGCACACAGATTCTCTCTCTGCACCTCTGCTGGGGCATaGGAAGTGGTGGTGAAGGCAATTCAAGCTTGTCTTGTCTATCCC +
Preference number: 5 (lower is better)
Translates to: LPQAHRFSLCTSAGA*EVVVKAIQACLVYP
Trigger: GGGATAGACAAGACAAGCTTGAATTGCCTTCACCACCACTTCCCATGCCCCAGCAGAGGTGCAGAGAGAGAATCTGTGTGCTTGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS TCA 90 bp GGTGGTGATCTCAGGAGCACACTTTGTTCTCCAACTCACTGTGGCTaGGCTGGTTCTCAAGCTGCAAGACAAAGTCCCCTTACTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GGDLRSTLCSPTHCG*AGSQAARQSPLTLP
Trigger: GGGAAGAGTAAGGGGACTTTGTCTTGCAGCTTGAGAACCAGCTCAGCCACAGTGAGTTGGAGAACAAAGTGTGCTCCTGAGATCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS GCA 90 bp CACTCTTTTCTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATTaGCACTACTGCCTCAGACCCACAGCAAGTACTGCCTGGCTACCA +
Preference number: 5 (lower is better)
Translates to: HSFLSFTQAGGVSPH*HYCLRPTASTAWLP
Trigger: TGGTAGCCAGGCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAGAAAAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 90 bp GGCTACTATTGGTATTCAAGGCTCAAGGGTTATTTAGGCAGCAGGTaGTGTATCCTGCCAGACCTGGGTCCTTCTCTTCAAGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: GYYWYSRLKGYLGSR*CILPDLGPSLQGSK
Trigger: CTTGCTGCCTTGAAGAGAAGGACCCAGGTCTGGCAGGATACATCACCTGCTGCCTAAATAACCCTTGAGCCTTGAATACCAATAGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 90 bp AGATGGCTAATTCAGCCAAGCCTTATGTCCTCCCTTTCAGTACAGTaGGCTTCTACTTGGGCCAGGGTATGTCCAGAAATGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: RWLIQPSLMSSLSVQ*ASTWARVCPEMASR
Trigger: CCTGGATGCCATTTCTGGACATACCCTGGCCCAAGTAGAAGCTCACTGTACTGAAAGGGAGGACATAAGGCTTGGCTGAATTAGCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 90 bp CAGGGATCATCTCTGGTTGCTAGGCGAAGTAGAACACAGCAATTGTaGGGCTCTGAATTCAATGCTGTCCTGCTATGTGAGGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: QGSSLVARRSRTQQL*GSEFNAVLLCEETQ
Trigger: CTGGGTCTCCTCACATAGCAGGACAGCATTGAATTCAGAGCCTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659796.1
ENST00000662016.1
CDS TCA 90 bp TATAAGGTGGGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTATTGGCCACTGGA +
Preference number: 5 (lower is better)
Translates to: YKVGGSLECGKQKLL*AKITPLHSILLATG
Trigger: TCCAGTGGCCAATAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCCCACCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462928.5
ENST00000654609.1
ENST00000660789.1
ENST00000662016.1
ENST00000663627.1
ENST00000666445.1
CDS CCA 90 bp AAGTTAGAGCCAAAGCCAACACAGCACTGGGTCTCACCCAAGACATaGCAACCACTTTCTGGCTACTGCTTATGTTCACTCAAGGCTCAA +
Preference number: 5 (lower is better)
Translates to: KLEPKPTQHWVSPKT*QPLSGYCLCSLKAQ
Trigger: TTGAGCCTTGAGTGAACATAAGCAGTAGCCAGAAAGTGGTTGCCATGTCTTGGGTGAGACCCAGTGCTGTGTTGGCTTTGGCTCTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 90 bp TACCAGACAGAGACTCTTCTCTTCCCTTACTTTTCCCCAAACAAATaGAGATTCTCTGTCCCTGCTGAACTGCCTGGAACTGTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: YQTETLLFPYFSPNK*RFSVPAELPGTVGE
Trigger: CTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTCATTTGTTTGGGGAAAAGTAAGGGAAGAGAAGAGTCTCTGTCTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS GCA 90 bp GAAGTAGAACACAGCAATTGTGAGGCTCTGAATTCAATGCTGTCCTaGTATGTGAGGAGACCCAGGTATTCCCAGGTACTACATCAAGGG +
Preference number: 5 (lower is better)
Translates to: EVEHSNCEALNSMLS*YVRRPRYSQVLHQG
Trigger: CCCTTGATGTAGTACCTGGGAATACCTGGGTCTCCTCACATAGCAGGACAGCATTGAATTCAGAGCCTCACAATTGCTGTGTTCTACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659796.1
ENST00000662016.1
CDS TCA 90 bp GAAGATTCTCTGTCCCTGCTGAACTGCCTGGAACTGTGGGAGAGTTaGTATAAGCAATCCTATGGTCATAACCACTGCGACTGCAATAAG +
Preference number: 5 (lower is better)
Translates to: EDSLSLLNCLELWES*YKQSYGHNHCDCNK
Trigger: CTTATTGCAGTCGCAGTGGTTATGACCATAGGATTGCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 90 bp CAGGGAAACTCCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: QGNSHCLQKPLAKQR*LGEIENPPRAEAAF
Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGGAGTTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655228.1
ENST00000670655.1
CDS CCA 90 bp GGCAGAAAGCATCTCTCCTTGTGTCCACCACAGTTTGTAATATTCTaGATAACACCTAAAGCCAGCATCACACTGGATTGGATCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GRKHLSLCPPQFVIF*ITPKASITLDWIQG
Trigger: CCCTTGGATCCAATCCAGTGTGATGCTGGCTTTAGGTGTTATCCAGAATATTACAAACTGTGGTGGACACAAGGAGAGATGCTTTCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 90 bp GAGCCTTTAGTATTCTCTTGGTGCTCTATTCTATTGCAGCTGAGCTaGTGCCCGAGCCACAAGACAAAGTCATCCTCACTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: EPLVFSWCSILLQLS*CPSHKTKSSSLFSI
Trigger: GATAGAAAAGAGTGAGGATGACTTTGTCTTGTGGCTCGGGCACCAGCTCAGCTGCAATAGAATAGAGCACCAAGAGAATACTAAAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 90 bp CCAAGATCACGCCACTACACTCCATTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTAGATCTCTTT +
Preference number: 5 (lower is better)
Translates to: PRSRHYTPFYWPLES*KGEESCASECVDLF
Trigger: AAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAATGGAGTGTAGTGGCGTGATCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000462928.5
ENST00000654609.1
ENST00000660789.1
ENST00000662016.1
ENST00000663627.1
ENST00000666445.1
CDS CCA 90 bp TTGCCACATACCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LPHTHCLQKPLAKQR*LGEIENPPRAEAAF
Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGGTATGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000462928.5
ENST00000474168.6
ENST00000492553.6
ENST00000494897.5
ENST00000655584.1
ENST00000655806.1
ENST00000658030.1
ENST00000659789.1
ENST00000660784.1
ENST00000662016.1
ENST00000662054.1
ENST00000664163.1
CDS TCA 90 bp CTATTGGCCACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCACCACACCTG +
Preference number: 5 (lower is better)
Translates to: LLATGIMEGGRIMCF*MCRSLSSNGIAPHL
Trigger: CAGGTGTGGTGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462928.5
ENST00000489012.5
ENST00000655980.1
ENST00000668425.1
CDS TCA 90 bp CTATTGGCCACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCACCACACCTC +
Preference number: 5 (lower is better)
