Pregenerated sensors for LINC01186 (Homo sapiens)
Ensembl gene IDs: ENSG00000236751Ensembl transcript IDs: ENST00000446884.2, ENST00000658351.1, ENST00000660228.1, ENST00000668280.1, ENST00000670979.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | GTGTGCTCTTCCGCCAGTGTGTTCCTCTTGACATCCAGCCACCTGTaGGTTCCTCCACCAATGTGTTCCTCTCGACGTCCAGCGGCTTGT | + |
Preference number: 5 (lower is better) Translates to: VCSSASVFLLTSSHL*VPPPMCSSRRPAAC Trigger: ACAAGCCGCTGGACGTCGAGAGGAACACATTGGTGGAGGAACTCACAGGTGGCTGGATGTCAAGAGGAACACACTGGCGGAAGAGCACAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS GCA 90 bp | TCCTCCACCAATGTGTTCCTCTCGACGTCCAGCGGCTTGTGTCTCTaGAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTGGAAAA | + |
Preference number: 5 (lower is better) Translates to: SSTNVFLSTSSGLCL*SSTWLGRPHNHVGK Trigger: TTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACACAAGCCGCTGGACGTCGAGAGGAACACATTGGTGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS CCA 90 bp | GTGTCTCTGCAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTaGAAAACAAGGAGGAGCAAGTCACATCTGGCCCAAACAGCTGCA | + |
Preference number: 5 (lower is better) Translates to: VSLQFHVAGEASQSC*KTRRSKSHLAQTAA Trigger: TGCAGCTGTTTGGGCCAGATGTGACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS GCA 90 bp | GCCATCCGGTCTATAGGTAAAGAGCAGATGCCTCCCACAGAGCTGTaGTCCACAGAAGAAACAAAGGGGCTCTTCGAAAGGGACATGTCC | + |
Preference number: 5 (lower is better) Translates to: AIRSIGKEQMPPTEL*STEETKGLFERDMS Trigger: GGACATGTCCCTTTCGAAGAGCCCCTTTGTTTCTTCTGTGGAGCACAGCTCTGTGGGAGGCATCTGCTCTTTACCTATAGACCGGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446884.2 |
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CDS CCA 90 bp | AGTGCTTTCGGAAGGCATCTTTCCCGTTTTAGAAGGGGTTACTTCTaGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTTGCA | + |
Preference number: 5 (lower is better) Translates to: SAFGRHLSRFRRGYF*ILSQLAGFPRSRLA Trigger: TGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGATGCCTTCCGAAAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658351.1 ENST00000660228.1 ENST00000670979.1 |
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CDS CCA 90 bp | CATCCTTTCGGAAGGCATCTTTCCCGTTTTAGAAGGGGTTACTTCTaGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTTGCA | + |
Preference number: 5 (lower is better) Translates to: HPFGRHLSRFRRGYF*ILSQLAGFPRSRLA Trigger: TGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGATGCCTTCCGAAAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 90 bp | GTACTCAAACAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTaGAAAACAAGGAGGAGCAAGTCACATCCTTTCGGAAGGCATCTT | + |
Preference number: 5 (lower is better) Translates to: VLKQFHVAGEASQSC*KTRRSKSHPFGRHL Trigger: AAGATGCCTTCCGAAAGGATGTGACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTTTGAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS TCA 90 bp | GCCACAGACCAGACGAGCCAGTTTACTGGTCTAGGTGATGCCAGTTaGTCCATCAAGTGCAGGGTCTTTGACTCTTCTCAAATCATAACA | + |
Preference number: 5 (lower is better) Translates to: ATDQTSQFTGLGDAS*SIKCRVFDSSQIIT Trigger: TGTTATGATTTGAGAAGAGTCAAAGACCCTGCACTTGATGGATCAACTGGCATCACCTAGACCAGTAAACTGGCTCGTCTGGTCTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS GCA 90 bp | CTTACTTCCCTCTTTGTAATTGCCCAATGGGTTCTTCTTGCCCACTaGCCAGCTAGAGCTGACATTCAGACAGGAGAACTGCAATACAGA | + |
