Pregenerated sensors for LINC01181 (Homo sapiens)
Ensembl gene IDs: ENSG00000250929Ensembl transcript IDs: ENST00000503718.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | AGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTGAGGTCCTCTTaGAGGACGATCCCATTGCAGGAAAGCCACATGTGCTGTCCTGGT | + |
Preference number: 5 (lower is better) Translates to: SCLRHSPGGEPVRSS*RTIPLQESHMCCPG Trigger: ACCAGGACAGCACATGTGGCTTTCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS TCA 90 bp | AAGGCTGCTGCAGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTaGGGTCCTCTTGAAGGACGATCCCATTGCAGGAAAGCCACATGT | + |
Preference number: 5 (lower is better) Translates to: KAAAAAYVTVRVESL*GPLEGRSHCRKATC Trigger: ACATGTGGCTTTCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS CCA 90 bp | CAGAAACATCCAAGGCTGCTGCAGCTGCTTACGTCACAGTCCGGGTaGAGAGCCTGTGAGGTCCTCTTGAAGGACGATCCCATTGCAGGA | + |
Preference number: 5 (lower is better) Translates to: QKHPRLLQLLTSQSG*RACEVLLKDDPIAG Trigger: TCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS GCA 90 bp | TTAAAGCTGTTCTCATGGGGCTGGCTATCCAGAAACATCCAAGGCTaGTGCAGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTGAGG | + |
Preference number: 5 (lower is better) Translates to: LKLFSWGWLSRNIQG*CSCLRHSPGGEPVR Trigger: CCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS CCA 90 bp | CTCTTGAAGGACGATCCCATTGCAGGAAAGCCACATGTGCTGTCCTaGTTAAGACCTCCAAAAGCTTCCACTACCTCCAGGATAAATCCC | + |
Preference number: 5 (lower is better) Translates to: LLKDDPIAGKPHVLS*LRPPKASTTSRINP Trigger: GGGATTTATCCTGGAGGTAGTGGAAGCTTTTGGAGGTCTTAACCAGGACAGCACATGTGGCTTTCCTGCAATGGGATCGTCCTTCAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS CCA 90 bp | TCATCACAATGCCAGTCTCCTATTTTAAAGCTGTTCTCATGGGGCTaGCTATCCAGAAACATCCAAGGCTGCTGCAGCTGCTTACGTCAC | + |
Preference number: 5 (lower is better) Translates to: SSQCQSPILKLFSWG*LSRNIQGCCSCLRH Trigger: GTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS CCA 90 bp | CACACTTCATCACAATGCCAGTCTCCTATTTTAAAGCTGTTCTCATaGGGCTGGCTATCCAGAAACATCCAAGGCTGCTGCAGCTGCTTA | + |
Preference number: 5 (lower is better) Translates to: HTSSQCQSPILKLFS*GWLSRNIQGCCSCL Trigger: TAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGATGAAGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS GCA 90 bp | TTAAATCCAGGTCTATATGACAGCGAAGTCCACACTTCATCACAATaGCAGTCTCCTATTTTAAAGCTGTTCTCATGGGGCTGGCTATCC | + |
Preference number: 5 (lower is better) Translates to: LNPGLYDSEVHTSSQ*QSPILKLFSWGWLS Trigger: GGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGATGAAGTGTGGACTTCGCTGTCATATAGACCTGGATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS TCA 90 bp | TTTCTGCTGATGCCTGTATATGCAGGTGATCCCTTGCTGGGTCTCTaGAATGGGTTCATCTCTTCAAGGTTTTTACTGAGACGATATAGT | + |
Preference number: 5 (lower is better) Translates to: FLLMPVYAGDPLLGL*NGFISSRFLLRRYS Trigger: ACTATATCGTCTCAGTAAAAACCTTGAAGAGATGAACCCATTTCAGAGACCCAGCAAGGGATCACCTGCATATACAGGCATCAGCAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS TCA 90 bp | GACTTAAGGAGGTTAAATGACTTGTCCAACGTCATCCATAAACACTaGAGCCAGGATTTAAATCCAGGTCTATATGACAGCGAAGTCCAC | + |
Preference number: 5 (lower is better) Translates to: DLRRLNDLSNVIHKH*SQDLNPGLYDSEVH Trigger: GTGGACTTCGCTGTCATATAGACCTGGATTTAAATCCTGGCTTCAGTGTTTATGGATGACGTTGGACAAGTCATTTAACCTCCTTAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS CCA 72 bp | CCAAGGCTGCTGCAGCTGCTTACGTCACAGTCCGGGTaGAGAGCCTGTGAGGTCCTCTTGAAGGACGATCCC | + |
Preference number: 6 (lower is better) Translates to: PRLLQLLTSQSG*RACEVLLKDDP Trigger: GGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS TCA 72 bp | GCAGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTaGGGTCCTCTTGAAGGACGATCCCATTGCAGGAAA | + |
Preference number: 6 (lower is better) Translates to: AAAYVTVRVESL*GPLEGRSHCRK Trigger: TTTCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS GCA 72 bp | TTCTCATGGGGCTGGCTATCCAGAAACATCCAAGGCTaGTGCAGCTGCTTACGTCACAGTCCGGGTGGAGAG | + |
Preference number: 6 (lower is better) Translates to: FSWGWLSRNIQG*CSCLRHSPGGE Trigger: CTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS CCA 72 bp | GACGATCCCATTGCAGGAAAGCCACATGTGCTGTCCTaGTTAAGACCTCCAAAAGCTTCCACTACCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: DDPIAGKPHVLS*LRPPKASTTSR Trigger: CCTGGAGGTAGTGGAAGCTTTTGGAGGTCTTAACCAGGACAGCACATGTGGCTTTCCTGCAATGGGATCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS CCA 72 bp | TCACAATGCCAGTCTCCTATTTTAAAGCTGTTCTCATaGGGCTGGCTATCCAGAAACATCCAAGGCTGCTGC | + |
Preference number: 6 (lower is better) Translates to: SQCQSPILKLFS*GWLSRNIQGCC Trigger: GCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS TCA 72 bp | CAAATTCCTGTTTCTGCTGATGCCTGTATATGCAGGTaGTCCCTTGCTGGGTCTCTGAAATGGGTTCATCTC | + |
Preference number: 6 (lower is better) Translates to: QIPVSADACICR*SLAGSLKWVHL Trigger: GAGATGAACCCATTTCAGAGACCCAGCAAGGGATCACCTGCATATACAGGCATCAGCAGAAACAGGAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503718.2 |
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CDS TCA 72 bp | ATGCCTGTATATGCAGGTGATCCCTTGCTGGGTCTCTaGAATGGGTTCATCTCTTCAAGGTTTTTACTGAGA | + |
Preference number: 6 (lower is better) Translates to: MPVYAGDPLLGL*NGFISSRFLLR Trigger: TCTCAGTAAAAACCTTGAAGAGATGAACCCATTTCAGAGACCCAGCAAGGGATCACCTGCATATACAGGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000503718.2 |