Translates to: LLATGIMEGGRIMCF*MCRSLSSNGIAPHL
Trigger: GAGGTGTGGTGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 25 transcripts:
ENST00000474168.6
ENST00000488173.6
ENST00000488287.2
ENST00000493473.2
ENST00000494897.5
ENST00000654609.1
ENST00000654755.1
ENST00000655228.1
ENST00000655719.1
ENST00000658280.1
ENST00000659789.1
ENST00000659796.1
ENST00000660784.1
ENST00000660789.1
ENST00000661439.1
ENST00000663627.1
ENST00000664163.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000670024.1
ENST00000670179.1
ENST00000670655.1
CDS TCA 90 bp GGAATTGCACCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: GIAPHSWLPCSRWIC*IPLLAIQLVNASVY
Trigger: ATAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGGTGCAATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000492553.6
ENST00000653088.1
ENST00000655584.1
ENST00000655806.1
ENST00000656281.1
ENST00000656322.1
ENST00000657261.1
ENST00000658030.1
ENST00000659031.1
ENST00000662016.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000666364.1
ENST00000666445.1
ENST00000667319.1
ENST00000667576.1
CDS TCA 90 bp CTATTGGCCACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCACCACACTCC +
Preference number: 5 (lower is better)
Translates to: LLATGIMEGGRIMCF*MCRSLSSNGIAPHS
Trigger: GGAGTGTGGTGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000492553.6
ENST00000653088.1
ENST00000655584.1
ENST00000655806.1
ENST00000656281.1
ENST00000656322.1
ENST00000657261.1
ENST00000658030.1
ENST00000659031.1
ENST00000662016.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000666364.1
ENST00000666445.1
ENST00000667319.1
ENST00000667576.1
CDS TCA 90 bp CTTCCCTTACTTTTCCCCAAACAAATGAAGATTCTCTGTCCCTGCTaGACTGCCTGGAACTGTGGGAGAGTTGATATAAGCAATCCTATG +
Preference number: 5 (lower is better)
Translates to: LPLLFPKQMKILCPC*TAWNCGRVDISNPM
Trigger: CATAGGATTGCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTCATTTGTTTGGGGAAAAGTAAGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 90 bp ATGCCGTCTACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: MPSTYSWLPCSRWIC*IPLLAIQLVNASVY
Trigger: ATAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTAGACGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671181.1
CDS GCA 90 bp CTTTCAGAGGTTCTTTATACATCTTCTTCCTTCATCATCTTCATCTaGAAGGCCAAGGCTGGTCCATTAGCACCCCTTCTCATACTAGTG +
Preference number: 5 (lower is better)
Translates to: LSEVLYTSSSFIIFI*KAKAGPLAPLLILV
Trigger: CACTAGTATGAGAAGGGGTGCTAATGGACCAGCCTTGGCCTTGCAGATGAAGATGATGAAGGAAGAAGATGTATAAAGAACCTCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000470546.5
ENST00000488287.2
ENST00000654609.1
ENST00000655980.1
ENST00000657261.1
ENST00000658280.1
ENST00000659031.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663767.1
ENST00000666234.1
ENST00000666364.1
ENST00000666445.1
ENST00000668405.1
ENST00000668425.1
ENST00000670024.1
CDS CCA 90 bp TCAACAGCATTCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: STAFHCLQKPLAKQR*LGEIENPPRAEAAF
Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGAATGCTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000470546.5
ENST00000654609.1
ENST00000655980.1
ENST00000658280.1
ENST00000661439.1
ENST00000661702.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000666234.1
ENST00000666445.1
ENST00000667319.1
ENST00000670024.1
CDS TCA 90 bp TATAAGGTGGGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTTTTGACAATATTT +
Preference number: 5 (lower is better)
Translates to: YKVGGSLECGKQKLL*AKITPLHSILLTIF
Trigger: AAATATTGTCAAAAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCCCACCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489012.5
CDS CCA 90 bp TGTGATCATGGGTCAGGCAAAAGTTTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTAGATCTCTTT +
Preference number: 5 (lower is better)
Translates to: CDHGSGKSFYWPLES*KGEESCASECVDLF
Trigger: AAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAAACTTTTGCCTGACCCATGATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489012.5
ENST00000658030.1
CDS CCA 90 bp ATCTTCATTATCCACTGTCTTCAGAAACCTTTAGCGAAACAGAGATaGCTGGGAGAAATTGAAAATCCACCAAGAGCTGAGGCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: IFIIHCLQKPLAKQR*LGEIENPPRAEAAF
Trigger: AAAAGCTGCCTCAGCTCTTGGTGGATTTTCAATTTCTCCCAGCCATCTCTGTTTCGCTAAAGGTTTCTGAAGACAGTGGATAATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000657422.1
ENST00000659266.1
ENST00000660789.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
CDS GCA 90 bp CATAACTTATACCAGGGAAAGGTCATAATGAAGGTGTCTCAGCATTaGCGTATGGTTAAATTGACCCCATTGTCATTCCATGCTCATAAG +
Preference number: 5 (lower is better)
Translates to: HNLYQGKVIMKVSQH*RMVKLTPLSFHAHK
Trigger: CTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACACCTTCATTATGACCTTTCCCTGGTATAAGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000654609.1
ENST00000655228.1
ENST00000657422.1
ENST00000658280.1
ENST00000659266.1
ENST00000660789.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000668425.1
ENST00000670655.1
CDS CCA 90 bp CACAATTACCTTAATGTCATTCTGTCCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTAGATCTCTTT +
Preference number: 5 (lower is better)
Translates to: HNYLNVILSYWPLES*KGEESCASECVDLF
Trigger: AAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGACAGAATGACATTAAGGTAATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488173.6
CDS CCA 90 bp GCATACCTTGTAGTTAGTGAAGTTATCTACCTAAATATTGGCCAATaGAATATGAGCAGTAGTGCTGTACACAGTTATCAGGATGAGCAC +
Preference number: 5 (lower is better)
Translates to: AYLVVSEVIYLNIGQ*NMSSSAVHSYQDEH
Trigger: GTGCTCATCCTGATAACTGTGTACAGCACTACTGCTCATATTCCATTGGCCAATATTTAGGTAGATAACTTCACTAACTACAAGGTATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000493473.2
ENST00000653088.1
ENST00000654755.1
ENST00000655719.1
ENST00000656281.1
ENST00000659796.1
CDS CCA 90 bp GATGTACCATCAACATGGCCTTCGGTAATATCAAAGATATTTATCTaGATTACCAGACAGAGACTCTTCTCTTCCCTTACTTTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: DVPSTWPSVISKIFI*ITRQRLFSSLTFPQ