Preference number: 5 (lower is better) Translates to: LTSLFVIAQWVLLAH*PARADIQTGELQYR Trigger: TCTGTATTGCAGTTCTCCTGTCTGAATGTCAGCTCTAGCTGGGCAGTGGGCAAGAAGAACCCATTGGGCAATTACAAAGAGGGAAGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 90 bp | CTATTATGTCAGAAACTCACAAGTACTCAAACAGTTCCACGTGGCTaGGGAGGCCTCACAATCATGTTGGAAAACAAGGAGGAGCAAGTC | + |
Preference number: 5 (lower is better) Translates to: LLCQKLTSTQTVPRG*GGLTIMLENKEEQV Trigger: GACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTTTGAGTACTTGTGAGTTTCTGACATAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 90 bp | AAGTGCAGGGTCTTTGACTCTTCTCAAATCATAACAACCAATTTCTaGGCCAGGGCTCCAATCTCTAAAATATCTTCCTGCTCTGATCTT | + |
Preference number: 5 (lower is better) Translates to: KCRVFDSSQIITTNF*ARAPISKISSCSDL Trigger: AAGATCAGAGCAGGAAGATATTTTAGAGATTGGAGCCCTGGCCCAGAAATTGGTTGTTATGATTTGAGAAGAGTCAAAGACCCTGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS TCA 90 bp | ATACAGAAAGAGTTTAATATACTAGAGCTGGCTAAACAGGAAACCTaGGTTTTATTATTACTCAAATCAGCCTCCTCAAAACTTCAGAGG | + |
Preference number: 5 (lower is better) Translates to: IQKEFNILELAKQET*VLLLLKSASSKLQR Trigger: CCTCTGAAGTTTTGAGGAGGCTGATTTGAGTAATAATAAAACTCAGGTTTCCTGTTTAGCCAGCTCTAGTATATTAAACTCTTTCTGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 90 bp | TGGAGAAATATGATAGGACAAAGAATATTATCTAATGGTAATAAATaGGGCAGGGACTTAACGAGGCCTGTTTGTTTGAATTTTTCTCTG | + |
Preference number: 5 (lower is better) Translates to: WRNMIGQRILSNGNK*GRDLTRPVCLNFSL Trigger: CAGAGAAAAATTCAAACAAACAGGCCTCGTTAAGTCCCTGCCCCATTTATTACCATTAGATAATATTCTTTGTCCTATCATATTTCTCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660228.1 |
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CDS GCA 72 bp | CTCCTCCGACTGCCCAGGCCAAACTCCACATCGTTCTaGAGGTTGATGGCCTGCCGGCGTGCCCCAGCGTGC | + |
Preference number: 6 (lower is better) Translates to: LLRLPRPNSTSF*RLMACRRAPAC Trigger: GCACGCTGGGGCACGCCGGCAGGCCATCAACCTGCAGAACGATGTGGAGTTTGGCCTGGGCAGTCGGAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS TCA 72 bp | GACTGCCCAGGCCAAACTCCACATCGTTCTGCAGGTTaGTGGCCTGCCGGCGTGCCCCAGCGTGCCGTTGTC | + |
Preference number: 6 (lower is better) Translates to: DCPGQTPHRSAG*WPAGVPQRAVV Trigger: GACAACGGCACGCTGGGGCACGCCGGCAGGCCATCAACCTGCAGAACGATGTGGAGTTTGGCCTGGGCAGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS CAA 72 bp | CGACTGCCCAGGCCAAACTCCACATCGTTCTGCAGGTaGATGGCCTGCCGGCGTGCCCCAGCGTGCCGTTGT | + |
Preference number: 6 (lower is better) Translates to: RLPRPNSTSFCR*MACRRAPACRC Trigger: ACAACGGCACGCTGGGGCACGCCGGCAGGCCATCAACCTGCAGAACGATGTGGAGTTTGGCCTGGGCAGTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS GCA 72 bp | CCCCAGCGTGCCGTTGTCTGCTGGTGCTTGTCAGTGTaGTCTTCCGCCAGTGTGTTCCTCTTGACATCCAGC | + |
Preference number: 6 (lower is better) Translates to: PQRAVVCWCLSV*SSASVFLLTSS Trigger: GCTGGATGTCAAGAGGAACACACTGGCGGAAGAGCACACTGACAAGCACCAGCAGACAACGGCACGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS CAA 90 bp | CCTGTGAGTTCCTCCACCAATGTGTTCCTCTCGACGTCCAGCGGCTaGTGTCTCTGCAGTTCCACGTGGCTGGGGAGGCCTCACAATCAT | + |
Preference number: 6 (lower is better) Translates to: PVSSSTNVFLSTSSG*CLCSSTWLGRPHNH Trigger: ATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACACAAGCCGCTGGACGTCGAGAGGAACACATTGGTGGAGGAACTCACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS GCA 72 bp | CCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTTaGAGTTTCACCCAGTGGGCAGGGCTGGGTTTCTGT | + |
