Pregenerated sensors for LINC01167 (Homo sapiens)

Ensembl gene IDs: ENSG00000224758

Ensembl transcript IDs: ENST00000423232.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTTGGAGTGCAGGCCTTTCTCCTTCACTCTTCCGCCTTAGGACGCTaGCCGTGTATGAGTGTCAGTGCACGGATGAGCGAGTGTGAGTGT	+
Preference number: 5 (lower is better) Translates to: LGVQAFLLHSSALGR*PCMSVSARMSECEC Trigger: ACACTCACACTCGCTCATCCGTGCACTGACACTCATACACGGCCAGCGTCCTAAGGCGGAAGAGTGAAGGAGAAAGGCCTGCACTCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423232.1
CDS CCA 90 bp	GGAGGACAGAATCACGTTGCTGATGGACGTCTTCTGAGAGAGGACTaGGACGCCATCATTCGAGTGAGGTTTGAGGTGGGAGTCGACTCC	+
Preference number: 5 (lower is better) Translates to: GGQNHVADGRLLRED*DAIIRVRFEVGVDS Trigger: GGAGTCGACTCCCACCTCAAACCTCACTCGAATGATGGCGTCCCAGTCCTCTCTCAGAAGACGTCCATCAGCAACGTGATTCTGTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423232.1
CDS TCA 72 bp	GCTGCCAGCTTGGCTGGGAGGACAGAATCACGTTGCTaGTGGACGTCTTCTGAGAGAGGACTGGGACGCCAT	+
Preference number: 6 (lower is better) Translates to: AASLAGRTESRC*WTSSERGLGRH Trigger: ATGGCGTCCCAGTCCTCTCTCAGAAGACGTCCATCAGCAACGTGATTCTGTCCTCCCAGCCAAGCTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423232.1
CDS TCA 72 bp	GAGAGAGGACTGGGACGCCATCATTCGAGTGAGGTTTaGGGTGGGAGTCGACTCCAGAGGCAGTACTTGGAC	+
Preference number: 6 (lower is better) Translates to: ERGLGRHHSSEV*GGSRLQRQYLD Trigger: GTCCAAGTACTGCCTCTGGAGTCGACTCCCACCTCAAACCTCACTCGAATGATGGCGTCCCAGTCCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423232.1
CDS GCA 72 bp	GAGTTCAGTGTGTGTGTGAGCAAGTGTGTGTGTGCCTaGGTGAGTGTGCACAACAGTCGGCCTCTCCACGTG	+
Preference number: 6 (lower is better) Translates to: EFSVCVSKCVCA*VSVHNSRPLHV Trigger: CACGTGGAGAGGCCGACTGTTGTGCACACTCACGCAGGCACACACACACTTGCTCACACACACACTGAACTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423232.1
CDS CCA 72 bp	AATCACGTTGCTGATGGACGTCTTCTGAGAGAGGACTaGGACGCCATCATTCGAGTGAGGTTTGAGGTGGGA	+
Preference number: 6 (lower is better) Translates to: NHVADGRLLRED*DAIIRVRFEVG Trigger: TCCCACCTCAAACCTCACTCGAATGATGGCGTCCCAGTCCTCTCTCAGAAGACGTCCATCAGCAACGTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423232.1
CDS CAA 90 bp	CCAGCTAACGACGTCAGCAAACGTCTTGGAAAATTTGGAAACGTGTaGACCGGGTTGGCTGTAATTTATTTCTGCTCCGGCGATCCCCCA	+
Preference number: 6 (lower is better) Translates to: PANDVSKRLGKFGNV*TGLAVIYFCSGDPP Trigger: TGGGGGATCGCCGGAGCAGAAATAAATTACAGCCAACCCGGTCAACACGTTTCCAAATTTTCCAAGACGTTTGCTGACGTCGTTAGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423232.1
CDS CAA 72 bp	GACGTCAGCAAACGTCTTGGAAAATTTGGAAACGTGTaGACCGGGTTGGCTGTAATTTATTTCTGCTCCGGC	+
Preference number: 6 (lower is better) Translates to: DVSKRLGKFGNV*TGLAVIYFCSG Trigger: GCCGGAGCAGAAATAAATTACAGCCAACCCGGTCAACACGTTTCCAAATTTTCCAAGACGTTTGCTGACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423232.1

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