Trigger: TTGGGGAAAAGTAAGGGAAGAGAAGAGTCTCTGTCTGGTAATCCAGATAAATATCTTTGATATTACCGAAGGCCATGTTGATGGTACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 90 bp TTTATTGTAGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: FIVVCSWLPCSRWIC*IPLLAIQLVNASVY
Trigger: ATAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACTACAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000657422.1
ENST00000659266.1
ENST00000664365.1
CDS GCA 90 bp CTTTATTGTAGTTTGTCCCAATGCACAGCCTATGGAGAAAAACCATaGATGTTGGCAAAGAATCAAATTACAAGGCCAAGATATGACATA +
Preference number: 5 (lower is better)
Translates to: LYCSLSQCTAYGEKP*MLAKNQITRPRYDI
Trigger: TATGTCATATCTTGGCCTTGTAATTTGATTCTTTGCCAACATGCATGGTTTTTCTCCATAGGCTGTGCATTGGGACAAACTACAATAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000474168.6
ENST00000655584.1
ENST00000660784.1
CDS TCA 90 bp CTTTCAGATTTTATCAGTCAGGTAAAGCTAAGGAATTCCGTTGTGTaGCATAACATTTCTGAAACATCCCAAGACACTTCTCTTTTCATC +
Preference number: 5 (lower is better)
Translates to: LSDFISQVKLRNSVV*HNISETSQDTSLFI
Trigger: GATGAAAAGAGAAGTGTCTTGGGATGTTTCAGAAATGTTATGTCACACAACGGAATTCCTTAGCTTTACCTGACTGATAAAATCTGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671181.1
CDS TCA 72 bp ACTGTGAGCTGTACTACCCTAGGGTTCAGGGAGGGGTaGTGCAGGCACTCCTTTGGTCGCTCCAGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: TVSCTTLGFREG*CRHSFGRSSWC
Trigger: ACACCAGCTGGAGCGACCAAAGGAGTGCCTGCATCACCCCTCCCTGAACCCTAGGGTAGTACAGCTCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS TCA 72 bp GCTGTCTTGCTGATTGTAGAGCCCCGGGACCTTGAGTaGACACAGGCAGTACCAGGGAGTGGTTACAGCAGG +
Preference number: 6 (lower is better)
Translates to: AVLLIVEPRDLE*TQAVPGSGYSR
Trigger: CCTGCTGTAACCACTCCCTGGTACTGCCTGTGTTCACTCAAGGTCCCGGGGCTCTACAATCAGCAAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000655719.1
ENST00000655806.1
ENST00000662054.1
ENST00000664163.1
CDS CCA 72 bp CCTAGGGTTCAGGGAGGGGTGATGCAGGCACTCCTTTaGTCGCTCCAGCTGGTGTCTCACTATGTTGTGTGT +
Preference number: 6 (lower is better)
Translates to: PRVQGGVMQALL*SLQLVSHYVVC
Trigger: ACACACAACATAGTGAGACACCAGCTGGAGCGACCAAAGGAGTGCCTGCATCACCCCTCCCTGAACCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS TCA 72 bp CTCCTTTTGCTGATTGTAGAGCCCCGGGACCTTGAGTaGACACAGGCAGTACCAGGGAGTGGTTACAGCAGG +
Preference number: 6 (lower is better)
Translates to: LLLLIVEPRDLE*TQAVPGSGYSR
Trigger: CCTGCTGTAACCACTCCCTGGTACTGCCTGTGTTCACTCAAGGTCCCGGGGCTCTACAATCAGCAAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662016.1
CDS CCA 72 bp CCCTCAAGCACACAGATTCTCTCTCTGCACCTCTGCTaGGGCATGGGAAGTGGTGGTGAAGGCAATTCAAGC +
Preference number: 6 (lower is better)
Translates to: PSSTQILSLHLC*GMGSGGEGNSS
Trigger: GCTTGAATTGCCTTCACCACCACTTCCCATGCCCCAGCAGAGGTGCAGAGAGAGAATCTGTGTGCTTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS CAA 90 bp AACCGCCGATGCCACCTCTTTCCCACTCCCAGCAACAGCAGCATGTaGCAGGGATCATCTCTGGTTGCTAGGCGAAGTAGAACACAGCAA +
Preference number: 6 (lower is better)
Translates to: NRRCHLFPTPSNSSM*QGSSLVARRSRTQQ
Trigger: TTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAAAGAGGTGGCATCGGCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000654755.1
ENST00000655719.1
ENST00000655806.1
ENST00000658280.1
ENST00000659789.1
ENST00000659796.1
ENST00000662016.1
ENST00000662054.1
ENST00000664163.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS CAA 90 bp TCAGCCAAGCCTTATGTCCTCCCTTTCAGTACAGTGAGCTTCTACTaGGGCCAGGGTATGTCCAGAAATGGCATCCAGGAGCCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: SAKPYVLPFSTVSFY*GQGMSRNGIQEPAP
Trigger: AGGCGCTGGCTCCTGGATGCCATTTCTGGACATACCCTGGCCCAAGTAGAAGCTCACTGTACTGAAAGGGAGGACATAAGGCTTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp CAATGCTGTCTTGCTGATTGTAGAGCCCCGGGACCTTaGGTGAACACAGGCAGTACCAGGGAGTGGTTACAG +
Preference number: 6 (lower is better)
Translates to: QCCLADCRAPGP*VNTGSTREWLQ
Trigger: CTGTAACCACTCCCTGGTACTGCCTGTGTTCACTCAAGGTCCCGGGGCTCTACAATCAGCAAGACAGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000655719.1
ENST00000655806.1
ENST00000662054.1
ENST00000664163.1
CDS GCA 72 bp CTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATTaGCACTACTGCCTCAGACCCACAGCAAGTACTGCC +
Preference number: 6 (lower is better)
Translates to: LSFTQAGGVSPH*HYCLRPTASTA
Trigger: GGCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 72 bp ACACAGGCAGTACCAGGGAGTGGTTACAGCAGGCCTTaGGTGAGACACAGAGCTATGTTGGCTTCATCTCTG +
Preference number: 6 (lower is better)
Translates to: TQAVPGSGYSRP*VRHRAMLASSL
Trigger: CAGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGTACTGCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655719.1
ENST00000664163.1
CDS CAA 72 bp CACTCCTTTGGTCGCTCCAGCTGGTGTCTCACTATGTaGTGTGTAACCCAAGTCCACCGGTTCCAAGCACAG +
Preference number: 6 (lower is better)
Translates to: HSFGRSSWCLTM*CVTQVHRFQAQ
Trigger: CTGTGCTTGGAACCGGTGGACTTGGGTTACACACAACATAGTGAGACACCAGCTGGAGCGACCAAAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS CAA 72 bp TGCCACCTCTTTCCCACTCCCAGCAACAGCAGCATGTaGCAGGGATCATCTCTGGTTGCTAGGCGAAGTAGA +
Preference number: 6 (lower is better)
Translates to: CHLFPTPSNSSM*QGSSLVARRSR
Trigger: TCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAAAGAGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000654755.1
ENST00000655719.1
ENST00000655806.1
ENST00000658280.1
ENST00000659789.1
ENST00000659796.1
ENST00000662016.1
ENST00000662054.1
ENST00000664163.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS GCA 72 bp CTGGATATCTCCCTTAAGTGTAGTGGGTTCCCCACTTaGCCACAGCTAAGTCTAGAGATGCTGTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LDISLKCSGFPT*PQLSLEMLSRS
Trigger: GCTCCTGGACAGCATCTCTAGACTTAGCTGTGGGCAAGTGGGGAACCCACTACACTTAAGGGAGATATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 72 bp GCACACAGATTCTCTCTCTGCACCTCTGCTGGGGCATaGGAAGTGGTGGTGAAGGCAATTCAAGCTTGTCTT +
Preference number: 6 (lower is better)
Translates to: AHRFSLCTSAGA*EVVVKAIQACL
Trigger: AAGACAAGCTTGAATTGCCTTCACCACCACTTCCCATGCCCCAGCAGAGGTGCAGAGAGAGAATCTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS CCA 72 bp GACTTTCTGACTTCAGGTTACCAGCTGTGGTGGTTATaGGGCAAAACTCCTTCCATGTCCTGCGGGACCTCA +
