Pregenerated sensors for LINC01191 (Homo sapiens)
Ensembl gene IDs: ENSG00000234199Ensembl transcript IDs: ENST00000412690.1, ENST00000656323.1, ENST00000658731.1, ENST00000660948.1, ENST00000663402.1, ENST00000670955.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TTTGATGCATCGGTGTTACGGGAAAGCTCCTTGGCAGCGAGGGCCTaGCTCTTTATCGCCGTGTGTCCCCGCCCCACGTGGGTCCCATGC | + |
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Preference number: 5 (lower is better) Translates to: FDASVLRESSLAARA*LFIAVCPRPTWVPC Trigger: GCATGGGACCCACGTGGGGCGGGGACACACGGCGATAAAGAGCCAGGCCCTCGCTGCCAAGGAGCTTTCCCGTAACACCGATGCATCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412690.1 |
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| CDS CCA 90 bp | CCCAGGGAGCCCGCAGATCCCACCCTCTCCGGTGAGAGAGTTTGGTaGGGAGCACTTCATCCAATGCAGGGAACAGCGTTACTGCGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PREPADPTLSGERVW*GALHPMQGTALLRP Trigger: AGGCCGCAGTAACGCTGTTCCCTGCATTGGATGAAGTGCTCCCCACCAAACTCTCTCACCGGAGAGGGTGGGATCTGCGGGCTCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS CCA 90 bp | CCACCCAGGGAGCCCGCAGATCCCACCCTCTCCGGTGAGAGAGTTTaGTGGGGAGCACTTCATCCAATGCAGGGAACAGCGTTACTGCGG | + |
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Preference number: 5 (lower is better) Translates to: PPREPADPTLSGERV*WGALHPMQGTALLR Trigger: CCGCAGTAACGCTGTTCCCTGCATTGGATGAAGTGCTCCCCACCAAACTCTCTCACCGGAGAGGGTGGGATCTGCGGGCTCCCTGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS CCA 90 bp | AGACAGCCTCTCACTGTGTGGTTATGCAGCTTGACAGGGGCCCGCTaGACCCAAGTTTACTGCCTCTGGCAGGCGGTGGTGATGACGGGG | + |
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Preference number: 5 (lower is better) Translates to: RQPLTVWLCSLTGAR*TQVYCLWQAVVMTG Trigger: CCCCGTCATCACCACCGCCTGCCAGAGGCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS TCA 90 bp | CGAAATCAAGCCACCCAGGGAGCCCGCAGATCCCACCCTCTCCGGTaGGAGAGTTTGGTGGGGAGCACTTCATCCAATGCAGGGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: RNQATQGARRSHPLR*ESLVGSTSSNAGNS Trigger: GCTGTTCCCTGCATTGGATGAAGTGCTCCCCACCAAACTCTCTCACCGGAGAGGGTGGGATCTGCGGGCTCCCTGGGTGGCTTGATTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS GCA 90 bp | CCACCCTCTCCGGTGAGAGAGTTTGGTGGGGAGCACTTCATCCAATaGAGGGAACAGCGTTACTGCGGCCTTCACCTCCCGGCTTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: PPSPVREFGGEHFIQ*REQRYCGLHLPASS Trigger: ACTTGAAGCCGGGAGGTGAAGGCCGCAGTAACGCTGTTCCCTGCATTGGATGAAGTGCTCCCCACCAAACTCTCTCACCGGAGAGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660948.1 ENST00000670955.1 |
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| CDS TCA 90 bp | CAACAGGTCAGCTCGGGGTCCTGCTTCCAACCTCCTCCTCCTAGTTaGAGCCGGTTCTCAGGAGAGAACCTGCCATCCGCAGCTTTACAC | + |
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Preference number: 5 (lower is better) Translates to: QQVSSGSCFQPPPPS*SRFSGENLPSAALH Trigger: GTGTAAAGCTGCGGATGGCAGGTTCTCTCCTGAGAACCGGCTTCAACTAGGAGGAGGAGGTTGGAAGCAGGACCCCGAGCTGACCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS TCA 90 bp | AAACGCCTTTCTCTAGACAGCCTCTCACTGTGTGGTTATGCAGCTTaGCAGGGGCCCGCTGGACCCAAGTTTACTGCCTCTGGCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: KRLSLDSLSLCGYAA*QGPAGPKFTASGRR Trigger: CCGCCTGCCAGAGGCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCTAGAGAAAGGCGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS GCA 90 bp | AGCTCTTGCTGTTTGTGGAGGCAGCTGGACACCCTGGATGCTGGATaGCAGAGAGCACTTCAGAAGGGCTCTGAAGAGGCCAGAAATGGT | + |
