RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01186 (Homo sapiens)

Ensembl gene IDs: ENSG00000236751

Ensembl transcript IDs: ENST00000446884.2, ENST00000658351.1, ENST00000660228.1, ENST00000668280.1, ENST00000670979.1

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GTGTGCTCTTCCGCCAGTGTGTTCCTCTTGACATCCAGCCACCTGTaGGTTCCTCCACCAATGTGTTCCTCTCGACGTCCAGCGGCTTGT +
Preference number: 5 (lower is better)
Translates to: VCSSASVFLLTSSHL*VPPPMCSSRRPAAC
Trigger: ACAAGCCGCTGGACGTCGAGAGGAACACATTGGTGGAGGAACTCACAGGTGGCTGGATGTCAAGAGGAACACACTGGCGGAAGAGCACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS GCA 90 bp TCCTCCACCAATGTGTTCCTCTCGACGTCCAGCGGCTTGTGTCTCTaGAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: SSTNVFLSTSSGLCL*SSTWLGRPHNHVGK
Trigger: TTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACACAAGCCGCTGGACGTCGAGAGGAACACATTGGTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS CCA 90 bp GTGTCTCTGCAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTaGAAAACAAGGAGGAGCAAGTCACATCTGGCCCAAACAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VSLQFHVAGEASQSC*KTRRSKSHLAQTAA
Trigger: TGCAGCTGTTTGGGCCAGATGTGACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS GCA 90 bp GCCATCCGGTCTATAGGTAAAGAGCAGATGCCTCCCACAGAGCTGTaGTCCACAGAAGAAACAAAGGGGCTCTTCGAAAGGGACATGTCC +
Preference number: 5 (lower is better)
Translates to: AIRSIGKEQMPPTEL*STEETKGLFERDMS
Trigger: GGACATGTCCCTTTCGAAGAGCCCCTTTGTTTCTTCTGTGGAGCACAGCTCTGTGGGAGGCATCTGCTCTTTACCTATAGACCGGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446884.2
CDS CCA 90 bp AGTGCTTTCGGAAGGCATCTTTCCCGTTTTAGAAGGGGTTACTTCTaGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTTGCA +
Preference number: 5 (lower is better)
Translates to: SAFGRHLSRFRRGYF*ILSQLAGFPRSRLA
Trigger: TGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGATGCCTTCCGAAAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000658351.1
ENST00000660228.1
ENST00000670979.1
CDS CCA 90 bp CATCCTTTCGGAAGGCATCTTTCCCGTTTTAGAAGGGGTTACTTCTaGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTTGCA +
Preference number: 5 (lower is better)
Translates to: HPFGRHLSRFRRGYF*ILSQLAGFPRSRLA
Trigger: TGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGATGCCTTCCGAAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 90 bp GTACTCAAACAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTaGAAAACAAGGAGGAGCAAGTCACATCCTTTCGGAAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: VLKQFHVAGEASQSC*KTRRSKSHPFGRHL
Trigger: AAGATGCCTTCCGAAAGGATGTGACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTTTGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS TCA 90 bp GCCACAGACCAGACGAGCCAGTTTACTGGTCTAGGTGATGCCAGTTaGTCCATCAAGTGCAGGGTCTTTGACTCTTCTCAAATCATAACA +
Preference number: 5 (lower is better)
Translates to: ATDQTSQFTGLGDAS*SIKCRVFDSSQIIT
Trigger: TGTTATGATTTGAGAAGAGTCAAAGACCCTGCACTTGATGGATCAACTGGCATCACCTAGACCAGTAAACTGGCTCGTCTGGTCTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS GCA 90 bp CTTACTTCCCTCTTTGTAATTGCCCAATGGGTTCTTCTTGCCCACTaGCCAGCTAGAGCTGACATTCAGACAGGAGAACTGCAATACAGA +