Preference number: 6 (lower is better)
Translates to: DFLTSGYQLWWL*GKTPSMSCGTS
Trigger: TGAGGTCCCGCAGGACATGGAAGGAGTTTTGCCCCATAACCACCACAGCTGGTAACCTGAAGTCAGAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659796.1
CDS CAA 72 bp CCATGTCTCACAGGGTGGCAGACAAGAGAAGAGGGCTaGTGCAGGGAAACTCCCACTGTCTTCAGAAACCTT +
Preference number: 6 (lower is better)
Translates to: PCLTGWQTREEG*CRETPTVFRNL
Trigger: AAGGTTTCTGAAGACAGTGGGAGTTTCCCTGCACAAGCCCTCTTCTCTTGTCTGCCACCCTGTGAGACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000655228.1
ENST00000670655.1
CDS CAA 72 bp GGTTACAGCAGGCCTTGGGTGAGACACAGAGCTATGTaGGCTTCATCTCTGACCCAGTGCAGTCATAGTGGT +
Preference number: 6 (lower is better)
Translates to: GYSRPWVRHRAM*ASSLTQCSHSG
Trigger: ACCACTATGACTGCACTGGGTCAGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654755.1
ENST00000659789.1
ENST00000671181.1
CDS CAA 72 bp TCTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATaGCCACTACTGCCTCAGACCCACAGCAAGTACTGC +
Preference number: 6 (lower is better)
Translates to: SILYSSRRSLSP*PLLPQTHSKYC
Trigger: GCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 72 bp AACACAGGCAGTACCAGGGAGTGGTTACAGCAGGCCTaGGGTGAGACACAGAGCTATGTTGGCTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: NTGSTREWLQQA*GETQSYVGFIS
Trigger: AGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGTACTGCCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000655719.1
ENST00000662054.1
ENST00000664163.1
CDS CAA 72 bp CTTCATTATCTTGCCCCCAACAGGCCCTGGTGTGTGTaGCTCCCCTCTCTGTGTCCGTGTGTTCTCAATGTT +
Preference number: 6 (lower is better)
Translates to: LHYLAPNRPWCV*LPSLCPCVLNV
Trigger: AACATTGAGAACACACGGACACAGAGAGGGGAGCAACACACACCAGGGCCTGTTGGGGGCAAGATAATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000668405.1
CDS CAA 90 bp TCACTCTTTTCTATCCTTTACTCAAGCAGGAGGAGTCTCTCCCCATaGCCACTACTGCCTCAGACCCACAGCAAGTACTGCCTGGCTACC +
Preference number: 6 (lower is better)
Translates to: SLFSILYSSRRSLSP*PLLPQTHSKYCLAT
Trigger: GGTAGCCAGGCAGTACTTGCTGTGGGTCTGAGGCAGTAGTGGCAATGGGGAGAGACTCCTCCTGCTTGAGTAAAGGATAGAAAAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 90 bp GCATCCAGGAGCCAGCGCCTGAAATTAGGAGCCTTTAGTATTCTCTaGGTGCTCTATTCTATTGCAGCTGAGCTGGTGCCCGAGCCACAA +
Preference number: 6 (lower is better)
Translates to: ASRSQRLKLGAFSIL*VLYSIAAELVPEPQ
Trigger: TTGTGGCTCGGGCACCAGCTCAGCTGCAATAGAATAGAGCACCAAGAGAATACTAAAGGCTCCTAATTTCAGGCGCTGGCTCCTGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp CTCAGGAGCACACTTTGTTCTCCAACTCACTGTGGCTaGGCTGGTTCTCAAGCTGCAAGACAAAGTCCCCTT +
Preference number: 6 (lower is better)
Translates to: LRSTLCSPTHCG*AGSQAARQSPL
Trigger: AAGGGGACTTTGTCTTGCAGCTTGAGAACCAGCTCAGCCACAGTGAGTTGGAGAACAAAGTGTGCTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 72 bp AATCATGGTGGAAGGCAAAAGCCATGTCTCACAGGGTaGCAGACAAGAGAAGAGGGCTTGTGCAGGGAAACT +
Preference number: 6 (lower is better)
Translates to: NHGGRQKPCLTG*QTREEGLCRET
Trigger: AGTTTCCCTGCACAAGCCCTCTTCTCTTGTCTGCCACCCTGTGAGACATGGCTTTTGCCTTCCACCATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000655228.1
ENST00000670655.1
CDS CCA 72 bp ATTCAATGCTGTCCAGGGAGTGGTTACAGCAGGCCTTaGGTGAGACACAGAGCTATGTTGGCTTCATCTCTG +
Preference number: 6 (lower is better)
Translates to: IQCCPGSGYSRP*VRHRAMLASSL
Trigger: CAGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGACAGCATTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000654755.1
ENST00000659789.1
ENST00000671181.1
CDS CCA 72 bp CTCCCAGCAACAGCAGCATGTTGCAGGGATCATCTCTaGTTGCTAGGCGAAGTAGAACACAGCAATTGTGAG +
Preference number: 6 (lower is better)
Translates to: LPATAACCRDHL*LLGEVEHSNCE
Trigger: CTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000654755.1
ENST00000655719.1
ENST00000655806.1
ENST00000658280.1
ENST00000659789.1
ENST00000659796.1
ENST00000662016.1
ENST00000662054.1
ENST00000664163.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS CCA 72 bp GACTGCAATAAGTTAGAGCCAAAGCCAACACAGCACTaGGTCTCACCCAAGACATGGCAACCACTTTCTGGC +
Preference number: 6 (lower is better)
Translates to: DCNKLEPKPTQH*VSPKTWQPLSG
Trigger: GCCAGAAAGTGGTTGCCATGTCTTGGGTGAGACCCAGTGCTGTGTTGGCTTTGGCTCTAACTTATTGCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 72 bp GTTGAAAGAGGCACTGAAGAGATAGAAAACTCAGTCTaGAACCGCCGATGCCACCTCTTTCCCACTCCCAGC +
Preference number: 6 (lower is better)
Translates to: VERGTEEIENSV*NRRCHLFPTPS
Trigger: GCTGGGAGTGGGAAAGAGGTGGCATCGGCGGTTCAAGACTGAGTTTTCTATCTCTTCAGTGCCTCTTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 27 transcripts:
ENST00000488173.6
ENST00000492553.6
ENST00000493473.2
ENST00000653088.1
ENST00000654609.1
ENST00000654755.1
ENST00000655719.1
ENST00000655806.1
ENST00000656322.1
ENST00000657422.1
ENST00000658030.1
ENST00000658280.1
ENST00000659266.1
ENST00000659789.1
ENST00000659796.1
ENST00000660784.1
ENST00000661702.1
ENST00000662016.1
ENST00000662054.1
ENST00000663627.1
ENST00000663767.1
ENST00000664163.1
ENST00000664365.1
ENST00000664909.1
ENST00000667319.1
ENST00000668405.1
ENST00000671181.1
CDS CAA 72 bp CCAGCAACAGCAGCATGTTGCAGGGATCATCTCTGGTaGCTAGGCGAAGTAGAACACAGCAATTGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: PATAACCRDHLW*LGEVEHSNCEA
Trigger: AGCCTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000654755.1
ENST00000655719.1
ENST00000655806.1
ENST00000658280.1
ENST00000659789.1
ENST00000659796.1
ENST00000662016.1
ENST00000662054.1
ENST00000664163.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS CAA 90 bp TTCCCACTCCCAGCAACAGCAGCATGTTGCAGGGATCATCTCTGGTaGCTAGGCGAAGTAGAACACAGCAATTGTGAGGCTCTGAATTCA +
Preference number: 6 (lower is better)
Translates to: FPLPATAACCRDHLW*LGEVEHSNCEALNS
Trigger: TGAATTCAGAGCCTCACAATTGCTGTGTTCTACTTCGCCTAGCAACCAGAGATGATCCCTGCAACATGCTGCTGTTGCTGGGAGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000654755.1
ENST00000655719.1
ENST00000655806.1
ENST00000658280.1
ENST00000659789.1
ENST00000659796.1
ENST00000662016.1
ENST00000662054.1