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Preference number: 5 (lower is better) Translates to: SSCCLWRQLDTLDAG*QRALQKGSEEARNG Trigger: ACCATTTCTGGCCTCTTCAGAGCCCTTCTGAAGTGCTCTCTGGCATCCAGCATCCAGGGTGTCCAGCTGCCTCCACAAACAGCAAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS GCA 90 bp | CCTGAACAAACGCCTTTCTCTAGACAGCCTCTCACTGTGTGGTTATaGAGCTTGACAGGGGCCCGCTGGACCCAAGTTTACTGCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PEQTPFSRQPLTVWL*SLTGARWTQVYCLW Trigger: CCAGAGGCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCTAGAGAAAGGCGTTTGTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS GCA 90 bp | GGCTCTTGGTTGTGTGACTTGTGTCACCCATTACTGATGAGCTCTTaGTGTTTGTGGAGGCAGCTGGACACCCTGGATGCTGGATGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GSWLCDLCHPLLMSS*CLWRQLDTLDAGCQ Trigger: CTGGCATCCAGCATCCAGGGTGTCCAGCTGCCTCCACAAACAGCAAGAGCTCATCAGTAATGGGTGACACAAGTCACACAACCAAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS CCA 90 bp | TCTGCTCCTGAACAAACGCCTTTCTCTAGACAGCCTCTCACTGTGTaGTTATGCAGCTTGACAGGGGCCCGCTGGACCCAAGTTTACTGC | + |
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Preference number: 5 (lower is better) Translates to: SAPEQTPFSRQPLTV*LCSLTGARWTQVYC Trigger: GCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCTAGAGAAAGGCGTTTGTTCAGGAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS TCA 90 bp | AGCAATCTACATGTCACAGGGGAGGAGCATGAGGTTCAGAGACGCTaGGTAATGTGCCCACAGACTCTCAGCTGGCATAGAAAGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SNLHVTGEEHEVQRR*VMCPQTLSWHRKLG Trigger: CCCCAGCTTTCTATGCCAGCTGAGAGTCTGTGGGCACATTACTCAGCGTCTCTGAACCTCATGCTCCTCCCCTGTGACATGTAGATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412690.1 ENST00000660948.1 ENST00000663402.1 ENST00000670955.1 |
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| CDS CCA 90 bp | TTGTGTGACTTGTGTCACCCATTACTGATGAGCTCTTGCTGTTTGTaGAGGCAGCTGGACACCCTGGATGCTGGATGCCAGAGAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: LCDLCHPLLMSSCCL*RQLDTLDAGCQRAL Trigger: AAGTGCTCTCTGGCATCCAGCATCCAGGGTGTCCAGCTGCCTCCACAAACAGCAAGAGCTCATCAGTAATGGGTGACACAAGTCACACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS GCA 90 bp | GAAATTTTGCCAGAGTCTGTTCGTCTCCATGGAGACCCAAGAATCTaGAAAGCCTCCATCAGCATCCTGGTCCCCAGGCTCAAGTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: EILPESVRLHGDPRI*KASISILVPRLKFK Trigger: CTTGAACTTGAGCCTGGGGACCAGGATGCTGATGGAGGCTTTGCAGATTCTTGGGTCTCCATGGAGACGAACAGACTCTGGCAAAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS CCA 90 bp | ATGGAGAGTAAGGACACCTGTGGTGGATTTATAGCAAGAAGTGCTTaGAGCCAAACACAGCATCAGCCAGTCAGAGCTAGTGGGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: MESKDTCGGFIARSA*SQTQHQPVRASGAA Trigger: AGCTGCCCCACTAGCTCTGACTGGCTGATGCTGTGTTTGGCTCCAAGCACTTCTTGCTATAAATCCACCACAGGTGTCCTTACTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658731.1 ENST00000663402.1 |
