Pregenerated sensors for LINC01166 (Homo sapiens)
Ensembl gene IDs: ENSG00000232903Ensembl transcript IDs: ENST00000443633.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCGACCTGCACCGCTGTCCCAGGGGCCTGTGCTCTCCTCACTCTaGCTGGCTGGTGTCTGGCCCGGCAGTGCTTTGTGGCATCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SRPAPLSQGPVLSSL*LAGVWPGSALWHRL Trigger: GAGCCGATGCCACAAAGCACTGCCGGGCCAGACACCAGCCAGGCAGAGTGAGGAGAGCACAGGCCCCTGGGACAGCGGTGCAGGTCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 90 bp | GGAGCGTATCAGCAACCTGGCAGCCGAGCTCCCGCGTCTCCAGGATaGCGGCCGAGGGTGGTGTGCACATGCCCTTCCCTCCGTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GAYQQPGSRAPASPG*RPRVVCTCPSLRSH Trigger: GTGGGAACGGAGGGAAGGGCATGTGCACACCACCCTCGGCCGTCATCCTGGAGACGCGGGAGCTCGGCTGCCAGGTTGCTGATACGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 90 bp | GCCTGTGCTCTCCTCACTCTGCCTGGCTGGTGTCTGGCCCGGCAGTaGTTTGTGGCATCGGCTCCACTTTGGGGCCAGTCGGTGCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: ACALLTLPGWCLARQ*FVASAPLWGQSVPA Trigger: TGCCGGCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGGCCAGACACCAGCCAGGCAGAGTGAGGAGAGCACAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 90 bp | TCTGTGTCTGGGCTCCCAGGCTGGACCCCAGAGGCCTGCTGTATATaGGCCCGCTGGCGTTGCCATCACGGGGCACTCTCATGGGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: SVSGLPGWTPEACCI*ARWRCHHGALSWAA Trigger: AGCCGCCCATGAGAGTGCCCCGTGATGGCAACGCCAGCGGGCGCATATACAGCAGGCCTCTGGGGTCCAGCCTGGGAGCCCAGACACAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 90 bp | GCGGGAAAGGAGGCGGGAAGGCCGAGAACAAGGTGCGGCCGGAGTTaGTTCCTTGGAGGGCACCCCGCGTGGCCGTATGTGGTCGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGKEAGRPRTRCGRS*FLGGHPAWPYVVVF Trigger: GAAGACGACCACATACGGCCACGCGGGGTGCCCTCCAAGGAACCAACTCCGGCCGCACCTTGTTCTCGGCCTTCCCGCCTCCTTTCCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 90 bp | AGGGCTCCTCACCCCCACGGACACCTTTCCCGGTGGGACAGCTCCTaGACATGGAGCGTATCAGCAACCTGGCAGCCGAGCTCCCGCGTC | + |
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Preference number: 5 (lower is better) Translates to: RAPHPHGHLSRWDSS*TWSVSATWQPSSRV Trigger: GACGCGGGAGCTCGGCTGCCAGGTTGCTGATACGCTCCATGTTCAGGAGCTGTCCCACCGGGAAAGGTGTCCGTGGGGGTGAGGAGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 90 bp | GACTGGGCCCGCAGGAGAATGTTGGCCCAGGGAACCAGGAAGAACTaGCCTAGAGTCGGGAGAGACCCCAGGCCACCTTTGTGTGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: DWARRRMLAQGTRKN*PRVGRDPRPPLCVG Trigger: CCCAACACACAAAGGTGGCCTGGGGTCTCTCCCGACTCTAGGTCAGTTCTTCCTGGTTCCCTGGGCCAACATTCTCCTGCGGGCCCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 90 bp | GGGCACCACCCTCCTGGCCCGTGGATGTGTTCAGCAACCTGGAACTaGTCGGGACCCATAGTCCAGGCATTCTTATGGAGGCTCCATCGC | + |
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Preference number: 5 (lower is better) Translates to: GHHPPGPWMCSATWN*SGPIVQAFLWRLHR Trigger: GCGATGGAGCCTCCATAAGAATGCCTGGACTATGGGTCCCGAGCAGTTCCAGGTTGCTGAACACATCCACGGGCCAGGAGGGTGGTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 90 bp | GCGGCCGGAGTTGGTTCCTTGGAGGGCACCCCGCGTGGCCGTATGTaGTCGTCTTCTTGTCTGTGTCTCGGTGTCCAAATGTGCCCATCT | + |