ENST00000664163.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS CAA 90 bp ACTTGCCCACAGCTAAGTCTAGAGATGCTGTCCAGGAGCCACAAATaGGTGGTGATCTCAGGAGCACACTTTGTTCTCCAACTCACTGTG +
Preference number: 6 (lower is better)
Translates to: TCPQLSLEMLSRSHK*VVISGAHFVLQLTV
Trigger: CACAGTGAGTTGGAGAACAAAGTGTGCTCCTGAGATCACCACCAATTTGTGGCTCCTGGACAGCATCTCTAGACTTAGCTGTGGGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp GCCTCAGACCCACAGCAAGTACTGCCTGGCTACCATTaGTGTTCATTTAAGGGCCAAGCCATTTTCAGTCAG +
Preference number: 6 (lower is better)
Translates to: ASDPQQVLPGYH*CSFKGQAIFSQ
Trigger: CTGACTGAAAATGGCTTGGCCCTTAAATGAACATCAATGGTAGCCAGGCAGTACTTGCTGTGGGTCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp CTGTCCCTGCTGAACTGCCTGGAACTGTGGGAGAGTTaGTATAAGCAATCCTATGGTCATAACCACTGCGAC +
Preference number: 6 (lower is better)
Translates to: LSLLNCLELWES*YKQSYGHNHCD
Trigger: GTCGCAGTGGTTATGACCATAGGATTGCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 72 bp AATTGTGAGGCTCTGAATTCAATGCTGTCCAGGGAGTaGTTACAGCAGGCCTTGGGTGAGACACAGAGCTAT +
Preference number: 6 (lower is better)
Translates to: NCEALNSMLSRE*LQQALGETQSY
Trigger: ATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGACAGCATTGAATTCAGAGCCTCACAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000654755.1
ENST00000658280.1
ENST00000659789.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS CCA 72 bp GCACTGGGTCTCACCCAAGACATGGCAACCACTTTCTaGCTACTGCTTATGTTCACTCAAGGCTCAAGTGTT +
Preference number: 6 (lower is better)
Translates to: ALGLTQDMATTF*LLLMFTQGSSV
Trigger: AACACTTGAGCCTTGAGTGAACATAAGCAGTAGCCAGAAAGTGGTTGCCATGTCTTGGGTGAGACCCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 72 bp AATTCAATGCTGTCCAGGGAGTGGTTACAGCAGGCCTaGGGTGAGACACAGAGCTATGTTGGCTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: NSMLSREWLQQA*GETQSYVGFIS
Trigger: AGAGATGAAGCCAACATAGCTCTGTGTCTCACCCAAGGCCTGCTGTAACCACTCCCTGGACAGCATTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000654755.1
ENST00000658280.1
ENST00000659789.1
ENST00000664909.1
ENST00000668405.1
ENST00000671181.1
CDS CAA 72 bp AGCCAGCGCCTGAAATTAGGAGCCTTTAGTATTCTCTaGGTGCTCTATTCTATTGCAGCTGAGCTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: SQRLKLGAFSIL*VLYSIAAELVP
Trigger: GGGCACCAGCTCAGCTGCAATAGAATAGAGCACCAAGAGAATACTAAAGGCTCCTAATTTCAGGCGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp GGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTATTG +
Preference number: 6 (lower is better)
Translates to: GGSLECGKQKLL*AKITPLHSILL
Trigger: CAATAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000462928.5
ENST00000654609.1
ENST00000660789.1
ENST00000662016.1
ENST00000663627.1
ENST00000666445.1
CDS TCA 72 bp GGAGGATCGCTTGAATGTGGGAAGCAGAAGTTGTTGTaGGCCAAGATCACGCCACTACACTCCATTCTTTTG +
Preference number: 6 (lower is better)
Translates to: GGSLECGKQKLL*AKITPLHSILL
Trigger: CAAAAGAATGGAGTGTAGTGGCGTGATCTTGGCTCACAACAACTTCTGCTTCCCACATTCAAGCGATCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489012.5
CDS TCA 72 bp TGGTATTCAAGGCTCAAGGGTTATTTAGGCAGCAGGTaGTGTATCCTGCCAGACCTGGGTCCTTCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: WYSRLKGYLGSR*CILPDLGPSLQ
Trigger: TTGAAGAGAAGGACCCAGGTCTGGCAGGATACATCACCTGCTGCCTAAATAACCCTTGAGCCTTGAATACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp ATTCAGCCAAGCCTTATGTCCTCCCTTTCAGTACAGTaGGCTTCTACTTGGGCCAGGGTATGTCCAGAAATG +
Preference number: 6 (lower is better)
Translates to: IQPSLMSSLSVQ*ASTWARVCPEM
Trigger: CATTTCTGGACATACCCTGGCCCAAGTAGAAGCTCACTGTACTGAAAGGGAGGACATAAGGCTTGGCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS GCA 72 bp GGGCCAAGCCATTTTCAGTCAGTTTGTTGTAGATGCTaGCACACCTGGATATCTCCCTTAAGTGTAGTGGGT +
Preference number: 6 (lower is better)
Translates to: GPSHFQSVCCRC*HTWISPLSVVG
Trigger: ACCCACTACACTTAAGGGAGATATCCAGGTGTGGCAGCATCTACAACAAACTGACTGAAAATGGCTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS GCA 72 bp CACAGCAATTGTGAGGCTCTGAATTCAATGCTGTCCTaGTATGTGAGGAGACCCAGGTATTCCCAGGTACTA +
Preference number: 6 (lower is better)
Translates to: HSNCEALNSMLS*YVRRPRYSQVL
Trigger: TAGTACCTGGGAATACCTGGGTCTCCTCACATAGCAGGACAGCATTGAATTCAGAGCCTCACAATTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659796.1
ENST00000662016.1
CDS CCA 72 bp CAAGATCACGCCACTACACTCCATTCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: QDHATTLHSIGH*NHGRGKNHVLL
Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAATGGAGTGTAGTGGCGTGATCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000462928.5
ENST00000654609.1
ENST00000660789.1
ENST00000662016.1
ENST00000663627.1
ENST00000666445.1
CDS CCA 72 bp GGGGACTGGCTTTGTCCAGGCCTCAGAAAATATGGATaGCTGGGTCATGTTGTACTCAACTCTACTTGTTCA +
Preference number: 6 (lower is better)
Translates to: GDWLCPGLRKYG*LGHVVLNSTCS
Trigger: TGAACAAGTAGAGTTGAGTACAACATGACCCAGCCATCCATATTTTCTGAGGCCTGGACAAAGCCAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 72 bp CAGCTAAGTCTAGAGATGCTGTCCAGGAGCCACAAATaGGTGGTGATCTCAGGAGCACACTTTGTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: QLSLEMLSRSHK*VVISGAHFVLQ
Trigger: TTGGAGAACAAAGTGTGCTCCTGAGATCACCACCAATTTGTGGCTCCTGGACAGCATCTCTAGACTTAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp CATAAATCTTCCACCACGTGGCTGTGCTGGAGTATTTaGGCCTACTCTGGCTTGGAAGACTGCTTGATTCAT +
Preference number: 6 (lower is better)
Translates to: HKSSTTWLCWSI*AYSGLEDCLIH
Trigger: ATGAATCAAGCAGTCTTCCAAGCCAGAGTAGGCTCAAATACTCCAGCACAGCCACGTGGTGGAAGATTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000470546.5
ENST00000654609.1
ENST00000655980.1
ENST00000658280.1
ENST00000661439.1
ENST00000661702.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000666234.1
ENST00000666445.1
ENST00000667319.1
ENST00000670024.1
CDS TCA 72 bp CCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCA +
Preference number: 6 (lower is better)
Translates to: PHSWLPCSRWIC*IPLLAIQLVNA
Trigger: TGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000492553.6
ENST00000653088.1
ENST00000655584.1
ENST00000655806.1
ENST00000656281.1
ENST00000656322.1
ENST00000657261.1
ENST00000658030.1
ENST00000659031.1