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| CDS CCA 90 bp | CCTTTCTCCCAAGAAGGAAATTTTGCCAGAGTCTGTTCGTCTCCATaGAGACCCAAGAATCTGCAAAGCCTCCATCAGCATCCTGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: PFSQEGNFARVCSSP*RPKNLQSLHQHPGP Trigger: GGGACCAGGATGCTGATGGAGGCTTTGCAGATTCTTGGGTCTCCATGGAGACGAACAGACTCTGGCAAAATTTCCTTCTTGGGAGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS GCA 90 bp | CACATCTGTGTGTTCCTGGAGAGTAAAAGCAACTCAAACTGGACCTaGAGCAGTCTTCAGACACTCTGTGGCTGGGGAATTGCAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: HICVFLESKSNSNWT*SSLQTLCGWGIAVK Trigger: CTTCACTGCAATTCCCCAGCCACAGAGTGTCTGAAGACTGCTGCAGGTCCAGTTTGAGTTGCTTTTACTCTCCAGGAACACACAGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS TCA 90 bp | CTCTTCCTTTCTTCCTCTGCCTCCTCGAATATGCACAGTTTACTATaGCATGCGTGTTACCGTTGCAACGCTCTGCTCCTGAACAAACGC | + |
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Preference number: 5 (lower is better) Translates to: LFLSSSASSNMHSLL*HACYRCNALLLNKR Trigger: GCGTTTGTTCAGGAGCAGAGCGTTGCAACGGTAACACGCATGTCATAGTAAACTGTGCATATTCGAGGAGGCAGAGGAAGAAAGGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS GCA 90 bp | CCTTTCTTCCTCTGCCTCCTCGAATATGCACAGTTTACTATGACATaGGTGTTACCGTTGCAACGCTCTGCTCCTGAACAAACGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PFFLCLLEYAQFTMT*VLPLQRSAPEQTPF Trigger: GAAAGGCGTTTGTTCAGGAGCAGAGCGTTGCAACGGTAACACGCATGTCATAGTAAACTGTGCATATTCGAGGAGGCAGAGGAAGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS CCA 90 bp | CCCATCAGAGCACTTTTCGAAGTGTTTTGTAATTCCTGGTCTGTTTaGCTGTCTTCGCCACCAGCGCCTGTCTGTGGTGTTTACTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: PIRALFEVFCNSWSV*LSSPPAPVCGVYCC Trigger: ACAACAGTAAACACCACAGACAGGCGCTGGTGGCGAAGACAGCCAAACAGACCAGGAATTACAAAACACTTCGAAAAGTGCTCTGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658731.1 ENST00000663402.1 |
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| CDS TCA 90 bp | CTGATGTTTGTATCTGCAGTTGAAAACTTGTCTTCTAGAAACCCATaGACTCTGGCATCCTCACTGCTGCCTGGTAGATGTCACAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: LMFVSAVENLSSRNP*TLASSLLPGRCHSG Trigger: TCCGCTGTGACATCTACCAGGCAGCAGTGAGGATGCCAGAGTTCATGGGTTTCTAGAAGACAAGTTTTCAACTGCAGATACAAACATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663402.1 |
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| CDS TCA 90 bp | CTTTGCATAAGGTGCTATGAACCAGACACATGGCTCTTGGTTGTGTaGCTTGTGTCACCCATTACTGATGAGCTCTTGCTGTTTGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LCIRCYEPDTWLLVV*LVSPITDELLLFVE Trigger: CTCCACAAACAGCAAGAGCTCATCAGTAATGGGTGACACAAGTCACACAACCAAGAGCCATGTGTCTGGTTCATAGCACCTTATGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS CCA 90 bp | AGAGAATCTATACACAGCACTTTTATGAGTCTTGCATTCTCAGGGTaGCCAGAGGAAAGAAAGCAGCCAACACTGCCTTTCTCCCAAGAA | + |
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Preference number: 5 (lower is better) Translates to: RESIHSTFMSLAFSG*PEERKQPTLPFSQE Trigger: TTCTTGGGAGAAAGGCAGTGTTGGCTGCTTTCTTTCCTCTGGCCACCCTGAGAATGCAAGACTCATAAAAGTGCTGTGTATAGATTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS TCA 90 bp | TTCTCAACACTGTCCGGGTGTCTCCTAGCAGATACATTGACGTCCTaGTGTTTGTATCTGCAGTTGAAAACTTGTCTTCTAGAAACCCAT | + |