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Preference number: 5 (lower is better) Translates to: AAGVGSLEGTPRGRM*SSSCLCLGVQMCPS Trigger: AGATGGGCACATTTGGACACCGAGACACAGACAAGAAGACGACCACATACGGCCACGCGGGGTGCCCTCCAAGGAACCAACTCCGGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 90 bp | CCCGGCAGTGCTTTGTGGCATCGGCTCCACTTTGGGGCCAGTCGGTaGCGGCACGGCTACTTTACCTATGGCTTGAGAATCCAAGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PGSALWHRLHFGASR*RHGYFTYGLRIQVW Trigger: CCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 90 bp | CGGTGCCGGCACGGCTACTTTACCTATGGCTTGAGAATCCAAGTGTaGAGTCTGGGAAAGGGGGCTGGGCTGGAATCCCCACGTGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RCRHGYFTYGLRIQV*SLGKGAGLESPRVR Trigger: CCTCACACGTGGGGATTCCAGCCCAGCCCCCTTTCCCAGACTCCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 90 bp | GCTCCACTTTGGGGCCAGTCGGTGCCGGCACGGCTACTTTACCTATaGCTTGAGAATCCAAGTGTGGAGTCTGGGAAAGGGGGCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: APLWGQSVPARLLYL*LENPSVESGKGGWA Trigger: AGCCCAGCCCCCTTTCCCAGACTCCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCAAAGTGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 90 bp | GCAGGGTTGAGAGCTGCAGGTGCTAATCCTGGCTGGTCTCTCTGGTaGCTGGACCCCCTCCAGGAGCCACCAAGCCTCACCTCATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: AGLRAAGANPGWSLW*LDPLQEPPSLTSFE Trigger: TTCAAATGAGGTGAGGCTTGGTGGCTCCTGGAGGGGGTCCAGTCACCAGAGAGACCAGCCAGGATTAGCACCTGCAGCTCTCAACCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 90 bp | ACTTTGGGGCCAGTCGGTGCCGGCACGGCTACTTTACCTATGGCTTaGGAATCCAAGTGTGGAGTCTGGGAAAGGGGGCTGGGCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: TLGPVGAGTATLPMA*ESKCGVWERGLGWN Trigger: ATTCCAGCCCAGCCCCCTTTCCCAGACTCCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 90 bp | GGGACCCATAGTCCAGGCATTCTTATGGAGGCTCCATCGCAGACATaGAGGATGATGGTGGATGATCCCTGGAGGAGGGTGGGTGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GTHSPGILMEAPSQT*RMMVDDPWRRVGAG Trigger: CCCTGCACCCACCCTCCTCCAGGGATCATCCACCATCATCCTTCATGTCTGCGATGGAGCCTCCATAAGAATGCCTGGACTATGGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 90 bp | AAGCATGATCATGTGTGTGACCATGTGTCTGAGTGTGCATGTGTATaGATGTGTGGCCCTCCCCTGTGGAGGCACAGGGGAGCAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: KHDHVCDHVSECACV*MCGPPLWRHRGAGL Trigger: GAGACCTGCTCCCCTGTGCCTCCACAGGGGAGGGCCACACATGCATACACATGCACACTCAGACACATGGTCACACACATGATCATGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 90 bp | CGTCTTCTTGTCTGTGTCTCGGTGTCCAAATGTGCCCATCTTATATaGACACCAGCCATGGGGTTTAGGGCCCACCCTGGGACCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: RLLVCVSVSKCAHLI*TPAMGFRAHPGTSC Trigger: ACAGGAGGTCCCAGGGTGGGCCCTAAACCCCATGGCTGGTGTCCATATAAGATGGGCACATTTGGACACCGAGACACAGACAAGAAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 90 bp | CTGGTTGGAAGCATTTGCACATCCTCCCACCACCGCTGTTTAAACTaGCCCAGGGGCAGCACCAGCTCACAAAGCTGCACATCTCACAAA | + |
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Preference number: 5 (lower is better) Translates to: LVGSICTSSHHRCLN*PRGSTSSQSCTSHK Trigger: TTTGTGAGATGTGCAGCTTTGTGAGCTGGTGCTGCCCCTGGGGCAGTTTAAACAGCGGTGGTGGGAGGATGTGCAAATGCTTCCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 90 bp | GAATGGAAGAATCTGCTGCCATCACCCAGGAAATTCGAGGGCTTTTaGAGCCCTGTGCGGGGTCTCGGGAGCAGAGACCAGATCTATTCA | + |
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Preference number: 5 (lower is better) Translates to: EWKNLLPSPRKFEGF*SPVRGLGSRDQIYS Trigger: TGAATAGATCTGGTCTCTGCTCCCGAGACCCCGCACAGGGCTCCAAAAGCCCTCGAATTTCCTGGGTGATGGCAGCAGATTCTTCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 90 bp | ATCTGCTGCCATCACCCAGGAAATTCGAGGGCTTTTGGAGCCCTGTaGGGGGTCTCGGGAGCAGAGACCAGATCTATTCATTTCTCATTT | + |
