Pregenerated sensors for LINC01184 (Homo sapiens)
Ensembl gene IDs: ENSG00000245937Ensembl transcript IDs: ENST00000499346.7, ENST00000501173.6, ENST00000501652.5, ENST00000501702.7, ENST00000508353.5, ENST00000508878.5, ENST00000512185.1, ENST00000514409.6, ENST00000514573.5, ENST00000606251.2, ENST00000606855.1, ENST00000654888.1, ENST00000655628.1, ENST00000656154.1, ENST00000656563.1, ENST00000657475.1, ENST00000657683.1, ENST00000659415.1, ENST00000659990.1, ENST00000660180.1, ENST00000660408.1, ENST00000661296.1, ENST00000661552.1, ENST00000663841.1, ENST00000663976.1, ENST00000664006.1, ENST00000665302.1, ENST00000665599.1, ENST00000668265.1, ENST00000668567.1
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCGGAGATTCGCGGCGGCGGGTCAGAGCCCAGAGCAAACCAGGCTaGGGAACGCACCTCGCCCGCGGCTCCGGAAGCGGCTGCGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SGDSRRRVRAQSKPG*GTHLARGSGSGCGP Trigger: GGGGCCGCAGCCGCTTCCGGAGCCGCGGGCGAGGTGCGTTCCCCAGCCTGGTTTGCTCTGGGCTCTGACCCGCCGCCGCGAATCTCCGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS GCA 90 bp | CGACCGGAAAGCCCCCAGCATCGCCCGAAGGAATCGCGGCTGGCCTaGGGCTCCGGCCCGGCCTCGGGTACCACGCGCCTAGTGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RPESPQHRPKESRLA*GSGPASGTTRLVGS Trigger: GCTTCCCACTAGGCGCGTGGTACCCGAGGCCGGGCCGGAGCCGCAGGCCAGCCGCGATTCCTTCGGGCGATGCTGGGGGCTTTCCGGTCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000499346.7 ENST00000501702.7 ENST00000514409.6 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656563.1 ENST00000664006.1 ENST00000668567.1 |
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| CDS GCA 90 bp | GACAGAGAAGACCGCTTGCACCTCGCCCGCGGCTCCGGAAGCGGCTaGGGCCCCGACCGGAAAGCCCCCAGCATCGCCCGAAGGAATCGC | + |
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Preference number: 5 (lower is better) Translates to: DREDRLHLARGSGSG*GPDRKAPSIARRNR Trigger: GCGATTCCTTCGGGCGATGCTGGGGGCTTTCCGGTCGGGGCCGCAGCCGCTTCCGGAGCCGCGGGCGAGGTGCAAGCGGTCTTCTCTGTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000501702.7 ENST00000514409.6 ENST00000656563.1 |
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| CDS GCA 90 bp | GCCAAGATCATGGTGAATCGACTCGCCCGCGGCTCCGGAAGCGGCTaGGGCCCCGACCGGAAAGCCCCCAGCATCGCCCGAAGGAATCGC | + |
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Preference number: 5 (lower is better) Translates to: AKIMVNRLARGSGSG*GPDRKAPSIARRNR Trigger: GCGATTCCTTCGGGCGATGCTGGGGGCTTTCCGGTCGGGGCCGCAGCCGCTTCCGGAGCCGCGGGCGAGTCGATTCACCATGATCTTGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514573.5 |
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| CDS TCA 90 bp | CTCCGGCCCGGCCTCGGGTACCACGCGCCTAGTGGGAAGCCGCACTaGCGCCTGCAGCATCTCGCGAGATTTCGGGCTCAGCCCAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LRPGLGYHAPSGKPH*RLQHLARFRAQPKY Trigger: GTACTTGGGCTGAGCCCGAAATCTCGCGAGATGCTGCAGGCGTCAGTGCGGCTTCCCACTAGGCGCGTGGTACCCGAGGCCGGGCCGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654888.1 |
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| CDS GCA 90 bp | CTTCCCCTGGAGTTGGGCCGCCCAGGGGCTGGACTCCGCTCTGACTaGCCCGAGCCAAACATCTCTCGGTGTCCAGACGTCCCTCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LPLELGRPGAGLRSD*PEPNISRCPDVPPL Trigger: AAGAGGAGGGACGTCTGGACACCGAGAGATGTTTGGCTCGGGGCAGTCAGAGCGGAGTCCAGCCCCTGGGCGGCCCAACTCCAGGGGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS GCA 90 bp | CCGGCCTCGGGTACCACGCGCCTAGTGGGAAGCCGCACTGACGCCTaGAGCATCTCGCGAGATTTCGGGCTCAGCCCAAGTACTGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: PASGTTRLVGSRTDA*SISRDFGLSPSTAS Trigger: ACTCGCAGTACTTGGGCTGAGCCCGAAATCTCGCGAGATGCTGCAGGCGTCAGTGCGGCTTCCCACTAGGCGCGTGGTACCCGAGGCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654888.1 |
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| CDS TCA 90 bp | CTTCACCAGCTGCCAAGGGCTACACTGACTCTGGTCGAGTGCTCCTaGAGCTTGAGGCATCACCACGTGGGGATGCCCTCTCTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LHQLPRATLTLVECS*SLRHHHVGMPSLVS Trigger: AGAGACCAGAGAGGGCATCCCCACGTGGTGATGCCTCAAGCTTCAGGAGCACTCGACCAGAGTCAGTGTAGCCCTTGGCAGCTGGTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606855.1 |
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| CDS GCA 90 bp | GCCAATCTAGGTCTGCCTGGCAGGGTGAGTCTACCGCTCGAAAGCTaGACAGAGGAAATCCTCCCTCCTCCAGGTTCAGGCCCGGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: ANLGLPGRVSLPLES*TEEILPPPGSGPEL Trigger: TAACTCCGGGCCTGAACCTGGAGGAGGGAGGATTTCCTCTGTGCAGCTTTCGAGCGGTAGACTCACCCTGCCAGGCAGACCTAGATTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS GCA 90 bp | CCTCTTCTCTCTTTCTCTGCTACGTCGTTTTGCCGTCAGTCGGCTTaGCTCGTATCTCCTCACCTGCTGGTATGCTCTGGAGGTTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: PLLSFSATSFCRQSA*LVSPHLLVCSGGWG Trigger: ACCCCAACCTCCAGAGCATACCAGCAGGTGAGGAGATACGAGGCAAGCCGACTGACGGCAAAACGACGTAGCAGAGAAAGAGAGAAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS GCA 90 bp | TGTCCAGACGTCCCTCCTCTTCTCTCTTTCTCTGCTACGTCGTTTTaGCGTCAGTCGGCTTGCCTCGTATCTCCTCACCTGCTGGTATGC | + |
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Preference number: 5 (lower is better) Translates to: CPDVPPLLSFSATSF*RQSACLVSPHLLVC Trigger: GCATACCAGCAGGTGAGGAGATACGAGGCAAGCCGACTGACGGCAAAACGACGTAGCAGAGAAAGAGAGAAGAGGAGGGACGTCTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS GCA 90 bp | TGTGTAGACACCCACTGCATCACAACTGGAACTGATCTCTGGTTATaGCAATCTAGGTCTGCCTGGCAGGGTGAGTCTACCGCTCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: CVDTHCITTGTDLWL*QSRSAWQGESTARK Trigger: CTTTCGAGCGGTAGACTCACCCTGCCAGGCAGACCTAGATTGGCATAACCAGAGATCAGTTCCAGTTGTGATGCAGTGGGTGTCTACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508353.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS CCA 90 bp | CAGAAGTGTGTAGACACCCACTGCATCACAACTGGAACTGATCTCTaGTTATGCCAATCTAGGTCTGCCTGGCAGGGTGAGTCTACCGCT | + |
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Preference number: 5 (lower is better) Translates to: QKCVDTHCITTGTDL*LCQSRSAWQGESTA Trigger: AGCGGTAGACTCACCCTGCCAGGCAGACCTAGATTGGCATAACCAGAGATCAGTTCCAGTTGTGATGCAGTGGGTGTCTACACACTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508353.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS CCA 90 bp | ATCACAACTGGAACTGATCTCTGGTTATGCCAATCTAGGTCTGCCTaGCAGGGTGAGTCTACCGCTCGAAAGCTGCACAGAGGAAATCCT | + |
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Preference number: 5 (lower is better) Translates to: ITTGTDLWLCQSRSA*QGESTARKLHRGNP Trigger: AGGATTTCCTCTGTGCAGCTTTCGAGCGGTAGACTCACCCTGCCAGGCAGACCTAGATTGGCATAACCAGAGATCAGTTCCAGTTGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS CCA 90 bp | CGTGGGGATGCCCTCTCTGGTCTCTCCATACATGGACTAATGGCTTaGCTACGATTGCTACTTGGATCTGCTCAGTTCTGGTTAGCAACA | + |