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Preference number: 5 (lower is better) Translates to: FSTLSGCLLADTLTS*CLYLQLKTCLLETH Trigger: ATGGGTTTCTAGAAGACAAGTTTTCAACTGCAGATACAAACATCAGGACGTCAATGTATCTGCTAGGAGACACCCGGACAGTGTTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412690.1 ENST00000660948.1 ENST00000663402.1 ENST00000670955.1 |
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| CDS TCA 90 bp | AAAATCTGTAATTCCACAATTGCAAATCTCAGAGAATCCTCTCGGTaGTTTATTGGTCACTACATTCGGCACTTGAAGAACAATTTATGC | + |
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Preference number: 5 (lower is better) Translates to: KICNSTIANLRESSR*FIGHYIRHLKNNLC Trigger: GCATAAATTGTTCTTCAAGTGCCGAATGTAGTGACCAATAAATCACCGAGAGGATTCTCTGAGATTTGCAATTGTGGAATTACAGATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS CCA 72 bp | TCGGTGTTACGGGAAAGCTCCTTGGCAGCGAGGGCCTaGCTCTTTATCGCCGTGTGTCCCCGCCCCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: SVLRESSLAARA*LFIAVCPRPTW Trigger: CCACGTGGGGCGGGGACACACGGCGATAAAGAGCCAGGCCCTCGCTGCCAAGGAGCTTTCCCGTAACACCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412690.1 |
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| CDS CCA 72 bp | GCCTGGCTCTTTATCGCCGTGTGTCCCCGCCCCACGTaGGTCCCATGCTTAGCCCACGGCGGGTGTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: AWLFIAVCPRPT*VPCLAHGGCLK Trigger: TTTCAAACACCCGCCGTGGGCTAAGCATGGGACCCACGTGGGGCGGGGACACACGGCGATAAAGAGCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412690.1 |
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| CDS TCA 72 bp | GCCACCCAGGGAGCCCGCAGATCCCACCCTCTCCGGTaGGAGAGTTTGGTGGGGAGCACTTCATCCAATGCA | + |
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Preference number: 6 (lower is better) Translates to: ATQGARRSHPLR*ESLVGSTSSNA Trigger: TGCATTGGATGAAGTGCTCCCCACCAAACTCTCTCACCGGAGAGGGTGGGATCTGCGGGCTCCCTGGGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS GCA 72 bp | TGCAGCTTGACAGGGGCCCGCTGGACCCAAGTTTACTaGCTCTGGCAGGCGGTGGTGATGACGGGGAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: CSLTGARWTQVY*LWQAVVMTGSK Trigger: TTTACTCCCCGTCATCACCACCGCCTGCCAGAGGCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS CAA 72 bp | CCCACGTGGGTCCCATGCTTAGCCCACGGCGGGTGTTaGAAAAGCACGGAATGTATATGGCGGGACAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PTWVPCLAHGGC*KSTECIWRDRA Trigger: CGCCCTGTCCCGCCATATACATTCCGTGCTTTTCAAACACCCGCCGTGGGCTAAGCATGGGACCCACGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412690.1 |
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| CDS CAA 90 bp | CACTGCTGCCTTTTGTTTGATGCATCGGTGTTACGGGAAAGCTCCTaGGCAGCGAGGGCCTGGCTCTTTATCGCCGTGTGTCCCCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: HCCLLFDASVLRESS*AARAWLFIAVCPRP Trigger: GGGGCGGGGACACACGGCGATAAAGAGCCAGGCCCTCGCTGCCAAGGAGCTTTCCCGTAACACCGATGCATCAAACAAAAGGCAGCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412690.1 |