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Preference number: 5 (lower is better) Translates to: ICCHHPGNSRAFGAL*GVSGAETRSIHFSF Trigger: AAATGAGAAATGAATAGATCTGGTCTCTGCTCCCGAGACCCCGCACAGGGCTCCAAAAGCCCTCGAATTTCCTGGGTGATGGCAGCAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 90 bp | GTGCTCTCCTCACTCTGCCTGGCTGGTGTCTGGCCCGGCAGTGCTTaGTGGCATCGGCTCCACTTTGGGGCCAGTCGGTGCCGGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: VLSSLCLAGVWPGSA*WHRLHFGASRCRHG Trigger: GCCGTGCCGGCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGGCCAGACACCAGCCAGGCAGAGTGAGGAGAGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | GCACCGCTGTCCCAGGGGCCTGTGCTCTCCTCACTCTaGCTGGCTGGTGTCTGGCCCGGCAGTGCTTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: APLSQGPVLSSL*LAGVWPGSALW Trigger: CCACAAAGCACTGCCGGGCCAGACACCAGCCAGGCAGAGTGAGGAGAGCACAGGCCCCTGGGACAGCGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | ACAGCGGGAAAGGAGGCGGGAAGGCCGAGAACAAGGTaGGGCCGGAGTTGGTTCCTTGGAGGGCACCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: TAGKEAGRPRTR*GRSWFLGGHPA Trigger: CGCGGGGTGCCCTCCAAGGAACCAACTCCGGCCGCACCTTGTTCTCGGCCTTCCCGCCTCCTTTCCCGCTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | GGGCTCCCAGGCTGGACCCCAGAGGCCTGCTGTATATaGGCCCGCTGGCGTTGCCATCACGGGGCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GLPGWTPEACCI*ARWRCHHGALS Trigger: TGAGAGTGCCCCGTGATGGCAACGCCAGCGGGCGCATATACAGCAGGCCTCTGGGGTCCAGCCTGGGAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | CTCTGCCTGGCTGGTGTCTGGCCCGGCAGTGCTTTGTaGCATCGGCTCCACTTTGGGGCCAGTCGGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LCLAGVWPGSAL*HRLHFGASRCR Trigger: CCGGCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGGCCAGACACCAGCCAGGCAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | GGCTGGACCCCAGAGGCCTGCTGTATATGCGCCCGCTaGCGTTGCCATCACGGGGCACTCTCATGGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: GWTPEACCICAR*RCHHGALSWAA Trigger: AGCCGCCCATGAGAGTGCCCCGTGATGGCAACGCCAGCGGGCGCATATACAGCAGGCCTCTGGGGTCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 72 bp | GGGGCTGGGCTGGAATCCCCACGTGTGAGGGCTGACTaGGACTGGGCCCGCAGGAGAATGTTGGCCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GAGLESPRVRAD*DWARRRMLAQG Trigger: TCCCTGGGCCAACATTCTCCTGCGGGCCCAGTCTCAGTCAGCCCTCACACGTGGGGATTCCAGCCCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | GCCGAGCTCCCGCGTCTCCAGGATGACGGCCGAGGGTaGTGTGCACATGCCCTTCCCTCCGTTCCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: AELPRLQDDGRG*CAHALPSVPTS Trigger: AGAAGTGGGAACGGAGGGAAGGGCATGTGCACACCACCCTCGGCCGTCATCCTGGAGACGCGGGAGCTCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 90 bp | AGCGGGAAAGGAGGCGGGAAGGCCGAGAACAAGGTGCGGCCGGAGTaGGTTCCTTGGAGGGCACCCCGCGTGGCCGTATGTGGTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SGKGGGKAENKVRPE*VPWRAPRVAVCGRL Trigger: AAGACGACCACATACGGCCACGCGGGGTGCCCTCCAAGGAACCAACTCCGGCCGCACCTTGTTCTCGGCCTTCCCGCCTCCTTTCCCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | CTCCTCACTCTGCCTGGCTGGTGTCTGGCCCGGCAGTaGTTTGTGGCATCGGCTCCACTTTGGGGCCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: LLTLPGWCLARQ*FVASAPLWGQS Trigger: CGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGGCCAGACACCAGCCAGGCAGAGTGAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 72 bp | TCACTCTGCCTGGCTGGTGTCTGGCCCGGCAGTGCTTaGTGGCATCGGCTCCACTTTGGGGCCAGTCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SLCLAGVWPGSA*WHRLHFGASRC Trigger: GCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGGCCAGACACCAGCCAGGCAGAGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 90 bp | CCCAGGCTGGACCCCAGAGGCCTGCTGTATATGCGCCCGCTGGCGTaGCCATCACGGGGCACTCTCATGGGCGGCTTAAACAGCGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PRLDPRGLLYMRPLA*PSRGTLMGGLNSGK Trigger: TTTCCCGCTGTTTAAGCCGCCCATGAGAGTGCCCCGTGATGGCAACGCCAGCGGGCGCATATACAGCAGGCCTCTGGGGTCCAGCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 72 bp | CCCCAGGCCACCTTTGTGTGTTGGGCCACGCAGTGGTaGAGACCATGGGGTGGCCACCCAGCTACGGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: PQATFVCWATQW*RPWGGHPATVG Trigger: ACCAACCGTAGCTGGGTGGCCACCCCATGGTCTTCACCACTGCGTGGCCCAACACACAAAGGTGGCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | CTGGCCCGGCAGTGCTTTGTGGCATCGGCTCCACTTTaGGGCCAGTCGGTGCCGGCACGGCTACTTTACCTA | + |
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Preference number: 6 (lower is better) Translates to: LARQCFVASAPL*GQSVPARLLYL Trigger: TAGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 72 bp | TCTGGCCCGGCAGTGCTTTGTGGCATCGGCTCCACTTaGGGGCCAGTCGGTGCCGGCACGGCTACTTTACCT | + |
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Preference number: 6 (lower is better) Translates to: SGPAVLCGIGST*GPVGAGTATLP Trigger: AGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGCACTGCCGGGCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 72 bp | GACCCCAGAGGCCTGCTGTATATGCGCCCGCTGGCGTaGCCATCACGGGGCACTCTCATGGGCGGCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: DPRGLLYMRPLA*PSRGTLMGGLN Trigger: GTTTAAGCCGCCCATGAGAGTGCCCCGTGATGGCAACGCCAGCGGGCGCATATACAGCAGGCCTCTGGGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | CTGCAGGTGCTAATCCTGGCTGGTCTCTCTGGTGACTaGACCCCCTCCAGGAGCCACCAAGCCTCACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LQVLILAGLSGD*TPSRSHQASPH Trigger: ATGAGGTGAGGCTTGGTGGCTCCTGGAGGGGGTCCAGTCACCAGAGAGACCAGCCAGGATTAGCACCTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 72 bp | CGCAGGAGAATGTTGGCCCAGGGAACCAGGAAGAACTaGCCTAGAGTCGGGAGAGACCCCAGGCCACCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RRRMLAQGTRKN*PRVGRDPRPPL Trigger: CAAAGGTGGCCTGGGGTCTCTCCCGACTCTAGGTCAGTTCTTCCTGGTTCCCTGGGCCAACATTCTCCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 90 bp | CACTTTGGGGCCAGTCGGTGCCGGCACGGCTACTTTACCTATGGCTaGAGAATCCAAGTGTGGAGTCTGGGAAAGGGGGCTGGGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HFGASRCRHGYFTYG*RIQVWSLGKGAGLE Trigger: TTCCAGCCCAGCCCCCTTTCCCAGACTCCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCAAAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 72 bp | CCAGTCGGTGCCGGCACGGCTACTTTACCTATGGCTTaGGAATCCAAGTGTGGAGTCTGGGAAAGGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PVGAGTATLPMA*ESKCGVWERGL Trigger: CAGCCCCCTTTCCCAGACTCCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | GCTTTGTGGCATCGGCTCCACTTTGGGGCCAGTCGGTaGCGGCACGGCTACTTTACCTATGGCTTGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: ALWHRLHFGASR*RHGYFTYGLRI Trigger: GATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCAAAGTGGAGCCGATGCCACAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | CCTCCTGGCCCGTGGATGTGTTCAGCAACCTGGAACTaGTCGGGACCCATAGTCCAGGCATTCTTATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PPGPWMCSATWN*SGPIVQAFLWR Trigger: CCTCCATAAGAATGCCTGGACTATGGGTCCCGAGCAGTTCCAGGTTGCTGAACACATCCACGGGCCAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | TGGGGCCAGTCGGTGCCGGCACGGCTACTTTACCTATaGCTTGAGAATCCAAGTGTGGAGTCTGGGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: WGQSVPARLLYL*LENPSVESGKG Trigger: CCCTTTCCCAGACTCCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | CACCACCCTCCTGGCCCGTGGATGTGTTCAGCAACCTaGAACTGCTCGGGACCCATAGTCCAGGCATTCTTA | + |