Preference number: 5 (lower is better)
Translates to: LTSLFVIAQWVLLAH*PARADIQTGELQYR
Trigger: TCTGTATTGCAGTTCTCCTGTCTGAATGTCAGCTCTAGCTGGGCAGTGGGCAAGAAGAACCCATTGGGCAATTACAAAGAGGGAAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 90 bp CTATTATGTCAGAAACTCACAAGTACTCAAACAGTTCCACGTGGCTaGGGAGGCCTCACAATCATGTTGGAAAACAAGGAGGAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: LLCQKLTSTQTVPRG*GGLTIMLENKEEQV
Trigger: GACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTTTGAGTACTTGTGAGTTTCTGACATAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 90 bp AAGTGCAGGGTCTTTGACTCTTCTCAAATCATAACAACCAATTTCTaGGCCAGGGCTCCAATCTCTAAAATATCTTCCTGCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: KCRVFDSSQIITTNF*ARAPISKISSCSDL
Trigger: AAGATCAGAGCAGGAAGATATTTTAGAGATTGGAGCCCTGGCCCAGAAATTGGTTGTTATGATTTGAGAAGAGTCAAAGACCCTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS TCA 90 bp ATACAGAAAGAGTTTAATATACTAGAGCTGGCTAAACAGGAAACCTaGGTTTTATTATTACTCAAATCAGCCTCCTCAAAACTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: IQKEFNILELAKQET*VLLLLKSASSKLQR
Trigger: CCTCTGAAGTTTTGAGGAGGCTGATTTGAGTAATAATAAAACTCAGGTTTCCTGTTTAGCCAGCTCTAGTATATTAAACTCTTTCTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 90 bp TGGAGAAATATGATAGGACAAAGAATATTATCTAATGGTAATAAATaGGGCAGGGACTTAACGAGGCCTGTTTGTTTGAATTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: WRNMIGQRILSNGNK*GRDLTRPVCLNFSL
Trigger: CAGAGAAAAATTCAAACAAACAGGCCTCGTTAAGTCCCTGCCCCATTTATTACCATTAGATAATATTCTTTGTCCTATCATATTTCTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000660228.1
CDS GCA 72 bp CTCCTCCGACTGCCCAGGCCAAACTCCACATCGTTCTaGAGGTTGATGGCCTGCCGGCGTGCCCCAGCGTGC +
Preference number: 6 (lower is better)
Translates to: LLRLPRPNSTSF*RLMACRRAPAC
Trigger: GCACGCTGGGGCACGCCGGCAGGCCATCAACCTGCAGAACGATGTGGAGTTTGGCCTGGGCAGTCGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS TCA 72 bp GACTGCCCAGGCCAAACTCCACATCGTTCTGCAGGTTaGTGGCCTGCCGGCGTGCCCCAGCGTGCCGTTGTC +
Preference number: 6 (lower is better)
Translates to: DCPGQTPHRSAG*WPAGVPQRAVV
Trigger: GACAACGGCACGCTGGGGCACGCCGGCAGGCCATCAACCTGCAGAACGATGTGGAGTTTGGCCTGGGCAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS CAA 72 bp CGACTGCCCAGGCCAAACTCCACATCGTTCTGCAGGTaGATGGCCTGCCGGCGTGCCCCAGCGTGCCGTTGT +
Preference number: 6 (lower is better)
Translates to: RLPRPNSTSFCR*MACRRAPACRC
Trigger: ACAACGGCACGCTGGGGCACGCCGGCAGGCCATCAACCTGCAGAACGATGTGGAGTTTGGCCTGGGCAGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS GCA 72 bp CCCCAGCGTGCCGTTGTCTGCTGGTGCTTGTCAGTGTaGTCTTCCGCCAGTGTGTTCCTCTTGACATCCAGC +
Preference number: 6 (lower is better)
Translates to: PQRAVVCWCLSV*SSASVFLLTSS
Trigger: GCTGGATGTCAAGAGGAACACACTGGCGGAAGAGCACACTGACAAGCACCAGCAGACAACGGCACGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS CAA 90 bp CCTGTGAGTTCCTCCACCAATGTGTTCCTCTCGACGTCCAGCGGCTaGTGTCTCTGCAGTTCCACGTGGCTGGGGAGGCCTCACAATCAT +
Preference number: 6 (lower is better)