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| CDS TCA 72 bp | AGCTCGGGGTCCTGCTTCCAACCTCCTCCTCCTAGTTaGAGCCGGTTCTCAGGAGAGAACCTGCCATCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSGSCFQPPPPS*SRFSGENLPSA Trigger: TGCGGATGGCAGGTTCTCTCCTGAGAACCGGCTTCAACTAGGAGGAGGAGGTTGGAAGCAGGACCCCGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS GCA 72 bp | CCGGTGAGAGAGTTTGGTGGGGAGCACTTCATCCAATaGAGGGAACAGCGTTACTGCGGCCTTCACCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: PVREFGGEHFIQ*REQRYCGLHLP Trigger: CGGGAGGTGAAGGCCGCAGTAACGCTGTTCCCTGCATTGGATGAAGTGCTCCCCACCAAACTCTCTCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS CAA 90 bp | CAAACGCCTTTCTCTAGACAGCCTCTCACTGTGTGGTTATGCAGCTaGACAGGGGCCCGCTGGACCCAAGTTTACTGCCTCTGGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: QTPFSRQPLTVWLCS*TGARWTQVYCLWQA Trigger: CGCCTGCCAGAGGCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCTAGAGAAAGGCGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS CCA 72 bp | CCCGCAGATCCCACCCTCTCCGGTGAGAGAGTTTGGTaGGGAGCACTTCATCCAATGCAGGGAACAGCGTTA | + |
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Preference number: 6 (lower is better) Translates to: PADPTLSGERVW*GALHPMQGTAL Trigger: TAACGCTGTTCCCTGCATTGGATGAAGTGCTCCCCACCAAACTCTCTCACCGGAGAGGGTGGGATCTGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS GCA 72 bp | GGGGAGCACTTCATCCAATGCAGGGAACAGCGTTACTaGGGCCTTCACCTCCCGGCTTCAAGTGATTCACCT | + |
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Preference number: 6 (lower is better) Translates to: GEHFIQCREQRY*GLHLPASSDSP Trigger: AGGTGAATCACTTGAAGCCGGGAGGTGAAGGCCGCAGTAACGCTGTTCCCTGCATTGGATGAAGTGCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660948.1 ENST00000670955.1 |
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| CDS TCA 72 bp | TCTCTAGACAGCCTCTCACTGTGTGGTTATGCAGCTTaGCAGGGGCCCGCTGGACCCAAGTTTACTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLDSLSLCGYAA*QGPAGPKFTAS Trigger: AGAGGCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS GCA 72 bp | ACGCCTTTCTCTAGACAGCCTCTCACTGTGTGGTTATaGAGCTTGACAGGGGCCCGCTGGACCCAAGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: TPFSRQPLTVWL*SLTGARWTQVY Trigger: GTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCTAGAGAAAGGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS CAA 72 bp | TTCTCTAGACAGCCTCTCACTGTGTGGTTATGCAGCTaGACAGGGGCCCGCTGGACCCAAGTTTACTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSRQPLTVWLCS*TGARWTQVYCL Trigger: GAGGCAGTAAACTTGGGTCCAGCGGGCCCCTGTCAAGCTGCATAACCACACAGTGAGAGGCTGTCTAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS TCA 72 bp | CATGTCACAGGGGAGGAGCATGAGGTTCAGAGACGCTaGGTAATGTGCCCACAGACTCTCAGCTGGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: HVTGEEHEVQRR*VMCPQTLSWHR Trigger: TCTATGCCAGCTGAGAGTCTGTGGGCACATTACTCAGCGTCTCTGAACCTCATGCTCCTCCCCTGTGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412690.1 ENST00000660948.1 ENST00000663402.1 ENST00000670955.1 |
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| CDS TCA 72 bp | ACTCTTCTCCCGTCCCAGGAAGCCTTTCCAGTGTTCTaGTTCCAGAAAGCAGGTGTGTGTGGCCGGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TLLPSQEAFPVF*FQKAGVCGRFK Trigger: CTTGAACCGGCCACACACACCTGCTTTCTGGAATCAGAACACTGGAAAGGCTTCCTGGGACGGGAGAAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656323.1 ENST00000660948.1 ENST00000670955.1 |