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Preference number: 5 (lower is better) Translates to: RGDALSGLSIHGLMA*LRLLLGSAQFWLAT Trigger: TGTTGCTAACCAGAACTGAGCAGATCCAAGTAGCAATCGTAGCCAAGCCATTAGTCCATGTATGGAGAGACCAGAGAGGGCATCCCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000606855.1 |
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| CDS CCA 90 bp | CCAAGCACTGACACTTCAGAACCAATTGTATCAGAGCTTGTGGTTTaGCTTCCCAGGCTGGTTGCTGCAGAGGTTGTGTGTCCGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PSTDTSEPIVSELVV*LPRLVAAEVVCPSS Trigger: AGAACTCGGACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTGGTTCTGAAGTGTCAGTGCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 90 bp | ATTGACCAAGCACTGACACTTCAGAACCAATTGTATCAGAGCTTGTaGTTTGGCTTCCCAGGCTGGTTGCTGCAGAGGTTGTGTGTCCGA | + |
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Preference number: 5 (lower is better) Translates to: IDQALTLQNQLYQSL*FGFPGWLLQRLCVR Trigger: TCGGACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTGGTTCTGAAGTGTCAGTGCTTGGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS GCA 90 bp | AGCAATATTCTGCCATGGGTCCTGAGTGAAACTGACAGCCCAACATaGCTCTCTTACTCCATCTCATCTTCAGCACCAACTCTTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SNILPWVLSETDSPT*LSYSISSSAPTLPR Trigger: TCTGGGAAGAGTTGGTGCTGAAGATGAGATGGAGTAAGAGAGGCATGTTGGGCTGTCAGTTTCACTCAGGACCCATGGCAGAATATTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000665599.1 |
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| CDS GCA 90 bp | GTCCTGTTTTTCATTCTATTCCGATACCCCAAGAGAAATGAATCTTaGCTCACCTTTGCCAGGCCTCCTTACTGGGCTCTTGCCTCACCT | + |
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Preference number: 5 (lower is better) Translates to: VLFFILFRYPKRNES*LTFARPPYWALASP Trigger: AGGTGAGGCAAGAGCCCAGTAAGGAGGCCTGGCAAAGGTGAGGCAAGATTCATTTCTCTTGGGGTATCGGAATAGAATGAAAAACAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS GCA 90 bp | CACCTTATCCAGTGTTTTCTCCAGCTGCAGCTACTGGAGGCCTGTTaGTTGACTATTTCATGGCGGCTTATTTGTGGGCTACGACTGTTA | + |
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Preference number: 5 (lower is better) Translates to: HLIQCFLQLQLLEAC*LTISWRLICGLRLL Trigger: TAACAGTCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCCTCCAGTAGCTGCAGCTGGAGAAAACACTGGATAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665599.1 |
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| CDS CCA 90 bp | AAAGGCAGAAAAGCAGGTTTGGGGAAGCTGGAGAGGAGTTCTGTGTaGCTCCTTGGCGTCTGTGGTAACAGAATTCAATCTTGGTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: KGRKAGLGKLERSSV*LLGVCGNRIQSWLS Trigger: ACTCAACCAAGATTGAATTCTGTTACCACAGACGCCAAGGAGCCACACAGAACTCCTCTCCAGCTTCCCCAAACCTGCTTTTCTGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CCA 90 bp | CTTCAGAACCAATTGTATCAGAGCTTGTGGTTTGGCTTCCCAGGCTaGTTGCTGCAGAGGTTGTGTGTCCGAGTTCTATTGACATATATG | + |
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Preference number: 5 (lower is better) Translates to: LQNQLYQSLWFGFPG*LLQRLCVRVLLTYM Trigger: CATATATGTCAATAGAACTCGGACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTGGTTCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 90 bp | TTTCTCCAGCTGCAGCTACTGGAGGCCTGTTGCTTGACTATTTCATaGCGGCTTATTTGTGGGCTACGACTGTTATGTCTAAAGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: FLQLQLLEACCLTIS*RLICGLRLLCLKEI Trigger: GATTTCCTTTAGACATAACAGTCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCCTCCAGTAGCTGCAGCTGGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665599.1 |
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| CDS TCA 90 bp | TGTTTTTGTTATGGTCCGTTGGTAGCAATATTCTGCCATGGGTCCTaGGTGAAACTGACAGCCCAACATGCCTCTCTTACTCCATCTCAT | + |
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Preference number: 5 (lower is better) Translates to: CFCYGPLVAIFCHGS*VKLTAQHASLTPSH Trigger: ATGAGATGGAGTAAGAGAGGCATGTTGGGCTGTCAGTTTCACTCAGGACCCATGGCAGAATATTGCTACCAACGGACCATAACAAAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000665599.1 |
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| CDS CCA 90 bp | TCCACATGGCTCCTGCTCCTTCTAGTCCTTATAATTCTTTCCTATTaGGGCCCAACTTCTTCATTTACATGGCTCTTATCTCTGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: STWLLLLLVLIILSY*GPTSSFTWLLSLAS Trigger: GGAAGCCAGAGATAAGAGCCATGTAAATGAAGAAGTTGGGCCCCAATAGGAAAGAATTATAAGGACTAGAAGGAGCAGGAGCCATGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS CCA 90 bp | TTCTTCTTGTTTTTGTTATGGTCCGTTGGTAGCAATATTCTGCCATaGGTCCTGAGTGAAACTGACAGCCCAACATGCCTCTCTTACTCC | + |
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Preference number: 5 (lower is better) Translates to: FFLFLLWSVGSNILP*VLSETDSPTCLSYS Trigger: GGAGTAAGAGAGGCATGTTGGGCTGTCAGTTTCACTCAGGACCCATGGCAGAATATTGCTACCAACGGACCATAACAAAAACAAGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000665599.1 |
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| CDS CCA 90 bp | GTTTGGGGCTTAGGTGACTGTTGTCCAGTTGTATCAACAAGATGCTaGTCCAAACCTATTATAGCAGCTTCTAGAGCAAGACATGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VWGLGDCCPVVSTRC*SKPIIAASRARHGR Trigger: TCTGCCATGTCTTGCTCTAGAAGCTGCTATAATAGGTTTGGACCAGCATCTTGTTGATACAACTGGACAACAGTCACCTAAGCCCCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS CCA 90 bp | GGACAGAGAAGGAGGGAGAATGAGTTCAAAAATGCCTTATTGAATTaGCCACCACTATGGGTAACTGATGCTAGGTCTCACCAGGATCTT | + |
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Preference number: 5 (lower is better) Translates to: GQRRRENEFKNALLN*PPLWVTDARSHQDL Trigger: AAGATCCTGGTGAGACCTAGCATCAGTTACCCATAGTGGTGGCCAATTCAATAAGGCATTTTTGAACTCATTCTCCCTCCTTCTCTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS GCA 90 bp | TCTGGGAAATCTAATCAAAACTGCTCAGACTTTCCTTTTCTTGTTTaGTTTAGAAGACAGCTTGCTGGAAGGGTTCTGTGGAGGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SGKSNQNCSDFPFLV*FRRQLAGRVLWRSP Trigger: GGGAGACCTCCACAGAACCCTTCCAGCAAGCTGTCTTCTAAAGCAAACAAGAAAAGGAAAGTCTGAGCAGTTTTGATTAGATTTCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000499346.7 ENST00000514409.6 ENST00000657475.1 ENST00000661296.1 |
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| CDS GCA 90 bp | AATGTTTGGGGCTTAGGTGACTGTTGTCCAGTTGTATCAACAAGATaGTGGTCCAAACCTATTATAGCAGCTTCTAGAGCAAGACATGGC | + |
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Preference number: 5 (lower is better) Translates to: NVWGLGDCCPVVSTR*WSKPIIAASRARHG Trigger: GCCATGTCTTGCTCTAGAAGCTGCTATAATAGGTTTGGACCAGCATCTTGTTGATACAACTGGACAACAGTCACCTAAGCCCCAAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS CCA 90 bp | AGAAGACCGCTTGCACAGCATTTTCAAACAGTTCTGCCAACTCTGTaGCTCTTTCATCATGTTTCAAGTGTTCAGCAAACGATGGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: RRPLAQHFQTVLPTL*LFHHVSSVQQTMVF Trigger: GAACACCATCGTTTGCTGAACACTTGAAACATGATGAAAGAGCCACAGAGTTGGCAGAACTGTTTGAAAATGCTGTGCAAGCGGTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000501652.5 ENST00000655628.1 ENST00000660180.1 ENST00000661296.1 ENST00000668265.1 |