Translates to: PVSSSTNVFLSTSSG*CLCSSTWLGRPHNH
Trigger: ATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACACAAGCCGCTGGACGTCGAGAGGAACACATTGGTGGAGGAACTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS GCA 72 bp CCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTTaGAGTTTCACCCAGTGGGCAGGGCTGGGTTTCTGT +
Preference number: 6 (lower is better)
Translates to: PLSTCWFPTLST*SFTQWAGLGFC
Trigger: ACAGAAACCCAGCCCTGCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658351.1
ENST00000670979.1
CDS GCA 72 bp AATGTGTTCCTCTCGACGTCCAGCGGCTTGTGTCTCTaGAGTTCCACGTGGCTGGGGAGGCCTCACAATCAT +
Preference number: 6 (lower is better)
Translates to: NVFLSTSSGLCL*SSTWLGRPHNH
Trigger: ATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACACAAGCCGCTGGACGTCGAGAGGAACACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS CAA 72 bp TCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTaGCAGTTTCACCCAGTGGGCAGGGCTGGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: SSLNLLVSHALD*QFHPVGRAGFL
Trigger: CAGAAACCCAGCCCTGCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000658351.1
ENST00000670979.1
CDS CAA 90 bp ACTTCTGGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTaGCAGTTTCACCCAGTGGGCAGGGCTGGGTTTCTGTTAGCCTGG +
Preference number: 6 (lower is better)
Translates to: TSGSSLNLLVSHALD*QFHPVGRAGFLLAW
Trigger: CCAGGCTAACAGAAACCCAGCCCTGCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670979.1
CDS TCA 72 bp TCCGCCAGTGTGTTCCTCTTGACATCCAGCCACCTGTaGGTTCCTCCACCAATGTGTTCCTCTCGACGTCCA +
Preference number: 6 (lower is better)
Translates to: SASVFLLTSSHL*VPPPMCSSRRP
Trigger: TGGACGTCGAGAGGAACACATTGGTGGAGGAACTCACAGGTGGCTGGATGTCAAGAGGAACACACTGGCGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658351.1
CDS TCA 72 bp AATCATAGGAAGTCAAAGCTGTCCTCTTCAGCTAAGTaGGTTCCTGGGTGTGGGGCCACAGACCAGACGAGC +
Preference number: 6 (lower is better)
Translates to: NHRKSKLSSSAK*VPGCGATDQTS
Trigger: GCTCGTCTGGTCTGTGGCCCCACACCCAGGAACTCACTTAGCTGAAGAGGACAGCTTTGACTTCCTATGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 72 bp CAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTaGAAAACAAGGAGGAGCAAGTCACATCCTTTCGGA +
Preference number: 6 (lower is better)
Translates to: QFHVAGEASQSC*KTRRSKSHPFG
Trigger: TCCGAAAGGATGTGACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CAA 90 bp ATCTTTCCCGTTTTAGAAGGGGTTACTTCTGGATCCTCTCTCAACTaGCTGGTTTCCCACGCTCTCGACTTGCAGTTTCACCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: IFPVLEGVTSGSSLN*LVSHALDLQFHPVG
Trigger: GCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000658351.1
ENST00000670979.1
CDS GCA 72 bp CTCTTTGTAATTGCCCAATGGGTTCTTCTTGCCCACTaGCCAGCTAGAGCTGACATTCAGACAGGAGAACTG +
Preference number: 6 (lower is better)
Translates to: LFVIAQWVLLAH*PARADIQTGEL
Trigger: CAGTTCTCCTGTCTGAATGTCAGCTCTAGCTGGGCAGTGGGCAAGAAGAACCCATTGGGCAATTACAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 72 bp GGAAGGCATCTTTCCCGTTTTAGAAGGGGTTACTTCTaGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCT +
Preference number: 6 (lower is better)