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| CDS CCA 72 bp | TTTTGTTTGATGCATCGGTGTTACGGGAAAGCTCCTTaGCAGCGAGGGCCTGGCTCTTTATCGCCGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: FCLMHRCYGKAP*QRGPGSLSPCV Trigger: GACACACGGCGATAAAGAGCCAGGCCCTCGCTGCCAAGGAGCTTTCCCGTAACACCGATGCATCAAACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412690.1 |
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| CDS CCA 72 bp | TTGTGTCACCCATTACTGATGAGCTCTTGCTGTTTGTaGAGGCAGCTGGACACCCTGGATGCTGGATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LCHPLLMSSCCL*RQLDTLDAGCQ Trigger: CTGGCATCCAGCATCCAGGGTGTCCAGCTGCCTCCACAAACAGCAAGAGCTCATCAGTAATGGGTGACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS CAA 72 bp | CTTTTGTTTGATGCATCGGTGTTACGGGAAAGCTCCTaGGCAGCGAGGGCCTGGCTCTTTATCGCCGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LLFDASVLRESS*AARAWLFIAVC Trigger: ACACACGGCGATAAAGAGCCAGGCCCTCGCTGCCAAGGAGCTTTCCCGTAACACCGATGCATCAAACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412690.1 |
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| CDS CAA 90 bp | TGGTTGTGTGACTTGTGTCACCCATTACTGATGAGCTCTTGCTGTTaGTGGAGGCAGCTGGACACCCTGGATGCTGGATGCCAGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: WLCDLCHPLLMSSCC*WRQLDTLDAGCQRA Trigger: TGCTCTCTGGCATCCAGCATCCAGGGTGTCCAGCTGCCTCCACAAACAGCAAGAGCTCATCAGTAATGGGTGACACAAGTCACACAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS TCA 72 bp | GCAGTCTTCAGACACTCTGTGGCTGGGGAATTGCAGTaGAGCTTCAAGGAACTCTCACTCCTCTCCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: AVFRHSVAGELQ*SFKELSLLSWS Trigger: TGACCAGGAGAGGAGTGAGAGTTCCTTGAAGCTTCACTGCAATTCCCCAGCCACAGAGTGTCTGAAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS TCA 72 bp | GCAGTCTTCAGACACTCTGTGGCTGGGGAATTGCAGTaGAGCTTCAAGGAACTCTCACCTGGTAGATGTCAC | + |
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Preference number: 6 (lower is better) Translates to: AVFRHSVAGELQ*SFKELSPGRCH Trigger: GTGACATCTACCAGGTGAGAGTTCCTTGAAGCTTCACTGCAATTCCCCAGCCACAGAGTGTCTGAAGACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS GCA 72 bp | TTGTGTGACTTGTGTCACCCATTACTGATGAGCTCTTaGTGTTTGTGGAGGCAGCTGGACACCCTGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: LCDLCHPLLMSS*CLWRQLDTLDA Trigger: AGCATCCAGGGTGTCCAGCTGCCTCCACAAACAGCAAGAGCTCATCAGTAATGGGTGACACAAGTCACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS TCA 72 bp | TCTTCCTCTGCCTCCTCGAATATGCACAGTTTACTATaGCATGCGTGTTACCGTTGCAACGCTCTGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSASSNMHSLL*HACYRCNALLL Trigger: CAGGAGCAGAGCGTTGCAACGGTAACACGCATGTCATAGTAAACTGTGCATATTCGAGGAGGCAGAGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS GCA 72 bp | GTGTTCCTGGAGAGTAAAAGCAACTCAAACTGGACCTaGAGCAGTCTTCAGACACTCTGTGGCTGGGGAATT | + |
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Preference number: 6 (lower is better) Translates to: VFLESKSNSNWT*SSLQTLCGWGI Trigger: AATTCCCCAGCCACAGAGTGTCTGAAGACTGCTGCAGGTCCAGTTTGAGTTGCTTTTACTCTCCAGGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS GCA 72 bp | CTGCCTGGTAGATGTCACAGCGGAGAATCAACAGAATaGATGGAAGATAGTATGTGGGGCTGGAGCATAGGA | + |
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Preference number: 6 (lower is better) Translates to: LPGRCHSGESTE*MEDSMWGWSIG Trigger: TCCTATGCTCCAGCCCCACATACTATCTTCCATGCATTCTGTTGATTCTCCGCTGTGACATCTACCAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663402.1 |