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| CDS CCA 90 bp | GAGGGCTCCACTGTCCAAAGGCCCTTCCATCAACTACTATCACATTaGGATTATAGTTTCAACATACGAAATTTGGGAAGCACACAAGCA | + |
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Preference number: 5 (lower is better) Translates to: EGSTVQRPFHQLLSH*DYSFNIRNLGSTQA Trigger: TGCTTGTGTGCTTCCCAAATTTCGTATGTTGAAACTATAATCCCAATGTGATAGTAGTTGATGGAAGGGCCTTTGGACAGTGGAGCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 90 bp | CACCCACCTCTCAGCCTCAACACTACCTCAACACATCATCTGTGTTaGAACCAAGAAAATTTCATCATGCCACTTACACTAAGGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: HPPLSLNTTSTHHLC*NQENFIMPLTLRDS Trigger: TGAATCCCTTAGTGTAAGTGGCATGATGAAATTTTCTTGGTTTCAACACAGATGATGTGTTGAGGTAGTGTTGAGGCTGAGAGGTGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS TCA 90 bp | ATTTGGCTTTGTCTGGTTGGTCCTGAGTTAAAAGCTGACAGTCATTaGCCAAGCACTGACACTTCAGAACCAATTGTATCAGAGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: IWLCLVGPELKADSH*PSTDTSEPIVSELV Trigger: CACAAGCTCTGATACAATTGGTTCTGAAGTGTCAGTGCTTGGTCAATGACTGTCAGCTTTTAACTCAGGACCAACCAGACAAAGCCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS TCA 90 bp | CAATTGGAAACTTGGTTTGGGAAGCTAGAGGTGGGTAATTACAAGTaGGCCATCTTATGTGATTGGTTTGGGGAGTACATTTGGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: QLETWFGKLEVGNYK*AILCDWFGEYIWLC Trigger: ACAAAGCCAAATGTACTCCCCAAACCAATCACATAAGATGGCTCACTTGTAATTACCCACCTCTAGCTTCCCAAACCAAGTTTCCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 90 bp | AGAGTTCATGAGACCCTTTTATGTCAAACTCTCTTTGCTAAGATATaGATCATCAGTCATTCAGAAGTCAGGCCCCTTCCTGACTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: RVHETLLCQTLFAKI*IISHSEVRPLPDLS Trigger: AGACAAGTCAGGAAGGGGCCTGACTTCTGAATGACTGATGATCCATATCTTAGCAAAGAGAGTTTGACATAAAAGGGTCTCATGAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CCA 90 bp | TTGGTTGAGTCTGTGGCACTGGTTTGTTTAACTGAGCTTCTGCCTTaGTCCTGTTTTTCATTCTATTCCGATACCCCAAGAGAAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: LVESVALVCLTELLP*SCFSFYSDTPREMN Trigger: ATTCATTTCTCTTGGGGTATCGGAATAGAATGAAAAACAGGACCAAGGCAGAAGCTCAGTTAAACAAACCAGTGCCACAGACTCAACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 90 bp | AAAACAAAGACATGGGAAGTTGTAGGTAAATGTTTGGGGCTTAGGTaGCTGTTGTCCAGTTGTATCAACAAGATGCTGGTCCAAACCTAT | + |
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Preference number: 5 (lower is better) Translates to: KTKTWEVVGKCLGLR*LLSSCINKMLVQTY Trigger: ATAGGTTTGGACCAGCATCTTGTTGATACAACTGGACAACAGTCACCTAAGCCCCAAACATTTACCTACAACTTCCCATGTCTTTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS GCA 90 bp | ATCATATTTCCCAAGGCTGCCAAACTAGTTCCTTCTTCCATATTGTaGCAAGCTATTTGGCCAGCTACATGGACAGTGACCTTATTTTAT | + |
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Preference number: 5 (lower is better) Translates to: IIFPKAAKLVPSSIL*QAIWPATWTVTLFY Trigger: ATAAAATAAGGTCACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAGGAACTAGTTTGGCAGCCTTGGGAAATATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CCA 90 bp | GGACTAATGGCTTGGCTACGATTGCTACTTGGATCTGCTCAGTTCTaGTTAGCAACACTTGAAAGATTCTTCTTGTCTTGGATTATTAAT | + |
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Preference number: 5 (lower is better) Translates to: GLMAWLRLLLGSAQF*LATLERFFLSWIIN Trigger: ATTAATAATCCAAGACAAGAAGAATCTTTCAAGTGTTGCTAACCAGAACTGAGCAGATCCAAGTAGCAATCGTAGCCAAGCCATTAGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606855.1 |
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| CDS CCA 90 bp | AAGGCTGCCAAACTAGTTCCTTCTTCCATATTGTGCCAAGCTATTTaGCCAGCTACATGGACAGTGACCTTATTTTATTCAAGTATACTA | + |
|
Preference number: 5 (lower is better) Translates to: KAAKLVPSSILCQAI*PATWTVTLFYSSIL Trigger: TAGTATACTTGAATAAAATAAGGTCACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAGGAACTAGTTTGGCAGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 90 bp | TGTGTATGGGCAATGAGCTATCAGCCAACTACAATTACTAGGTTATaGGTTCTTGGATGGAAAGGAATATGCCTACTTTGTCTAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: CVWAMSYQPTTITRL*VLGWKGICLLCLTM Trigger: CATTGTTAGACAAAGTAGGCATATTCCTTTCCATCCAAGAACTCATAACCTAGTAATTGTAGTTGGCTGATAGCTCATTGCCCATACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS TCA 90 bp | CTTCTTCCATATTGTGCCAAGCTATTTGGCCAGCTACATGGACAGTaGCCTTATTTTATTCAAGTATACTACAGAATCAGTGAGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLPYCAKLFGQLHGQ*PYFIQVYYRISEWF Trigger: AAACCACTCACTGATTCTGTAGTATACTTGAATAAAATAAGGTCACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CCA 90 bp | ATCAACTACTATCACATTGGGATTATAGTTTCAACATACGAAATTTaGGAAGCACACAAGCATTCACTCCATTGCACAAATCTTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: INYYHIGIIVSTYEI*EAHKHSLHCTNLLT Trigger: GGTCAGAAGATTTGTGCAATGGAGTGAATGCTTGTGTGCTTCCCAAATTTCGTATGTTGAAACTATAATCCCAATGTGATAGTAGTTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CCA 90 bp | AGGAATGATATTTGGTGGCACAGGCAAGAAAAGTCCATCCTTATCTaGTTATTGAAAATCAGGAATATGCTATCATTTGGAGTACAAATG | + |
|
Preference number: 5 (lower is better) Translates to: RNDIWWHRQEKSILI*LLKIRNMLSFGVQM Trigger: CATTTGTACTCCAAATGATAGCATATTCCTGATTTTCAATAACCAGATAAGGATGGACTTTTCTTGCCTGTGCCACCAAATATCATTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 90 bp | ACATACCACATCCCATTTAATATAAACAACAACTCATCTTATGGATaGATACATGAAGGCTCAGAGACCACAAGTGACTTATATAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TYHIPFNINNNSSYG*IHEGSETTSDLYKV Trigger: GACCTTATATAAGTCACTTGTGGTCTCTGAGCCTTCATGTATTCATCCATAAGATGAGTTGTTGTTTATATTAAATGGGATGTGGTATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS GCA 72 bp | GACCGCTTGCACCTCGCCCGCGGCTCCGGAAGCGGCTaGGGCCCCGACCGGAAAGCCCCCAGCATCGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: DRLHLARGSGSG*GPDRKAPSIAR Trigger: TCGGGCGATGCTGGGGGCTTTCCGGTCGGGGCCGCAGCCGCTTCCGGAGCCGCGGGCGAGGTGCAAGCGGTC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000501702.7 ENST00000514409.6 ENST00000656563.1 |
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| CDS GCA 72 bp | AGCCCCCAGCATCGCCCGAAGGAATCGCGGCTGGCCTaGGGCTCCGGCCCGGCCTCGGGTACCACGCGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SPQHRPKESRLA*GSGPASGTTRL Trigger: TAGGCGCGTGGTACCCGAGGCCGGGCCGGAGCCGCAGGCCAGCCGCGATTCCTTCGGGCGATGCTGGGGGCT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000499346.7 ENST00000501702.7 ENST00000514409.6 ENST00000514573.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656563.1 ENST00000663841.1 ENST00000664006.1 ENST00000668567.1 |