ENST00000662016.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000666364.1
ENST00000666445.1
ENST00000667319.1
ENST00000667576.1
CDS GCA 72 bp AGACACAGAGCTATGTTGGCTTCATCTCTGACCCAGTaGAGTCATAGTGGTGATGGCTACAGAGGTGTTTAT +
Preference number: 6 (lower is better)
Translates to: RHRAMLASSLTQ*SHSGDGYRGVY
Trigger: ATAAACACCTCTGTAGCCATCACCACTATGACTGCACTGGGTCAGAGATGAAGCCAACATAGCTCTGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654755.1
ENST00000671181.1
CDS GCA 72 bp GTCTCACCCAAGACATGGCAACCACTTTCTGGCTACTaGTTATGTTCACTCAAGGCTCAAGTGTTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: VSPKTWQPLSGY*LCSLKAQVFFH
Trigger: ATGGAAGAACACTTGAGCCTTGAGTGAACATAAGCAGTAGCCAGAAAGTGGTTGCCATGTCTTGGGTGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CCA 72 bp CGCCACTACACTCCATTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA +
Preference number: 6 (lower is better)
Translates to: RHYTPFYWPLES*KGEESCASECV
Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAATGGAGTGTAGTGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000462928.5
ENST00000654609.1
ENST00000660789.1
ENST00000662016.1
ENST00000663627.1
ENST00000666445.1
CDS CCA 72 bp GTGATCATGGGTCAGGCAAAAGTTTCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: VIMGQAKVSIGH*NHGRGKNHVLL
Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAAACTTTTGCCTGACCCATGATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489012.5
ENST00000658030.1
CDS CAA 72 bp ACCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGC +
Preference number: 6 (lower is better)
Translates to: TTLLAAVLKMDL*NSIVGHSASKC
Trigger: GCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000492553.6
ENST00000653088.1
ENST00000655584.1
ENST00000655806.1
ENST00000656281.1
ENST00000656322.1
ENST00000657261.1
ENST00000658030.1
ENST00000659031.1
ENST00000662016.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000666364.1
ENST00000666445.1
ENST00000667319.1
ENST00000667576.1
CDS TCA 72 bp TTTTGCACCGCTTCTGACTTGGAGAACTATTTTTGGTaGCTTTCCAACATTTCCACGCATGCAGCCAACTCC +
Preference number: 6 (lower is better)
Translates to: FCTASDLENYFW*LSNISTHAANS
Trigger: GGAGTTGGCTGCATGCGTGGAAATGTTGGAAAGTCACCAAAAATAGTTCTCCAAGTCAGAAGCGGTGCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENST00000470546.5
ENST00000489012.5
ENST00000655228.1
ENST00000655980.1
ENST00000657422.1
ENST00000660784.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663767.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000666364.1
ENST00000666445.1
ENST00000667319.1
ENST00000667576.1
ENST00000668405.1
ENST00000668425.1
CDS TCA 72 bp CTTTTCCCCAAACAAATGAAGATTCTCTGTCCCTGCTaGACTGCCTGGAACTGTGGGAGAGTTGATATAAGC +
Preference number: 6 (lower is better)
Translates to: LFPKQMKILCPC*TAWNCGRVDIS
Trigger: GCTTATATCAACTCTCCCACAGTTCCAGGCAGTTCAGCAGGGACAGAGAATCTTCATTTGTTTGGGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp ACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCA +
Preference number: 6 (lower is better)
Translates to: TYSWLPCSRWIC*IPLLAIQLVNA
Trigger: TGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671181.1
CDS CCA 72 bp GGGTCAGGCAAAAGTTTCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA +
Preference number: 6 (lower is better)
Translates to: GSGKSFYWPLES*KGEESCASECV
Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGAAACTTTTGCCTGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489012.5
ENST00000658030.1
CDS CCA 72 bp AGGGCATGGCTTTATTGTAGTTTGTCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RAWLYCSLSIGH*NHGRGKNHVLL
Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGACAAACTACAATAAAGCCATGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENST00000488287.2
ENST00000492553.6
ENST00000494897.5
ENST00000655228.1
ENST00000655806.1
ENST00000655980.1
ENST00000656322.1
ENST00000657261.1
ENST00000658280.1
ENST00000659031.1
ENST00000659789.1
ENST00000661439.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000664163.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000666364.1
ENST00000667319.1
ENST00000667576.1
ENST00000668405.1
ENST00000668425.1
ENST00000670024.1
ENST00000670179.1
ENST00000670655.1
CDS CCA 72 bp TGCCAAAAGGTTCACATGTCTCTGTCACTCCAGGATTaGTCCTCTGGTGCCTTATTTAGTCTGTTTGGTAAG +
Preference number: 6 (lower is better)
Translates to: CQKVHMSLSLQD*SSGALFSLFGK
Trigger: CTTACCAAACAGACTAAATAAGGCACCAGAGGACCAATCCTGGAGTGACAGAGACATGTGAACCTTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 72 bp ATCCAGTCAGGGCATGGCTTTATTGTAGTTTGTCTATaGGCCACTGGAATCATGGAAGGGGGAAGAATCATG +
Preference number: 6 (lower is better)
Translates to: IQSGHGFIVVCL*ATGIMEGGRIM
Trigger: CATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGACAAACTACAATAAAGCCATGCCCTGACTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 28 transcripts:
ENST00000488287.2
ENST00000492553.6
ENST00000494897.5
ENST00000655228.1
ENST00000655806.1
ENST00000655980.1
ENST00000656322.1
ENST00000657261.1
ENST00000658280.1
ENST00000659031.1
ENST00000659789.1
ENST00000661439.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000664163.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000666364.1
ENST00000667319.1
ENST00000667576.1
ENST00000668405.1
ENST00000668425.1
ENST00000670024.1
ENST00000670179.1
ENST00000670655.1
CDS CAA 72 bp ATTGTGTTGGCATCTTCACAGCTGCTCTACTTCTTTTaGGCAGATTCACTGCCTCTTCGCCAAGTCACAATG +
Preference number: 6 (lower is better)
Translates to: IVLASSQLLYFF*ADSLPLRQVTM
Trigger: CATTGTGACTTGGCGAAGAGGCAGTGAATCTGCCAAAAAGAAGTAGAGCAGCTGTGAAGATGCCAACACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000654609.1
ENST00000655228.1
ENST00000657422.1
ENST00000658280.1
ENST00000659266.1
ENST00000660789.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000668425.1
ENST00000670655.1
CDS CAA 72 bp TACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGC +
Preference number: 6 (lower is better)
Translates to: YVLLAAVLKMDL*NSIVGHSASKC
Trigger: GCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671181.1