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| CDS CCA 72 bp | GCACTTTTCGAAGTGTTTTGTAATTCCTGGTCTGTTTaGCTGTCTTCGCCACCAGCGCCTGTCTGTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: ALFEVFCNSWSV*LSSPPAPVCGV Trigger: AACACCACAGACAGGCGCTGGTGGCGAAGACAGCCAAACAGACCAGGAATTACAAAACACTTCGAAAAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658731.1 ENST00000663402.1 |
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| CDS CCA 72 bp | CAGAAGGGCTCTGAAGAGGCCAGAAATGGTACAAAATaGCCCCGTGTCTGCAGAGAATCTATACACAGCACT | + |
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Preference number: 6 (lower is better) Translates to: QKGSEEARNGTK*PRVCRESIHST Trigger: AGTGCTGTGTATAGATTCTCTGCAGACACGGGGCCATTTTGTACCATTTCTGGCCTCTTCAGAGCCCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS TCA 72 bp | AGGTGCTATGAACCAGACACATGGCTCTTGGTTGTGTaGCTTGTGTCACCCATTACTGATGAGCTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RCYEPDTWLLVV*LVSPITDELLL Trigger: CAGCAAGAGCTCATCAGTAATGGGTGACACAAGTCACACAACCAAGAGCCATGTGTCTGGTTCATAGCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS GCA 72 bp | TCACCTGGTAGATGTCACAGCGGAGAATCAACAGAATaGATGGAAGATAGTATGTGGGGCTGGAGCATAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPGRCHSGESTE*MEDSMWGWSIG Trigger: TCCTATGCTCCAGCCCCACATACTATCTTCCATGCATTCTGTTGATTCTCCGCTGTGACATCTACCAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS GCA 72 bp | CTCTGCCTCCTCGAATATGCACAGTTTACTATGACATaGGTGTTACCGTTGCAACGCTCTGCTCCTGAACAA | + |
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Preference number: 6 (lower is better) Translates to: LCLLEYAQFTMT*VLPLQRSAPEQ Trigger: TTGTTCAGGAGCAGAGCGTTGCAACGGTAACACGCATGTCATAGTAAACTGTGCATATTCGAGGAGGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670955.1 |
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| CDS CAA 72 bp | AAGCACTGGTTTCCCTCGAGAGTTTGCAAGGACGTTTaGCAGAGAGGGAGAATCCATGTCCTGGCTCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: KHWFPSRVCKDV*QRGRIHVLALK Trigger: TTTAAGAGCCAGGACATGGATTCTCCCTCTCTGCAAAACGTCCTTGCAAACTCTCGAGGGAAACCAGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS CAA 90 bp | AACAACATGAAGCACTGGTTTCCCTCGAGAGTTTGCAAGGACGTTTaGCAGAGAGGGAGAATCCATGTCCTGGCTCTTAAAATGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: NNMKHWFPSRVCKDV*QRGRIHVLALKMAS Trigger: AGATGCCATTTTAAGAGCCAGGACATGGATTCTCCCTCTCTGCAAAACGTCCTTGCAAACTCTCGAGGGAAACCAGTGCTTCATGTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS TCA 72 bp | CCCGTGTCTGCAGAGAATCTATACACAGCACTTTTATaGGTCTTGCATTCTCAGGGTGGCCAGAGGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PVSAENLYTALL*VLHSQGGQRKE Trigger: TTCTTTCCTCTGGCCACCCTGAGAATGCAAGACTCATAAAAGTGCTGTGTATAGATTCTCTGCAGACACGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS CCA 72 bp | CAAGAAGGAAATTTTGCCAGAGTCTGTTCGTCTCCATaGAGACCCAAGAATCTGCAAAGCCTCCATCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: QEGNFARVCSSP*RPKNLQSLHQH Trigger: ATGCTGATGGAGGCTTTGCAGATTCTTGGGTCTCCATGGAGACGAACAGACTCTGGCAAAATTTCCTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656323.1 ENST00000658731.1 |