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| CDS CCA 72 bp | TCGCGGCGGCGGGTCAGAGCCCAGAGCAAACCAGGCTaGGGAACGCACCTCGCCCGCGGCTCCGGAAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRRVRAQSKPG*GTHLARGSGSG Trigger: GCCGCTTCCGGAGCCGCGGGCGAGGTGCGTTCCCCAGCCTGGTTTGCTCTGGGCTCTGACCCGCCGCCGCGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS GCA 72 bp | ATGGTGAATCGACTCGCCCGCGGCTCCGGAAGCGGCTaGGGCCCCGACCGGAAAGCCCCCAGCATCGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: MVNRLARGSGSG*GPDRKAPSIAR Trigger: TCGGGCGATGCTGGGGGCTTTCCGGTCGGGGCCGCAGCCGCTTCCGGAGCCGCGGGCGAGTCGATTCACCAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000514573.5 |
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| CDS TCA 72 bp | CCTGGAGTTGGGCCGCCCAGGGGCTGGACTCCGCTCTaGCTGCCCCGAGCCAAACATCTCTCGGTGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PGVGPPRGWTPL*LPRAKHLSVSR Trigger: TCTGGACACCGAGAGATGTTTGGCTCGGGGCAGTCAGAGCGGAGTCCAGCCCCTGGGCGGCCCAACTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS TCA 72 bp | GGCCTCGGGTACCACGCGCCTAGTGGGAAGCCGCACTaGCGCCTGCAGCATCTCGCGAGATTTCGGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLGYHAPSGKPH*RLQHLARFRAQ Trigger: CTGAGCCCGAAATCTCGCGAGATGCTGCAGGCGTCAGTGCGGCTTCCCACTAGGCGCGTGGTACCCGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654888.1 |
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| CDS GCA 72 bp | GAGTTGGGCCGCCCAGGGGCTGGACTCCGCTCTGACTaGCCCGAGCCAAACATCTCTCGGTGTCCAGACGTC | + |
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Preference number: 6 (lower is better) Translates to: ELGRPGAGLRSD*PEPNISRCPDV Trigger: GACGTCTGGACACCGAGAGATGTTTGGCTCGGGGCAGTCAGAGCGGAGTCCAGCCCCTGGGCGGCCCAACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS GCA 72 bp | GGTACCACGCGCCTAGTGGGAAGCCGCACTGACGCCTaGAGCATCTCGCGAGATTTCGGGCTCAGCCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GTTRLVGSRTDA*SISRDFGLSPS Trigger: ACTTGGGCTGAGCCCGAAATCTCGCGAGATGCTGCAGGCGTCAGTGCGGCTTCCCACTAGGCGCGTGGTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654888.1 |
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| CDS CAA 72 bp | GGATGGATGAAGTGGGAAGGTGATCTTCCCCTGGAGTaGGGCCGCCCAGGGGCTGGACTCCGCTCTGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GWMKWEGDLPLE*GRPGAGLRSDC Trigger: GCAGTCAGAGCGGAGTCCAGCCCCTGGGCGGCCCAACTCCAGGGGAAGATCACCTTCCCACTTCATCCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000501652.5 ENST00000660408.1 |
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| CDS GCA 72 bp | GGTCTGCCTGGCAGGGTGAGTCTACCGCTCGAAAGCTaGACAGAGGAAATCCTCCCTCCTCCAGGTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GLPGRVSLPLES*TEEILPPPGSG Trigger: GCCTGAACCTGGAGGAGGGAGGATTTCCTCTGTGCAGCTTTCGAGCGGTAGACTCACCCTGCCAGGCAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS GCA 72 bp | GAAACGGAAGAGTTCCCTGATTCCCCTTGCAGGGCGTaGGACAGGGGTGTGGCTCACCTGTTCAGTAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ETEEFPDSPCRA*DRGVAHLFSSP Trigger: GGGGCTACTGAACAGGTGAGCCACACCCCTGTCGCACGCCCTGCAAGGGGAATCAGGGAACTCTTCCGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000501652.5 ENST00000660408.1 |
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| CDS TCA 72 bp | CTGCCAAGGGCTACACTGACTCTGGTCGAGTGCTCCTaGAGCTTGAGGCATCACCACGTGGGGATGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPRATLTLVECS*SLRHHHVGMPS Trigger: AGAGGGCATCCCCACGTGGTGATGCCTCAAGCTTCAGGAGCACTCGACCAGAGTCAGTGTAGCCCTTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000606855.1 |
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| CDS GCA 72 bp | TCGGTGTCCAGACGTCCCTCCTCTTCTCTCTTTCTCTaGTACGTCGTTTTGCCGTCAGTCGGCTTGCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SVSRRPSSSLFL*YVVLPSVGLPR Trigger: ACGAGGCAAGCCGACTGACGGCAAAACGACGTAGCAGAGAAAGAGAGAAGAGGAGGGACGTCTGGACACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS GCA 72 bp | CAAAGCAATGAAACGGAAGAGTTCCCTGATTCCCCTTaGAGGGCGTGCGACAGGGGTGTGGCTCACCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QSNETEEFPDSP*RACDRGVAHLF Trigger: GAACAGGTGAGCCACACCCCTGTCGCACGCCCTGCAAGGGGAATCAGGGAACTCTTCCGTTTCATTGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000501652.5 ENST00000660408.1 |
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| CDS CCA 72 bp | CTCGTATCTCCTCACCTGCTGGTATGCTCTGGAGGTTaGGGTTTGGGGTTTATATGGGGGCAGGATAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: LVSPHLLVCSGG*GLGFIWGQDRG Trigger: CCCCCTATCCTGCCCCCATATAAACCCCAAACCCCAACCTCCAGAGCATACCAGCAGGTGAGGAGATACGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000514573.5 ENST00000660408.1 |
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| CDS CAA 90 bp | TCCTCTTCTCTCTTTCTCTGCTACGTCGTTTTGCCGTCAGTCGGCTaGCCTCGTATCTCCTCACCTGCTGGTATGCTCTGGAGGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SSSLFLCYVVLPSVG*PRISSPAGMLWRLG Trigger: CCCCAACCTCCAGAGCATACCAGCAGGTGAGGAGATACGAGGCAAGCCGACTGACGGCAAAACGACGTAGCAGAGAAAGAGAGAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS CAA 90 bp | GTGTCCAGACGTCCCTCCTCTTCTCTCTTTCTCTGCTACGTCGTTTaGCCGTCAGTCGGCTTGCCTCGTATCTCCTCACCTGCTGGTATG | + |
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Preference number: 6 (lower is better) Translates to: VSRRPSSSLFLCYVV*PSVGLPRISSPAGM Trigger: CATACCAGCAGGTGAGGAGATACGAGGCAAGCCGACTGACGGCAAAACGACGTAGCAGAGAAAGAGAGAAGAGGAGGGACGTCTGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS TCA 72 bp | TGGAGACTGAAGTCTGAGTTCACGGTGCTAGAACGGTaGGGGACTGGTGAGGGTCCTCTTCTGGTTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: WRLKSEFTVLER*GTGEGPLLVAD Trigger: GTCTGCAACCAGAAGAGGACCCTCACCAGTCCCTCACCGTTCTAGCACCGTGAACTCAGACTTCAGTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS GCA 72 bp | GTCCCTCCTCTTCTCTCTTTCTCTGCTACGTCGTTTTaGCGTCAGTCGGCTTGCCTCGTATCTCCTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: VPPLLSFSATSF*RQSACLVSPHL Trigger: CAGGTGAGGAGATACGAGGCAAGCCGACTGACGGCAAAACGACGTAGCAGAGAAAGAGAGAAGAGGAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS CAA 72 bp | CGTCCCTCCTCTTCTCTCTTTCTCTGCTACGTCGTTTaGCCGTCAGTCGGCTTGCCTCGTATCTCCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: RPSSSLFLCYVV*PSVGLPRISSP Trigger: AGGTGAGGAGATACGAGGCAAGCCGACTGACGGCAAAACGACGTAGCAGAGAAAGAGAGAAGAGGAGGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501173.6 ENST00000501652.5 ENST00000660408.1 |
