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Pregenerated sensors for LINC01181 (Homo sapiens)

Ensembl gene IDs: ENSG00000250929

Ensembl transcript IDs: ENST00000503718.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTGAGGTCCTCTTaGAGGACGATCCCATTGCAGGAAAGCCACATGTGCTGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SCLRHSPGGEPVRSS*RTIPLQESHMCCPG
Trigger: ACCAGGACAGCACATGTGGCTTTCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS TCA 90 bp AAGGCTGCTGCAGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTaGGGTCCTCTTGAAGGACGATCCCATTGCAGGAAAGCCACATGT +
Preference number: 5 (lower is better)
Translates to: KAAAAAYVTVRVESL*GPLEGRSHCRKATC
Trigger: ACATGTGGCTTTCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS CCA 90 bp CAGAAACATCCAAGGCTGCTGCAGCTGCTTACGTCACAGTCCGGGTaGAGAGCCTGTGAGGTCCTCTTGAAGGACGATCCCATTGCAGGA +
Preference number: 5 (lower is better)
Translates to: QKHPRLLQLLTSQSG*RACEVLLKDDPIAG
Trigger: TCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS GCA 90 bp TTAAAGCTGTTCTCATGGGGCTGGCTATCCAGAAACATCCAAGGCTaGTGCAGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: LKLFSWGWLSRNIQG*CSCLRHSPGGEPVR
Trigger: CCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS CCA 90 bp CTCTTGAAGGACGATCCCATTGCAGGAAAGCCACATGTGCTGTCCTaGTTAAGACCTCCAAAAGCTTCCACTACCTCCAGGATAAATCCC +
Preference number: 5 (lower is better)
Translates to: LLKDDPIAGKPHVLS*LRPPKASTTSRINP
Trigger: GGGATTTATCCTGGAGGTAGTGGAAGCTTTTGGAGGTCTTAACCAGGACAGCACATGTGGCTTTCCTGCAATGGGATCGTCCTTCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS CCA 90 bp TCATCACAATGCCAGTCTCCTATTTTAAAGCTGTTCTCATGGGGCTaGCTATCCAGAAACATCCAAGGCTGCTGCAGCTGCTTACGTCAC +
Preference number: 5 (lower is better)
Translates to: SSQCQSPILKLFSWG*LSRNIQGCCSCLRH
Trigger: GTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS CCA 90 bp CACACTTCATCACAATGCCAGTCTCCTATTTTAAAGCTGTTCTCATaGGGCTGGCTATCCAGAAACATCCAAGGCTGCTGCAGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: HTSSQCQSPILKLFS*GWLSRNIQGCCSCL
Trigger: TAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGATGAAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS GCA 90 bp TTAAATCCAGGTCTATATGACAGCGAAGTCCACACTTCATCACAATaGCAGTCTCCTATTTTAAAGCTGTTCTCATGGGGCTGGCTATCC +
Preference number: 5 (lower is better)
Translates to: LNPGLYDSEVHTSSQ*QSPILKLFSWGWLS
Trigger: GGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGATGAAGTGTGGACTTCGCTGTCATATAGACCTGGATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS TCA 90 bp TTTCTGCTGATGCCTGTATATGCAGGTGATCCCTTGCTGGGTCTCTaGAATGGGTTCATCTCTTCAAGGTTTTTACTGAGACGATATAGT +
Preference number: 5 (lower is better)
Translates to: FLLMPVYAGDPLLGL*NGFISSRFLLRRYS
Trigger: ACTATATCGTCTCAGTAAAAACCTTGAAGAGATGAACCCATTTCAGAGACCCAGCAAGGGATCACCTGCATATACAGGCATCAGCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS TCA 90 bp GACTTAAGGAGGTTAAATGACTTGTCCAACGTCATCCATAAACACTaGAGCCAGGATTTAAATCCAGGTCTATATGACAGCGAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: DLRRLNDLSNVIHKH*SQDLNPGLYDSEVH
Trigger: GTGGACTTCGCTGTCATATAGACCTGGATTTAAATCCTGGCTTCAGTGTTTATGGATGACGTTGGACAAGTCATTTAACCTCCTTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS CCA 72 bp CCAAGGCTGCTGCAGCTGCTTACGTCACAGTCCGGGTaGAGAGCCTGTGAGGTCCTCTTGAAGGACGATCCC +
Preference number: 6 (lower is better)
Translates to: PRLLQLLTSQSG*RACEVLLKDDP
Trigger: GGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS TCA 72 bp GCAGCTGCTTACGTCACAGTCCGGGTGGAGAGCCTGTaGGGTCCTCTTGAAGGACGATCCCATTGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: AAAYVTVRVESL*GPLEGRSHCRK
Trigger: TTTCCTGCAATGGGATCGTCCTTCAAGAGGACCTCACAGGCTCTCCACCCGGACTGTGACGTAAGCAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS GCA 72 bp TTCTCATGGGGCTGGCTATCCAGAAACATCCAAGGCTaGTGCAGCTGCTTACGTCACAGTCCGGGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: FSWGWLSRNIQG*CSCLRHSPGGE
Trigger: CTCTCCACCCGGACTGTGACGTAAGCAGCTGCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS CCA 72 bp GACGATCCCATTGCAGGAAAGCCACATGTGCTGTCCTaGTTAAGACCTCCAAAAGCTTCCACTACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: DDPIAGKPHVLS*LRPPKASTTSR
Trigger: CCTGGAGGTAGTGGAAGCTTTTGGAGGTCTTAACCAGGACAGCACATGTGGCTTTCCTGCAATGGGATCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS CCA 72 bp TCACAATGCCAGTCTCCTATTTTAAAGCTGTTCTCATaGGGCTGGCTATCCAGAAACATCCAAGGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SQCQSPILKLFS*GWLSRNIQGCC
Trigger: GCAGCAGCCTTGGATGTTTCTGGATAGCCAGCCCCATGAGAACAGCTTTAAAATAGGAGACTGGCATTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS TCA 72 bp CAAATTCCTGTTTCTGCTGATGCCTGTATATGCAGGTaGTCCCTTGCTGGGTCTCTGAAATGGGTTCATCTC +
Preference number: 6 (lower is better)
Translates to: QIPVSADACICR*SLAGSLKWVHL
Trigger: GAGATGAACCCATTTCAGAGACCCAGCAAGGGATCACCTGCATATACAGGCATCAGCAGAAACAGGAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503718.2
CDS TCA 72 bp ATGCCTGTATATGCAGGTGATCCCTTGCTGGGTCTCTaGAATGGGTTCATCTCTTCAAGGTTTTTACTGAGA +
Preference number: 6 (lower is better)
Translates to: MPVYAGDPLLGL*NGFISSRFLLR
Trigger: TCTCAGTAAAAACCTTGAAGAGATGAACCCATTTCAGAGACCCAGCAAGGGATCACCTGCATATACAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503718.2