Translates to: GRHLSRFRRGYF*ILSQLAGFPRS
Trigger: AGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGATGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446884.2
ENST00000658351.1
ENST00000660228.1
ENST00000668280.1
ENST00000670979.1
CDS CCA 72 bp CAGTCATGTCTTACTTCCCTCTTTGTAATTGCCCAATaGGTTCTTCTTGCCCACTGCCCAGCTAGAGCTGAC +
Preference number: 6 (lower is better)
Translates to: QSCLTSLFVIAQ*VLLAHCPARAD
Trigger: GTCAGCTCTAGCTGGGCAGTGGGCAAGAAGAACCCATTGGGCAATTACAAAGAGGGAAGTAAGACATGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS TCA 72 bp CAGACGAGCCAGTTTACTGGTCTAGGTGATGCCAGTTaGTCCATCAAGTGCAGGGTCTTTGACTCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: QTSQFTGLGDAS*SIKCRVFDSSQ
Trigger: TTGAGAAGAGTCAAAGACCCTGCACTTGATGGATCAACTGGCATCACCTAGACCAGTAAACTGGCTCGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 72 bp CAGAAACTCACAAGTACTCAAACAGTTCCACGTGGCTaGGGAGGCCTCACAATCATGTTGGAAAACAAGGAG +
Preference number: 6 (lower is better)
Translates to: QKLTSTQTVPRG*GGLTIMLENKE
Trigger: CTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTTTGAGTACTTGTGAGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 72 bp ATGCAGAGCTTCTGTGGTCTTCTCCTTGCTTTTGGATaGAACGCTGCAGAGTGTGCTGTCATTGTGATATCT +
Preference number: 6 (lower is better)
Translates to: MQSFCGLLLAFG*NAAECAVIVIS
Trigger: AGATATCACAATGACAGCACACTCTGCAGCGTTCCATCCAAAAGCAAGGAGAAGACCACAGAAGCTCTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670979.1
CDS TCA 72 bp TATGGAGTAGGGAGTGCTGATTGGTCAGGTTGTGGATaGAATCATAGGAAGTCAAAGCTGTCCTCTTCAGCT +
Preference number: 6 (lower is better)
Translates to: YGVGSADWSGCG*NHRKSKLSSSA
Trigger: AGCTGAAGAGGACAGCTTTGACTTCCTATGATTTCATCCACAACCTGACCAATCAGCACTCCCTACTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 72 bp AGTCACTTAGAGACTCTCAGGAAAATAAGCCCAGGATaGCCATCAAGATTAGGGAACATACTGGCCCAAACA +
Preference number: 6 (lower is better)
Translates to: SHLETLRKISPG*PSRLGNILAQT
Trigger: TGTTTGGGCCAGTATGTTCCCTAATCTTGATGGCCATCCTGGGCTTATTTTCCTGAGAGTCTCTAAGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000446884.2
ENST00000670979.1
CDS GCA 72 bp GAAGCAAATGGGACAGAATCCAGGAAAAGTTCCAAATaGAGAGCTTCTGTGGTCTTCTCCTTGCTTTTGGAT +
Preference number: 6 (lower is better)
Translates to: EANGTESRKSSK*RASVVFSLLLD
Trigger: ATCCAAAAGCAAGGAGAAGACCACAGAAGCTCTGCATTTGGAACTTTTCCTGGATTCTGTCCCATTTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670979.1
CDS CCA 72 bp TTCCGTAACTGCTACAAAACTTGTGGTTGGCAAGATTaGGATAAGTTGGCTTTGAGAAATGTGAGCCCCTTT +
Preference number: 6 (lower is better)
Translates to: FRNCYKTCGWQD*DKLALRNVSPF
Trigger: AAAGGGGCTCACATTTCTCAAAGCCAACTTATCCCAATCTTGCCAACCACAAGTTTTGTAGCAGTTACGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000668280.1
CDS CCA 72 bp GTCTTTGACTCTTCTCAAATCATAACAACCAATTTCTaGGCCAGGGCTCCAATCTCTAAAATATCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: VFDSSQIITTNF*ARAPISKISSC
Trigger: GCAGGAAGATATTTTAGAGATTGGAGCCCTGGCCCAGAAATTGGTTGTTATGATTTGAGAAGAGTCAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668280.1