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| CDS CCA 72 bp | GGAACTGATCTCTGGTTATGCCAATCTAGGTCTGCCTaGCAGGGTGAGTCTACCGCTCGAAAGCTGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GTDLWLCQSRSA*QGESTARKLHR Trigger: TCTGTGCAGCTTTCGAGCGGTAGACTCACCCTGCCAGGCAGACCTAGATTGGCATAACCAGAGATCAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508353.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS CAA 72 bp | GTGCCTGCAACCCCAGTGTTACAAAGCTCTTTCAGCTaGGCCACCACAGACAGCTGGAGTGTTAACCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPATPVLQSSFS*ATTDSWSVNQL Trigger: GAGCTGGTTAACACTCCAGCTGTCTGTGGTGGCCAAGCTGAAAGAGCTTTGTAACACTGGGGTTGCAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000501652.5 ENST00000657475.1 ENST00000660408.1 |
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| CDS GCA 72 bp | ACCCACTGCATCACAACTGGAACTGATCTCTGGTTATaGCAATCTAGGTCTGCCTGGCAGGGTGAGTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: THCITTGTDLWL*QSRSAWQGEST Trigger: GGTAGACTCACCCTGCCAGGCAGACCTAGATTGGCATAACCAGAGATCAGTTCCAGTTGTGATGCAGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508353.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS CCA 72 bp | GTAGACACCCACTGCATCACAACTGGAACTGATCTCTaGTTATGCCAATCTAGGTCTGCCTGGCAGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VDTHCITTGTDL*LCQSRSAWQGE Trigger: CTCACCCTGCCAGGCAGACCTAGATTGGCATAACCAGAGATCAGTTCCAGTTGTGATGCAGTGGGTGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000499346.7 ENST00000501173.6 ENST00000501652.5 ENST00000508353.5 ENST00000508878.5 ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000657683.1 ENST00000659990.1 ENST00000660180.1 ENST00000661552.1 ENST00000663841.1 ENST00000663976.1 ENST00000668567.1 |
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| CDS CCA 72 bp | GCCCTCTCTGGTCTCTCCATACATGGACTAATGGCTTaGCTACGATTGCTACTTGGATCTGCTCAGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ALSGLSIHGLMA*LRLLLGSAQFW Trigger: CCAGAACTGAGCAGATCCAAGTAGCAATCGTAGCCAAGCCATTAGTCCATGTATGGAGAGACCAGAGAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000606855.1 |
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| CDS CAA 72 bp | CAAGCACTGACACTTCAGAACCAATTGTATCAGAGCTaGTGGTTTGGCTTCCCAGGCTGGTTGCTGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QALTLQNQLYQS*WFGFPGWLLQR Trigger: CCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTGGTTCTGAAGTGTCAGTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CAA 90 bp | GTCATTGACCAAGCACTGACACTTCAGAACCAATTGTATCAGAGCTaGTGGTTTGGCTTCCCAGGCTGGTTGCTGCAGAGGTTGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VIDQALTLQNQLYQS*WFGFPGWLLQRLCV Trigger: GACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTGGTTCTGAAGTGTCAGTGCTTGGTCAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 72 bp | CAATTGTATCAGAGCTTGTGGTTTGGCTTCCCAGGCTaGTTGCTGCAGAGGTTGTGTGTCCGAGTTCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: QLYQSLWFGFPG*LLQRLCVRVLL Trigger: CAATAGAACTCGGACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 72 bp | GACACTTCAGAACCAATTGTATCAGAGCTTGTGGTTTaGCTTCCCAGGCTGGTTGCTGCAGAGGTTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DTSEPIVSELVV*LPRLVAAEVVC Trigger: ACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTGGTTCTGAAGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CAA 72 bp | GACAGAGAAGACCGCTTGCACCAGAAACCAATGCCGTaGAACTCCCAAACATGTTCCAACTTTGCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DREDRLHQKPMP*NSQTCSNFAQL Trigger: CAGCTGTGCAAAGTTGGAACATGTTTGGGAGTTCAACGGCATTGGTTTCTGGTGCAAGCGGTCTTCTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000501173.6 ENST00000606251.2 ENST00000663841.1 ENST00000663976.1 |
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| CDS CAA 72 bp | GAGAAGACCGCTTGCACCAACCAGAAACCAATGCCGTaGAACTCCCAAACATGTTCCAACTTTGCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EKTACTNQKPMP*NSQTCSNFAQL Trigger: CAGCTGTGCAAAGTTGGAACATGTTTGGGAGTTCAACGGCATTGGTTTCTGGTTGGTGCAAGCGGTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000514573.5 ENST00000657683.1 ENST00000659990.1 |
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| CDS CAA 72 bp | TTGTGGTTTGGCTTCCCAGGCTGGTTGCTGCAGAGGTaGTGTGTCCGAGTTCTATTGACATATATGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWFGFPGWLLQR*CVRVLLTYMVW Trigger: CCAGACCATATATGTCAATAGAACTCGGACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CAA 72 bp | TTGTATCAGAGCTTGTGGTTTGGCTTCCCAGGCTGGTaGCTGCAGAGGTTGTGTGTCCGAGTTCTATTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LYQSLWFGFPGW*LQRLCVRVLLT Trigger: TGTCAATAGAACTCGGACACACAACCTCTGCAGCAACCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CAA 72 bp | TGTTTTCTCCAGCTGCAGCTACTGGAGGCCTGTTGCTaGACTATTTCATGGCGGCTTATTTGTGGGCTACGA | + |
|
Preference number: 6 (lower is better) Translates to: CFLQLQLLEACC*TISWRLICGLR Trigger: TCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCCTCCAGTAGCTGCAGCTGGAGAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665599.1 |
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| CDS TCA 72 bp | TATGGTCCGTTGGTAGCAATATTCTGCCATGGGTCCTaGGTGAAACTGACAGCCCAACATGCCTCTCTTACT | + |
|
Preference number: 6 (lower is better) Translates to: YGPLVAIFCHGS*VKLTAQHASLT Trigger: AGTAAGAGAGGCATGTTGGGCTGTCAGTTTCACTCAGGACCCATGGCAGAATATTGCTACCAACGGACCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000665599.1 |
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| CDS CCA 72 bp | CTGCAGCTACTGGAGGCCTGTTGCTTGACTATTTCATaGCGGCTTATTTGTGGGCTACGACTGTTATGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: LQLLEACCLTIS*RLICGLRLLCL Trigger: TAGACATAACAGTCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCCTCCAGTAGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665599.1 |
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| CDS CAA 72 bp | CATTCAGAAGTCAGGCCCCTTCCTGACTTGTCTGTCTaGTGGACAATTGGCTTTATCCCAGTGAGTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HSEVRPLPDLSV*WTIGFIPVSSE Trigger: CTCAGAACTCACTGGGATAAAGCCAATTGTCCACAAGACAGACAAGTCAGGAAGGGGCCTGACTTCTGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 72 bp | ACAGTCATTGACCAAGCACTGACACTTCAGAACCAATaGTATCAGAGCTTGTGGTTTGGCTTCCCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVIDQALTLQNQ*YQSLWFGFPGW Trigger: CCAGCCTGGGAAGCCAAACCACAAGCTCTGATACAATTGGTTCTGAAGTGTCAGTGCTTGGTCAATGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
||
| CDS CAA 90 bp | AAAACTGCTCAGACTTTCCTTTTCTTGTTTGCTTTAGAAGACAGCTaGCTGGAAGGGTTCTGTGGAGGTCTCCCACCTGTAGTCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KTAQTFLFLFALEDS*LEGFCGGLPPVVPA Trigger: AGCTGGGACTACAGGTGGGAGACCTCCACAGAACCCTTCCAGCAAGCTGTCTTCTAAAGCAAACAAGAAAAGGAAAGTCTGAGCAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000499346.7 ENST00000514409.6 ENST00000661296.1 |
||