Preference number: 6 (lower is better) Translates to: PLSTCWFPTLST*SFTQWAGLGFC Trigger: ACAGAAACCCAGCCCTGCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658351.1 ENST00000670979.1 |
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CDS GCA 72 bp | AATGTGTTCCTCTCGACGTCCAGCGGCTTGTGTCTCTaGAGTTCCACGTGGCTGGGGAGGCCTCACAATCAT | + |
Preference number: 6 (lower is better) Translates to: NVFLSTSSGLCL*SSTWLGRPHNH Trigger: ATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGCAGAGACACAAGCCGCTGGACGTCGAGAGGAACACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS CAA 72 bp | TCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTaGCAGTTTCACCCAGTGGGCAGGGCTGGGTTTCTG | + |
Preference number: 6 (lower is better) Translates to: SSLNLLVSHALD*QFHPVGRAGFL Trigger: CAGAAACCCAGCCCTGCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658351.1 ENST00000670979.1 |
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CDS CAA 90 bp | ACTTCTGGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCTCGACTaGCAGTTTCACCCAGTGGGCAGGGCTGGGTTTCTGTTAGCCTGG | + |
Preference number: 6 (lower is better) Translates to: TSGSSLNLLVSHALD*QFHPVGRAGFLLAW Trigger: CCAGGCTAACAGAAACCCAGCCCTGCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670979.1 |
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CDS TCA 72 bp | TCCGCCAGTGTGTTCCTCTTGACATCCAGCCACCTGTaGGTTCCTCCACCAATGTGTTCCTCTCGACGTCCA | + |
Preference number: 6 (lower is better) Translates to: SASVFLLTSSHL*VPPPMCSSRRP Trigger: TGGACGTCGAGAGGAACACATTGGTGGAGGAACTCACAGGTGGCTGGATGTCAAGAGGAACACACTGGCGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658351.1 |
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CDS TCA 72 bp | AATCATAGGAAGTCAAAGCTGTCCTCTTCAGCTAAGTaGGTTCCTGGGTGTGGGGCCACAGACCAGACGAGC | + |
Preference number: 6 (lower is better) Translates to: NHRKSKLSSSAK*VPGCGATDQTS Trigger: GCTCGTCTGGTCTGTGGCCCCACACCCAGGAACTCACTTAGCTGAAGAGGACAGCTTTGACTTCCTATGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 72 bp | CAGTTCCACGTGGCTGGGGAGGCCTCACAATCATGTTaGAAAACAAGGAGGAGCAAGTCACATCCTTTCGGA | + |
Preference number: 6 (lower is better) Translates to: QFHVAGEASQSC*KTRRSKSHPFG Trigger: TCCGAAAGGATGTGACTTGCTCCTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CAA 90 bp | ATCTTTCCCGTTTTAGAAGGGGTTACTTCTGGATCCTCTCTCAACTaGCTGGTTTCCCACGCTCTCGACTTGCAGTTTCACCCAGTGGGC | + |
Preference number: 6 (lower is better) Translates to: IFPVLEGVTSGSSLN*LVSHALDLQFHPVG Trigger: GCCCACTGGGTGAAACTGCAAGTCGAGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658351.1 ENST00000670979.1 |
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CDS GCA 72 bp | CTCTTTGTAATTGCCCAATGGGTTCTTCTTGCCCACTaGCCAGCTAGAGCTGACATTCAGACAGGAGAACTG | + |
Preference number: 6 (lower is better) Translates to: LFVIAQWVLLAH*PARADIQTGEL Trigger: CAGTTCTCCTGTCTGAATGTCAGCTCTAGCTGGGCAGTGGGCAAGAAGAACCCATTGGGCAATTACAAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 72 bp | GGAAGGCATCTTTCCCGTTTTAGAAGGGGTTACTTCTaGATCCTCTCTCAACTTGCTGGTTTCCCACGCTCT | + |