CDS CAA 90 bp TGGAATTGCACCACACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTA +
Preference number: 6 (lower is better)
Translates to: WNCTTLLAAVLKMDL*NSIVGHSASKCICL
Trigger: TAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTGTGGTGCAATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000492553.6
ENST00000653088.1
ENST00000655584.1
ENST00000655806.1
ENST00000656281.1
ENST00000656322.1
ENST00000657261.1
ENST00000658030.1
ENST00000659031.1
ENST00000662016.1
ENST00000662097.1
ENST00000662504.1
ENST00000663767.1
ENST00000666364.1
ENST00000666445.1
ENST00000667319.1
ENST00000667576.1
CDS CAA 90 bp GAGTACTCAATTGTGTTGGCATCTTCACAGCTGCTCTACTTCTTTTaGGCAGATTCACTGCCTCTTCGCCAAGTCACAATGAGACAGATT +
Preference number: 6 (lower is better)
Translates to: EYSIVLASSQLLYFF*ADSLPLRQVTMRQI
Trigger: AATCTGTCTCATTGTGACTTGGCGAAGAGGCAGTGAATCTGCCAAAAAGAAGTAGAGCAGCTGTGAAGATGCCAACACAATTGAGTACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000654609.1
ENST00000655228.1
ENST00000657422.1
ENST00000658280.1
ENST00000659266.1
ENST00000660789.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000668425.1
ENST00000670655.1
CDS CAA 90 bp AATGCCGTCTACGTACTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTA +
Preference number: 6 (lower is better)
Translates to: NAVYVLLAAVLKMDL*NSIVGHSASKCICL
Trigger: TAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTAGACGGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671181.1
CDS TCA 72 bp CTGCCCTATGATGCTTTCTGCTGTGACAAGCAGCACTaGTTTCCTATGCAAAGTTCCACAATAACTGCAATC +
Preference number: 6 (lower is better)
Translates to: LPYDAFCCDKQH*FPMQSSTITAI
Trigger: GATTGCAGTTATTGTGGAACTTTGCATAGGAAATCAGTGCTGCTTGTCACAGCAGAAAGCATCATAGGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS TCA 72 bp GTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTTaGATTCCATTGTTGGCCATTCAGCTAGTAAATGCA +
Preference number: 6 (lower is better)
Translates to: VCSWLPCSRWIC*IPLLAIQLVNA
Trigger: TGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000657422.1
ENST00000659266.1
ENST00000664365.1
CDS GCA 72 bp TGGATATCCATAAAATGCCGTCTACGTACTCCTGGCTaGCGTGCTCAAGATGGATTTGTTGAATTCCATTGT +
Preference number: 6 (lower is better)
Translates to: WISIKCRLRTPG*RAQDGFVEFHC
Trigger: ACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAGTACGTAGACGGCATTTTATGGATATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671181.1
CDS CCA 72 bp CATCTCTCCTTGTGTCCACCACAGTTTGTAATATTCTaGATAACACCTAAAGCCAGCATCACACTGGATTGG +
Preference number: 6 (lower is better)
Translates to: HLSLCPPQFVIF*ITPKASITLDW
Trigger: CCAATCCAGTGTGATGCTGGCTTTAGGTGTTATCCAGAATATTACAAACTGTGGTGGACACAAGGAGAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 72 bp ATAACGGGTCACCCCAAATCCAGTAACATGTTAGTCTaGCAGAGTGATAGATGTACCATCAACATGGCCTTC +
Preference number: 6 (lower is better)
Translates to: ITGHPKSSNMLV*QSDRCTINMAF
Trigger: GAAGGCCATGTTGATGGTACATCTATCACTCTGCAAGACTAACATGTTACTGGATTTGGGGTGACCCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS CAA 72 bp AGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGC +
Preference number: 6 (lower is better)
Translates to: SLFLAAVLKMDL*NSIVGHSASKC
Trigger: GCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000657422.1
ENST00000659266.1
ENST00000664365.1
CDS GCA 72 bp AGAAAGAGTACTCAATTGTGTTGGCATCTTCACAGCTaGTCTACTTCTTTTTGGCAGATTCACTGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RKSTQLCWHLHS*STSFWQIHCLF
Trigger: GAAGAGGCAGTGAATCTGCCAAAAAGAAGTAGAGCAGCTGTGAAGATGCCAACACAATTGAGTACTCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000654609.1
ENST00000655228.1
ENST00000657422.1
ENST00000658280.1
ENST00000659266.1
ENST00000660789.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000668425.1
ENST00000670655.1
CDS CCA 72 bp AGAGAAGTTCTGATTACCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA +
Preference number: 6 (lower is better)
Translates to: REVLITYWPLES*KGEESCASECV
Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGTAATCAGAACTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000493473.2
ENST00000653088.1
ENST00000654755.1
ENST00000655719.1
ENST00000656281.1
ENST00000659796.1
CDS CCA 72 bp CTTAATGTCATTCTGTCCTATTGGCCACTGGAATCATaGAAGGGGGAAGAATCATGTGCTTCTGAATGTGTA +
Preference number: 6 (lower is better)
Translates to: LNVILSYWPLES*KGEESCASECV
Trigger: TACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGACAGAATGACATTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488173.6
CDS CCA 72 bp ACAATTACCTTAATGTCATTCTGTCCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: TITLMSFCPIGH*NHGRGKNHVLL
Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGACAGAATGACATTAAGGTAATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488173.6
CDS CAA 90 bp TGGCTTTATTGTAGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTaGTTGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGT +
Preference number: 6 (lower is better)
Translates to: WLYCSLFLAAVLKMD*LNSIVGHSASKCIC
Trigger: ACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACTACAATAAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000657422.1
ENST00000659266.1
ENST00000664365.1
CDS CCA 72 bp TTTTTGTCTGTTCCAATTAGAATTCCTATTGGCCACTaGAATCATGGAAGGGGGAAGAATCATGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: FLSVPIRIPIGH*NHGRGKNHVLL
Trigger: CAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGAATTCTAATTGGAACAGACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000474168.6
ENST00000655584.1
ENST00000660784.1
CDS CAA 72 bp GTATTGGGTTTTTGTCTGTTCCAATTAGAATTCCTATaGGCCACTGGAATCATGGAAGGGGGAAGAATCATG +
Preference number: 6 (lower is better)
Translates to: VLGFCLFQLEFL*ATGIMEGGRIM
Trigger: CATGATTCTTCCCCCTTCCATGATTCCAGTGGCCAATAGGAATTCTAATTGGAACAGACAAAAACCCAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000474168.6
ENST00000655584.1
ENST00000660784.1
CDS CAA 72 bp GTGTCTCAGCATTGCCGTATGGTTAAATTGACCCCATaGTCATTCCATGCTCATAAGTGTCCAATAAATTGC +
Preference number: 6 (lower is better)
Translates to: VSQHCRMVKLTP*SFHAHKCPINC
Trigger: GCAATTTATTGGACACTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000654609.1
ENST00000655228.1
ENST00000657422.1
ENST00000658280.1
ENST00000659266.1
ENST00000660789.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000668425.1
ENST00000670655.1
CDS CAA 72 bp ATAATGAAGGTGTCTCAGCATTGCCGTATGGTTAAATaGACCCCATTGTCATTCCATGCTCATAAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: IMKVSQHCRMVK*TPLSFHAHKCP
Trigger: TGGACACTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACACCTTCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000654609.1
ENST00000655228.1
ENST00000657422.1
ENST00000658280.1
ENST00000659266.1
ENST00000660789.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000668425.1
ENST00000670655.1
CDS CAA 90 bp GGAAAGGTCATAATGAAGGTGTCTCAGCATTGCCGTATGGTTAAATaGACCCCATTGTCATTCCATGCTCATAAGTGTCCAATAAATTGC +
Preference number: 6 (lower is better)
Translates to: GKVIMKVSQHCRMVK*TPLSFHAHKCPINC
Trigger: GCAATTTATTGGACACTTATGAGCATGGAATGACAATGGGGTCAATTTAACCATACGGCAATGCTGAGACACCTTCATTATGACCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000654609.1
ENST00000655228.1
ENST00000657422.1
ENST00000658280.1
ENST00000659266.1
ENST00000660789.1
ENST00000661439.1
ENST00000661702.1
ENST00000662504.1
ENST00000663627.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000668405.1
ENST00000668425.1
ENST00000670655.1
CDS CAA 90 bp CTTTATTGTAGTTTGTTCCTGGCTGCCGTGCTCAAGATGGATTTGTaGAATTCCATTGTTGGCCATTCAGCTAGTAAATGCATCTGTTTA +
Preference number: 6 (lower is better)
Translates to: LYCSLFLAAVLKMDL*NSIVGHSASKCICL
Trigger: TAAACAGATGCATTTACTAGCTGAATGGCCAACAATGGAATTCAACAAATCCATCTTGAGCACGGCAGCCAGGAACAAACTACAATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000657422.1
ENST00000659266.1
ENST00000664365.1
CDS TCA 72 bp ACTGGAATCATGGAAGGGGGAAGAATCATGTGCTTCTaGATGTGTAGATCTCTTTCATCTAATGGAATTGCA +
Preference number: 6 (lower is better)
Translates to: TGIMEGGRIMCF*MCRSLSSNGIA
Trigger: TGCAATTCCATTAGATGAAAGAGATCTACACATTCAGAAGCACATGATTCTTCCCCCTTCCATGATTCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 46 transcripts:
ENST00000462928.5
ENST00000474168.6
ENST00000488173.6
ENST00000488287.2
ENST00000489012.5
ENST00000492553.6
ENST00000493473.2
ENST00000494897.5
ENST00000653088.1
ENST00000654609.1
ENST00000654755.1
ENST00000655228.1
ENST00000655584.1
ENST00000655719.1
ENST00000655806.1
ENST00000655980.1
ENST00000656281.1
ENST00000656322.1
ENST00000657261.1
ENST00000658030.1
ENST00000658280.1
ENST00000659031.1
ENST00000659789.1
ENST00000659796.1
ENST00000660784.1
ENST00000660789.1
ENST00000661439.1
ENST00000662016.1
ENST00000662097.1
ENST00000662504.1
ENST00000663627.1
ENST00000663767.1
ENST00000664163.1
ENST00000664909.1
ENST00000665626.1
ENST00000665928.1
ENST00000666234.1
ENST00000666364.1
ENST00000666445.1
ENST00000667319.1
ENST00000667576.1
ENST00000668405.1
ENST00000668425.1
ENST00000670024.1
ENST00000670179.1
ENST00000670655.1
CDS CAA 90 bp CATAGTAAGATTGCCAGCAATCTTACTAATGGGAGCAATATAATTTaGTATCTGGATATCCATAAAATGCCGTCTACGTACTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: HSKIASNLTNGSNII*YLDIHKMPSTYSWL
Trigger: CAGCCAGGAGTACGTAGACGGCATTTTATGGATATCCAGATACAAAATTATATTGCTCCCATTAGTAAGATTGCTGGCAATCTTACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671181.1
CDS CCA 72 bp TCAACATGGCCTTCGGTAATATCAAAGATATTTATCTaGATTACCAGACAGAGACTCTTCTCTTCCCTTACT +
Preference number: 6 (lower is better)
Translates to: STWPSVISKIFI*ITRQRLFSSLT
Trigger: AGTAAGGGAAGAGAAGAGTCTCTGTCTGGTAATCCAGATAAATATCTTTGATATTACCGAAGGCCATGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000654755.1
CDS TCA 72 bp GATTTGTCAAGGAATTGTAGTACTTTTGGCTTAGACTaGCTTTCAAATTTAAGACCCCAGTGCACTTTAGCT +
Preference number: 6 (lower is better)
Translates to: DLSRNCSTFGLD*LSNLRPQCTLA
Trigger: AGCTAAAGTGCACTGGGGTCTTAAATTTGAAAGTCAGTCTAAGCCAAAAGTACTACAATTCCTTGACAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS GCA 72 bp TGGGGGAAGGAAATGTTTCAGTCTTGGCATAATGGTTaGTGTATAGCACTGAATGAATTTTTGTTAAATGTG +
Preference number: 6 (lower is better)
Translates to: WGKEMFQSWHNG*CIALNEFLLNV
Trigger: CACATTTAACAAAAATTCATTCAGTGCTATACAGCAACCATTATGCCAAGACTGAAACATTTCCTTCCCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000660789.1
CDS CCA 72 bp GTAGTTAGTGAAGTTATCTACCTAAATATTGGCCAATaGAATATGAGCAGTAGTGCTGTACACAGTTATCAG +
Preference number: 6 (lower is better)
Translates to: VVSEVIYLNIGQ*NMSSSAVHSYQ
Trigger: CTGATAACTGTGTACAGCACTACTGCTCATATTCCATTGGCCAATATTTAGGTAGATAACTTCACTAACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000493473.2
ENST00000653088.1
ENST00000654755.1
ENST00000655719.1
ENST00000656281.1
ENST00000659796.1
CDS CCA 72 bp AGGTACTGTGAGTGCTTCCCTGATTTTTGGTTGTTGTaGAGATGTTTTCTTATGTGGATAGTTACTCATTTT +
Preference number: 6 (lower is better)
Translates to: RYCECFPDFWLL*RCFLMWIVTHF
Trigger: AAAATGAGTAACTATCCACATAAGAAAACATCTCCACAACAACCAAAAATCAGGGAAGCACTCACAGTACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000488173.6
ENST00000654755.1
CDS CCA 72 bp ATGGTCAATTTTATTCTTTTAGGATCGGACTCAAACTaGGTATATGTATTAGGAACCCACAGAATGCTTCAG +
Preference number: 6 (lower is better)
Translates to: MVNFILLGSDSN*VYVLGTHRMLQ
Trigger: CTGAAGCATTCTGTGGGTTCCTAATACATATACCCAGTTTGAGTCCGATCCTAAAAGAATAAAATTGACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664365.1
ENST00000670179.1
CDS CAA 90 bp TCCTCTTTTTGTGACCTGATGAATACTTTACTGCTTAAACATGTATaGGGTTTTTGTCTGTTCCAATTAGAATTCCTATTGGCCACTGGA +
Preference number: 6 (lower is better)
Translates to: SSFCDLMNTLLLKHV*GFCLFQLEFLLATG
Trigger: TCCAGTGGCCAATAGGAATTCTAATTGGAACAGACAAAAACCCAATACATGTTTAAGCAGTAAAGTATTCATCAGGTCACAAAAAGAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000474168.6
ENST00000655584.1
ENST00000660784.1
CDS CAA 72 bp ATTGCCAGCAATCTTACTAATGGGAGCAATATAATTTaGTATCTGGATATCCATAAAATGCCGTCTACGTAC +
Preference number: 6 (lower is better)
Translates to: IASNLTNGSNII*YLDIHKMPSTY
Trigger: GTACGTAGACGGCATTTTATGGATATCCAGATACAAAATTATATTGCTCCCATTAGTAAGATTGCTGGCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671181.1