| CDS CAA 90 bp | GCCCTCTCTGGTCTCTCCATACATGGACTAATGGCTTGGCTACGATaGCTACTTGGATCTGCTCAGTTCTGGTTAGCAACACTTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALSGLSIHGLMAWLR*LLGSAQFWLATLER Trigger: TCTTTCAAGTGTTGCTAACCAGAACTGAGCAGATCCAAGTAGCAATCGTAGCCAAGCCATTAGTCCATGTATGGAGAGACCAGAGAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000606855.1 |
||
| CDS CAA 90 bp | CTTATCCAGTGTTTTCTCCAGCTGCAGCTACTGGAGGCCTGTTGCTaGACTATTTCATGGCGGCTTATTTGTGGGCTACGACTGTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: LIQCFLQLQLLEACC*TISWRLICGLRLLC Trigger: ACATAACAGTCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCCTCCAGTAGCTGCAGCTGGAGAAAACACTGGATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665599.1 |
||
| CDS CAA 90 bp | GATAGGATAGCTTGCATTACCCAGCTGCATTCTTTCTGGTTAGCCTaGACCTATCGGCTCATTGCTAAAGCTTCCATTTGTCCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DRIACITQLHSFWLA*TYRLIAKASICPRL Trigger: CAACCTGGGACAAATGGAAGCTTTAGCAATGAGCCGATAGGTCAAGGCTAACCAGAAAGAATGCAGCTGGGTAATGCAAGCTATCCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606855.1 |
||
| CDS CAA 90 bp | GCAGCTACTGGAGGCCTGTTGCTTGACTATTTCATGGCGGCTTATTaGTGGGCTACGACTGTTATGTCTAAAGGAAATCATGACTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AATGGLLLDYFMAAY*WATTVMSKGNHDFP Trigger: GGGAAAGTCATGATTTCCTTTAGACATAACAGTCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCCTCCAGTAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665599.1 |
||
| CDS CAA 90 bp | AGGCTAAACGCTACTATGGAGGAGAGACTAGATCTTGTGCAGAAATaGGATCACCTTATCCAGTGTTTTCTCCAGCTGCAGCTACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLNATMEERLDLVQK*DHLIQCFLQLQLLE Trigger: CTCCAGTAGCTGCAGCTGGAGAAAACACTGGATAAGGTGATCCAATTTCTGCACAAGATCTAGTCTCTCCTCCATAGTAGCGTTTAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665599.1 |
||
| CDS TCA 72 bp | ATGGATCATCAGTCATTCAGAAGTCAGGCCCCTTCCTaGCTTGTCTGTCTTGTGGACAATTGGCTTTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: MDHQSFRSQAPS*LVCLVDNWLYP Trigger: GGGATAAAGCCAATTGTCCACAAGACAGACAAGTCAGGAAGGGGCCTGACTTCTGAATGACTGATGATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 72 bp | CGTCTCTGTGATAGACATAGACAGGAAAGCAAGCACTaGAGTAGGCAGCACCACAGAGCTGTGTTAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: RLCDRHRQESKH*SRQHHRAVLKT Trigger: TGTCTTTAACACAGCTCTGTGGTGCTGCCTACTTCAGTGCTTGCTTTCCTGTCTATGTCTATCACAGAGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
||
| CDS CCA 72 bp | TTTTTGTTATGGTCCGTTGGTAGCAATATTCTGCCATaGGTCCTGAGTGAAACTGACAGCCCAACATGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLLWSVGSNILP*VLSETDSPTCL Trigger: GAGGCATGTTGGGCTGTCAGTTTCACTCAGGACCCATGGCAGAATATTGCTACCAACGGACCATAACAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512185.1 ENST00000665599.1 |
||
| CDS CAA 72 bp | TCACACACGGACTTGAAGGATGAATGCGAGGTTTTATaGAGTGGTGGAAATGGCTTTCAGCAGGATGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SHTDLKDECEVL*SGGNGFQQDGW Trigger: CCATCCATCCTGCTGAAAGCCATTTCCACCACTCAATAAAACCTCGCATTCATCCTTCAAGTCCGTGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501652.5 ENST00000660408.1 |
||
| CDS CAA 72 bp | TTTCCCAAGGCTGCCAAACTAGTTCCTTCTTCCATATaGTGCCAAGCTATTTGGCCAGCTACATGGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPKAAKLVPSSI*CQAIWPATWTV Trigger: CACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAGGAACTAGTTTGGCAGCCTTGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
||
| CDS CAA 72 bp | ATCATCAGTCATTCAGAAGTCAGGCCCCTTCCTGACTaGTCTGTCTTGTGGACAATTGGCTTTATCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: IISHSEVRPLPD*SVLWTIGFIPV Trigger: CACTGGGATAAAGCCAATTGTCCACAAGACAGACAAGTCAGGAAGGGGCCTGACTTCTGAATGACTGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
||
| CDS CAA 90 bp | AAGATATGGATCATCAGTCATTCAGAAGTCAGGCCCCTTCCTGACTaGTCTGTCTTGTGGACAATTGGCTTTATCCCAGTGAGTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KIWIISHSEVRPLPD*SVLWTIGFIPVSSE Trigger: CTCAGAACTCACTGGGATAAAGCCAATTGTCCACAAGACAGACAAGTCAGGAAGGGGCCTGACTTCTGAATGACTGATGATCCATATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
||
| CDS CAA 90 bp | AGAGTAGGACAGAGAAGGAGGGAGAATGAGTTCAAAAATGCCTTATaGAATTGGCCACCACTATGGGTAACTGATGCTAGGTCTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVGQRRRENEFKNAL*NWPPLWVTDARSHQ Trigger: CTGGTGAGACCTAGCATCAGTTACCCATAGTGGTGGCCAATTCAATAAGGCATTTTTGAACTCATTCTCCCTCCTTCTCTGTCCTACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS GCA 72 bp | GGAAAAATCGGGTCACACACGGACTTGAAGGATGAATaGGAGGTTTTATTGAGTGGTGGAAATGGCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GKIGSHTDLKDE*EVLLSGGNGFQ Trigger: CTGAAAGCCATTTCCACCACTCAATAAAACCTCGCATTCATCCTTCAAGTCCGTGTGTGACCCGATTTTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000501652.5 ENST00000657475.1 ENST00000660408.1 |
||
| CDS CCA 72 bp | GATAGGATAGCTTGCATTACCCAGCTGCATTCTTTCTaGTTAGCCTTGACCTATCGGCTCATTGCTAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DRIACITQLHSF*LALTYRLIAKA Trigger: AGCTTTAGCAATGAGCCGATAGGTCAAGGCTAACCAGAAAGAATGCAGCTGGGTAATGCAAGCTATCCTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606855.1 |
||
| CDS CAA 72 bp | GCTTGCATTACCCAGCTGCATTCTTTCTGGTTAGCCTaGACCTATCGGCTCATTGCTAAAGCTTCCATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ACITQLHSFWLA*TYRLIAKASIC Trigger: ACAAATGGAAGCTTTAGCAATGAGCCGATAGGTCAAGGCTAACCAGAAAGAATGCAGCTGGGTAATGCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000606855.1 |
||
| CDS CAA 90 bp | TTCCACATGGCTCCTGCTCCTTCTAGTCCTTATAATTCTTTCCTATaGGGGCCCAACTTCTTCATTTACATGGCTCTTATCTCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FHMAPAPSSPYNSFL*GPNFFIYMALISGF Trigger: GAAGCCAGAGATAAGAGCCATGTAAATGAAGAAGTTGGGCCCCAATAGGAAAGAATTATAAGGACTAGAAGGAGCAGGAGCCATGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS TCA 72 bp | ACATGGGAAGTTGTAGGTAAATGTTTGGGGCTTAGGTaGCTGTTGTCCAGTTGTATCAACAAGATGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TWEVVGKCLGLR*LLSSCINKMLV Trigger: GACCAGCATCTTGTTGATACAACTGGACAACAGTCACCTAAGCCCCAAACATTTACCTACAACTTCCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656154.1 |
||
| CDS GCA 72 bp | GGCTTAGGTGACTGTTGTCCAGTTGTATCAACAAGATaGTGGTCCAAACCTATTATAGCAGCTTCTAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLGDCCPVVSTR*WSKPIIAASRA Trigger: TGCTCTAGAAGCTGCTATAATAGGTTTGGACCAGCATCTTGTTGATACAACTGGACAACAGTCACCTAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656154.1 |
||
| CDS CCA 72 bp | GCTTGGCTACGATTGCTACTTGGATCTGCTCAGTTCTaGTTAGCAACACTTGAAAGATTCTTCTTGTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AWLRLLLGSAQF*LATLERFFLSW Trigger: CCAAGACAAGAAGAATCTTTCAAGTGTTGCTAACCAGAACTGAGCAGATCCAAGTAGCAATCGTAGCCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000512185.1 ENST00000606855.1 ENST00000665599.1 |
||