Preference number: 6 (lower is better) Translates to: GRHLSRFRRGYF*ILSQLAGFPRS Trigger: AGAGCGTGGGAAACCAGCAAGTTGAGAGAGGATCCAGAAGTAACCCCTTCTAAAACGGGAAAGATGCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000446884.2 ENST00000658351.1 ENST00000660228.1 ENST00000668280.1 ENST00000670979.1 |
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CDS CCA 72 bp | CAGTCATGTCTTACTTCCCTCTTTGTAATTGCCCAATaGGTTCTTCTTGCCCACTGCCCAGCTAGAGCTGAC | + |
Preference number: 6 (lower is better) Translates to: QSCLTSLFVIAQ*VLLAHCPARAD Trigger: GTCAGCTCTAGCTGGGCAGTGGGCAAGAAGAACCCATTGGGCAATTACAAAGAGGGAAGTAAGACATGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS TCA 72 bp | CAGACGAGCCAGTTTACTGGTCTAGGTGATGCCAGTTaGTCCATCAAGTGCAGGGTCTTTGACTCTTCTCAA | + |
Preference number: 6 (lower is better) Translates to: QTSQFTGLGDAS*SIKCRVFDSSQ Trigger: TTGAGAAGAGTCAAAGACCCTGCACTTGATGGATCAACTGGCATCACCTAGACCAGTAAACTGGCTCGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 72 bp | CAGAAACTCACAAGTACTCAAACAGTTCCACGTGGCTaGGGAGGCCTCACAATCATGTTGGAAAACAAGGAG | + |
Preference number: 6 (lower is better) Translates to: QKLTSTQTVPRG*GGLTIMLENKE Trigger: CTCCTTGTTTTCCAACATGATTGTGAGGCCTCCCCAGCCACGTGGAACTGTTTGAGTACTTGTGAGTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 72 bp | ATGCAGAGCTTCTGTGGTCTTCTCCTTGCTTTTGGATaGAACGCTGCAGAGTGTGCTGTCATTGTGATATCT | + |
Preference number: 6 (lower is better) Translates to: MQSFCGLLLAFG*NAAECAVIVIS Trigger: AGATATCACAATGACAGCACACTCTGCAGCGTTCCATCCAAAAGCAAGGAGAAGACCACAGAAGCTCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670979.1 |
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CDS TCA 72 bp | TATGGAGTAGGGAGTGCTGATTGGTCAGGTTGTGGATaGAATCATAGGAAGTCAAAGCTGTCCTCTTCAGCT | + |
Preference number: 6 (lower is better) Translates to: YGVGSADWSGCG*NHRKSKLSSSA Trigger: AGCTGAAGAGGACAGCTTTGACTTCCTATGATTTCATCCACAACCTGACCAATCAGCACTCCCTACTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 72 bp | AGTCACTTAGAGACTCTCAGGAAAATAAGCCCAGGATaGCCATCAAGATTAGGGAACATACTGGCCCAAACA | + |
Preference number: 6 (lower is better) Translates to: SHLETLRKISPG*PSRLGNILAQT Trigger: TGTTTGGGCCAGTATGTTCCCTAATCTTGATGGCCATCCTGGGCTTATTTTCCTGAGAGTCTCTAAGTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000446884.2 ENST00000670979.1 |
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CDS GCA 72 bp | GAAGCAAATGGGACAGAATCCAGGAAAAGTTCCAAATaGAGAGCTTCTGTGGTCTTCTCCTTGCTTTTGGAT | + |
Preference number: 6 (lower is better) Translates to: EANGTESRKSSK*RASVVFSLLLD Trigger: ATCCAAAAGCAAGGAGAAGACCACAGAAGCTCTGCATTTGGAACTTTTCCTGGATTCTGTCCCATTTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670979.1 |
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CDS CCA 72 bp | TTCCGTAACTGCTACAAAACTTGTGGTTGGCAAGATTaGGATAAGTTGGCTTTGAGAAATGTGAGCCCCTTT | + |
Preference number: 6 (lower is better) Translates to: FRNCYKTCGWQD*DKLALRNVSPF Trigger: AAAGGGGCTCACATTTCTCAAAGCCAACTTATCCCAATCTTGCCAACCACAAGTTTTGTAGCAGTTACGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668280.1 |
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CDS CCA 72 bp | GTCTTTGACTCTTCTCAAATCATAACAACCAATTTCTaGGCCAGGGCTCCAATCTCTAAAATATCTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: VFDSSQIITTNF*ARAPISKISSC Trigger: GCAGGAAGATATTTTAGAGATTGGAGCCCTGGCCCAGAAATTGGTTGTTATGATTTGAGAAGAGTCAAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668280.1 |