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Preference number: 6 (lower is better) Translates to: HHPPGPWMCSAT*NCSGPIVQAFL Trigger: TAAGAATGCCTGGACTATGGGTCCCGAGCAGTTCCAGGTTGCTGAACACATCCACGGGCCAGGAGGGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 72 bp | GCCAGTCGGTGCCGGCACGGCTACTTTACCTATGGCTaGAGAATCCAAGTGTGGAGTCTGGGAAAGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ASRCRHGYFTYG*RIQVWSLGKGA Trigger: AGCCCCCTTTCCCAGACTCCACACTTGGATTCTCAAGCCATAGGTAAAGTAGCCGTGCCGGCACCGACTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | CATGTGTGTGACCATGTGTCTGAGTGTGCATGTGTATaGATGTGTGGCCCTCCCCTGTGGAGGCACAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: HVCDHVSECACV*MCGPPLWRHRG Trigger: TCCCCTGTGCCTCCACAGGGGAGGGCCACACATGCATACACATGCACACTCAGACACATGGTCACACACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | AGCATTTGCACATCCTCCCACCACCGCTGTTTAAACTaGCCCAGGGGCAGCACCAGCTCACAAAGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: SICTSSHHRCLN*PRGSTSSQSCT Trigger: TGTGCAGCTTTGTGAGCTGGTGCTGCCCCTGGGGCAGTTTAAACAGCGGTGGTGGGAGGATGTGCAAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 90 bp | TCTGGTGACTGGACCCCCTCCAGGAGCCACCAAGCCTCACCTCATTaGAATGGAAGAATCTGCTGCCATCACCCAGGAAATTCGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGDWTPSRSHQASPH*NGRICCHHPGNSRA Trigger: AGCCCTCGAATTTCCTGGGTGATGGCAGCAGATTCTTCCATTCAAATGAGGTGAGGCTTGGTGGCTCCTGGAGGGGGTCCAGTCACCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | CCCCTCCAGGAGCCACCAAGCCTCACCTCATTTGAATaGAAGAATCTGCTGCCATCACCCAGGAAATTCGAG | + |
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Preference number: 6 (lower is better) Translates to: PLQEPPSLTSFE*KNLLPSPRKFE Trigger: CTCGAATTTCCTGGGTGATGGCAGCAGATTCTTCCATTCAAATGAGGTGAGGCTTGGTGGCTCCTGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CAA 90 bp | GGAGCAGAGACCAGATCTATTCATTTCTCATTTCATCACCCCATCTaGCCAGGTAGAGACGGTGTCTGTGTCTGGGCTCCCAGGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GAETRSIHFSFHHPI*PGRDGVCVWAPRLD Trigger: GTCCAGCCTGGGAGCCCAGACACAGACACCGTCTCTACCTGGCAAGATGGGGTGATGAAATGAGAAATGAATAGATCTGGTCTCTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS TCA 72 bp | CCCACTGGTGTGTATGTCCGTAAAAGAGAACTTAGTTaGAATCGACCTGGCATCCCAGCTCCTGGGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: PTGVYVRKRELS*NRPGIPAPGDR Trigger: CCTGTCCCCAGGAGCTGGGATGCCAGGTCGATTTCAACTAAGTTCTCTTTTACGGACATACACACCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS CCA 72 bp | TGTCCAAATGTGCCCATCTTATATGGACACCAGCCATaGGGTTTAGGGCCCACCCTGGGACCTCCTGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: CPNVPILYGHQP*GLGPTLGPPVK Trigger: TTTAACAGGAGGTCCCAGGGTGGGCCCTAAACCCCATGGCTGGTGTCCATATAAGATGGGCACATTTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | CACCAAGCCTCACCTCATTTGAATGGAAGAATCTGCTaGCATCACCCAGGAAATTCGAGGGCTTTTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: HQASPHLNGRIC*HHPGNSRAFGA Trigger: GGCTCCAAAAGCCCTCGAATTTCCTGGGTGATGGCAGCAGATTCTTCCATTCAAATGAGGTGAGGCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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| CDS GCA 72 bp | AGCCACCAAGCCTCACCTCATTTGAATGGAAGAATCTaGTGCCATCACCCAGGAAATTCGAGGGCTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SHQASPHLNGRI*CHHPGNSRAFG Trigger: TCCAAAAGCCCTCGAATTTCCTGGGTGATGGCAGCAGATTCTTCCATTCAAATGAGGTGAGGCTTGGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443633.1 |
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