| CDS CCA 72 bp | TCTGTGGCACTGGTTTGTTTAACTGAGCTTCTGCCTTaGTCCTGTTTTTCATTCTATTCCGATACCCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVALVCLTELLP*SCFSFYSDTPR Trigger: TCTTGGGGTATCGGAATAGAATGAAAAACAGGACCAAGGCAGAAGCTCAGTTAAACAAACCAGTGCCACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CCA 72 bp | ACTAAAACAAGGGAGTCAAACACCATCGCTTGTGTTTaGCAGATACTCACAGGCAGCCAAAGCAGAAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: TKTRESNTIACV*QILTGSQSRNE Trigger: TTCATTTCTGCTTTGGCTGCCTGTGAGTATCTGCCAAACACAAGCGATGGTGTTTGACTCCCTTGTTTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 72 bp | GGCCTGTTGCTTGACTATTTCATGGCGGCTTATTTGTaGGCTACGACTGTTATGTCTAAAGGAAATCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLLLDYFMAAYL*ATTVMSKGNHD Trigger: GTCATGATTTCCTTTAGACATAACAGTCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665599.1 |
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| CDS CAA 72 bp | GGAGGCCTGTTGCTTGACTATTTCATGGCGGCTTATTaGTGGGCTACGACTGTTATGTCTAAAGGAAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGLLLDYFMAAY*WATTVMSKGNH Trigger: ATGATTTCCTTTAGACATAACAGTCGTAGCCCACAAATAAGCCGCCATGAAATAGTCAAGCAACAGGCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665599.1 |
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| CDS CAA 72 bp | CAGAGAAGGAGGGAGAATGAGTTCAAAAATGCCTTATaGAATTGGCCACCACTATGGGTAACTGATGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QRRRENEFKNAL*NWPPLWVTDAR Trigger: CCTAGCATCAGTTACCCATAGTGGTGGCCAATTCAATAAGGCATTTTTGAACTCATTCTCCCTCCTTCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS CAA 90 bp | CTGCCTTACCTAGAGTTCATGAGACCCTTTTATGTCAAACTCTCTTaGCTAAGATATGGATCATCAGTCATTCAGAAGTCAGGCCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPYLEFMRPFYVKLS*LRYGSSVIQKSGPF Trigger: GAAGGGGCCTGACTTCTGAATGACTGATGATCCATATCTTAGCAAAGAGAGTTTGACATAAAAGGGTCTCATGAACTCTAGGTAAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 72 bp | TGTCTGGTTGGTCCTGAGTTAAAAGCTGACAGTCATTaGCCAAGCACTGACACTTCAGAACCAATTGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: CLVGPELKADSH*PSTDTSEPIVS Trigger: TGATACAATTGGTTCTGAAGTGTCAGTGCTTGGTCAATGACTGTCAGCTTTTAACTCAGGACCAACCAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS TCA 72 bp | ACTTGGTTTGGGAAGCTAGAGGTGGGTAATTACAAGTaGGCCATCTTATGTGATTGGTTTGGGGAGTACATT | + |
|
Preference number: 6 (lower is better) Translates to: TWFGKLEVGNYK*AILCDWFGEYI Trigger: AATGTACTCCCCAAACCAATCACATAAGATGGCTCACTTGTAATTACCCACCTCTAGCTTCCCAAACCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 72 bp | GAGACCCTTTTATGTCAAACTCTCTTTGCTAAGATATaGATCATCAGTCATTCAGAAGTCAGGCCCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ETLLCQTLFAKI*IISHSEVRPLP Trigger: AGGAAGGGGCCTGACTTCTGAATGACTGATGATCCATATCTTAGCAAAGAGAGTTTGACATAAAAGGGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 72 bp | GCTCCTGCTCCTTCTAGTCCTTATAATTCTTTCCTATaGGGGCCCAACTTCTTCATTTACATGGCTCTTATC | + |
|
Preference number: 6 (lower is better) Translates to: APAPSSPYNSFL*GPNFFIYMALI Trigger: GATAAGAGCCATGTAAATGAAGAAGTTGGGCCCCAATAGGAAAGAATTATAAGGACTAGAAGGAGCAGGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS CAA 72 bp | ATAAACAGGACATTTACCAACCAGAAACCAATGCCGTaGAACTCCCAAACATGTTCCAACTTTGCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: INRTFTNQKPMP*NSQTCSNFAQL Trigger: CAGCTGTGCAAAGTTGGAACATGTTTGGGAGTTCAACGGCATTGGTTTCTGGTTGGTAAATGTCCTGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS GCA 72 bp | TCTAATCAAAACTGCTCAGACTTTCCTTTTCTTGTTTaGTTTAGAAGACAGCTTGCTGGAAGGGTTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SNQNCSDFPFLV*FRRQLAGRVLW Trigger: CCACAGAACCCTTCCAGCAAGCTGTCTTCTAAAGCAAACAAGAAAAGGAAAGTCTGAGCAGTTTTGATTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000499346.7 ENST00000514409.6 ENST00000657475.1 ENST00000661296.1 |
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| CDS CCA 72 bp | CTCCTGCTCCTTCTAGTCCTTATAATTCTTTCCTATTaGGGCCCAACTTCTTCATTTACATGGCTCTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLLLVLIILSY*GPTSSFTWLLS Trigger: AGATAAGAGCCATGTAAATGAAGAAGTTGGGCCCCAATAGGAAAGAATTATAAGGACTAGAAGGAGCAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS CCA 72 bp | TTAGGTGACTGTTGTCCAGTTGTATCAACAAGATGCTaGTCCAAACCTATTATAGCAGCTTCTAGAGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGDCCPVVSTRC*SKPIIAASRAR Trigger: TCTTGCTCTAGAAGCTGCTATAATAGGTTTGGACCAGCATCTTGTTGATACAACTGGACAACAGTCACCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS CCA 72 bp | GAGTTCAAAAATGCCTTATTGAATTGGCCACCACTATaGGTAACTGATGCTAGGTCTCACCAGGATCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: EFKNALLNWPPL*VTDARSHQDLI Trigger: TATAAGATCCTGGTGAGACCTAGCATCAGTTACCCATAGTGGTGGCCAATTCAATAAGGCATTTTTGAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS CAA 90 bp | CAAGGCTGCCAAACTAGTTCCTTCTTCCATATTGTGCCAAGCTATTaGGCCAGCTACATGGACAGTGACCTTATTTTATTCAAGTATACT | + |
|
Preference number: 6 (lower is better) Translates to: QGCQTSSFFHIVPSY*ASYMDSDLILFKYT Trigger: AGTATACTTGAATAAAATAAGGTCACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAGGAACTAGTTTGGCAGCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 90 bp | ATAATCATATTTCCCAAGGCTGCCAAACTAGTTCCTTCTTCCATATaGTGCCAAGCTATTTGGCCAGCTACATGGACAGTGACCTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: IIIFPKAAKLVPSSI*CQAIWPATWTVTLF Trigger: AAATAAGGTCACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAGGAACTAGTTTGGCAGCCTTGGGAAATATGATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 90 bp | CAGAGGTTGTGTGTCCGAGTTCTATTGACATATATGGTCTGGTCCTaGTCCGTTTGTATATTTAGTCTATCAGTATGCACCAAACTAACA | + |
|
Preference number: 6 (lower is better) Translates to: QRLCVRVLLTYMVWS*SVCIFSLSVCTKLT Trigger: TGTTAGTTTGGTGCATACTGATAGACTAAATATACAAACGGACAAGGACCAGACCATATATGTCAATAGAACTCGGACACACAACCTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CCA 72 bp | ATCTGTATGGGAAATACCATGCTAATAGAGTTTTCCTaGATCACCTCAAATTGCATCCTTGCCGACTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ICMGNTMLIEFS*ITSNCILADSK Trigger: TTTAGAGTCGGCAAGGATGCAATTTGAGGTGATCCAGGAAAACTCTATTAGCATGGTATTTCCCATACAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499346.7 ENST00000514409.6 ENST00000661296.1 |
||
| CDS CCA 72 bp | ATTCTTTCCTATTGGGGCCCAACTTCTTCATTTACATaGCTCTTATCTCTGGCTTCCAGCTTATACATTACT | + |
|