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| CDS CAA 72 bp | GCTATGAACCAGACACATGGCTCTTGGTTGTGTGACTaGTGTCACCCATTACTGATGAGCTCTTGCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: AMNQTHGSWLCD*CHPLLMSSCCL Trigger: CAAACAGCAAGAGCTCATCAGTAATGGGTGACACAAGTCACACAACCAAGAGCCATGTGTCTGGTTCATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656323.1 |
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| CDS GCA 72 bp | TTTAACAACATGAAGCACTGGTTTCCCTCGAGAGTTTaGAAGGACGTTTTGCAGAGAGGGAGAATCCATGTC | + |
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Preference number: 6 (lower is better) Translates to: FNNMKHWFPSRV*KDVLQRGRIHV Trigger: GACATGGATTCTCCCTCTCTGCAAAACGTCCTTGCAAACTCTCGAGGGAAACCAGTGCTTCATGTTGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS CCA 72 bp | AGCGGAGAATCAACAGAATGCATGGAAGATAGTATGTaGGGCTGGAGCATAGGAAGAGGAACTCATCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SGESTECMEDSM*GWSIGRGTHPK Trigger: TTTTGGATGAGTTCCTCTTCCTATGCTCCAGCCCCACATACTATCTTCCATGCATTCTGTTGATTCTCCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658731.1 ENST00000663402.1 |
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| CDS TCA 72 bp | CTGTCCGGGTGTCTCCTAGCAGATACATTGACGTCCTaGTGTTTGTATCTGCAGTTGAAAACTTGTCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LSGCLLADTLTS*CLYLQLKTCLL Trigger: TAGAAGACAAGTTTTCAACTGCAGATACAAACATCAGGACGTCAATGTATCTGCTAGGAGACACCCGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412690.1 ENST00000660948.1 ENST00000663402.1 ENST00000670955.1 |
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| CDS TCA 72 bp | ACAATTTATGCCATAACTTGTAAAACTTTAACAACATaGAGCACTGGTTTCCCTCGAGAGTTTGCAAGGACG | + |
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Preference number: 6 (lower is better) Translates to: TIYAITCKTLTT*STGFPREFART Trigger: CGTCCTTGCAAACTCTCGAGGGAAACCAGTGCTTCATGTTGTTAAAGTTTTACAAGTTATGGCATAAATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS CCA 72 bp | AATTGCAAATCTCAGAGAATCCTCTCGGTGATTTATTaGTCACTACATTCGGCACTTGAAGAACAATTTATG | + |
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Preference number: 6 (lower is better) Translates to: NCKSQRILSVIY*SLHSALEEQFM Trigger: CATAAATTGTTCTTCAAGTGCCGAATGTAGTGACCAATAAATCACCGAGAGGATTCTCTGAGATTTGCAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS CAA 72 bp | CATCCAAGACTAGGTACAAAATCTGTAATTCCACAATaGCAAATCTCAGAGAATCCTCTCGGTGATTTATTG | + |
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Preference number: 6 (lower is better) Translates to: HPRLGTKSVIPQ*QISENPLGDLL Trigger: CAATAAATCACCGAGAGGATTCTCTGAGATTTGCAATTGTGGAATTACAGATTTTGTACCTAGTCTTGGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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| CDS TCA 72 bp | CCTCTCGGTGATTTATTGGTCACTACATTCGGCACTTaGAGAACAATTTATGCCATAACTTGTAAAACTTTA | + |
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Preference number: 6 (lower is better) Translates to: PLGDLLVTTFGT*RTIYAITCKTL Trigger: TAAAGTTTTACAAGTTATGGCATAAATTGTTCTTCAAGTGCCGAATGTAGTGACCAATAAATCACCGAGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658731.1 |
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