Preference number: 6 (lower is better) Translates to: ILSYWGPTSSFT*LLSLASSLYIT Trigger: AGTAATGTATAAGCTGGAAGCCAGAGATAAGAGCCATGTAAATGAAGAAGTTGGGCCCCAATAGGAAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS CCA 72 bp | ACTGTCCAAAGGCCCTTCCATCAACTACTATCACATTaGGATTATAGTTTCAACATACGAAATTTGGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVQRPFHQLLSH*DYSFNIRNLGS Trigger: GCTTCCCAAATTTCGTATGTTGAAACTATAATCCCAATGTGATAGTAGTTGATGGAAGGGCCTTTGGACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 72 bp | CAAACTAGTTCCTTCTTCCATATTGTGCCAAGCTATTaGGCCAGCTACATGGACAGTGACCTTATTTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: QTSSFFHIVPSY*ASYMDSDLILF Trigger: GAATAAAATAAGGTCACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAGGAACTAGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 72 bp | GCAATGAGCTATCAGCCAACTACAATTACTAGGTTATaGGTTCTTGGATGGAAAGGAATATGCCTACTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: AMSYQPTTITRL*VLGWKGICLLC Trigger: ACAAAGTAGGCATATTCCTTTCCATCCAAGAACTCATAACCTAGTAATTGTAGTTGGCTGATAGCTCATTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS GCA 72 bp | TGGTCCTTGTCCGTTTGTATATTTAGTCTATCAGTATaGACCAAACTAACATTAGTGGTTACTACTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WSLSVCIFSLSV*TKLTLVVTTGK Trigger: CTTGCCAGTAGTAACCACTAATGTTAGTTTGGTGCATACTGATAGACTAAATATACAAACGGACAAGGACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665302.1 |
||
| CDS CCA 72 bp | ATGTTTATTCAAGAGGTTGTGTTAGATCCTTGTGTATaGGCAATGAGCTATCAGCCAACTACAATTACTAGG | + |
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Preference number: 6 (lower is better) Translates to: MFIQEVVLDPCV*AMSYQPTTITR Trigger: CCTAGTAATTGTAGTTGGCTGATAGCTCATTGCCCATACACAAGGATCTAACACAACCTCTTGAATAAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS CCA 72 bp | AAACTAGTTCCTTCTTCCATATTGTGCCAAGCTATTTaGCCAGCTACATGGACAGTGACCTTATTTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: KLVPSSILCQAI*PATWTVTLFYS Trigger: TGAATAAAATAAGGTCACTGTCCATGTAGCTGGCCAAATAGCTTGGCACAATATGGAAGAAGGAACTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 90 bp | TTCATCGTCCTGGTTTACATGTTATCTACTGATATTCCTCCATTTTaGTGTAGTTCCACTTTCTACTTAAGTACGTGTCAGGGCTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: FIVLVYMLSTDIPPF*CSSTFYLSTCQGCY Trigger: ATAACAGCCCTGACACGTACTTAAGTAGAAAGTGGAACTACACAAAAATGGAGGAATATCAGTAGATAACATGTAAACCAGGACGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665599.1 |
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| CDS TCA 72 bp | GGCACAGGCAAGAAAAGTCCATCCTTATCTGGTTATTaGAAATCAGGAATATGCTATCATTTGGAGTACAAA | + |
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Preference number: 6 (lower is better) Translates to: GTGKKSPSLSGY*KSGICYHLEYK Trigger: TTTGTACTCCAAATGATAGCATATTCCTGATTTTCAATAACCAGATAAGGATGGACTTTTCTTGCCTGTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS GCA 72 bp | ACCCAAAATGAGAACAATCAGAGGCTATTTATTCATTaGTTACTAAAACAAGGGAGTCAAACACCATCGCTT | + |
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Preference number: 6 (lower is better) Translates to: TQNENNQRLFIH*LLKQGSQTPSL Trigger: AAGCGATGGTGTTTGACTCCCTTGTTTTAGTAAGCAATGAATAAATAGCCTCTGATTGTTCTCATTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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| CDS CAA 72 bp | CTATCACATTGGGATTATAGTTTCAACATACGAAATTaGGGAAGCACACAAGCATTCACTCCATTGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LSHWDYSFNIRN*GSTQAFTPLHK Trigger: TTTGTGCAATGGAGTGAATGCTTGTGTGCTTCCCAAATTTCGTATGTTGAAACTATAATCCCAATGTGATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000606251.2 ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 72 bp | CTAGAGTTCATGAGACCCTTTTATGTCAAACTCTCTTaGCTAAGATATGGATCATCAGTCATTCAGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LEFMRPFYVKLS*LRYGSSVIQKS Trigger: TGACTTCTGAATGACTGATGATCCATATCTTAGCAAAGAGAGTTTGACATAAAAGGGTCTCATGAACTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS TCA 72 bp | AGCTCTTGTGAAAGATTCTTAGGGAAAAGAATAACATaGACGTTAGGATGGCCTTTGTTTGTAGATTGGATT | + |
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Preference number: 6 (lower is better) Translates to: SSCERFLGKRIT*TLGWPLFVDWI Trigger: AATCCAATCTACAAACAAAGGCCATCCTAACGTTCATGTTATTCTTTTCCCTAAGAATCTTTCACAAGAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499346.7 ENST00000514409.6 ENST00000661296.1 |
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| CDS TCA 72 bp | GCAAAGTTGCAATATGGAAATAGGAAAAGGCATTTCTaGATAAGGGGGATGTTTATTCAAGAGGTTGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: AKLQYGNRKRHF*IRGMFIQEVVL Trigger: TAACACAACCTCTTGAATAAACATCCCCCTTATTCAGAAATGCCTTTTCCTATTTCCATATTGCAACTTTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS TCA 72 bp | ATTTTTAGTATTAGAAGGGAGATTCTAATAAATCTATaGGGAGGAGCATCACCCCTTATTTGTAACCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: IFSIRREILINL*GGASPLICNLR Trigger: CCTGAGGTTACAAATAAGGGGTGATGCTCCTCCTCATAGATTTATTAGAATCTCCCTTCTAATACTAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CCA 72 bp | CCTTATTTTATTCAAGTATACTACAGAATCAGTGAGTaGTTTTCAGCTCTAAATTTACTCCCTCTGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: PYFIQVYYRISE*FSALNLLPLVI Trigger: GATCACCAGAGGGAGTAAATTTAGAGCTGAAAACCACTCACTGATTCTGTAGTATACTTGAATAAAATAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS CAA 72 bp | GTTCATAAAAGGCATTTAATACACCTTTTATTTAGTTaGTTGTGTGGGTCTCTTGTTTCTTCAGCAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: VHKRHLIHLLFS*LCGSLVSSAGL Trigger: GAGTCCTGCTGAAGAAACAAGAGACCCACACAACAAACTAAATAAAAGGTGTATTAAATGCCTTTTATGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656154.1 |
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| CDS TCA 72 bp | ATCCCATTTAATATAAACAACAACTCATCTTATGGATaGATACATGAAGGCTCAGAGACCACAAGTGACTTA | + |
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Preference number: 6 (lower is better) Translates to: IPFNINNNSSYG*IHEGSETTSDL Trigger: TAAGTCACTTGTGGTCTCTGAGCCTTCATGTATTCATCCATAAGATGAGTTGTTGTTTATATTAAATGGGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501702.7 ENST00000657683.1 ENST00000659415.1 ENST00000668265.1 ENST00000668567.1 |
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| CDS TCA 72 bp | TTGAATTGTACAGTGAACCACTGGGATAATTCAGGCTaGGTCCATAACCTCTTAATTATCTTTGATAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LNCTVNHWDNSG*VHNLLIIFDSL Trigger: TAAACTATCAAAGATAATTAAGAGGTTATGGACTCAGCCTGAATTATCCCAGTGGTTCACTGTACAATTCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000654888.1 ENST00000655628.1 ENST00000656154.1 ENST00000656563.1 ENST00000663841.1 ENST00000663976.1 ENST00000664006.1 |
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| CDS GCA 72 bp | CCAGGCATATCTGATCCTAAAAGTTACTTTTCACTATaGCATGATCCTGCTTACAAATGTATAGTTATACTA | + |
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Preference number: 6 (lower is better) Translates to: PGISDPKSYFSL*HDPAYKCIVIL Trigger: TAGTATAACTATACATTTGTAAGCAGGATCATGGCATAGTGAAAAGTAACTTTTAGGATCAGATATGCCTGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665302.1 |
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